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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9621#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1357 fasta sequence
[CCGCGCCTGAACCATCAACAATTATTCCGTTGACGACACCAGGTTCTGCAACTCCTAAGCCAACGCCTGAGCCATCAACGATCATCCCGCTGACGACGCCAGGTTCTGCAACTCCTAAGCCAACGCCTGAGCCATCAACGATCATCCCGCTGACGACGCCAGGTTCTGCAACTTCTGAGCCAACGCCTGAGCCATCAACAATTATTCCGCTGACGACACCAGGTTCTGCAACTCCTAAGCCAACGCCTGAACCATCAACAATTATTCCGCTGACGACGCCAGGTTCTGCAACTCCTAAGCCAACGCCTGAGCCATCAACGATCATCCCGCTGACGACGCCAGGCTCTACAACTCCTAAGCCAACGCCTGAGCCATCAACGATCATCCCGCTGACGACGCCAGGCTCTGCAACTTCTGAAGTGACGCCCGAACTTACAACAAACATTCCCCTTACTACACCAGGTACGGCGTCATCCTCCACTGTTGAGTTAACACCTGAGCCAACAACAAACATTCCGCTAACAACGCCAGGCCCAAGCTCGACTTCAACAACTCCTGAGGCCACAACGAACATCCCGCTGACGACACCAGGCACTGGAACTGCCTCAACCACCAACTTGCCACAAACAACGCCCGGTGAAGGCCCATCTCCGACAACTCCTGCACCAACTGCCGCGCCAACGACTGCCATCCCGTTGACCACGCCCGGTGCAGTCACGCCAACTACACCGTCCGTGCCGGTACCGACCACAACAGCAACGCCTGAGCCACGGACGGACCTCCCGCTGACTACGACGCCGGGTCTGGAACCGTCCTCAACGACGACTGATGCCGCCACCGCCACGACCACCGACAGTGTGGACGGGACGGATA-CGACCGACCGATCCGACGC-TACCGACGGCGCAACGAACACATTG-CCCA-CCA-CCACCACCACC-ACGTCCGGCGCGTTCCAGTGCCCGAACGAGGGCC-GCTTT-CCGAG-CCCGGACGCTACCGGCT-GCGAATCGTA-CGTGCTGTGCGTGCGCAACAGCCTCGGTACGCTGACGCCGCTCCAGTTCACCTGCCCGCCGACCACCATCTTTTCGCCGACCCGCGCCATGTGCGTGACGGCGGCCCTGCACACGTGCGGCCAGGAGACGACCAGCGTCGCGCCACCGGCCACGACGACGACGACGACAACCACCACTACGACCCCTGCGCCTACGACGACCACGCTCGGGCTGGAGGGTGCGTGCAGGACGGCCGGCAAGTTCCCGACCGGGGTCGACTGCCGCTCGTACCAGTTCTGCGTCCAGCTGCCGTCCGGCGAGCTGGTCGAGTTTATCTTCCAGTGCCCGGGCACCACGCAGTACGACGAGCA]
[+] EMBL BM597561 [CCGCGCCTGAACCATCAACAATTATTCCGTTGACGACACCAGGTTCTGCAACTCCTAAGCCAACGCCTGAGCCATCAACGATCATCCCGCTGACGACGCCAGGTTCTGCAACTCCTAAGCCAACGCCTGAGCCATCAACGATCATCCCGCTGACGACGCCAGGTTCTGCAACTTCTGAGCCAACGCCTGAGCCATCAACAATTATTCCGCTGACGACACCAGGTTCTGCAACTCCTAAGCCAACGCCTGAACCATCAACAATTATTCCGCTGACGACGCCAGGTTCTGCAACTCCTAAGCCAACGCCTGAGCCATCAACGATCATCCCGCTGACGACGCCAGGCTCTACAACTCCTAAGCCAACGCCTGAGCCATCAACGATCATCCCGCTGACGACGCCAGGCTCTGCAACTTCTGAAGTGACGCCCGAACTTACAACAAACATTCCCCTTACTACACCAGGTACGGCGTCATCCTCCACTGTTGAGTTAACACCTGAGCCAACAACAAACATTCCGCTAACAACGCCAGGCCCAAGCTCGACTTCAACAACTCCTGAGGCCACAACGAACATCCCGCTGACGACACCAGGCACTGGAACTGCCTCAACCACCAACTTGCCACAAACAAC ]
