These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9613#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 16 consensus length = 1593 fasta sequence [CCGCGTTCGTTCTGCCAGCGAGTGCACGTGTGTGTTTCAAACGTTTTTCC-CTTTTACTGTCGTCGATACTGTTCCGGGTTCCGTGTACCGGGG-GTGTGTGTGTGTGTTCATGTGTTTGGCGTAGGCCTTGTGATCTATTCGACACACAAAGGAACGATCGTGTTGCATCCTGTGCAAAAGGTGCATTTCTGTTG-TCATC------GCAGCCAACGAGCCAGACAAGCGCATACAAAATGTCGCGTACGCTGGAATTGTCGCCCAATGCTCACATCAACAAGTCGCTGCTCGACAAGTACATGGCCTTGCCGATGCCGGACGGTAAGATTCAGGCGACGTACATCTGGATCGATGGCACCGGCGAGAACGTCCGCTGCAAGGACCGCACGCTCGACTTCATCCCCCAGTCACCGAGTGAGCTCCCGATCTGGAACTACGATGGCAGCTCGACGTACCAGGCGGAGGGTTCG-AACTCGGACGTGTACCTGCACCCGGTCGCGATCTATCGCGATCCGTTCCGCCGTGGCAACAACATCCTCGTGCTGTGCGAAACCTA-CCGCTACGATGGCACACCGACCGAGTCGAACAAGCGCAAGGCGTGCCTGGAGGTGTGCGAGCGGGCGGCCGAGGAGCAGCCGTGGTTCGGTATCGAGCAGGAGTACACGCTGC-T-GGATGTGGATGGTCGTCCGCTCGGCTGGCCGAAGAACGGTTTCCCGGGACCGCAGGGCCCGTACTATTGCGGCGTCGGTGCGGACAAGGTGTACGCGCGCGACATCGTCGATGCGCACTATCGGGCCTGTCTGTACGCGGGCGTGAAGATTTGCGGCACGAACGCGGAAGTGATGCCGGCCCAGTGGGAGTACCAGGTGGGCCCGTGCGAGGGCATCCAGATCGGGGATGATCTGTGGATGTCCCGGTTTCTGCTGCACCGCGTGGCGGAGGAGTTTGGTATCGTTGCCACGCTCGACCCGAAACCGATGCAGGGTGACTGGAACGGGGCCGGTGCGCACACGAACGTTTTCCA-CAAGACGATGCGCGAACCGGGCGGCCTGGCGGAGATCGAAAACGCGATCAGCAAGCTGGCGAAGTGCCACGAGCGTCACATTCGCGCGTACGACCCGAACGGTGGAAAGGACAACGAGCGTCGCCTGACCGGAAAGCACGAAACTAGCTCGATCCACGATTTTAATGCCGGTGTCGCTAATCGTGGCTGTTCGATTCGTATTCCGCGTGGCGTTTCCGACCAAGGGTTCGGCTACTTCGAGGATCGCCGTCCCAGCTCCAACTGCGATCCGTACAGCGTGGCCGAGGCTATCCTGCGCACGATCATCCTCAACGAGTAAGAGACGGACCGACCGGTGTCGTCGTTGTCGTCGTTGTCGTTGGACATTCCACAAGCCTTTTGGAGAGTTGTATTTCCATGCTGCACCTTGAGGAAAAAAAGGAGAGAGGCGAAAGAAAAAAAAGGATGCATTCAGTAGCTACACACCGACACCGATCAGTTGTACGATCGGGTTATCTTTTTTTCGCTCTCGTTATTTTATGTTTAATTTGTGTGTGTGTATCATGGCTTTGGTTGCCTTTTTCTCCTGCTCCCTC] [+] EMBL BM576888 [CCGCGTTCGTTCTGCCAGCGAGTGCACGTGTGTGTTTCAAACGTTTTTCC CTTTTACTGTCGTCGATACTGTTCCGGGTTCCGTGTACCGGGG GTGTGTGTGTGTGTTCATGTGTTTGGCGTAGGCCTTGTGATCTATTCGACACACAAAGGAACGATCGTGTTGCATCCTGTGCAAAAGGTGCATTTCTGTTG TCATC GCAGCCAACGAGCCAGACAAGCGCATACAAAATGTCGCGTACGCTGGAATTGTCGCCCAATGCTCACATCAACAAGTCGCTGCTCGACAAGTACATGGCCTTGCCGATGCCGGACGGTAAGATTCAGGCGACGTACATCTGGATCGATGGCACCGGCGAGAACGTCCGCTGCAAGGACCGCACGCTCGACTTCATCCCCCAGTCACCGAGTGAGCTCCCGATCTGGAACTACGATGGCAGCTCGACGTACCAGGCGGAGGGTTCG AACTCGGACGTGTACCTGCACCCGGTCGCGATCTATCGCGATCCGTTCCGCCGTGGCAACAACATCCTCGTGCTGTGCGAAACCTA CCGCTACGATGGCACACCGACCGAGTCGAACAAGCGCAAGGCGTGCCTGGAGGTGTGCGAGCGGGCGG ] [+] EMBL BM649382 [CCG GTTCGTTCTGCCAGCGAGTGCACGTGTGTGTTTCAAACGTTTTTCC CTTTTACTGTCGTCGATACTGTTCCGGGTTCCGTGTACCGGGG