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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9613#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 16 consensus length = 1593 fasta sequence
[CCGCGTTCGTTCTGCCAGCGAGTGCACGTGTGTGTTTCAAACGTTTTTCC-CTTTTACTGTCGTCGATACTGTTCCGGGTTCCGTGTACCGGGG-GTGTGTGTGTGTGTTCATGTGTTTGGCGTAGGCCTTGTGATCTATTCGACACACAAAGGAACGATCGTGTTGCATCCTGTGCAAAAGGTGCATTTCTGTTG-TCATC------GCAGCCAACGAGCCAGACAAGCGCATACAAAATGTCGCGTACGCTGGAATTGTCGCCCAATGCTCACATCAACAAGTCGCTGCTCGACAAGTACATGGCCTTGCCGATGCCGGACGGTAAGATTCAGGCGACGTACATCTGGATCGATGGCACCGGCGAGAACGTCCGCTGCAAGGACCGCACGCTCGACTTCATCCCCCAGTCACCGAGTGAGCTCCCGATCTGGAACTACGATGGCAGCTCGACGTACCAGGCGGAGGGTTCG-AACTCGGACGTGTACCTGCACCCGGTCGCGATCTATCGCGATCCGTTCCGCCGTGGCAACAACATCCTCGTGCTGTGCGAAACCTA-CCGCTACGATGGCACACCGACCGAGTCGAACAAGCGCAAGGCGTGCCTGGAGGTGTGCGAGCGGGCGGCCGAGGAGCAGCCGTGGTTCGGTATCGAGCAGGAGTACACGCTGC-T-GGATGTGGATGGTCGTCCGCTCGGCTGGCCGAAGAACGGTTTCCCGGGACCGCAGGGCCCGTACTATTGCGGCGTCGGTGCGGACAAGGTGTACGCGCGCGACATCGTCGATGCGCACTATCGGGCCTGTCTGTACGCGGGCGTGAAGATTTGCGGCACGAACGCGGAAGTGATGCCGGCCCAGTGGGAGTACCAGGTGGGCCCGTGCGAGGGCATCCAGATCGGGGATGATCTGTGGATGTCCCGGTTTCTGCTGCACCGCGTGGCGGAGGAGTTTGGTATCGTTGCCACGCTCGACCCGAAACCGATGCAGGGTGACTGGAACGGGGCCGGTGCGCACACGAACGTTTTCCA-CAAGACGATGCGCGAACCGGGCGGCCTGGCGGAGATCGAAAACGCGATCAGCAAGCTGGCGAAGTGCCACGAGCGTCACATTCGCGCGTACGACCCGAACGGTGGAAAGGACAACGAGCGTCGCCTGACCGGAAAGCACGAAACTAGCTCGATCCACGATTTTAATGCCGGTGTCGCTAATCGTGGCTGTTCGATTCGTATTCCGCGTGGCGTTTCCGACCAAGGGTTCGGCTACTTCGAGGATCGCCGTCCCAGCTCCAACTGCGATCCGTACAGCGTGGCCGAGGCTATCCTGCGCACGATCATCCTCAACGAGTAAGAGACGGACCGACCGGTGTCGTCGTTGTCGTCGTTGTCGTTGGACATTCCACAAGCCTTTTGGAGAGTTGTATTTCCATGCTGCACCTTGAGGAAAAAAAGGAGAGAGGCGAAAGAAAAAAAAGGATGCATTCAGTAGCTACACACCGACACCGATCAGTTGTACGATCGGGTTATCTTTTTTTCGCTCTCGTTATTTTATGTTTAATTTGTGTGTGTGTATCATGGCTTTGGTTGCCTTTTTCTCCTGCTCCCTC]
[+] EMBL BM576888 [CCGCGTTCGTTCTGCCAGCGAGTGCACGTGTGTGTTTCAAACGTTTTTCC CTTTTACTGTCGTCGATACTGTTCCGGGTTCCGTGTACCGGGG GTGTGTGTGTGTGTTCATGTGTTTGGCGTAGGCCTTGTGATCTATTCGACACACAAAGGAACGATCGTGTTGCATCCTGTGCAAAAGGTGCATTTCTGTTG TCATC GCAGCCAACGAGCCAGACAAGCGCATACAAAATGTCGCGTACGCTGGAATTGTCGCCCAATGCTCACATCAACAAGTCGCTGCTCGACAAGTACATGGCCTTGCCGATGCCGGACGGTAAGATTCAGGCGACGTACATCTGGATCGATGGCACCGGCGAGAACGTCCGCTGCAAGGACCGCACGCTCGACTTCATCCCCCAGTCACCGAGTGAGCTCCCGATCTGGAACTACGATGGCAGCTCGACGTACCAGGCGGAGGGTTCG AACTCGGACGTGTACCTGCACCCGGTCGCGATCTATCGCGATCCGTTCCGCCGTGGCAACAACATCCTCGTGCTGTGCGAAACCTA CCGCTACGATGGCACACCGACCGAGTCGAACAAGCGCAAGGCGTGCCTGGAGGTGTGCGAGCGGGCGG ]
