These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9599#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 1002 fasta sequence [CTGTTGGCCTACTGGAGTCGC-ACTGAACCGTCGAAGGGTTTGTATCGCTTCTTTCGGCGTTATTGTACCGTACTTGTGTGGCCAGTAAGTGTCAAATAGAACATTCCAAACG-ATAGCACGATGGAACGCTGGCGTGGCAAGGTGGCCATTGTGACCGGTGCTAGCTCCGGCATTGGGGCAGCAACGGTGAAAGCTCTCGCCAGTGCCGGTATGATCACGTTCGGCTTGGCCCGCCGTGTCGAACGGGTGGAAGCACTGAAGGACGAG-CTGCCGGAGGATGCCCGCGAGCG-GCTGCACGCACTGCGCTGTGACGTTACGAAGGAGGAGGACATTTTGGCCGCCTTCCGGGAGGTCGAACAACGGTGCGGCGGTGTCGATGTGCTGATCAACAATGCCGGCGTGGCGCGATCGAGTGTCGGCGTGCTGGATGCGAAAAATACGCAGGAGTTGCGCGACGTGATCGACACGAATCTGGTCGGGTTGGCGCTGTGCAGCC-GGGAGGCG-TATCAATCGATGAAGAAACGGTCGGTCGATGGGCACATTGTGCACATTAACAGCATACTGGGACACAAGGTGATCCCGATGAACACGCTCAATGTGTATCCGGCCACCAAGTACGGTGTGACCGCGCTGACGGAGACA-ATGCGGCACGAGCTGCGAATGGCGGGGACGAAAATCAAAGTCACGAGCATCAGTCCCGGTCTGGTAAGGACGGAGATCATCGGTAACAGTGGTGTGCTCAACGATATGCCCATACTCGAACCGGAAGACATCGCGAACGGCATTCTGTACGTGCTCGGCACCCCACCGCGTGTACAGGTGCACGAGCTAATGATCAAACCGGTCGGTGAATCGCTCGGATAAGTCACCACGAACCGAAATTCGATGAAGCAATCGATCCCAGAAATAAAGAAAGTGTTAATAAAATACCATTTGGTACACATTTTGGAATAAATAGTTCGGTACAAATATAAAACGAGACAAAAAAAAAAAAAAAAAACA] [-] EMBL CNS09MPP [CTGTTGGCCTACTGGAGTCGCAACTGAACCGTCGAAGGGTTTGTATCGCTTCTTTCGGCGTTATTGTACCGTACTTGTGTGGCCAGTAAGTGTCAAATAGAACATTCCAAACG ATAGCACGATGGAACGCTGGCGTGGCAAGGTGGCCATTGTGACCGGTGCTAGCTCCGGCATTGGGGCAGCAACGGTGAAAGCTCTCGCCAGTGCCGGTATGATCACGTTCGGCTTGGCCCGCCGTGTCGAACGGGTGGAAGCACTGAAGGACGTGTCTGCCGGAGGATGCCCGCGAGCG GCTGCACGCACTGCGCTGTGACGTTACGAAGGAGGAGGACATTTTGGCCGCCTTCCGGGAGGTCGAACAACGGTGCGGCGGTGTCGATGTGCTGATCAACAATGCCGGCGTGGCGCGATCGAGTGTCGGCGTGCTGGATGCGAAAAATACGCAGGAGTTGCGCGACGTGATCGACACGAATCTGGTCGGGTTGGCGCTGTGCAGCC GGGAGGCG TATCAATCGATGAAGAAGCGGTCGGCCGATGGGCACATTGTGCACATTAACAGCATACTGGGACACAAGGTGATCCCGATGAACACGCTCAATGTGTATCCGGCCACCAAGTACGGTGTGACCGCGCTGACGGAGACA ATGCGGCACGAGCTGCGAATGGCGGGGACGAAAATCAAAGTCACGAGCATCAGTCCCGGTCTGGTAAGGACGGAGATCATCGGTAACAGTGGTGTGCTCAACGATATGCCCATACTCGAACCGGAAGACATCGCGAACGGCATTCTGTACGTGCTCGGCACCCCACCGCGTGTACAGGTGCACGAGCTAATGATCAAACCGGTCGGTGAATCGCTCGGATAAGTCACCACGAACCGAAATTCGATGAAGCAATCGATCCCAGAAATAAAGAAAGTGTTAATAAAATACCATTTGGTACACATTTTGta ] [+] EMBL CNS094GR [ CTGGAGTCGC TCTGAACCGTCG AGGGTTTGTATCGCTTCTTTCGGCGTTATTGTACCGTACTTGTGTGGCCAGTAAGTGTCAAATAGAACATTCCAAACGCATAGCACGATGGAACGCTGGCGTGGCAAGGTGGCCATTGTGACCGGTGCTAGCTCCGGCATTGGGGCAGCAACGGTGAAAGCTCTCGCCAGTGCCGGTATGATCACGTTCGGCTTGGCCCGCCGTGTCGAACGGGTGGAAGCACTGAAGGACGAG CTGCCGGAGGATGCCCGCGAGCG GCTGCACGCACTGCGCTGTGACGTTACGAAGGAGGAGGACATTTTGGCCGCCTTCCGGGAGGTCGAACAACGGTGCGGCGGTGTCGATGTGCTGATCAACAATGCCGGCGTGGCGCGATCGAGTGTCGGCGTGCTGGATGCGAAAAATACGCAGGAGTTGCGCGACGTGATCGACACGAATCTGGTCGGGTTGGCGCTGTGCAGCC GGGAGGCG TATCAATCGATGAAGAAACGGTCGGTCGATGGGCACATTGTGCACATTAACAGCATACTGGGACACAAGGTGATCCCGATGAACACGCTCAATGTGTATCCGGCCACCAAGTACGGTGTGACCGCGCTGACGGAGACA ATGCGGCACGAGCTGCGAATGGCGGGGACGAAAATCAAAGTCACGAGCATCAGTCCCGGTCTGGTAAGGACGGAGATCATCGGTAACAGTGGTGTGCTCAACGATATGCCCATACTCGAACCGGAAGACATCGCGAACGGCATTCTGTACGTGCTCGGCACCCCACCGCGTGTACAGGTGCACGAGCTAATGATCAAACCGGTCGGTGAATCGCTCGGATAAGTCACCACGAACCGAAATTCGATGAAGCAATCGATCCCAGAAATAAAGAAAGTGTTAATAAAATACC ] [+] EMBL CNS099KF [ ACTGAACCGTCGAAGGGTTTGTATCGCTTCTTTCGGCGTTATTGTACCGTACTTGTGTGGCCAGTAAGTGTCAAATAGAACATTCCAAACG ATAGCACGATGGAACGCTGGCGTGGCAAGGTGGCCATTGTGACCGGTGCTAGCTCCGGCATTGGGGCAGCAACGGTGAAAGCTCTCGCCAGTGCCGGTATGATCACGTTCGGCTTGGCCCGCCGTGTCGAACGGGTGGAAGCACTGAAGGACGAG CTGCCGGAGGATGCCCGCGAGCGCGCTGCACGCACTGCGCTGTGACGTTACGAAGGAGGAGGACATTTTGGCCGCCTTCCGGGAGGTCGAACAACGGTGCGGCGGTGTCGATGTGCTGATAAAAAA ] [+] EMBL CNS09MKO [ cAACCGTCGAAGGGTTTGTATCGCTTCTTTCGGCGTTATTGTACCGTACTTGTGTGGCCAGTAAGTGTCAAATAGAACATTCCAAACG ATAGCACGATGGAACGCTGGCGTGGCAGGGTGGCCATTGTGACCGGTGCTAGCTCCGGCATTGGGGCAGCAACGGTGAAAGCTCTCGCCAGTGCCGGTATGATCACGTTCGGCTTGGCCCGCCGTGTCGAACGGGTGGAAGCACTGAAGGACGAG CTGCCGGAGGATGCCCGCGAGCG GCTGCACGCACTGCGCTGTGACGTTACGAAGGAGGAGGACATTTTGGCCGCCTTCCGGGAGGTCGAACAACGGTGCGGCGGTGTCGATGTGCTGATCAACAATGCCGGCGTGGCGCGATCGAGTGTCGGCGTGCTGGATGCGAAAAATACGCAGGAGTTGCGCGACGTGATCGACACGAATCTGGTCGGGTTGGCGCTGTGCAGCC GGGAGGCGTTATCAATCGATGAAGAAACGGTCGGTCGGTGGGCACATTGTTCA ] [-] EMBL CNS09L3R [ CGTCGAAGGGTTTTTATCGCTTCTTTCGGCGTTATTGTACCGTACTTGTGTGGCCAGTAAGTGTCAAATAGAACATTCCAAACG ATAGCACGATGGAACGCTGGCGTGGCAAGGTGGCCATTGTGACCGGTGCTAGCTCCGGCATTGGGGCAGCAACGGTGAAAGCTCTCGCCAGTGCCGGTATGATCACGTTCGGCTTGGCCCGCCGTGTCGAACGGGTGGAAGCACTGAAGGACGAG CTGCCGGAGGATGCCCGCGAGCG GCTGCACGCACTGCGCTGTGACGTTACGAAGGAGGAGGACATTTTGGCCGCCTTCCGGGAGGTCGAACAACGGTGCGGCGGTGTCGATGTGCTGATCAACAATGCCGGCGTGGCGCGATCGAGTGTCGGCGTGCTGGATGCGAAAAATACGCAGGAGTTGCGCGACGTGATCGACACGAATCTGGTCGGGTTGGCGCTGTGCAGCC GGGAGGCG TATCAATCGATGAAGAAACGGTCGGTCGATGGGCACATTGTGCACATTAACAGCATACTGGGACACAAGGTGATCCCGATGAACACGCTCAATGTGTATCCGGCCACCAAGTACGGTGTGACCGCGCTGACGGAGACA ATGCGGCACGAGCTGCGAATGGCGGGGACGAAAATCAAAGTCACGAGCATCAGTCCCGGTCTGGTAAGGACGGAGATCATCGGTAACAGTGGTGTGCTCAACGATATGCCCATACTCGAACCGGAAGACATCGCGAACGGCATTCTGTACGTGCTCGGCACCCCACCGCGTGTACAGGTGCACGAGCTAATGATCAAACCGGTCGGTGAATCGCTCGGATAAGTCACCACGAACCGAAATTCGATGAAGCAATCGATCCCAGAAATAAAGAAAGTGTTAA ] [+] EMBL CNS08CM3 [ cgAGGGTTTGTATCGCTTCTTTCGGCGTTATTGTACCGTACTTGTGTGGCCAGTAAGTGTCAAATAGAACATTCCAAACG ATAGCACGATGGAACGCTGGCGTGGCAAGGTGGCCATTGTGACCGGTGCTAGCTCCGGCATTGGGGCAGCAACGGTGAAAGCTCTCGCCAGTGCCGGTATGATCACGTTCGGCTTGGCCCGCCGTGTCGAACGGGTGGAAGCACTGAAGGACGAG CTGCCGGAGGATGCCCGCGAGCG GCTGCACGCACTGCGCTGTGACGTTACGAAGGAGGAGGACATTTTGGCCGCCTTCCGGGAGGTCGAACAACGGTGCGGCGGTGTCGATGTGCTGATCAACAATGCCGGCGTGGCGCGATCGAGTTTTGGCGTGCTGGATGCGAAAAATACGCAGGAGTTGCGCGACGTGATCGACACGAATTTGGTCGGGTTGGCGCTGTGCAGCC GGGAGG G TATCAATCGATGAAGAAACGGTCGGTCGATGGGCACATTGTGCACATTAACAGCATACTGGGACATAAGGTGATCCCGATGAACACGCTCAATGTGTATTCGGCCACCAAGTACGGTGTGA CGCGCTGACGGAGACAGATTCGGCACGAGCTGCGAATTGTTGGGACGAAAATCAAAGTCACGAGCATCAGTCCCGGTCTGGTAAGGACGGAGATCATCGGTAACAGTTGTGTTCTCAACGATATGCCCATACTCGAACCGGAAGACATCGCGAACGGCATTTTGTACGTTCTCGGCACCCCACCGCGTGTTCAGGTGCACGAGCTAATTATCAAACCGGTCGGTGAATCGCTCGGATAAGTTACCACGAACCGAAATTCGATGAAGCTATCGATCCCAGAAATAAAGAAAGTTTTAATAAAATACCATTTGGTACACATTTTGGAATAAATAGTTCGGTACAAATATTAAACGAGACAAAAAAAAAAAAAAAAAACA] [+] EMBL BX619232 [ CGCTTCTTTCGGCGTTATTGTACCGTACTTGTGTGGCCAGTAAGTGTCAAATAGAACATTCCAAACG