GTGTGTGTGTGTGTTCATGTGTTTGGCGTAGGCCTTGTGATCTATTCGACACACAAAGGAACGATCGTGTTGCATCCTGTGCAAAAGGTGCATTTCTGTTG TCATC GCAGCCAACGAGCCAGACAAGCGCATACAAAATGTCGCGTACGCTGGAATTGTCGCCCAATGCTCACATCAACAAGTCGCTGCTCGACAAGTACATGGCCTTGCCGATGCCGGACGGTAAGATTCAGGCGACGTACATCTGGATCGATGGCACCGGCGAGAACGTCCGCTGCAAGGACCGCACGCTCGACTTCATCCCCCAGTCACCGAGTGAGCTCCCGATCTGGAACTACGATGGCAGCTCGACGTACCAGGCGGAGGGTTCG AACTCGGACGTGTACCTGCACCCGGTCGCGATCTATCGCGATCCGTTCCGCCGTGGCAACAACATCCTCGTGCTGTGCGAAACCTA CCGCTACGATGGCACACCGACCGAGTCGAACAAGCGCAAGGCGTGCCTGGAGGTGTGCGAGCGGGCGGCCGTAGAACAGCCGTGGTTCGGTATCGA ] [+] EMBL BM612537 [ ccgGCCAGCGAGTGCACGTGTGTGTTTCAAACGCTTTTCC CTTTTACTGTCGTCGATACCGTTCCGGGTTCCGTGTACCGGGGTGTGTGTGTGTGTGTTCATGTGTTTGGCGTAGGCCTTGTGATCTATTCGACACACAAAGGAACGATCGTGTTGCATCCTGTGCAAAAGGTGCATTTCTGTTG TCATC GCAGCCAACGAGCCAGACAAGCGCATACAAAATGTCGCGTACGCTGGAACTGTCGCCCAATGCGCACATCAACAAGTCGCTGCTCGACAAGTACATGGCCTTGCCGATGCCGGACGGTAAGATTCAGGCGACGTACATCTGGATCGATGGCACCGGCGAGAACGTCCGCTGCAAGGACCGCACGCTAGACTTCATCCCCCAGTCGCCGAGTGAGCTCCCGATCTGGAACTACGATGGCAGCTCGACGTACCAGGCGGAGGGTTCG AACTCGGACGTGTACCTGCACCCGGTCGCGATCTATCGCGATCCGTTCCGCCGTGGCAACAACATCCTCGTGCTGTGCGAAACCT ] [+] EMBL BM576164 [ ccgGCCAGCGAGTGCACGTGTGTGTTTCAAACGTTTTTCC CTTTTACTGTCGTCGATACTGTTCCGGGTTCCGTGTACCGGGG GTGTGTGTGTGTGTTCATGTGTTTGGCGTAGGCCTTGTGATCTATTCGACACACAAAGGAACGATCGTGTTGCATCCTGTGCAAAAGGTGCATTTCTGTTG TCATC GCAGCCAACGAGCCAGACAAGCGCATACAAAATGTCGCGTACGCTGGAATTGTCGCCCAATGCTCACATCAACAAGTCGCTGCTCGACAAGTACATGGCCTTGCCGATGCCGGACGGTAAGATTCAGGCGACGTACATCTGGATCGATGGCACCGGCGAGAACGTCCGCTGCAAGGACCGCACGCTCGACTTCATCCCCCAGTCACCGAGTGAGCTCCCGATCTGGAACTACGATGGCAGCTCGACGTACCAGGCGGAGGGTTCG AACTCGGACGTGTACCTGCACCCGGTCGCGATCTATCGCGATCCGTTCCGCCGTGGCAACAACATCCTCGTGCTGTGCGAAACCTACCCGCTACGATGGCACACCGACCGAGTCGAACAAGC ] [+] EMBL BM630085 [ CCGGCGAGTGCACGTGTGTGTTTCAAACGTTTTTCCTCTTTTACTGTCGTCGATACCGTTCCGGGTTCCGTGTACCGGGG GTGTGTGTGTGTTCATGTGTTTGGCGTAGGCCTTGTGATCTATTCGACACACAAAGGAACGATCGTGTTGCATCCTGTGCAAAAGGTGCATTTCTGTTGAGCATCGTAGTAGCAGCCAACGAGCCAGACAAGCGCATACAAAATGTCGCGTACGCTGGAACTGTCGCCCAATGCGCACATCAACAAGTCGCTGCTCGACAAGTACATGGCCTTGCCGATGCCGGACGGTAAAATCCAGGCGACGTACATCTGGATCGATGGCACCGGCGAGAACGTCCGCTGCAAGGACCGCACGCTAGACTTCATCCCCCAGTCGCCGAGTGAGCTCCCGATC ] [+] EMBL BM617722 [ ccgAGCGAGTGCACGTGTGTGTTTCAAACGTTTTTCC CTTTTACTGTCGTCGATACTGTTCCGGGTTCCGTGTACCGGGG GTGTGTGTGTGTGTTCATGTGTTTGGCGTAGGCCTTGTGATCTATTCGACACACAAAGGAACGATCGTGTTGCATCCTGTGCAAAAGGCGCATTTCTGTTG TCATC GCAGCCAACGAGCCAGACAAGCGCATACAAAATGTCGCGTACGCTGGAATTGTCGCCCAATGCTCACATCAACAAGTCGCTGCTCGACAAGTACATGGCCTTGCCGATGCCGGACGGTAAGATTCAGGCGACGTACATCTGGATCGATGGCACCGGCGAGAACGTCCGCTGCAAGGACCGCACGCTCGACTTCATCCCCCAG ] [+] EMBL BM617299 [ ccgGCACGTGTGTGTTTCAAACGTTTTTCC CTTTTACTGTCGTCGATACTGTTCCGGGTTCCGTGTACCGGGG GTGTGTGTGTGTGTTCATGTGTTTGGCGTAGGCCTTGTGATCTATTCGACACACAAAGGAACGATCGTGTTGCATCCTGTGCAAAAGGTGCATTTCTGTTG TCATC GCAGCCAACGAGCCAGACAAGCGCATACAAAATGTCGCGTACGCTGGAATTGTCGCCCAATGCTCACATCAACAAGTCGCTGCTCGACAAGTACATGGCCTTGCCGATGCCGGACGGTAAGATTCAGGCGACGTACATCTGGATCGATGGCACCGGCGAGAACGTCCGCTGCAAGGACCGCACGCTCGACTTCATCCCCCAGTCACCGAGTGAGCTCCCGATCTGGAACTACGATGGCAGCTCGACGTACCAGGCGGAGGGTTCG AACTCGGACGTGTACCTGCACCCGGTCGCGATCTATCGCGATCCGTTCCGCCGTGGCAACAACATCCTCGTGCTGTGCGAAACCTA CCGCTACGATGGCACACCGACCGAGTCGAACAAGCGCAAGGCGTGCCTGGAGGTGTGCGAGCGGGCGGCCGAAGAACAGCCGTGGTTCGGTATCGAGCAGGAGTACACG ] [+] EMBL BM623097 [ GTGTGTTTCAAACGTTTTTCC CTTTTACTGTCGTCGATACCGTTCCGGGTTCCGTGTACCGGGG GTGTGTGTGTGTTCATGTGTTTGGCGTAGGCCTTGTGATCTATTCGACACACAAAGGAACGATCGTGTTGCATCCTGTGCAAAAGGTGCATTTCTGTTGAGCATCGTAGTAGCAGCCAACGAGCCAGACAAGCGCATACAAAATGTCGCGTACGCTGGAACTGTCGCCCAATGCGCACATCAACAAGTCGCTGCTCGACAAGTACATGGCCTTGCCGATGCCGGACGGTAAAATCCAGGCGACGTACATCTGGATCGATGGCACCGGCGAGAACGTCCGCTGCAAGGACCGCACGCTAGACTTCATCCCCCAGTCGCCGAGTGAGCTCCCGATCTGGAACTACGATGGCAGCTCGACGTACCAGGCGGAGGGTTCGAAACTCGGACGTGTACCTGCACCCGGTCGCGA ] [+] EMBL BM635808 [ ccgGTTTCAAACGTTTTTCC CTTTTACTGTCGTCGATACTGTTCCGGGTTCCGTGTACCGGGG GTGTGTGTGTGTGTTCATGTGTTTGGCGTAGGCCTTGTGATCTATTCGACACACAAAGGAACGATCGTGTTGCATCCTGTGCAAAAGGTGCATTTCTGTTG TCATC GCAGCCAACGAGCCAGACAAGCGCATACAAAATGTCGCGTACGCTGGAATTGTCGCCCAATGCTCACATCAACAAGTCGCTGCTCGACAAGTACATGGCCTTGCCGATGCCGGACGGTAAGATTCAGGCGACGTACATCTGGATCGATGGCACCGGCGAGAACGTCCGCTGCAAGGACCGCACGCTCGACTTCATCCCCCAGTCACCGAGTGAGCTCCCGATCTGGAACTACGATGGCAGCTCGACGTACCAGGCGGAGGGTTCG AACTCGGACGTGTACCTGCACCCGGTCGCGATCTATCGCGATCCGTTCCGCCGTGGCAACAACATCCTCGTGCTGTGCGAAACCTA CCGCTACGATGGCACACCGACCGAGTCGAACAAGCGCAAGGCGTGCCTGGAGGTGTGCGAGCGGGCGGCCGAAGAGCAGCCGTGGTTCGGTATCGAGCAGGA ] [+] EMBL BM620913 [ ccgAAACGTTTTTCC CTTTTACTGTCGTCGATACTGTTCCGGGTTCCGTGTACCGGGG GTGTGTGTGTGTGTTCATGTGTTTGGCGTAGGCCTTGTGATCTATTCGACACACAAAGGAACGATCGTGTTGCATCCTGTGCAAAAGGTGCATTTCTGTTG TCATC GCAGCCAACGAGCCAGACAAGCGCATACAAAATGTCGCGTACGCTGGAATTGTCGCCCAATGCTCACATCAACAAGTCGCTGCTCGACAAGTACATGGCCTTGCCGATGCCGGACGGTAAGATTCAGGCGACGTACATCTGGATCGATGGCACCGGCGAGAACGTCCGCTGCAAGGACCGCACGCTCGACTTCATCCCCCAGTCACCGAGTGAGCTCCCGATCTGGAACTACGATGGCAGCTCGACGTACCAGGCGGAGGGTTCG AACTCGGACGTGTACCTGCACCCGGTCGCGATCTATCGCGATCCGTTCCGCCGTGGCAACAACATCCTCGTGCTGTGCGAAACCTA CCGCTACGATGGCACACCGACCGAGTCGAACAAGCGCAAGGCGTGCCTGGAGGTGTGCGAGCGGGCGGCCGAGGAGCAGCCGTGGTTCGGTATCGAGCAGGAGTACACGCTGC TGGGATGTGGATGGTCGTCCGCTCGGCTGGCC ] [+] EMBL BM628940 [ ccgAAACGTTTTTCC CTTTTACTGTCGTCGATACTGTTCCGGGTTCCGTGTACCGGGG GTGTGTGTGTGTGTTCATGTGTTTGGCGTAGGCCTTGTGATCTATTCGACACACAAAGGAACGATCGTGTTGCATCCTGTGCAAAAGGTGCATTTCTGTTG TCATC GCAGCCAACGAGCCAGACAAGCGCATACAAAATGTCGCGTACGCTGGAATTGTCGCCCAATGCTCACATCAACAAGTCGCTGCTCGACAAGTACATGGCCTTGCCGATGCCGGACGGTAAGATTCAGGCGACGTACATCTGGATCGATGGCACCGGCGAGAACGTCCGCTGCAAGGACCGCACGCTCGACTTCATCCCCCAGTCACCGAGTGAGCTCCCGATCTGGAACTACGATGGCAGCTCGACGTACCAGGCGGAGGGTTCG AACTCGGACGTGTACCTGCACCCGGTCGCGATCTATCGCGATCCGTTCCGCCGTGGCAACAACATCCTCGTGCTGTGCGAAACCTA CCGCTACGATGGCACACCGACCGAGTCGAACAAGCGCAAGGCGTGCCTGGAGGTGTGCGAGCGGGCGGCCGAGGAGCAGCCGTGGTTCGGTATCGAGCAGGAGTACACGCTGCTT GGATGTGGATGGTCGTCC ] [+] EMBL BM629195 [ ccgCGCTGGAACTGTCGCCCAATGCGCACATCAACAAGTCGCTGCTCGACAAGTACATGGCCTTGCCGATGCCGGACGGTAAAATCCAGGCGACGTACATCTGGATCGATGGCACCGGCGAGAACGTCCGCTGCAAGGACCGCACGCTAGACTTCATCCCCCAGTCGCCGAGTGAGCTCCCGATCTGGAACTACGATGGCAGCTCGACGTACCAGGCGGAGGGTTCG AACTCGGACGTGTACCTGCACCCGGTCGCGATCTATCGCGATCCGTTCCGCCGTGGCAACAACATCCTCGTGCTGTGCGAAACCTA CCGCTACGATGGCACACCGACCGAGTCGAACAAGCGCAAGGCGTGCCTGGAGGTGTGCGAGCGGGCGGCCGAGGAGCAGCCGTGGTTCGGTATCGAGCAGGAGTACACGCTGC T CGATGTGGATGTCCGTCCGCTCGGCTGGCCGAAGAACGGTTTCCCGGGACCGCAGGGCCCGTACTATTGCGGCGTCGGTGCGGACAAGGTGTACGCGCGCGACATCGTCGATGCGCACTATCGGGCCTGTCTGTACGCGGGCGTGAAGATTTGCGGCACGAACGCGGAAGTGATGCCGGCCCAGTGGGAGTACCAGGTGGGCCCGTGCGAGGGC ] [+] EMBL BM615388 [ ccgGTCGCCCAATGCTCACATCAACAAGTCGCTGCTCGACAAGTACATGGCCTTGCCGATGCCGGACGGTAAGATTCAGGCGACGTACATCTGGATCGATGGCACCGGCGAGAACGTCCGCTGCAAGGACCGCACGCTCGACTTCATCCCCCAGTCACCGAGTGAGCTCCCGATCTGGAACTACGATGGCAGCTCGACGTACCAGGCGGAGGGTTCG AACTCGGACGTGTACCTGCACCCGGTCGCGATCTATCGCGATCCGTTCCGCCGTGGCAACAACATCCTCGTGCTGTGCGAAACCTA CCGCTACGATGGCACACCGACCGAGTCGAACAAGCGCAAGGCGTGCCTGGAGGTGTGCGAGCGGGCGGCCGAGGAGCAGCCGTGGTTCGGTATCGAGCAGGAGTACACGCTGC T GGATGTGGATGGTCGTCCGCTCGGCTGGCCGAAGAACGGTTTCCCGGGACCGCAGGGCCCGTACTATTGCGGCGTCGGTGCGGACAAGGTGTACGCGCGCGACATCGT ] [+] EMBL BX617919 [ CGTCCGCTGCAAGGACCGCACGCTAGACTTCATCCCCCAGTCGCCGAGTGAGCTCCCGATCTGGAACTACGATGGCAGCTCGACGTACCAGGCGGAGGGTTCG AACTCGGACGTGTACCTGCACCCGGTCGCGATCTATCGCGATCCGTTCCGCCGTGGCAACAACATCCTCGTGCTGTGCGAAACCTA CCGCTACGATGGCACACCGACCGAGTCGAACAAGCGCAAGGCGTGCCTGGAGGTGTGCGAGCGGGCGGCCGAGGAGCAGCCGTGGTTCGGTATCGAGCAGGAGTACACGCTGC T CGATGTGGATGGCCGTCCGCTCGGCTGGCCGAAGAACGGTTTCCCGGGACCGCAGGGCCCGTACTATTGCGGCGTCGGTGCGGACAAGGTGTACGCGCGCGACATCGTCGATGCGCACTATCGGGCCTGTCTGTACGCGGGCGTGAAGATTTGCGGCACGAACGCGGAAGTGATGCCGGCCCAGTGGGAGTACCAGGTGGGCCCGTGCGAGGGCATCCAGATCGGGGATGATCTGTGGATGTCCCGGTTTCTGCTGCACCGCGTGGCGGAGGAGTTTGGTATCGTTGCCACGCTCGACCCGAAACCGATGCAGGGTGACTGGAACGGGGCCGGTGCGCACACGAACGTTTTCCA