[+] EMBL BM649382 [CCG GTTCGTTCTGCCAGCGAGTGCACGTGTGTGTTTCAAACGTTTTTCC CTTTTACTGTCGTCGATACTGTTCCGGGTTCCGTGTACCGGGG GTGTGTGTGTGTGTTCATGTGTTTGGCGTAGGCCTTGTGATCTATTCGACACACAAAGGAACGATCGTGTTGCATCCTGTGCAAAAGGTGCATTTCTGTTG TCATC GCAGCCAACGAGCCAGACAAGCGCATACAAAATGTCGCGTACGCTGGAATTGTCGCCCAATGCTCACATCAACAAGTCGCTGCTCGACAAGTACATGGCCTTGCCGATGCCGGACGGTAAGATTCAGGCGACGTACATCTGGATCGATGGCACCGGCGAGAACGTCCGCTGCAAGGACCGCACGCTCGACTTCATCCCCCAGTCACCGAGTGAGCTCCCGATCTGGAACTACGATGGCAGCTCGACGTACCAGGCGGAGGGTTCG AACTCGGACGTGTACCTGCACCCGGTCGCGATCTATCGCGATCCGTTCCGCCGTGGCAACAACATCCTCGTGCTGTGCGAAACCTA CCGCTACGATGGCACACCGACCGAGTCGAACAAGCGCAAGGCGTGCCTGGAGGTGTGCGAGCGGGCGGCCGTAGAACAGCCGTGGTTCGGTATCGA ]
[+] EMBL BM612537 [ ccgGCCAGCGAGTGCACGTGTGTGTTTCAAACGCTTTTCC CTTTTACTGTCGTCGATACCGTTCCGGGTTCCGTGTACCGGGGTGTGTGTGTGTGTGTTCATGTGTTTGGCGTAGGCCTTGTGATCTATTCGACACACAAAGGAACGATCGTGTTGCATCCTGTGCAAAAGGTGCATTTCTGTTG TCATC GCAGCCAACGAGCCAGACAAGCGCATACAAAATGTCGCGTACGCTGGAACTGTCGCCCAATGCGCACATCAACAAGTCGCTGCTCGACAAGTACATGGCCTTGCCGATGCCGGACGGTAAGATTCAGGCGACGTACATCTGGATCGATGGCACCGGCGAGAACGTCCGCTGCAAGGACCGCACGCTAGACTTCATCCCCCAGTCGCCGAGTGAGCTCCCGATCTGGAACTACGATGGCAGCTCGACGTACCAGGCGGAGGGTTCG AACTCGGACGTGTACCTGCACCCGGTCGCGATCTATCGCGATCCGTTCCGCCGTGGCAACAACATCCTCGTGCTGTGCGAAACCT ]
[+] EMBL BM576164 [ ccgGCCAGCGAGTGCACGTGTGTGTTTCAAACGTTTTTCC CTTTTACTGTCGTCGATACTGTTCCGGGTTCCGTGTACCGGGG GTGTGTGTGTGTGTTCATGTGTTTGGCGTAGGCCTTGTGATCTATTCGACACACAAAGGAACGATCGTGTTGCATCCTGTGCAAAAGGTGCATTTCTGTTG TCATC GCAGCCAACGAGCCAGACAAGCGCATACAAAATGTCGCGTACGCTGGAATTGTCGCCCAATGCTCACATCAACAAGTCGCTGCTCGACAAGTACATGGCCTTGCCGATGCCGGACGGTAAGATTCAGGCGACGTACATCTGGATCGATGGCACCGGCGAGAACGTCCGCTGCAAGGACCGCACGCTCGACTTCATCCCCCAGTCACCGAGTGAGCTCCCGATCTGGAACTACGATGGCAGCTCGACGTACCAGGCGGAGGGTTCG AACTCGGACGTGTACCTGCACCCGGTCGCGATCTATCGCGATCCGTTCCGCCGTGGCAACAACATCCTCGTGCTGTGCGAAACCTACCCGCTACGATGGCACACCGACCGAGTCGAACAAGC ]
[+] EMBL BM630085 [ CCGGCGAGTGCACGTGTGTGTTTCAAACGTTTTTCCTCTTTTACTGTCGTCGATACCGTTCCGGGTTCCGTGTACCGGGG GTGTGTGTGTGTTCATGTGTTTGGCGTAGGCCTTGTGATCTATTCGACACACAAAGGAACGATCGTGTTGCATCCTGTGCAAAAGGTGCATTTCTGTTGAGCATCGTAGTAGCAGCCAACGAGCCAGACAAGCGCATACAAAATGTCGCGTACGCTGGAACTGTCGCCCAATGCGCACATCAACAAGTCGCTGCTCGACAAGTACATGGCCTTGCCGATGCCGGACGGTAAAATCCAGGCGACGTACATCTGGATCGATGGCACCGGCGAGAACGTCCGCTGCAAGGACCGCACGCTAGACTTCATCCCCCAGTCGCCGAGTGAGCTCCCGATC ]
[+] EMBL BM617722 [ ccgAGCGAGTGCACGTGTGTGTTTCAAACGTTTTTCC CTTTTACTGTCGTCGATACTGTTCCGGGTTCCGTGTACCGGGG GTGTGTGTGTGTGTTCATGTGTTTGGCGTAGGCCTTGTGATCTATTCGACACACAAAGGAACGATCGTGTTGCATCCTGTGCAAAAGGCGCATTTCTGTTG TCATC GCAGCCAACGAGCCAGACAAGCGCATACAAAATGTCGCGTACGCTGGAATTGTCGCCCAATGCTCACATCAACAAGTCGCTGCTCGACAAGTACATGGCCTTGCCGATGCCGGACGGTAAGATTCAGGCGACGTACATCTGGATCGATGGCACCGGCGAGAACGTCCGCTGCAAGGACCGCACGCTCGACTTCATCCCCCAG ]