ATAGCACGATGGAACGCTGGCGTGGAAAGGTGGCCATTGTGACCGGTGCTAGCTCCGGCATAGGGGCAGCAACGGTGAAAGCTCTCGCCAGTGCCGGTATGATCACGTTCGGCCTGGCCCGCCGTGTCGAACGGGTGGAAGCACTGAAGGACGAG CTGCCGGAGGATGCACGCGAGCG GCTGCACGCACTGCGCTGTGACGTTACGAAGGAGGAGGACATTTTGGCCGCCTTCCGGGAGGTCGAACAACGGTGCGGCGGTGTCGATGTGCTGATCAACAATGCCGGCGTGGCGCGATCGAGTGTCGGCGTGCTGGATGCGAAAAATACGCAGGAGTTGCGCGACGTGATCGACACGANTCTGNNNNGGTTGGCGCTGTGCAGCCNGGGAGGCG TATCAATCGATGANNANACGGTCGGTCGATGGGCACATTGTGCACATTAACAGCATACTGNGACACAAGGTGATCCCGATGAACACGCTCAATGTGTATTCGGCCACCCAGTACGGTGTGACCGCGCTGACGGAGACN ANGCGGCACGAGCTGCGAATGGCCGGGA ] [-] EMBL CNS094GS [ GTACTTTTGTGGCCAGTAAGTGTCAAATAGAACATTCCAAACG ATAGCACGATGGAAAGCTGGCGTGGCAAGGTGGCCATTGTGACCGGTGCTAGCTCCGGCATTGGGGCAGCAACGGTGAAAGCTCTCGCCAGTGCCGGTATGATCACGTTCGGCTTGGCCCGCCGTGTCGAACGGGTGGAAGCACTGAAGGACGAG CTGCCGGAGGATGCCCGCGAGCG GCTGCACGCACTGCGCTGTGACGTTACGAAGGAGGAGGACATTTTGGCCGCCTTCCGGGAGGTCGAACAACGGTGCGGCGGTGTCGATGTGCTGATCAACAATGCCGGCGTGGCGCGATCGAGTGTCGGCGTGCTGGATGCGAAAAATACGCAGGAGTTGCGCGACGTGATCGACACGAATCTGGTCGGGTTGGCGCTGTGCAGCC GGGAGGCG TATCAATCGATGAAGAAACGGTCGGTCGATGGGCACATTGTGCACATTAACAGCATACTGGGACACAAGGTGATCCCGATGAACACGCTCAATGTGTATCCGGCCACCAAGTACGGTGTGACCGCGCTGACGGAGACA ATGCGGCACGAGCTGCGAATGGCGGGGACGAAAATCAAAGTCACGAGCATCAGTCCCGGTCTGGTAAGGACGGAGATCATCGGTAACAGTGGTGTGCTCAACGATATGCCCATACTCGAACCGGAAGACATCGCGAACGGCATTCTGTACGTGCTCGGCACCCCACCGCGTGTACAGGTGCACGAGCTAATGATCAAACCGGTCGGTGAATCGCTCGGATAAGTCACCACGAACCGAAATTCGATGAAGCAATCGATCCCAGAAATAAAGAAAGTGTTAATAAAATACCATTTGGTACACATTTTGGAATAAATATTTAAGTACAAATATAAAAaa ] [+] EMBL BX608018 [ GGCCAGTAAGTGTCAAATAGAACATTCCAAACG ATAGCACGATGGAACGCTGGCGTGGCAAGGTGGCCATTGTGACCGGTGCTAGCTCCGGCATTGGGGCAGCAACGGTGAAAGCTCTCGCCAGTGCCGGTATGATCACGTTCGGCTTGTCCCGCCGTGTCGAACGGGTGGAAGCACTGAAGGACGAG CTGCCGGAGGATGCCCGCGAGCG GCTGCACGCACTGCGCTGTGACGTTACGAAGGAGGAGGACATTTTGGCCGCCTTCCGGGAGGTCGAACAACGGTGCGGCGGTGTCGATGTGCTGATCAACAATGCCGGCGTGGCGCGATCGAGTGTCGGCGTGCTGGATGCGAAAAATACGCAGGAGTTGCGCGACGTGATCGACACGAATCTGGTCGGGTTGGCGCTGTGCAGCC GGGAGGCG TATCAATCGATGAAGAAACGGTCGGTCGATGGGCACATTGTGCACATTAACAGCATACTGGGACACAAAGTGATCCCGATGAACACGCTCAATGTGTATC ] [+] EMBL BX611024 [ AGCTCCGGCATTGGGGTAGCAACGGTGAAAGCTCTCGCCAGTGCCGGTATGATCACGTTCGGCTTGGCCCGCCGTGTCGAACGGGTGGAAGCACTGAAGGACGAG CTGCCGGAGGATGCCCGCGAGCG GCTGCACGCACTGCGCTGTGACGTTACGAAGGAGGAGGACATTTTGGCCGCCTTCCGGGAGGTCGAACAACGGTGCGGCGGTGTCGATGTGCTGATCAACAATGCCGGCGTGGCGCGATCGAGTGTCGGCGTGCTGGATGCGAAAAATACGCAGGAGTTGCGCGACGTGATCGACACGAATCTGGTCGGGTTGGCGCTGTGCAGCC GGGAGGCG TATCAATCGATGAAGAAACGGTCGGTCGATGGGCACATTGTGCACATTAACAGCATACTGGGACACAAGGTGATCCCGATGAACACGCTCAATGTGTATCCGGCCACCAAGTACGGTGTGACCGCGCTGACGGAGACG ATGCGGCACGAGCTGCGAATGGCGGGGACGAAAATCAAAGTCACGAGCATCAGTCCCGGTCTGGTAAGGACGGAGATCATCGGAAACAGTGGTGTGCTCAACGATATGCCCATACTCGAACCGGAAGACATCGCGAACGGCATTCTGTACGTGCTCGGCA ] [-] EMBL CNS09MKP [ CAGCC GGCAGGCG TATCAATCAATAAAGAAACGGTCGGTCGATGGGCACATTGTGCACATTAACAGCAAACTGGGACACAAGGTGATCCCGATGAACACGCTCAATGTGTATCCGGCCACCAAGTACGGTGTGACCGCGCTGACGGAGACA ATGCGGCACGAGCTGCGAATGGCGGGGACGAAAATCAAAGTCACGAGCATCAGTCCCGGTCTGGTAAGGACGGAGATCATCGGTAACAGTGGTGTGCTCAACGATATGCCCATACTCGAACCGGAAGACATCGCGAACGGCATTCTGTACGTGCTCGGCACCCCACCGCGTGTACAGGTGCACGAGCTAATGATCAAACCGGTCGGTGAATCGCTCGGATAAGTCACCACGAACCGAAATTCGATGAAGCAATCGATCCCAGAAATAAAGAAAGTGTTAATAAAATACCATTTGGTACACATTTT