CAAGACGATGCGCG ] [+] EMBL BX618075 [ CGTGGCGGAGGAGTTTGGTATCGTTGCCACGCTCGACCCGAAACCGATGCAGGGCGACTGGAACGGGGCCGGTGCGCACACGAACG TTTCCACCAAGACGATGCGCGAACCGGGCGGCCTGGCGGAGATCGAAAACGCGATCAGCAAGCTGGCGAAGTGCCACGAGCGTCACATTCGCGCGTACGACCCGAACGGTGGAAAGGACAACGAGCGTCGCCTGACCGGAAAGCACGAAACTAGCTCGATCCACGATTTTAATGCCGGTGTCGCTAATCGTGGCTGTTCGATTCGTATTCCGCGTGGCGTTTCCGACCAAGGGTTCGGCTACTTCGAGGATCGCCGTCCCAGCTCCAACTGCGATCCGTACAGCGTGGCCGAGGCTATCCTGCGCACGATCATCCTCAACGAGTAAGAGACGGACCGACCGGTGTC ] [+] EMBL BX617742 [ AGCAAGCTGGCGAAGTGCCACGAGCGTCACATTCGCGCGTACGACCCGAACGGTGGAAAGGACAACGAGCGTCGCCTGACCGGAAAGCACGAAACTAGCTCGATCCACGATTTTAATGCCGGTGTCGCTAATCGTGGCTGTTCGATTCGTATTCCGCGTGGCGTTTCCGACCAAGGGTTCGGCTACTTCGAGGATCGCCGTCCCAGCTCCAACTGCGATCCGTACAGCGTGGCCGAGGCTATCCTGCGCACGATCATCCTCAACGAGTAAGAGACGGACCGACCGGTGTCGTCGTTGTCGTCGTTGTCGTTGGACATTCCACAAGCCTTTTGGAGAGTTGTATTTCCATGCTGCACCTTGAGGAAAAAAAGGAGAGAGGCGAAAGAAAAAAAAGGATGCATTCAGTAGCTACACACCGACACCGATCAGTTGTACGATCGGGTTATCTTTTTTTCGCTCTCGTTATTTTATGTTTAATTTGTGTGTGTGTATCATGGCTTTGGTTGCCTTTTTCTCCTGCTCCCTC] consensusID : consensus_9613#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 589 fasta sequence [CCGGTCGTGTGTTGTACAGTAGCAACTTCTTGAATTATTATTTGAAATTTGTAAAAAAAACAGGGCATTTTCTACACTGGTCAAGATGGGTGGAATGTCGCGTACGCTGGAATTGTCGCCCAATGCTCACATCAACAAGTCGCTGCTCGACAAGTACATGGCCTTGCCGATGCCGGACGGTAAGATTCAGGCGACGTACATCTGGATCGATGGCACCGGCGAGAACGTCCGCTGCAAGGACCGCACGCTCGACTTCATCCCCCAGTCACCGAGTGAGCTCCCGATCTGGAACTACGATGGCAGCTCGACGTACCAGGCGGAGGGTTCGAACTCGGACGTGTACCTGCACCCGGTCGCGATCTATCGCGATCCGTTCCGCCGTGGCAACAACATCCTCGTGCTGTGCGAAACCTACCGCTACGATGGCACACCGACCGAGTCGAACAAGCGCAAGGCGTGCCTGGAGGTGTGCGAGCGGGCGGCCGAGGAGCAGCCGTGGTTCGGTATCGAGCAGGAGTACACGCTGCTGGATGTGGATGGTCGTCCGCTCGGCTGGCCGAAGAACGGTTTCCCCGGACCGCAGGGCCCG] [+] EMBL BM644838 [CCGGTCGTGTGTTGTACAGTAGCAACTTCTTGAATTATTATTTGAAATTTGTAAAAAAAACAGGGCATTTTCTACACTGGTCAAGATGGGTGGAATGTCGCGTACGCTGGAATTGTCGCCCAATGCTCACATCAACAAGTCGCTGCTCGACAAGTACATGGCCTTGCCGATGCCGGACGGTAAGATTCAGGCGACGTACATCTGGATCGATGGCACCGGCGAGAACGTCCGCTGCAAGGACCGCACGCTCGACTTCATCCCCCAGTCACCGAGTGAGCTCCCGATCTGGAACTACGATGGCAGCTCGACGTACCAGGCGGAGGGTTCGAACTCGGACGTGTACCTGCACCCGGTCGCGATCTATCGCGATCCGTTCCGCCGTGGCAACAACATCCTCGTGCTGTGCGAAACCTACCGCTACGATGGCACACCGACCGAGTCGAACAAGCGCAAGGCGTGCCTGGAGGTGTGCGAGCGGGCGGCCGAGGAGCAGCCGTGGTTCGGTATCGAGCAGGAGTACACGCTGCTGGATGTGGATGGTCGTCCGCTCGGCTGGCCGAAGAACGGTTTCCCCGGACCGCAGGGCCCG] consensusID : consensus_9613#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 388 fasta sequence [CCGCGGACGCGTGGGTCGACACACAAAGGAACGATCGTGTTGCATCCTGTGCAAAAGGTGCATTTCTGTTGTCATCGCAGCCAACGAGCCAGACAAGCGCATACAAAATGTCGCGTACGCTGGAACTGTCGCCCAATGCGCACATCAACAAGTCGCTGCTCGACAAGTACATGGCCTTGCCGATGCCGGACGGTAAGATTCAGGCGACGTACATCTGGATCGATGGCACCGGCGAGAACGTCCGCTGCAAGGACCGCACGCTAGACTTCATCCCCCAGTCGCCGAGTGAGCTCCCGATCTGGAACTACGATGGCAGCTCGACGTACCAGGGGGAGGGTTCGAACTCGGACGTGTACCTGCACCCGGTCGCGATCTATCGCGATCCGTT] [+] EMBL BM650253 [CCGCGGACGCGTGGGTCGACACACAAAGGAACGATCGTGTTGCATCCTGTGCAAAAGGTGCATTTCTGTTGTCATCGCAGCCAACGAGCCAGACAAGCGCATACAAAATGTCGCGTACGCTGGAACTGTCGCCCAATGCGCACATCAACAAGTCGCTGCTCGACAAGTACATGGCCTTGCCGATGCCGGACGGTAAGATTCAGGCGACGTACATCTGGATCGATGGCACCGGCGAGAACGTCCGCTGCAAGGACCGCACGCTAGACTTCATCCCCCAGTCGCCGAGTGAGCTCCCGATCTGGAACTACGATGGCAGCTCGACGTACCAGGGGGAGGGTTCGAACTCGGACGTGTACCTGCACCCGGTCGCGATCTATCGCGATCCGTT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9613#0 CCGCGTTCGTTCTGCCAGCGAGTGCACGTGTGTGTTTCAAACGTTTTTCCCTTTTACTGT 60 consensus_9613#2 ------------------------------------------------------------ consensus_9613#1 ------------------------------------------------------------ consensus_9613#0 CGTCGATACTGTTCCGGGTTCCGTGTACCGGGGGTGTGTGTGTGTGTTCATGTGTTTGGC 120 consensus_9613#2 -----------------------------------------------------------C 1 consensus_9613#1 ------------------------------------------------------------ consensus_9613#0 GTAGGCCTTGTGATCTATTCGACACACAAAGGAACGATCGTGTTGCATCCTGTGCAAAAG 180 consensus_9613#2 CGCGGACGCGTG----GGTCGACACACAAAGGAACGATCGTGTTGCATCCTGTGCAAAAG 57 consensus_9613#1 -CCGGTCGTGTG---------TTGTACAGTAGCAACTTCTTGAATTATTATTTGAAATTT 50 ** * *** *** * * ** ** ** * ** ** consensus_9613#0 GTGCATTTCTGTTGTCATCGCAGCCAACGAGCCAGACAAGCGCATACAAAATGTCGCGTA 240 consensus_9613#2 GTGCATTTCTGTTGTCATCGCAGCCAACGAGCCAGACAAGCGCATACAAAATGTCGCGTA 117 consensus_9613#1 GTAAAAAAAACAGGGCATTTTCTACACTGGTCAAGATGGGTG------GAATGTCGCGTA 104 ** * * *** ** * * *** * * *********** consensus_9613#0 CGCTGGAATTGTCGCCCAATGCTCACATCAACAAGTCGCTGCTCGACAAGTACATGGCCT 300 consensus_9613#2 CGCTGGAACTGTCGCCCAATGCGCACATCAACAAGTCGCTGCTCGACAAGTACATGGCCT 177 consensus_9613#1 CGCTGGAATTGTCGCCCAATGCTCACATCAACAAGTCGCTGCTCGACAAGTACATGGCCT 164 ******** ************* ************************************* consensus_9613#0 TGCCGATGCCGGACGGTAAGATTCAGGCGACGTACATCTGGATCGATGGCACCGGCGAGA 360 consensus_9613#2 TGCCGATGCCGGACGGTAAGATTCAGGCGACGTACATCTGGATCGATGGCACCGGCGAGA 237 consensus_9613#1 TGCCGATGCCGGACGGTAAGATTCAGGCGACGTACATCTGGATCGATGGCACCGGCGAGA 224 ************************************************************ consensus_9613#0 ACGTCCGCTGCAAGGACCGCACGCTCGACTTCATCCCCCAGTCACCGAGTGAGCTCCCGA 420 