[+] EMBL BM617299 [ ccgGCACGTGTGTGTTTCAAACGTTTTTCC CTTTTACTGTCGTCGATACTGTTCCGGGTTCCGTGTACCGGGG GTGTGTGTGTGTGTTCATGTGTTTGGCGTAGGCCTTGTGATCTATTCGACACACAAAGGAACGATCGTGTTGCATCCTGTGCAAAAGGTGCATTTCTGTTG TCATC GCAGCCAACGAGCCAGACAAGCGCATACAAAATGTCGCGTACGCTGGAATTGTCGCCCAATGCTCACATCAACAAGTCGCTGCTCGACAAGTACATGGCCTTGCCGATGCCGGACGGTAAGATTCAGGCGACGTACATCTGGATCGATGGCACCGGCGAGAACGTCCGCTGCAAGGACCGCACGCTCGACTTCATCCCCCAGTCACCGAGTGAGCTCCCGATCTGGAACTACGATGGCAGCTCGACGTACCAGGCGGAGGGTTCG AACTCGGACGTGTACCTGCACCCGGTCGCGATCTATCGCGATCCGTTCCGCCGTGGCAACAACATCCTCGTGCTGTGCGAAACCTA CCGCTACGATGGCACACCGACCGAGTCGAACAAGCGCAAGGCGTGCCTGGAGGTGTGCGAGCGGGCGGCCGAAGAACAGCCGTGGTTCGGTATCGAGCAGGAGTACACG ]
[+] EMBL BM623097 [ GTGTGTTTCAAACGTTTTTCC CTTTTACTGTCGTCGATACCGTTCCGGGTTCCGTGTACCGGGG GTGTGTGTGTGTTCATGTGTTTGGCGTAGGCCTTGTGATCTATTCGACACACAAAGGAACGATCGTGTTGCATCCTGTGCAAAAGGTGCATTTCTGTTGAGCATCGTAGTAGCAGCCAACGAGCCAGACAAGCGCATACAAAATGTCGCGTACGCTGGAACTGTCGCCCAATGCGCACATCAACAAGTCGCTGCTCGACAAGTACATGGCCTTGCCGATGCCGGACGGTAAAATCCAGGCGACGTACATCTGGATCGATGGCACCGGCGAGAACGTCCGCTGCAAGGACCGCACGCTAGACTTCATCCCCCAGTCGCCGAGTGAGCTCCCGATCTGGAACTACGATGGCAGCTCGACGTACCAGGCGGAGGGTTCGAAACTCGGACGTGTACCTGCACCCGGTCGCGA ]
[+] EMBL BM635808 [ ccgGTTTCAAACGTTTTTCC CTTTTACTGTCGTCGATACTGTTCCGGGTTCCGTGTACCGGGG GTGTGTGTGTGTGTTCATGTGTTTGGCGTAGGCCTTGTGATCTATTCGACACACAAAGGAACGATCGTGTTGCATCCTGTGCAAAAGGTGCATTTCTGTTG TCATC GCAGCCAACGAGCCAGACAAGCGCATACAAAATGTCGCGTACGCTGGAATTGTCGCCCAATGCTCACATCAACAAGTCGCTGCTCGACAAGTACATGGCCTTGCCGATGCCGGACGGTAAGATTCAGGCGACGTACATCTGGATCGATGGCACCGGCGAGAACGTCCGCTGCAAGGACCGCACGCTCGACTTCATCCCCCAGTCACCGAGTGAGCTCCCGATCTGGAACTACGATGGCAGCTCGACGTACCAGGCGGAGGGTTCG AACTCGGACGTGTACCTGCACCCGGTCGCGATCTATCGCGATCCGTTCCGCCGTGGCAACAACATCCTCGTGCTGTGCGAAACCTA CCGCTACGATGGCACACCGACCGAGTCGAACAAGCGCAAGGCGTGCCTGGAGGTGTGCGAGCGGGCGGCCGAAGAGCAGCCGTGGTTCGGTATCGAGCAGGA ]
[+] EMBL BM620913 [ ccgAAACGTTTTTCC CTTTTACTGTCGTCGATACTGTTCCGGGTTCCGTGTACCGGGG GTGTGTGTGTGTGTTCATGTGTTTGGCGTAGGCCTTGTGATCTATTCGACACACAAAGGAACGATCGTGTTGCATCCTGTGCAAAAGGTGCATTTCTGTTG TCATC GCAGCCAACGAGCCAGACAAGCGCATACAAAATGTCGCGTACGCTGGAATTGTCGCCCAATGCTCACATCAACAAGTCGCTGCTCGACAAGTACATGGCCTTGCCGATGCCGGACGGTAAGATTCAGGCGACGTACATCTGGATCGATGGCACCGGCGAGAACGTCCGCTGCAAGGACCGCACGCTCGACTTCATCCCCCAGTCACCGAGTGAGCTCCCGATCTGGAACTACGATGGCAGCTCGACGTACCAGGCGGAGGGTTCG AACTCGGACGTGTACCTGCACCCGGTCGCGATCTATCGCGATCCGTTCCGCCGTGGCAACAACATCCTCGTGCTGTGCGAAACCTA CCGCTACGATGGCACACCGACCGAGTCGAACAAGCGCAAGGCGTGCCTGGAGGTGTGCGAGCGGGCGGCCGAGGAGCAGCCGTGGTTCGGTATCGAGCAGGAGTACACGCTGC TGGGATGTGGATGGTCGTCCGCTCGGCTGGCC ]