GAATAAATAGTT ] [-] EMBL CNS08CM4 [ GCATACTGGGAAACAAGGTGATCCCGATGGAAACGCTCAATGTGTATCCGGCCCCCAAGTACGGTGTGACCGCGCTGACGGAGAAA ATGCGGCACGAGCTGCAAATGGCGGGGACGAAAATAAAAGTAACGAGCATTAGTCCCGGTCTGGTAAGGACGGAGATCATCGGTAAAAGTGGTGTGCTCAACGATATGCCCATACTCGAACCGGAAGACATCGCGAACGGCATTCTGTACGTGCTCGGCACCCCCCCGCGTGTACAGGTGCACGAGCTAATGATCAAACCGGTCGGTGAATCGCTCGGATAAGTCACCACGAACCGAAATTCGATGAAGCAATCGATCCCAGAAATAAAGAAAGTGTTAATAAAATACCATTTGGTACACATTTTGGAATAAATAGTTCGGTAAAAATATAAA ] [-] EMBL CNS099KG [ GTGTATCCGGCCACCAAGTACGGTTTTACCGCGCTGACGGAGACA ATGCGGCACGAGCTGCGAATGGCGGGGACGAAAATCAAAGTCACGAGCATCAGTCCCGGTCTGGTAAGGACGGAGATCATCGGTTACAGTGGTGTGCTCAACGATATGCCCATACTCGAACCGGAAGACATCGCGAACGGCATTCTGTACGTGCTCGGCACCCCACCGCGTGTACAGGTGCACGAGCTAATGATCAAACCGGTCGGTGAATCGCTCGGATAAGTCACCACGAACCGAAATTCGATGAAGCAATCGATCCCAGAAATAAAGAAAGTGTTAATAAAATACCATTTGGTACACATTTTGGAATAAATAGTTCGGTA ] consensusID : consensus_9599#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 808 fasta sequence [AAGCTCTCGCCAGTGCCGGTATGATCACGTTCGGCTTGGCCCGCCGTGTCGAACGGGTGGAAGCACTGAAGGACGAGCTGCCGGAGGATGCCCGCGAGCGCGCTGCACGCACTGCGCTGTGACGTTACGAAGGAGGAGGACATTTTGGCCGCCTTCCGGGAGGTCGAACAACGGTGCGGCGGTGTCGATGTGCTGATCAACAATGCCGGCGTGGCGCGATCGAGTGTCGGCGTGCTGGATGCGAAAAATACGCAGGAGTTGCGCGACGTGATCGACACGAATCTGGTCGGGTTGGCGCTGTGCAGCCGGGAGGCGTTATCAATCGATGAAGAAACGGTCGGTCGATGGGCACATTGTGCACATTAACAGCATACTGGGACACAAGGTGATCCCGATGAACACGCTCAATGTGTATCCGGCCACCAAGTACGGTGTGACCGCGCTGACGGAGACAATGCGGCACGAGCTGCGAATGGCGGGGACGAAAATCAAAGTCACGAGCATCAGTCCCGGTCTGGTAAGGACGGAGATCATCGGTAACAGTGGTGTGCTCAACGATATGCCCATACTCGAACCGGAAGACATCGCGAACGGCATTCTGTACGTGCTCGGCACCCCACCGCGTGTACAGGTGCACGAGCTAATGATCAAACCGGTCGGTGAATCGCTCGGATAAGTCACCACGAACCGAAATTCGATGAAGCAATCGATCCCAGAAATAAAGAAAGTGTTAATAAAATACCATTTGGTACACATTTTGGAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCACATGTGCTCGGGCTG] [+] EMBL CNS09L3Q [AAGCTCTCGCCAGTGCCGGTATGATCACGTTCGGCTTGGCCCGCCGTGTCGAACGGGTGGAAGCACTGAAGGACGAGCTGCCGGAGGATGCCCGCGAGCGCGCTGCACGCACTGCGCTGTGACGTTACGAAGGAGGAGGACATTTTGGCCGCCTTCCGGGAGGTCGAACAACGGTGCGGCGGTGTCGATGTGCTGATCAACAATGCCGGCGTGGCGCGATCGAGTGTCGGCGTGCTGGATGCGAAAAATACGCAGGAGTTGCGCGACGTGATCGACACGAATCTGGTCGGGTTGGCGCTGTGCAGCCGGGAGGCGTTATCAATCGATGAAGAAACGGTCGGTCGATGGGCACATTGTGCACATTAACAGCATACTGGGACACAAGGTGATCCCGATGAACACGCTCAATGTGTATCCGGCCACCAAGTACGGTGTGACCGCGCTGACGGAGACAATGCGGCACGAGCTGCGAATGGCGGGGACGAAAATCAAAGTCACGAGCATCAGTCCCGGTCTGGTAAGGACGGAGATCATCGGTAACAGTGGTGTGCTCAACGATATGCCCATACTCGAACCGGAAGACATCGCGAACGGCATTCTGTACGTGCTCGGCACCCCACCGCGTGTACAGGTGCACGAGCTAATGATCAAACCGGTCGGTGAATCGCTCGGATAAGTCACCACGAACCGAAATTCGATGAAGCAATCGATCCCAGAAATAAAGAAAGTGTTAATAAAATACCATTTGGTACACATTTTGGAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCACATGTGCTCGGGCTG] consensusID : consensus_9599#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 734 fasta sequence [TCCTTCCTTCGTTTCTTATCATAAAGCCCGTCACACAGCCATGGAACGCTGGCGTGGAAAGGTGGCCATTGTGACCGGTGCTAGCTCCGGCATTGGTGCAGTGACGGTGAAAGCCCTCGCCAACGCCGGTATGATCACGTTCGGCCTGGCTCGCCGTGTCGAACGGGTCGACGAGCTGAAGAAGGACCTTCCCGCCGAGGCAGCGGACCGGCTGCACAGTGTCCGGTGTGACGTTACGACATTTTGGCCGCCTTCCAGCTGGTGGAGGAAAAGTGTGGCGGTGTCGATGTGCTGATCAACAACGCCGGTCAGTTGAAGCGCGCGGTCAGTGTGCTGGATGCGGGCAATACGCAGGTTATACGGGATGTGATCGATACGAACGTGGTCGGGTTGGCGCTGTGCAGCCGGGAAGCGTTCCAGTTGATGAAGCGTCGCTTGGTCGATGGGCATATCGTGCACATTAGCAGCATCCTTGGCCATACGGTTGCGACGACGGGCAAGCTTAACGTCTATCCGGCATCAAAGTTCGCGGTGACAGCGCTGACCGAAACGATGCGCCACGAGCTGAGGCTGGCGGGAACGAAAATCAAAGTCACGAGCATCAGCCCGGGACTGGTCAGAACGGAGATGCCGCCCAGTACAGTCTTTGCCGANGAGCCCTGTCTCGAGCCGGANGACATTGCGGATGCTGTGCTATACGTGCTCGGGACACCGCCCCGGGTACAGATCCACGA] [+] EMBL BX622312 [TCCTTCCTTCGTTTCTTATCATAAAGCCCGTCACACAGCCATGGAACGCTGGCGTGGAAAGGTGGCCATTGTGACCGGTGCTAGCTCCGGCATTGGTGCAGTGACGGTGAAAGCCCTCGCCAACGCCGGTATGATCACGTTCGGCCTGGCTCGCCGTGTCGAACGGGTCGACGAGCTGAAGAAGGACCTTCCCGCCGAGGCAGCGGACCGGCTGCACAGTGTCCGGTGTGACGTTACGACATTTTGGCCGCCTTCCAGCTGGTGGAGGAAAAGTGTGGCGGTGTCGATGTGCTGATCAACAACGCCGGTCAGTTGAAGCGCGCGGTCAGTGTGCTGGATGCGGGCAATACGCAGGTTATACGGGATGTGATCGATACGAACGTGGTCGGGTTGGCGCTGTGCAGCCGGGAAGCGTTCCAGTTGATGAAGCGTCGCTTGGTCGATGGGCATATCGTGCACATTAGCAGCATCCTTGGCCATACGGTTGCGACGACGGGCAAGCTTAACGTCTATCCGGCATCAAAGTTCGCGGTGACAGCGCTGACCGAAACGATGCGCCACGAGCTGAGGCTGGCGGGAACGAAAATCAAAGTCACGAGCATCAGCCCGGGACTGGTCAGAACGGAGATGCCGCCCAGTACAGTCTTTGCCGANGAGCCCTGTCTCGAGCCGGANGACATTGCGGATGCTGTGCTATACGTGCTCGGGACACCGCCCCGGGTACAGATCCACGA] [+] EMBL BX622452 [ GTGACCGGTGCTAGCTCCGGCATTGGTGCAGTGACGGTGAAAGCCCTCGCCAACGCCGGTATGATCACGTTCGGCCTGGCTCGCCGTGTCGAACGGGTCGACGAGCTGAAGAAGGACCTTCCCGCCGAGGCAGCGGACCGGCTGCACAGTGTCCGGTGTGACGTTACGACATTTTGGCCGCCTTCCAGCTGGTGGAGGAAAAGTGTGGCGGTGTCGATGTGCTGATCAACAACGCCGGTCAGTTGAAGCGCGCGGTCAGTGTGCTGGATGCGGGCAATACNCAGGTTATACGGGATGTGATCGATACGAACGTGGTCGGGTTGGCGCTGTGCAGCCGGGAAGCGTTCCAGTTGATGAAGCGTCGCTTGGTCNATGGGCATATCGTGCACATTAGCAGCATCCTTGGCCATACNGTTGCGACGACGGGCAAGCTTAACGTCTATCCGGCATCAAAGTTCGCGGTGACAGCGCTGACCGAAACGATGCGCCACGAGCTGAGGCTGGCGGGAACGAAAATCNAAGTCACGAGCATCAGCCCGGGACTGGTCAGAACGGAGATGCCGCCCANTACAGTCTTTGCCGAGGAGCCCTGTCTCGAGCCNGAGGACATTGCGGATGCTGTGCTATACGTGCTCNGG ] consensusID : consensus_9599#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 602 fasta sequence [CAGAATACCCCGGTTATTTTTNTGTTATTGTACCCATTGGTTNTGNCANTAAGTGTCGANATAGAACATTCCAAACGATAGCACGATGGAACGCTGGCGTAGGCAAGGTGGCCATATGTGACCGGTGACTAGCATCCGGCATNGGGCGCAGCTAACGGTGAAAGCTACTCGCACANTGNCGGTATGATCACGTTCGGCTTGGGCCCGNCGATGTCGAACGGGNTGGAAGCACTGAAGGACGAGCTGCACGNGAGGATGNCCCGCTGAGCTGGCTGCTACGCACTGTCNCTGTGACGTNNACGAAGTGAGGAGGACATTTANAGGCCGCCTTCCGGGAGGTCGAACAACGGTGCGGCGGTNGTACGATGTGCTNGATCAACCAATNGCCGGCGTGGCGCGATCGAGATGTCGGCGTGCTGGACTGCGAAAAATACGCAGGAATTGCGCGACTGTGAATCGANCACGAATCTGGATACGAGNGTTGGACGCTAGTGCANCCCGGTGCACAGCGTATCAAATCGATGAAGAAACGGTCGGATCGATGGGCACACTCAGTGCACATTCNCCCGGCCACTACCTGGGACCACAAGGGTGAATCCCGG] [+] EMBL AL932125 [CAGAATACCCCGGTTATTTTTNTGTTATTGTACCCATTGGTTNTGNCANTAAGTGTCGANATAGAACATTCCAAACGATAGCACGATGGAACGCTGGCGTAGGCAAGGTGGCCATATGTGACCGGTGACTAGCATCCGGCATNGGGCGCAGCTAACGGTGAAAGCTACTCGCACANTGNCGGTATGATCACGTTCGGCTTGGGCCCGNCGATGTCGAACGGGNTGGAAGCACTGAAGGACGAGCTGCACGNGAGGATGNCCCGCTGAGCTGGCTGCTACGCACTGTCNCTGTGACGTNNACGAAGTGAGGAGGACATTTANAGGCCGCCTTCCGGGAGGTCGAACAACGGTGCGGCGGTNGTACGATGTGCTNGATCAACCAATNGCCGGCGTGGCGCGATCGAGATGTCGGCGTGCTGGACTGCGAAAAATACGCAGGAATTGCGCGACTGTGAATCGANCACGAATCTGGATACGAGNGTTGGACGCTAGTGCANCCCGGTGCACAGCGTATCAAATCGATGAAGAAACGGTCGGATCGATGGGCACACTCAGTGCACATTCNCCCGGCCACTACCTGGGACCACAAGGGTGAATCCCGG] consensusID : consensus_9599#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 501 fasta sequence [AGCAGAATCAGCCCNAGGATTAATCGGAACACACGCACGCGTTACAGTTGGCTCCTTCCTTCGTNCTTATACAAAAAGCTCGTCACACAGCCATGGAACGCTGGGCGTGGAAAGTGTGGCCATATGTGACCGGTGCTAGGCTCCGGCATATGGTGCAGTGACGGTGAAAGCGCTACGGCCAACGCCGGTATGATCACGTTCGGTCTGGCTACGCCGTGTCGAACGGGTCGACGAGCTGAAGGAAGGACCTTNTCTGCCGAGGACAGCGGACCTGGCTGCACAGTGTCCTGGTGTTGTACGTATACGAAGGAGGAGGACATTTTGGCCGCCTTACCAGCTGGTGGAGGAAAAGTGTGGCCGGTGTCGATGTGCTGATCAACAATGCCNGGTCAGTCAGAAGCGCGCGGTCAGTGTGCTGGATGCGGGCAATACGCAGGTCATACGGGATGTGATCGATACGAACGTGGTCGGGTTGGCGCTGTGCAGCCGGGAAGCGTTCCA] [+] EMBL AL693981 [AGCAGAATCAGCCCNAGGATTAATCGGAACACACGCACGCGTTACAGTTGGCTCCTTCCTTCGTNCTTATACAAAAAGCTCGTCACACAGCCATGGAACGCTGGGCGTGGAAAGTGTGGCCATATGTGACCGGTGCTAGGCTCCGGCATATGGTGCAGTGACGGTGAAAGCGCTACGGCCAACGCCGGTATGATCACGTTCGGTCTGGCTACGCCGTGTCGAACGGGTCGACGAGCTGAAGGAAGGACCTTNTCTGCCGAGGACAGCGGACCTGGCTGCACAGTGTCCTGGTGTTGTACGTATACGAAGGAGGAGGACATTTTGGCCGCCTTACCAGCTGGTGGAGGAAAAGTGTGGCCGGTGTCGATGTGCTGATCAACAATGCCNGGTCAGTCAGAAGCGCGCGGTCAGTGTGCTGGATGCGGGCAATACGCAGGTCATACGGGATGTGATCGATACGAACGTGGTCGGGTTGGCGCTGTGCAGCCGGGAAGCGTTCCA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9599#0 CTGTTGGCCTACTGGAGTCGCACTGAACCGTCGAAGGGTTTGTATCGCTTCTTTCGGCGT 60 consensus_9599#1 ------------------------------------------------------------ consensus_9599#3 ------------------------------------------------------------ consensus_9599#2 ------------------------------------------------------------ consensus_9599#4 ------------------------------------------------------------ consensus_9599#0 TATTGTACCGTACTTGTGTGGCCAGTAAGTGTCAAATAGAACATTCCAAACGATAGCACG 120 consensus_9599#1 ------------------------------------------------------------ consensus_9599#3 ------------------------------------------------------------ consensus_9599#2 ------------------------------------------------------------ consensus_9599#4 ------------------------------------------------------------ consensus_9599#0 ATGGAACGCTGGCGTGGCAAGGTGGCCATTGTGACCGGTGCTAGCTCCGGCATTGGGGCA 180 consensus_9599#1 ------------------------------------------------------------ consensus_9599#3 ------------------------------------------------------------ consensus_9599#2 ------------------------------------------------------------ consensus_9599#4 ------------------------------------------------------------ consensus_9599#0 GCAACGGTGAAAGCTCTCGCCAGTGCCGGTATGATCACGTTCGGCTTGGCCCGCCGTGTC 240 consensus_9599#1 ----------AAGCTCTCGCCAGTGCCGGTATGATCACGTTCGGCTTGGCCCGCCGTGTC 50 consensus_9599#3 ------------------------------------------------------------ consensus_9599#2 ------------------------------------------------------------ consensus_9599#4 ------------------------------------------------------------ consensus_9599#0 GAACGGGTGGAAGCACTGAAGGACGAGCTGCCGGAGGATGCCCGCGAGCG-GCTGCACGC 299 consensus_9599#1 