consensus_9613#2 ACGTCCGCTGCAAGGACCGCACGCTAGACTTCATCCCCCAGTCGCCGAGTGAGCTCCCGA 297 consensus_9613#1 ACGTCCGCTGCAAGGACCGCACGCTCGACTTCATCCCCCAGTCACCGAGTGAGCTCCCGA 284 ************************* ***************** **************** consensus_9613#0 TCTGGAACTACGATGGCAGCTCGACGTACCAGGCGGAGGGTTCGAACTCGGACGTGTACC 480 consensus_9613#2 TCTGGAACTACGATGGCAGCTCGACGTACCAGGGGGAGGGTTCGAACTCGGACGTGTACC 357 consensus_9613#1 TCTGGAACTACGATGGCAGCTCGACGTACCAGGCGGAGGGTTCGAACTCGGACGTGTACC 344 ********************************* ************************** consensus_9613#0 TGCACCCGGTCGCGATCTATCGCGATCCGTTCCGCCGTGGCAACAACATCCTCGTGCTGT 540 consensus_9613#2 TGCACCCGGTCGCGATCTATCGCGATCCGTT----------------------------- 388 consensus_9613#1 TGCACCCGGTCGCGATCTATCGCGATCCGTTCCGCCGTGGCAACAACATCCTCGTGCTGT 404 ******************************* consensus_9613#0 GCGAAACCTACCGCTACGATGGCACACCGACCGAGTCGAACAAGCGCAAGGCGTGCCTGG 600 consensus_9613#2 ------------------------------------------------------------ consensus_9613#1 GCGAAACCTACCGCTACGATGGCACACCGACCGAGTCGAACAAGCGCAAGGCGTGCCTGG 464 consensus_9613#0 AGGTGTGCGAGCGGGCGGCCGAGGAGCAGCCGTGGTTCGGTATCGAGCAGGAGTACACGC 660 consensus_9613#2 ------------------------------------------------------------ consensus_9613#1 AGGTGTGCGAGCGGGCGGCCGAGGAGCAGCCGTGGTTCGGTATCGAGCAGGAGTACACGC 524 consensus_9613#0 TGCTGGATGTGGATGGTCGTCCGCTCGGCTGGCCGAAGAACGGTTTCCCGGGACCGCAGG 720 consensus_9613#2 ------------------------------------------------------------ consensus_9613#1 TGCTGGATGTGGATGGTCGTCCGCTCGGCTGGCCGAAGAACGGTTTCCCCGGACCGCAGG 584 consensus_9613#0 GCCCGTACTATTGCGGCGTCGGTGCGGACAAGGTGTACGCGCGCGACATCGTCGATGCGC 780 consensus_9613#2 ------------------------------------------------------------ consensus_9613#1 GCCCG------------------------------------------------------- 589 consensus_9613#0 ACTATCGGGCCTGTCTGTACGCGGGCGTGAAGATTTGCGGCACGAACGCGGAAGTGATGC 840 consensus_9613#2 ------------------------------------------------------------ consensus_9613#1 ------------------------------------------------------------ consensus_9613#0 CGGCCCAGTGGGAGTACCAGGTGGGCCCGTGCGAGGGCATCCAGATCGGGGATGATCTGT 900 consensus_9613#2 ------------------------------------------------------------ consensus_9613#1 ------------------------------------------------------------ consensus_9613#0 GGATGTCCCGGTTTCTGCTGCACCGCGTGGCGGAGGAGTTTGGTATCGTTGCCACGCTCG 960 consensus_9613#2 ------------------------------------------------------------ consensus_9613#1 ------------------------------------------------------------ consensus_9613#0 