[+] EMBL BM628940 [ ccgAAACGTTTTTCC CTTTTACTGTCGTCGATACTGTTCCGGGTTCCGTGTACCGGGG GTGTGTGTGTGTGTTCATGTGTTTGGCGTAGGCCTTGTGATCTATTCGACACACAAAGGAACGATCGTGTTGCATCCTGTGCAAAAGGTGCATTTCTGTTG TCATC GCAGCCAACGAGCCAGACAAGCGCATACAAAATGTCGCGTACGCTGGAATTGTCGCCCAATGCTCACATCAACAAGTCGCTGCTCGACAAGTACATGGCCTTGCCGATGCCGGACGGTAAGATTCAGGCGACGTACATCTGGATCGATGGCACCGGCGAGAACGTCCGCTGCAAGGACCGCACGCTCGACTTCATCCCCCAGTCACCGAGTGAGCTCCCGATCTGGAACTACGATGGCAGCTCGACGTACCAGGCGGAGGGTTCG AACTCGGACGTGTACCTGCACCCGGTCGCGATCTATCGCGATCCGTTCCGCCGTGGCAACAACATCCTCGTGCTGTGCGAAACCTA CCGCTACGATGGCACACCGACCGAGTCGAACAAGCGCAAGGCGTGCCTGGAGGTGTGCGAGCGGGCGGCCGAGGAGCAGCCGTGGTTCGGTATCGAGCAGGAGTACACGCTGCTT GGATGTGGATGGTCGTCC ]
[+] EMBL BM629195 [ ccgCGCTGGAACTGTCGCCCAATGCGCACATCAACAAGTCGCTGCTCGACAAGTACATGGCCTTGCCGATGCCGGACGGTAAAATCCAGGCGACGTACATCTGGATCGATGGCACCGGCGAGAACGTCCGCTGCAAGGACCGCACGCTAGACTTCATCCCCCAGTCGCCGAGTGAGCTCCCGATCTGGAACTACGATGGCAGCTCGACGTACCAGGCGGAGGGTTCG AACTCGGACGTGTACCTGCACCCGGTCGCGATCTATCGCGATCCGTTCCGCCGTGGCAACAACATCCTCGTGCTGTGCGAAACCTA CCGCTACGATGGCACACCGACCGAGTCGAACAAGCGCAAGGCGTGCCTGGAGGTGTGCGAGCGGGCGGCCGAGGAGCAGCCGTGGTTCGGTATCGAGCAGGAGTACACGCTGC T CGATGTGGATGTCCGTCCGCTCGGCTGGCCGAAGAACGGTTTCCCGGGACCGCAGGGCCCGTACTATTGCGGCGTCGGTGCGGACAAGGTGTACGCGCGCGACATCGTCGATGCGCACTATCGGGCCTGTCTGTACGCGGGCGTGAAGATTTGCGGCACGAACGCGGAAGTGATGCCGGCCCAGTGGGAGTACCAGGTGGGCCCGTGCGAGGGC ]
[+] EMBL BM615388 [ ccgGTCGCCCAATGCTCACATCAACAAGTCGCTGCTCGACAAGTACATGGCCTTGCCGATGCCGGACGGTAAGATTCAGGCGACGTACATCTGGATCGATGGCACCGGCGAGAACGTCCGCTGCAAGGACCGCACGCTCGACTTCATCCCCCAGTCACCGAGTGAGCTCCCGATCTGGAACTACGATGGCAGCTCGACGTACCAGGCGGAGGGTTCG AACTCGGACGTGTACCTGCACCCGGTCGCGATCTATCGCGATCCGTTCCGCCGTGGCAACAACATCCTCGTGCTGTGCGAAACCTA CCGCTACGATGGCACACCGACCGAGTCGAACAAGCGCAAGGCGTGCCTGGAGGTGTGCGAGCGGGCGGCCGAGGAGCAGCCGTGGTTCGGTATCGAGCAGGAGTACACGCTGC T GGATGTGGATGGTCGTCCGCTCGGCTGGCCGAAGAACGGTTTCCCGGGACCGCAGGGCCCGTACTATTGCGGCGTCGGTGCGGACAAGGTGTACGCGCGCGACATCGT ]
[+] EMBL BX617919 [ CGTCCGCTGCAAGGACCGCACGCTAGACTTCATCCCCCAGTCGCCGAGTGAGCTCCCGATCTGGAACTACGATGGCAGCTCGACGTACCAGGCGGAGGGTTCG AACTCGGACGTGTACCTGCACCCGGTCGCGATCTATCGCGATCCGTTCCGCCGTGGCAACAACATCCTCGTGCTGTGCGAAACCTA CCGCTACGATGGCACACCGACCGAGTCGAACAAGCGCAAGGCGTGCCTGGAGGTGTGCGAGCGGGCGGCCGAGGAGCAGCCGTGGTTCGGTATCGAGCAGGAGTACACGCTGC T CGATGTGGATGGCCGTCCGCTCGGCTGGCCGAAGAACGGTTTCCCGGGACCGCAGGGCCCGTACTATTGCGGCGTCGGTGCGGACAAGGTGTACGCGCGCGACATCGTCGATGCGCACTATCGGGCCTGTCTGTACGCGGGCGTGAAGATTTGCGGCACGAACGCGGAAGTGATGCCGGCCCAGTGGGAGTACCAGGTGGGCCCGTGCGAGGGCATCCAGATCGGGGATGATCTGTGGATGTCCCGGTTTCTGCTGCACCGCGTGGCGGAGGAGTTTGGTATCGTTGCCACGCTCGACCCGAAACCGATGCAGGGTGACTGGAACGGGGCCGGTGCGCACACGAACGTTTTCCA CAAGACGATGCGCG ]