[+] EMBL BM594554 [ ccgTGCAACTCCTAAGCCAACGCCTGAACCATCAACAATTATTCCGCTGACGACGCCAGGTTCTGCAACTCCTAAGCCAACGCCTGAGCCATCAACGATCATCCCGCTGACGACGCCAGGCTCTACAACTCCTAAGCCAACGCCTGAGCCATCAACGATCATCCCGCTGACGACGCCAGGCTCTGCAACTTCTGAAGTGACGCCCGAACTTACAACAAACATTCCCCTTACTACACCAGGTACGGCGTCATCCTCCACTGTTGAGTTAACACCTGAGCCAACAACAAACATTCCGCTAACAACGCCAGGCCCAAGCTCGACTTCAACAACTCCTGAGGCCACAACGAACATCCCGCTGACGACACCAGGCACTGGAACTGCCTCAACCACCAACTTGCCACAAACAACGCCCGGTGAAGGCCCATCTCCGACAACTCCTGCACCAACTGCCGCGCCAACGACTGCCATCC ]
[+] EMBL BX606274 [ TTCCGCTAACAACGCCAGGCCCAAGCTCTACTTCAACAACTCCGGAGGCCACAACGAACATCCCGCTGACGACACCAGGCACTGGAACTGCCTCAACCACCAACTTGCCACAAACAACGCCCGGTGAAGGCCCATCTCCGACAACTCCTGCACCAACTGCCGCGCCAACGACTGCCATCCCGTTGACCACGCCCGGTGCAGTCACGCCAACTACACCGTCCGTGCCGGTACCGACCACAACAGCAACGCCTGAGCCACGGACGGACCTCCCGCTGACTACGACGCCGGGTCTGGAACCGTCCTCAACGACGACTGATGCCGCCACCGCCACGACCACCGACAGTGTGGACGGGACGGATA CGACCGACCGATCCGACGC TACCGACGGCGCAACGAACACATTG CCCA CCA CCACCACCACC ACGTCCGGCGCGTTCCAGTGCCCGAACGAGGGCC GCTTT CCGAG CCCGGACGCTACCGGCT GCGAATCGTA CGTGCTGTGCGTGCGCAACAGCCTCGGTACGCTGACGCCGCTCCAGTTCACCTGCCCGCCGACCACCATCTTTTCGCCGACCCGCGCCATGTGCGTGACGGCGGCCCTGCACACGTGCGGCCAGGAGACGACCAGCGTCGCGCCACCGGCCACGACGACGACGACGACAACCACCACTACGACCCCTGCGCCTACGACGACCACGCTCGGGCTGGAGGGTGCGTGCAGGACGGCCGGCAAGTTCCCGACCGGGGTCGACTGCCGCTCGTACCAGTTCTGCGTCCAGCTGCCGTCCGGCGAGCTGGTCGAGTTTATCTTCCAGTGCCCGGGCACCACGCAGTACGACGAGCA]
[+] EMBL BX619887 [ CAACGCCAGGCCCAAGCTCGACTTCAACAACTCCTGAGGCCACAACGAACATCCCGCTGACGACACCAGGCACTGGAACTGCCTCAACCACCAACTTGCCACAAACAACGCCCGGTGAAGGCCCATCTCCGACAACTCCTGCACCAACTGCCGCGCCAACGACTGCCATCCCGTTGACCACGCCGGGTGCAGTCACGCCAACTACACCGTCCGTGCCGGTACCGACCACAACAGCAACGCCTGAGCCGCGGACGGACCTCCCGCTGACTACGACGCCGGGTCTGGAACCGTCCTCAACGACGACTGATGCCGCCACCGCCACGACCACCGACAGTGTGGACGGGACGGATACCGACCGACCGATCCGACGCNTACCGACGGCGCAACGAACACATTGCCCCACCCACCCACCACCACCNACGTCCGGCGCGTTCCAGTGCCCGNNCGAGGGCCGGCTTTCCCGAGCCCCGGACGCCATCNGCTGGCGAATCGTACCGTGCTGTGCGTGCGCCACAGCCTCGGCACGCTGACGCCGCTCCCGT ]
consensusID : consensus_9621#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 902 fasta sequence
[CCGCCAACTGCCGCGCCAACGACTGCCATCCCGTTGACCACGCCGGGAGCAGTCACGCCAACTACACCGACGCGTGCCGGTACCGACCACAACAGCAACGCCTGAGCCGCGGACGGACCTCCCGCTGACTACGACGCCGGGTCTGGAACCGTCCTCAACGACGACTGATGCCGCCACCGCCACGACCACCGACAGTGTGGACGGGACGGATACGACCGACCGATCCGACGCTACCGACGGCGCAACGAACACATTGCCCACCACCACCACCACCACGTCCGGCGCGTTCCAGTGCCCGAACGAGGGCCGCTTTCCGAGCCCGGACGCTACCGGCTGCGAATCGTACGTGCTGTGCGTGCGCAACAGCCTCGGCACGCTGACGCCGCTCCAGTTCACCTGCCCGCCGACCACCATCTTTTCGCCGACCCGCGCCATGTGCGTGACGGCGGCCCTGCACACGTGCGGCCAGGAGACGACCAGCGTCGCGCCACCGGCCACGACGACCACGACCGTACCGCCGCCGCCACCACCGACGCCCACCCCGTTCCAGTGTCCGGACGTGGGCCGCTTCCCGAACCCCGACTCGCTCTACTGCAAGTCCTACTACCTCTGCCTGTACAGCCTGGCCGACGGCAACACGAATCTGATCAGTGTGGAGCTGAGCTGCCCCACTGGCGCCATTTTTGCCACGGACGCGAGCCGCTGCGTCAAGGAGGAGGGTTACCGGTGTGGGGTGGGCGGCGGCGCTACCACTGCCGGTCCGGAGACGACCACGACGGCGGCGGCGACGACGACGACGACGACGACAACCACCACCACCACCACTACGACCCCTGCGCCTACGACGACCACGCTCGGGCTGGAGGGTGCGTGCCGGACGGCCGGCAAGTTCCCGACCGGGG]