GAACGGGTGGAAGCACTGAAGGACGAGCTGCCGGAGGATGCCCGCGAGCGCGCTGCACGC 110 consensus_9599#3 ---------------------------------CAGAATACCC-CGGTTATTTTTNTGTT 26 consensus_9599#2 ------------------------------------------------------------ consensus_9599#4 ----------------------------AGCAGAATCAGCCCNAGGATTAATCGGAACAC 32 consensus_9599#0 ACTGCGCTGTGACGTTACGAAGGAGGAGGACATTTTGGCCGCCTTCCGGGAGGTCGAACA 359 consensus_9599#1 ACTGCGCTGTGACGTTACGAAGGAGGAGGACATTTTGGCCGCCTTCCGGGAGGTCGAACA 170 consensus_9599#3 ATTGTACCCATTGGTTNTGNCANTAAGTGTCGANATAGA-ACATTCCAAACGATAGCACG 85 consensus_9599#2 --------------------TCCTTCCTTCGTTTCTTATCATAAAGCCCGTCACACAGCC 40 consensus_9599#4 ACGCACGCGTTACAGTTGGCTCCTTCCTTCGTNCTTATACAAAAAGCTCGTCACACAGCC 92 * * * consensus_9599#0 ACGGTGCGGCGG-TGTCGATGTGCTGATCAACAATG-CCGGCGTGGCGCGATCGAGTGTC 417 consensus_9599#1 ACGGTGCGGCGG-TGTCGATGTGCTGATCAACAATG-CCGGCGTGGCGCGATCGAGTGTC 228 consensus_9599#3 ATGGAACGCTGG-CGTAGGCAAGGTGGCCATATGTGACCGGTGACTAGCATCCGGCATNG 144 consensus_9599#2 ATGGAACGCTGG-CGTGGAAAG-GTGGCCAT-TGTGACCGGTGCTAG-C-TCCGGCAT-T 94 consensus_9599#4 ATGGAACGCTGGGCGTGGAAAGTGTGGCCATATGTGACCGGTGCTAGGC-TCCGGCATAT 151 * ** ** ** ** * ** ** ** **** * * ** consensus_9599#0 GGCGT-GCTGGATGCGAAAAATACGCAGGAGTTGCGCGACGTGATCGACACGAATCTGGT 476 consensus_9599#1 GGCGT-GCTGGATGCGAAAAATACGCAGGAGTTGCGCGACGTGATCGACACGAATCTGGT 287 consensus_9599#3 GGCGCAGCTAACGGTGAAAGCTACTCGCACANTGN-CGGTATGATCACGTTCGGCTTGGG 203 consensus_9599#2 GGTGC-AGTGACGGTGAAAGCCCTC--GCCAACGC-CGGTATGATCACGTTCGGCCTGGC 150 consensus_9599#4 GGTGC-AGTGACGGTGAAAGCGCTACGGCCAACGC-CGGTATGATCACGTTCGGTCTGGC 209 ** * * * **** * ** ***** *** consensus_9599#0 CGGGTTGGCGCTGTGCAGCCGGGAGGCGT-ATCAATCGA--TGAA-GAAACGGTCGGTCG 532 consensus_9599#1 CGGGTTGGCGCTGTGCAGCCGGGAGGCGTTATCAATCGA--TGAA-GAAACGGTCGGTCG 344 consensus_9599#3 CCCGNCGATGTCGAACGGGNTGGAAGCACTGAAGGACGAGCTGCACGNGAGGATGNCCCG 263 consensus_9599#2 T-CGCCG-TGTCGAACGGGTCG-ACGAGCTGAAG-AAGGACCTTCCC-GCCGA-GG-CAG 203 consensus_9599#4 TACGCCG-TGTCGAACGGGTCG-ACGAGCTGAAGGAAGGACCTTNTCTGCCGA-GGACAG 266 * * * * * * * * * * * * consensus_9599#0 ATGGGCACATTG-TGCACATTAACAGCATACTGGGACACAAGGTGATCCCGATGAACACG 591 consensus_9599#1 ATGGGCACATTG-TGCACATTAACAGCATACTGGGACACAAGGTGATCCCGATGAACACG 403 consensus_9599#3 CTGAGCTGGCTGCTACGCACTGTCNCTGTGACGTNN-ACGAAGTGA----GGAGGACATT 318 consensus_9599#2 CGGACC-GGCTG---CACAGTGTCC-GGTGTG--ACGT-TACGA--------------CA 241 consensus_9599#4 CGGACCTGGCTG---CACAGTGTCCTGGTGTTGTACGTATACGAAG----GAGGAGGACA 319 * * ** * ** * * * * * consensus_9599#0 CTCAATGTGTATC-CGGCCACCAAGTACGGTGTGACCGCGCTGACGGAGACAATGCGGCA 650 consensus_9599#1 CTCAATGTGTATC-CGGCCACCAAGTACGGTGTGACCGCGCTGACGGAGACAATGCGGCA 462 consensus_9599#3 TANAGGCCGCCTT-CCGGGAGGTCGAACAACGGTGCGGCGGTNGT----ACGATGTG-CT 372 consensus_9599#2 TTTTGGCCGCCTT-CCAGCTGGTGGAGGAAAAGTGTGGC-GGTGT-----CGATGTG--C 292 consensus_9599#4 TTTTGGCCGCCTTACCAGCTGGTGGAGGAAAAGTGTGGCCGGTGT-----CGATGTG--C 372 * * * * ** * *** * consensus_9599#0 CGAGCTGCGAATGGCGGGGACGAAA--ATCAAAGTCACGAGCATCAGTCCCGGTCTGGTA 708 consensus_9599#1 CGAGCTGCGAATGGCGGGGACGAAA--ATCAAAGTCACGAGCATCAGTCCCGGTCTGGTA 520 consensus_9599#3 