[+] EMBL BX618075 [ CGTGGCGGAGGAGTTTGGTATCGTTGCCACGCTCGACCCGAAACCGATGCAGGGCGACTGGAACGGGGCCGGTGCGCACACGAACG TTTCCACCAAGACGATGCGCGAACCGGGCGGCCTGGCGGAGATCGAAAACGCGATCAGCAAGCTGGCGAAGTGCCACGAGCGTCACATTCGCGCGTACGACCCGAACGGTGGAAAGGACAACGAGCGTCGCCTGACCGGAAAGCACGAAACTAGCTCGATCCACGATTTTAATGCCGGTGTCGCTAATCGTGGCTGTTCGATTCGTATTCCGCGTGGCGTTTCCGACCAAGGGTTCGGCTACTTCGAGGATCGCCGTCCCAGCTCCAACTGCGATCCGTACAGCGTGGCCGAGGCTATCCTGCGCACGATCATCCTCAACGAGTAAGAGACGGACCGACCGGTGTC ]
[+] EMBL BX617742 [ AGCAAGCTGGCGAAGTGCCACGAGCGTCACATTCGCGCGTACGACCCGAACGGTGGAAAGGACAACGAGCGTCGCCTGACCGGAAAGCACGAAACTAGCTCGATCCACGATTTTAATGCCGGTGTCGCTAATCGTGGCTGTTCGATTCGTATTCCGCGTGGCGTTTCCGACCAAGGGTTCGGCTACTTCGAGGATCGCCGTCCCAGCTCCAACTGCGATCCGTACAGCGTGGCCGAGGCTATCCTGCGCACGATCATCCTCAACGAGTAAGAGACGGACCGACCGGTGTCGTCGTTGTCGTCGTTGTCGTTGGACATTCCACAAGCCTTTTGGAGAGTTGTATTTCCATGCTGCACCTTGAGGAAAAAAAGGAGAGAGGCGAAAGAAAAAAAAGGATGCATTCAGTAGCTACACACCGACACCGATCAGTTGTACGATCGGGTTATCTTTTTTTCGCTCTCGTTATTTTATGTTTAATTTGTGTGTGTGTATCATGGCTTTGGTTGCCTTTTTCTCCTGCTCCCTC]
consensusID : consensus_9613#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 589 fasta sequence
[CCGGTCGTGTGTTGTACAGTAGCAACTTCTTGAATTATTATTTGAAATTTGTAAAAAAAACAGGGCATTTTCTACACTGGTCAAGATGGGTGGAATGTCGCGTACGCTGGAATTGTCGCCCAATGCTCACATCAACAAGTCGCTGCTCGACAAGTACATGGCCTTGCCGATGCCGGACGGTAAGATTCAGGCGACGTACATCTGGATCGATGGCACCGGCGAGAACGTCCGCTGCAAGGACCGCACGCTCGACTTCATCCCCCAGTCACCGAGTGAGCTCCCGATCTGGAACTACGATGGCAGCTCGACGTACCAGGCGGAGGGTTCGAACTCGGACGTGTACCTGCACCCGGTCGCGATCTATCGCGATCCGTTCCGCCGTGGCAACAACATCCTCGTGCTGTGCGAAACCTACCGCTACGATGGCACACCGACCGAGTCGAACAAGCGCAAGGCGTGCCTGGAGGTGTGCGAGCGGGCGGCCGAGGAGCAGCCGTGGTTCGGTATCGAGCAGGAGTACACGCTGCTGGATGTGGATGGTCGTCCGCTCGGCTGGCCGAAGAACGGTTTCCCCGGACCGCAGGGCCCG]
[+] EMBL BM644838 [CCGGTCGTGTGTTGTACAGTAGCAACTTCTTGAATTATTATTTGAAATTTGTAAAAAAAACAGGGCATTTTCTACACTGGTCAAGATGGGTGGAATGTCGCGTACGCTGGAATTGTCGCCCAATGCTCACATCAACAAGTCGCTGCTCGACAAGTACATGGCCTTGCCGATGCCGGACGGTAAGATTCAGGCGACGTACATCTGGATCGATGGCACCGGCGAGAACGTCCGCTGCAAGGACCGCACGCTCGACTTCATCCCCCAGTCACCGAGTGAGCTCCCGATCTGGAACTACGATGGCAGCTCGACGTACCAGGCGGAGGGTTCGAACTCGGACGTGTACCTGCACCCGGTCGCGATCTATCGCGATCCGTTCCGCCGTGGCAACAACATCCTCGTGCTGTGCGAAACCTACCGCTACGATGGCACACCGACCGAGTCGAACAAGCGCAAGGCGTGCCTGGAGGTGTGCGAGCGGGCGGCCGAGGAGCAGCCGTGGTTCGGTATCGAGCAGGAGTACACGCTGCTGGATGTGGATGGTCGTCCGCTCGGCTGGCCGAAGAACGGTTTCCCCGGACCGCAGGGCCCG]
consensusID : consensus_9613#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 388 fasta sequence