[+] EMBL BM592387 [CCGCCAACTGCCGCGCCAACGACTGCCATCCCGTTGACCACGCCGGGAGCAGTCACGCCAACTACACCGTC CGTGTCGGTACCGACCACAACAGCAACGCCTGAGCCGCGGACGGACCTCCCGCTGACTACGACGCCGGGTCTGGAACCGTCCTCAACGACGACTGATGCCGCCACCGCCACGACCACCGACAGTGTGGACGGGACGGATACGACCGACCGATCCGACGCTACCGACGGCGCAACGAACACATTGCCCACCACCACCACCACCACGTCCGGCGCGTTCCAGTGCCCGAACGAGGGCCGCTTTCCGAGCCCGGACGCTACCGGCTGCGAATCGTACGTGCTGTGCGTGCGCAACAGCCTCGGCACGCTGACGCCGCTCCAGTTCACCTGCCCGCCGACCACCATCTTTTCGCCGACCCGCGCCATGTGCGTGACGGCGGCCCTGCACACGTGCGGCCAGGAGACGACCAGCGTCGCGCCACCGGCCACGACGACCACGACCGTACCGCCGCCGCCACCACCGACGCCCACCCCGTTCCAGTGTCCGGACGTGGGCCGCTTCCCGAACCCCGACTCGCTCTACTGCAAGTCCTACTACCTCTGCCTGTACAGCCTGGCCGACGGCAACACGAATCTGA ]
[+] EMBL BM617372 [ ccgCCCACGCGTCCGGGTACCGACCACAACAGCAACGCCTGAGCCGCGGACGGACCTCCCGCTGACTACGACGCCGGGTCTGGAACCGTCCTCAACGACGACTGATGCCGCCACCGCCACGACCACCGACAGTGTGGACGGGACGGATACGACCGACCGATCCGACGCTACCGACGGCGCAACGAACACATTGCCCACCACCACCACCACCACGTCCGGCGCGTTCCAGTGCCCGAACGAGGGCCGCTTTCCGAGCCCGGACGCTACCGGCTGCGAATCGTACGTGCTGTGCGTGCGCAACAGCCTCGGCACGCTGACGCCGCTCCAGTTCACCTGCCCGCCGACCACCATCTTTTCGCCGACCCGCGCCATGTGCGTGACGGCGGCCCTGCACACGTGCGGCCAGGAGACGACCAGCGTCGCGCCACCGGCCACGACGACCACGACCGTACCGCCGCCGCCACCACCGACGCCCACCCCGTTCCAGTGTCCGGACGTGGGCCGCTTCCCGAACCCCGACTCGCTCTACTGCAAGTCCTACTACCTCTGCCTGTACAGCCTGGCCGACGGCAACACGAATCTGATCAGTGTGGAGCTGAGCTGCCCCACTGGCGCCAT ]
[+] EMBL BM638320 [ cCGCGTGCCGGTACCGACCACAACAGCAACGCCTGAGCCGCGGACGGACCTCCCGCTGACTACGACGCCGGGTCTGGAACCGTCCTCAACGACGACTGATGCCGCCACCGCCACGACCACCGACAGTGTGGACGGGACGGATACGACCGACCGATCCGACGCTACCGACGGCGCAACGAACACATTGCCCACCACCACCACCACCACGTCCGGCGCGTTCCAGTGCCCGAACGAGGGCCGCTTTCCGAGCCCGGACGCCATCGGCTGCGAATCGTACGTGCTGTGCGTGCGCAACAGCCTCGGCACGCTGACGCCGCTCCAGTTCACCTGCCCGCCGACCACCATCTTTTCGCCGACCCGCGCCATGTGCGTGACGGCGGCCCTGCACACGTGCGGCCAGGAGACGACCAGCGTCGCGCCACCGGCCACGACGACCACGACCGTACCGCCGCCGCCACCACCGACGCCCACCCCGTTCCAGTGTCCGGACGTGGGCCGCTTTCCGAATCCCGA ]