NGATCAACCAATNGCCGGCGTGGCGCGATCGAGATGTCG-GCGT--GCTGGACTGCGAAA 429 consensus_9599#2 TGATCAAC-AACGCCGG-TCAGTT-GAAGCGCGCGGTCA-GTGT--GCTGGA-TGCGGGC 345 consensus_9599#4 TGATCAAC-AATGCCNGGTCAGTCAGAAGCGCGCGGTCA-GTGT--GCTGGA-TGCGGGC 427 ** * * ** * * * * * * * * * * * consensus_9599#0 AGGACGGAGATCATCGGTAACAGTGGTGTGCTCAACGATATGCCCATACTCGAACCGGAA 768 consensus_9599#1 AGGACGGAGATCATCGGTAACAGTGGTGTGCTCAACGATATGCCCATACTCGAACCGGAA 580 consensus_9599#3 AATACGCAGGAATTGCGCGACTGTGAATCGANCACGAATCTGG--ATACGAGNGTTGGA- 486 consensus_9599#2 AATACGCAGGTTATACGGGA-TGTGA-TCGAT-ACGAACGTGGTCGGGTTGGCGCTGTGC 402 consensus_9599#4 AATACGCAGGTCATACGGGA-TGTGA-TCGAT-ACGAACGTGGTCGGGTTGGCGCTGTGC 484 * *** ** * * * *** * * * ** * * consensus_9599#0 GACATCGCGAACGGCATTCTGTACGTGCTCGGCACCCCACCGCG-TGTACAGGTGCACGA 827 consensus_9599#1 GACATCGCGAACGGCATTCTGTACGTGCTCGGCACCCCACCGCG-TGTACAGGTGCACGA 639 consensus_9599#3 -----CGCTAGTG-CANCCCG---GTGCACAGCGTATCAAATCGATGAAGAAACGGTCGG 537 consensus_9599#2 AGC----CGGGAAGCGTTCCA---GTTGATGAAGCGTCGCTTGGTCGATGGGCATATCGT 455 consensus_9599#4 AGC----CGGGAAGCGTTCCA--------------------------------------- 501 * * * consensus_9599#0 GCTAATGATCAAACCGGTCGGTGAATCGCTCGGATAAGTCACCACGAACCGAAATTCGAT 887 consensus_9599#1 GCTAATGATCAAACCGGTCGGTGAATCGCTCGGATAAGTCACCACGAACCGAAATTCGAT 699 consensus_9599#3 ATCGATGGGCACACTCAGTGCACATTCNCCCGGCCA--CTACCTGGGACCACAA--GGGT 593 consensus_9599#2 GCACATTAGCAGCATCCTTGGCCATACGGTTGCGACGACGGGCAAGCTTAACGTCTATCC 515 consensus_9599#4 ------------------------------------------------------------ consensus_9599#0 GAAGCAATCGATCCCAGAAATAAAGAAAGTGTTAATAAAATACCATTTGGTACACATTTT 947 consensus_9599#1 GAAGCAATCGATCCCAGAAATAAAGAAAGTGTTAATAAAATACCATTTGGTACACATTTT 759 consensus_9599#3 GAATC--CCGG------------------------------------------------- 602 consensus_9599#2 GGCATCAAAGTTCGCGGTGACAGCGCTGACCGAAACGATGCGCCACGAGCTGAGGCTGGC 575 consensus_9599#4 ------------------------------------------------------------ consensus_9599#0 GGAATAAATAGTTCGGTACAAATATAAAACGAGACAAAAAAAAAAAAAAAAAACA----- 1002 consensus_9599#1 GGAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCACATGTGCTCGGGCTG----------- 808 consensus_9599#3 ------------------------------------------------------------ consensus_9599#2 GGGAACGAAAATCAAAGTCACGAGCATCAGCCCGGGACTGGTCAGAACGGAGATGCCGCC 635 consensus_9599#4 ------------------------------------------------------------ consensus_9599#0 ------------------------------------------------------------ consensus_9599#1 ------------------------------------------------------------ consensus_9599#3 ------------------------------------------------------------ consensus_9599#2 CAGTACAGTCTTTGCCGANGAGCCCTGTCTCGAGCCGGANGACATTGCGGATGCTGTGCT 695 consensus_9599#4 ------------------------------------------------------------ consensus_9599#0 --------------------------------------- consensus_9599#1 --------------------------------------- consensus_9599#3 --------------------------------------- consensus_9599#2 ATACGTGCTCGGGACACCGCCCCGGGTACAGATCCACGA 734 consensus_9599#4 --------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||