[CCGCGGACGCGTGGGTCGACACACAAAGGAACGATCGTGTTGCATCCTGTGCAAAAGGTGCATTTCTGTTGTCATCGCAGCCAACGAGCCAGACAAGCGCATACAAAATGTCGCGTACGCTGGAACTGTCGCCCAATGCGCACATCAACAAGTCGCTGCTCGACAAGTACATGGCCTTGCCGATGCCGGACGGTAAGATTCAGGCGACGTACATCTGGATCGATGGCACCGGCGAGAACGTCCGCTGCAAGGACCGCACGCTAGACTTCATCCCCCAGTCGCCGAGTGAGCTCCCGATCTGGAACTACGATGGCAGCTCGACGTACCAGGGGGAGGGTTCGAACTCGGACGTGTACCTGCACCCGGTCGCGATCTATCGCGATCCGTT]
[+] EMBL BM650253 [CCGCGGACGCGTGGGTCGACACACAAAGGAACGATCGTGTTGCATCCTGTGCAAAAGGTGCATTTCTGTTGTCATCGCAGCCAACGAGCCAGACAAGCGCATACAAAATGTCGCGTACGCTGGAACTGTCGCCCAATGCGCACATCAACAAGTCGCTGCTCGACAAGTACATGGCCTTGCCGATGCCGGACGGTAAGATTCAGGCGACGTACATCTGGATCGATGGCACCGGCGAGAACGTCCGCTGCAAGGACCGCACGCTAGACTTCATCCCCCAGTCGCCGAGTGAGCTCCCGATCTGGAACTACGATGGCAGCTCGACGTACCAGGGGGAGGGTTCGAACTCGGACGTGTACCTGCACCCGGTCGCGATCTATCGCGATCCGTT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9613#0 CCGCGTTCGTTCTGCCAGCGAGTGCACGTGTGTGTTTCAAACGTTTTTCCCTTTTACTGT 60
consensus_9613#2 ------------------------------------------------------------
consensus_9613#1 ------------------------------------------------------------
consensus_9613#0 CGTCGATACTGTTCCGGGTTCCGTGTACCGGGGGTGTGTGTGTGTGTTCATGTGTTTGGC 120
consensus_9613#2 -----------------------------------------------------------C 1
consensus_9613#1 ------------------------------------------------------------
consensus_9613#0 GTAGGCCTTGTGATCTATTCGACACACAAAGGAACGATCGTGTTGCATCCTGTGCAAAAG 180
consensus_9613#2 CGCGGACGCGTG----GGTCGACACACAAAGGAACGATCGTGTTGCATCCTGTGCAAAAG 57
consensus_9613#1 -CCGGTCGTGTG---------TTGTACAGTAGCAACTTCTTGAATTATTATTTGAAATTT 50
** * *** *** * * ** ** ** * ** **
consensus_9613#0 GTGCATTTCTGTTGTCATCGCAGCCAACGAGCCAGACAAGCGCATACAAAATGTCGCGTA 240
consensus_9613#2 GTGCATTTCTGTTGTCATCGCAGCCAACGAGCCAGACAAGCGCATACAAAATGTCGCGTA 117
consensus_9613#1 GTAAAAAAAACAGGGCATTTTCTACACTGGTCAAGATGGGTG------GAATGTCGCGTA 104
** * * *** ** * * *** * * ***********
consensus_9613#0 CGCTGGAATTGTCGCCCAATGCTCACATCAACAAGTCGCTGCTCGACAAGTACATGGCCT 300
consensus_9613#2 CGCTGGAACTGTCGCCCAATGCGCACATCAACAAGTCGCTGCTCGACAAGTACATGGCCT 177
consensus_9613#1 CGCTGGAATTGTCGCCCAATGCTCACATCAACAAGTCGCTGCTCGACAAGTACATGGCCT 164
******** ************* *************************************
consensus_9613#0 TGCCGATGCCGGACGGTAAGATTCAGGCGACGTACATCTGGATCGATGGCACCGGCGAGA 360
consensus_9613#2 TGCCGATGCCGGACGGTAAGATTCAGGCGACGTACATCTGGATCGATGGCACCGGCGAGA 237
consensus_9613#1 TGCCGATGCCGGACGGTAAGATTCAGGCGACGTACATCTGGATCGATGGCACCGGCGAGA 224
************************************************************
consensus_9613#0 ACGTCCGCTGCAAGGACCGCACGCTCGACTTCATCCCCCAGTCACCGAGTGAGCTCCCGA 420