[+] EMBL BM626506 [ ccgGTGACGGCGGCCCTGCACACGTGCGGCCAGGAGACGACCAGCGTCGCGCCACCGGCCACGACGACCACGACCGTACCGCCGCCGCCACCACCGACGCCCACCCCGTTCCAGTGTCCGGACGTGGGCCGCTTTCCGAATCCCGACTCGCTCTACTGCAAATCCTACTACCTCTGCCTGTACAGCCTGGCCGACGGCAACACGAATCTGATCAGTGTGGAGCTGAGCTGCCCCACTGGCGCCATTTTTGCCACGGACGCGAGCCGCTGCGTCAAGGAGGAGGGTTACCGGTGTGGGGTGGGCGGCGGCGCTACCACTGCCGGTCCGGAGACGACCACGACGGCGGCGGCGACGACGACGACGACGACGACAACCACCACCACCACCACTACGACCCCTGCGCCTACGACGACCACGCTCGGGCTGGAGGGTGCGTGCCGGACGGCCGGCAAGTTCCCGACCGGGG]
consensusID : consensus_9621#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 721 fasta sequence
[CCGCCGCGAACAGACAACCGATACGCACAGGTTCCGCGGCAGGAAGGCGGTTTTCGATTTTGAAGTGAGCTAGCGTGTGTGTGTGTGTGTGAGTGCCAAGTGAGAGAGGGCGGAAAGAAGAAATAAAAAA--AATAATAGACAGAACGATGCGTCATTCGCTGATGCCGACAGTGATTGGGACAATTTTGCTGGTGGTGGCGCCGCTGCTAGCCCACACGCAGGAGCTGGCGGCAGTGAGTGGTGCAGCAGTGCGGTGCGAAACGGTCGGCTCGCTTCCGGCCGACGAGACGGACCGGTGCAGTGGCGCGTACTATCGCTGTGAGCTGCGGCCAACGGACAGCGTGCCGGTTCCGGTCGCTGCGCAATGTTCCGTCGGACGCGTGTACTCGCGCGAAGCGCGCCAGTGCGTGGACGCGGCGACGGTCGGGTGTAGCGGCATTGCGTTTGCCGGCCCGCGTGACGTCGGCTTCCAGTGTACGTCCAGCGGTAGGTTTCCCGATCTGGACGCGCCCGACTGCAAGGCGTACTTTCTGTGCACGAAG-AACACGGACGGTTCGCTGATACCGGCCCGGGTGACCTGCCCCGGGGACGACCATCTTTTCGCCGGAAAAGATGTCGTGCGTTTCGTCGCCGCCCAATGTGTGCCCGC-AGGCATCGACGGCGGCGCCGCCACCGAGCACAGCCGTCACGCCCGGACCGTTCGTGTGTCCCCGGCAAGGGC]
[+] EMBL BM657789 [CCGGCGCGAACAGACAACCGATACGCACAGGTTCCGCGGCAGGAAGGCGGTTTTCGATTTTGAAGTGAGCTAGCGTGTGTGTGTGTGTGTGAGTGCCAAGTGAGAGAGGGCGGAAAGAAGAAATAAAAAA AATAATAGACAGAACGATGCGTCATTCGCTGATGCCGACAGTGATTGGGACAATTTTGCTGGTGGTGGCGCCGCTGCTAGCCCACACGCAGGAGCTGGCGGCAGTGAGTGGTGCAGCAGTGCGGTGCGAAACGGTCGGCTCGCTTCCGGCCGACGAGACGGACCGGTGCAGTGGCGCGTACTATCGCTGTGAGCTGCGGCCAACGGACAGCGTGCCGGTTCCGGTCGCTGCGCAATGTTCCGTCGGACGCGTGTACTCGCGCGAAGCGCGCCAGTGCGTGGACGCGGCGACGGTCGGGTGTAGCGGCATTGCGTTTGCCGGCCCGCGTGACGTCGGCTTCCAGTGTACGTCCAGCGGTAGGTTTCCCGATCTGGACGCGCCCGACTGCAAGGCGTACTTTCTGTGCACGAAG AACACGGACGGTTCGCTGATACCGGCCCGGGTGACCTGCCCCGGGGACGACCATCTTTTCGCCGGAAAAGATGTCGTGCGTTTCGTCGCCGCCCAATGTGTGCCCGC AGGCATCGACGGCGGCGCCGCCACCGAGCACAGCCGTCACGCCCGGACCGTTCGTGTGTCCCCGGCAAGGGC]
[+] EMBL BM600748 [ CCGCGAACAGACAACCGATACGCACAGGTTCCGCGGCAGGAAGGCGGTTTTCGATTTTGAAGTGAGCTAGCGTGTGTGTGTGTGTGTGAGTGCCAAGTGAGAGAGGGCGGAAAGAAGAAATAAAAAA AATAATAGACAGAACGATGCGTCATTCGCTGATGCCGACAGTGATTGGGACAATTTTGCTGGTGGTGGCGCCGCTGCTAGCCCACACGCAGGAGCTGGCGGCAGTGAGTGGTGCAGCAGTGCGGTGCGAAACGGTCGGCTCGCTTCCGGCCGACGAGACGGACCGGTGCAGTGGCGCGTACTATCGCTGTGAGCTGCGGCCAACGGACAGCGTGCCGGTTCCGGTCGCTGCGCAATGTTCCGTCGGACGCGTGTACTCGCGCGAAGCGCGCCAGTGCGTGGACGCGGCGACGGTCGGGTGTAGCGGCATTGCGTTTGCCGGCCCGCGTGACGTCGGCTTCCAGTGTACGTCCAGCGGTAGGTTTCCCGATCTGGACGCGCCCGACTGCAAGGCGTACTTTCTGTGCACGAAG AACACGGACGGTTCGCTGATACCGGCCCGGGTGACCTG CCCGGGGACGACCATCTTTTCGCCGGAAAAGATGTCGTGCGTTTCGTCGCCGCCCAATGTGTGCCCGCAAGGCA ]