ACCCGAAACCGATGCAGGGTGACTGGAACGGGGCCGGTGCGCACACGAACGTTTTCCACA 1020 consensus_9613#2 ------------------------------------------------------------ consensus_9613#1 ------------------------------------------------------------ consensus_9613#0 AGACGATGCGCGAACCGGGCGGCCTGGCGGAGATCGAAAACGCGATCAGCAAGCTGGCGA 1080 consensus_9613#2 ------------------------------------------------------------ consensus_9613#1 ------------------------------------------------------------ consensus_9613#0 AGTGCCACGAGCGTCACATTCGCGCGTACGACCCGAACGGTGGAAAGGACAACGAGCGTC 1140 consensus_9613#2 ------------------------------------------------------------ consensus_9613#1 ------------------------------------------------------------ consensus_9613#0 GCCTGACCGGAAAGCACGAAACTAGCTCGATCCACGATTTTAATGCCGGTGTCGCTAATC 1200 consensus_9613#2 ------------------------------------------------------------ consensus_9613#1 ------------------------------------------------------------ consensus_9613#0 GTGGCTGTTCGATTCGTATTCCGCGTGGCGTTTCCGACCAAGGGTTCGGCTACTTCGAGG 1260 consensus_9613#2 ------------------------------------------------------------ consensus_9613#1 ------------------------------------------------------------ consensus_9613#0 ATCGCCGTCCCAGCTCCAACTGCGATCCGTACAGCGTGGCCGAGGCTATCCTGCGCACGA 1320 consensus_9613#2 ------------------------------------------------------------ consensus_9613#1 ------------------------------------------------------------ consensus_9613#0 TCATCCTCAACGAGTAAGAGACGGACCGACCGGTGTCGTCGTTGTCGTCGTTGTCGTTGG 1380 consensus_9613#2 ------------------------------------------------------------ consensus_9613#1 ------------------------------------------------------------ consensus_9613#0 ACATTCCACAAGCCTTTTGGAGAGTTGTATTTCCATGCTGCACCTTGAGGAAAAAAAGGA 1440 consensus_9613#2 ------------------------------------------------------------ consensus_9613#1 ------------------------------------------------------------ consensus_9613#0 GAGAGGCGAAAGAAAAAAAAGGATGCATTCAGTAGCTACACACCGACACCGATCAGTTGT 1500 consensus_9613#2 ------------------------------------------------------------ consensus_9613#1 ------------------------------------------------------------ consensus_9613#0 ACGATCGGGTTATCTTTTTTTCGCTCTCGTTATTTTATGTTTAATTTGTGTGTGTGTATC 1560 consensus_9613#2 ------------------------------------------------------------ consensus_9613#1 ------------------------------------------------------------ consensus_9613#0 ATGGCTTTGGTTGCCTTTTTCTCCTGCTCCCTC 1593 consensus_9613#2 --------------------------------- consensus_9613#1 --------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||