consensus_9613#2 ACGTCCGCTGCAAGGACCGCACGCTAGACTTCATCCCCCAGTCGCCGAGTGAGCTCCCGA 297
consensus_9613#1 ACGTCCGCTGCAAGGACCGCACGCTCGACTTCATCCCCCAGTCACCGAGTGAGCTCCCGA 284
************************* ***************** ****************
consensus_9613#0 TCTGGAACTACGATGGCAGCTCGACGTACCAGGCGGAGGGTTCGAACTCGGACGTGTACC 480
consensus_9613#2 TCTGGAACTACGATGGCAGCTCGACGTACCAGGGGGAGGGTTCGAACTCGGACGTGTACC 357
consensus_9613#1 TCTGGAACTACGATGGCAGCTCGACGTACCAGGCGGAGGGTTCGAACTCGGACGTGTACC 344
********************************* **************************
consensus_9613#0 TGCACCCGGTCGCGATCTATCGCGATCCGTTCCGCCGTGGCAACAACATCCTCGTGCTGT 540
consensus_9613#2 TGCACCCGGTCGCGATCTATCGCGATCCGTT----------------------------- 388
consensus_9613#1 TGCACCCGGTCGCGATCTATCGCGATCCGTTCCGCCGTGGCAACAACATCCTCGTGCTGT 404
*******************************
consensus_9613#0 GCGAAACCTACCGCTACGATGGCACACCGACCGAGTCGAACAAGCGCAAGGCGTGCCTGG 600
consensus_9613#2 ------------------------------------------------------------
consensus_9613#1 GCGAAACCTACCGCTACGATGGCACACCGACCGAGTCGAACAAGCGCAAGGCGTGCCTGG 464
consensus_9613#0 AGGTGTGCGAGCGGGCGGCCGAGGAGCAGCCGTGGTTCGGTATCGAGCAGGAGTACACGC 660
consensus_9613#2 ------------------------------------------------------------
consensus_9613#1 AGGTGTGCGAGCGGGCGGCCGAGGAGCAGCCGTGGTTCGGTATCGAGCAGGAGTACACGC 524
consensus_9613#0 TGCTGGATGTGGATGGTCGTCCGCTCGGCTGGCCGAAGAACGGTTTCCCGGGACCGCAGG 720
consensus_9613#2 ------------------------------------------------------------
consensus_9613#1 TGCTGGATGTGGATGGTCGTCCGCTCGGCTGGCCGAAGAACGGTTTCCCCGGACCGCAGG 584
consensus_9613#0 GCCCGTACTATTGCGGCGTCGGTGCGGACAAGGTGTACGCGCGCGACATCGTCGATGCGC 780
consensus_9613#2 ------------------------------------------------------------
consensus_9613#1 GCCCG------------------------------------------------------- 589
consensus_9613#0 ACTATCGGGCCTGTCTGTACGCGGGCGTGAAGATTTGCGGCACGAACGCGGAAGTGATGC 840
consensus_9613#2 ------------------------------------------------------------
consensus_9613#1 ------------------------------------------------------------
consensus_9613#0 CGGCCCAGTGGGAGTACCAGGTGGGCCCGTGCGAGGGCATCCAGATCGGGGATGATCTGT 900
consensus_9613#2 ------------------------------------------------------------
consensus_9613#1 ------------------------------------------------------------
consensus_9613#0 GGATGTCCCGGTTTCTGCTGCACCGCGTGGCGGAGGAGTTTGGTATCGTTGCCACGCTCG 960
consensus_9613#2 ------------------------------------------------------------
consensus_9613#1 ------------------------------------------------------------