[+] EMBL BM609940 [ ccgGCGAACAGACAACCGATACGCACAGGTTCCGCGGCAGGAAGGCGGTTTTCGATTTTGAAGTGAGCTAGCGTGTGTGTGTGTGTGTGAGTGCCAAGTGAGAGAGGGCGGAAAGAAGAAATAAAAAA AATAATAGACAGAACGATGCGTCATTCGCTGATGCCGACAGTGATTGGGACAATTTTGCTGGTGGTGGCGCCGCTGCTAGCCCACACGCAGGAGCTGGCGGCAGTGAGTGGTGCAGCAGTGCGGTGCGAAACGGTCGGCTCGCTTCCGGCCGACGAGACGGACCGGTGCAGTGGCGCGTACTATCGCTGTGAGCTGCGGCCAACGGACAGCGTGCCGGTTCCGGTCGCTGCGCAATGTTCCGTCGGACGCGTGTACTCGCGCGAAGCGCGCCAGTGCGTGGACGCGGCGACGGTCGGGTGTAGCGGCATTGCGTTTGCCGGCCCGCGTGACGTCGGCTTCCAGTGTACGTCCAGCGGTAGGTTTCCCGATCTGGACGCGCCCGACTGCAAGGCGTACT ]
[+] EMBL BM588953 [ ccgCAGACAACCGATACGCACAGGTTCCGCGGCAGGAAGGCGGTTTTCGATTTTGAAGTGAGCTAGCGTGTGTGTGTGTGTGTGAGTGCCAAGTGAGAGAGGGCGGAAAGAAGAAATAAAAAA AATAATAGACAGAACGATGCGTCATTCGCTGATGCCGACAGTGATTGGGACAATTTTGCTGGTGGTGGCGCCGCTGCTAGCCCACACGCAGGAGCTGGCGGCAGTGAGTGGTGCAGCAGTGCGGTGCGAAACGGTCGGCTCGCTTCCGGCCGACGAGACGGACCGGTGCAGTGGCGCGTACTATCGCTGTGAGCTGCGGCCAACGGACAGCGTGCCGGTTCCGGTCGCTGCGCAATGTTCCGTCGGACGCGTGTACTCGCGCGAAGCGCGCCAGTGCGTGGACGCGGCGACGGTCGGGTGTAGCGGCATTGCGTTTGCCGGCCCGCGTGACGTCGGCTTCCAGTGTACGTCCAGCGGTAGGTTTCCCGATCTGGACGCGCCCGACTGCAAGGCGTACTTTCTGTGCACGAAG AACACGGACGGTTCGCTGATACCGGCCCGGGTGACCTG CCCGGGGACGACCATCTTTTCGCCGGAAAAGATGTCGTGCGTTTCGTCGCCGCCCAATGTGTGCCCGC AGGC ]
[+] EMBL BM616514 [ ccgAACCGATACGCACAGGTTCCGCGGCAGGAAGGCGGTTTTCGATTTTGAAGTGAGCTAGCGTGTGTGTGTGTGTGTGAGTGCCAAGTGAGAGAGGGCGGAAAGAAGAAATAAAAAA AATAATAGACAGAACGATGCGTCATTCGCTGATGCCGACAGTGATTGGGACAATTTTGCTGGTGGTGGCGCCGCTGCTAGCCCACACGCAGGAGCTGGCGGCAGTGAGTGGTGCAGCAGTGCGGTGCGAAACGGTCGGCTCGCTTCCGGCCGACGAGACGGACCGGTGCAGTGGCGCGTACTATCGCTGTGAGCTGCGGCCAACGGACAGCGTGCCGGTTCCGGTCGCTGCGCAATGTTCCGTCGGACGCGTGTACTCGCGCGAAGCGCGCCAGTGCGTGGACGCGGCGACGGTCGGGTGTAGCGGCATTGCGTTTGCCGGCCCGCGTGACGTCGGCTTCCAGTGTACGTCCAGCGGTAGGTTTCCCGATCTGGACGCGCCCGACTGCAAGGCGTACTTTCTGTGCACGAAGAAACACGGACGGTTCGCTGATACCGGCCCGGGTGACCTGGCCCGGGGACGACCATCTTTTCGCCGGAAAAGATGTCGTGCGTTTCGTCGCCGCCCAATGTGTGCCCGCAAGGCATCGACGGCGG ]
[+] EMBL BM575591 [ ccgCCGATACGCACAGGTTCCGCGGCAGGAAGGCGGTTTTCGATTTTGAAGTGAGCTAGCGTGTGTGTGTGTGTGTGAGTGCCAAGTGAGAGAGGGCGGAAAGAAGAAATAAAAAAATAATAATAGACAGAACGATGCGTCATTCGCTGATGCCGACAGTGATTGGGACAATTTTGCTGGTGGTGGCGCCGCTGCTAGCCCACACGCAGGAGCTGGCGGCAGTGAGTGGTGCAGCAGTGCGGTGCGAAACGGTCGGCTCGCTTCCGGCCGACGAGACGGACCGGTGCAGTGGCGCCTACTATCGCTGTGAGCTGCGGCCAACGGACAGCGTGCCGGTTCCGGTCGCTGCGCAATGTTCCGTCGGACGCGTGTACTCGCGCGAAGCGCGCCAGTGCGTGGACGCGGCGACGGTCGGGTGTAGCGGCATTGCGTTTGCCGGCCCGCGTGACGTCGGCTTCCAGTGTACGTCCAGCGGTAGGTTTCCCGATCTGGACGCGCCCGACTGCAAGGCGTACTTTCTGTGCACGAAG AACACGGACGGTTCGCTGATACCGGCCCGGGTGACCTGCCCC GGGACGACCATCTTTTCGCCGGAAAAGATGTCGTGCGTTTCGTCGCCGCCC ]
[+] EMBL BX610064 [ GTGATTGGGTCAATTTTGCTGGTGGTGGCGCCGCTGCTAGCCCACACGCAGGAGCTGGCGGCAGTGAGTGGTGCAGCAGTGCGGTGCGAAACGGTCGGCTCGCTTCCGGCCGACGAGACGGACCGGTGCAGTGGCGCCTACTATCGCTGTGAGCTGCGGCCAACGGACAGCGTGCCGGTTCCGGTCGCTGCGCAATGTTCCGTCGGACGCGTGTACTCGCGCGAAGCGCGCCAGTGCG ]
consensusID : consensus_9621#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 657 fasta sequence
[CCGCGCGAACAGACAACCGATACGCACAGGTTCCGCGGCAGGAAGGCGGTTTTCGATTTTGAAGTGAGCTAGCGTGTGTGTGTGTGTGTGAGTGCCAAGTGAGAGAGGGCGGAAAGAAGAAATAAAAAAATAATAATAGACAGAACGATGCGTCATTCGCTGATGCCGACGACGACTTCAACGACGTCGCAATCAACGCCTGAGCCATCAACGAATATCCCGCTGACGACGCCAGGTTCTGCAACTCCTGAGCCAACGCCCGAACTTTCAACGAATATCCCGCTGACGACGCCAGGTTCTGCAACTCCTGAGCCAACGCCTGAACCATCAACAATTATTCCGTTGACGACACCAGGTTCTGCAACTCCTAAGCCAACGCCTGAGCCATCAACGATCATCCCGCTGACGACGCCAGGTTCTGCAACTCCTAAGCCAACGCCTGAGCCATCAACGATCATCCCGCTGACGACGCCAGGTTCTGCAACTTCTGAGCCAACGCCTGAGCCATCAACAATTATTCCGCTGACGACACCAGGTTCTGCAACTCCTAAGCCAACGCCTGAACCATCAACAATTATTCCGCTGACGACGCCAGGTTCTGCAACTCCTAAGCCAACGCCTGAGCCATCAACGATCAT-CCCGCTGACGACGCCAGGC]
[+] EMBL BM651795 [CCGCGCGAACAGACAACCGATACGCACAGGTTCCGCGGCAGGAAGGCGGTTTTCGATTTTGAAGTGAGCTAGCGTGTGTGTGTGTGTGTGAGTGCCAAGTGAGAGAGGGCGGAAAGAAGAAATAAAAAAATAATAATAGACAGAACGATGCGTCATTCGCTGATGCCGACGACGACTTCAACGACGTCGCAATCAACGCCTGAGCCATCAACGAATATCCCGCTGACGACGCCAGGTTCTGCAACTCCTGAGCCAACGCCCGAACTTTCAACGAATATCCCGCTGACGACGCCAGGTTCTGCAACTCCTGAGCCAACGCCTGAACCATCAACAATTATTCCGTTGACGACACCAGGTTCTGCAACTCCTAAGCCAACGCCTGAGCCATCAACGATCATCCCGCTGACGACGCCAGGTTCTGCAACTCCTAAGCCAACGCCTGAGCCATCAACGATCATCCCGCTGACGACGCCAGGTTCTGCAACTTCTGAGCCAACGCCTGAGCCATCAACAATTATTCCGCTGACGACACCAGGTTCTGCAACTCCTAAGCCAACGCCTGAACCATCAACAATTATTCCGCTGACGACGCCAGGTTCTGCAACTCCTAAGCCAACGCCTGAGCCATCAACGATCAT CCCGCTGACGACGCCAGGC]
[+] EMBL BM651793 [CCGCGCGAACAGACAACCGATACGCACAGGTTCCGCGGCAGGAAGGCGGTTTTCGATTTTGAAGTGAGCTAGCGTGTGTGTGTGTGTGTGAGTGCCAAGTGAGAGAGGGCGGAAAGAAGAAATAAAAAAATAATAATAGACAGAACGATGCGTCATTCGCTGATGCCGACGACGACTTCAACGACGTCGCAATCAACGCCTGAGCCATCAACGAATATCCCGCTGACGACGCCAGGTTCTGCAACTCCTGAGCCAACGCCCGAACTTTCAACGAATATCCCGCTGACGACGCCAGGTTCTGCAACTCCTGAGCCAACGCCTGAACCATCAACAATTATTCCGTTGACGACACCAGGTTCTGCAACTCCTAAGCCAACGCCTGAGCCATCAACGATCATCCCGCTGACGACGCCAGGTTCTGCAACTCCTAAGCCAACGCCTGAGCCATCAACGATCATCCCGCTGACGACGCCAGGTTCTGCAACTTCTGAGCCAACGCCTGAGCCATCAACAATTATTCCGCTGACGACACCAGGTTCTGCAACTCCTAAGCCAACGCCTGAACCATCAACAATTATTCCGCTGACGACGCCAGGTTCTGCAACTCCTAAGCCAACGCCTGAGCCATCAACGATCATCCCCGCT ]