consensus_9613#0 ACCCGAAACCGATGCAGGGTGACTGGAACGGGGCCGGTGCGCACACGAACGTTTTCCACA 1020
consensus_9613#2 ------------------------------------------------------------
consensus_9613#1 ------------------------------------------------------------
consensus_9613#0 AGACGATGCGCGAACCGGGCGGCCTGGCGGAGATCGAAAACGCGATCAGCAAGCTGGCGA 1080
consensus_9613#2 ------------------------------------------------------------
consensus_9613#1 ------------------------------------------------------------
consensus_9613#0 AGTGCCACGAGCGTCACATTCGCGCGTACGACCCGAACGGTGGAAAGGACAACGAGCGTC 1140
consensus_9613#2 ------------------------------------------------------------
consensus_9613#1 ------------------------------------------------------------
consensus_9613#0 GCCTGACCGGAAAGCACGAAACTAGCTCGATCCACGATTTTAATGCCGGTGTCGCTAATC 1200
consensus_9613#2 ------------------------------------------------------------
consensus_9613#1 ------------------------------------------------------------
consensus_9613#0 GTGGCTGTTCGATTCGTATTCCGCGTGGCGTTTCCGACCAAGGGTTCGGCTACTTCGAGG 1260
consensus_9613#2 ------------------------------------------------------------
consensus_9613#1 ------------------------------------------------------------
consensus_9613#0 ATCGCCGTCCCAGCTCCAACTGCGATCCGTACAGCGTGGCCGAGGCTATCCTGCGCACGA 1320
consensus_9613#2 ------------------------------------------------------------
consensus_9613#1 ------------------------------------------------------------
consensus_9613#0 TCATCCTCAACGAGTAAGAGACGGACCGACCGGTGTCGTCGTTGTCGTCGTTGTCGTTGG 1380
consensus_9613#2 ------------------------------------------------------------
consensus_9613#1 ------------------------------------------------------------
consensus_9613#0 ACATTCCACAAGCCTTTTGGAGAGTTGTATTTCCATGCTGCACCTTGAGGAAAAAAAGGA 1440
consensus_9613#2 ------------------------------------------------------------
consensus_9613#1 ------------------------------------------------------------
consensus_9613#0 GAGAGGCGAAAGAAAAAAAAGGATGCATTCAGTAGCTACACACCGACACCGATCAGTTGT 1500
consensus_9613#2 ------------------------------------------------------------
consensus_9613#1 ------------------------------------------------------------
consensus_9613#0 ACGATCGGGTTATCTTTTTTTCGCTCTCGTTATTTTATGTTTAATTTGTGTGTGTGTATC 1560
consensus_9613#2 ------------------------------------------------------------
consensus_9613#1 ------------------------------------------------------------
consensus_9613#0 ATGGCTTTGGTTGCCTTTTTCTCCTGCTCCCTC 1593
consensus_9613#2 ---------------------------------
consensus_9613#1 ---------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||