consensusID : consensus_9621#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 273 fasta sequence
[CCCCACTGGCGCCATCAGGGCCACGGACGCGAGCCGCTGCGTCAAGGAGGAGGGTCACCGGTGTGGGGGGGGCGGCGGCGCTACCACGGCCGGTCCGGAGACGACCACGACGGCGGCGACGACGACGACGACGACGACAACCACCACTACGACCCCGGCGCCTACGACGACCACGCTCGGGCTGGAGGGTGCGTGCCGGACGGCCGGCAAGTACCCGACCGGGGTCGACGGCCGCTCGTACCAGTACCGCGTCCAGCTGCCGTCCGGCGAGCT]
[+] EMBL BX612896 [CCCCACTGGCGCCATCAGGGCCACGGACGCGAGCCGCTGCGTCAAGGAGGAGGGTCACCGGTGTGGGGGGGGCGGCGGCGCTACCACGGCCGGTCCGGAGACGACCACGACGGCGGCGACGACGACGACGACGACGACAACCACCACTACGACCCCGGCGCCTACGACGACCACGCTCGGGCTGGAGGGTGCGTGCCGGACGGCCGGCAAGTACCCGACCGGGGTCGACGGCCGCTCGTACCAGTACCGCGTCCAGCTGCCGTCCGGCGAGCT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9621#1 ------------------------------------------------------------
consensus_9621#4 ------------------------------------------------------------
consensus_9621#0 CCGCGCCTGAACCATCAACAATTATTCCGTTGACGACACCAGGTTCTGCAACTCCTAAGC 60
consensus_9621#3 ------------------------------------------------------------
consensus_9621#2 ------------------------------------------------------------
consensus_9621#1 ------------------------------------------------------------
consensus_9621#4 ------------------------------------------------------------
consensus_9621#0 CAACGCCTGAGCCATCAACGATCATCCCGCTGACGACGCCAGGTTCTGCAACTCCTAAGC 120
consensus_9621#3 ------------------------------------------------------------
consensus_9621#2 ------------------------------------------------------------
consensus_9621#1 ------------------------------------------------------------
consensus_9621#4 ------------------------------------------------------------
consensus_9621#0 CAACGCCTGAGCCATCAACGATCATCCCGCTGACGACGCCAGGTTCTGCAACTTCTGAGC 180
consensus_9621#3 ------------------------------------------------------------
consensus_9621#2 ------------------------------------------------------------
consensus_9621#1 ------------------------------------------------------------
consensus_9621#4 ------------------------------------------------------------
consensus_9621#0 CAACGCCTGAGCCATCAACAATTATTCCGCTGACGACACCAGGTTCTGCAACTCCTAAGC 240
consensus_9621#3 ------------------------------------------------------------
consensus_9621#2 ------------------------------------------------------------
consensus_9621#1 ------------------------------------------------------------
consensus_9621#4 ------------------------------------------------------------
consensus_9621#0 CAACGCCTGAACCATCAACAATTATTCCGCTGACGACGCCAGGTTCTGCAACTCCTAAGC 300
consensus_9621#3 ------------------------------------------------------------
consensus_9621#2 ------------------------------------------------------------
consensus_9621#1 --------------------------------------------------------CCGC 4
consensus_9621#4 ------------------------------------------------------------
consensus_9621#0 CAACGCCTGAGCCATCAACGATCATCCCGCTGACGACGCCAGGCTCTACAACTCCTAAGC 360
consensus_9621#3 ------------------------------------------------------------
consensus_9621#2 ------------------------------------------------------------
consensus_9621#1 CAACTGCCGCGCCAACGACTGCCATCCCGTTGACCACGCCGGGAGCAGTCACGCCAACTA 64
consensus_9621#4 ------------------------------------------------------------
consensus_9621#0 CAACGCCTGAGCCATCAACGATCATCCCGCTGACGACGCCAGGCTCTGCAACTTC---TG 417
consensus_9621#3 ------------------------------------------------------------
consensus_9621#2 ------------------------------------------------------------
consensus_9621#1 CACCGACGCGTGCCGGTACCGACCACAACAGCAACGCCTGAGCCGCGGACGGACCTCCCG 124
consensus_9621#4 ------------------------------------------------------------
consensus_9621#0 AAGTGACGCCCGAACTTAC-AACAAACATTCCCCTTACTACACCAGGTACGGCGTCATCC 476
consensus_9621#3 ------------------------------------------------------------
consensus_9621#2 ------------------------------------------------------------
consensus_9621#1 CTGACTACGACGCCGGGTCTGGAACCGTCCTCAACGACGACTGATGCCGCCACCGCCACG 184
consensus_9621#4 ------------------------------------------------------------
consensus_9621#0 TCCACTGTTGAGTTAACACCTGAGCCAACAACAAACATTCCGCTAACAACGCCAGGCCCA 536
consensus_9621#3 ------------------------------------------------------------
consensus_9621#2 ------------------------------------------------------------
consensus_9621#1 ACCACCGACAGTGTGGACGGGACGGATACGACCGACCGATCCGACGCTACCGACGGCGCA 244
consensus_9621#4 ------------------------------------------------------------
consensus_9621#0 AGCTCGACTTCAACAACTCCTGAGGCCACAACGAACATCCCGCTGACGACACCAGGCACT 596
consensus_9621#3 ------------------------------------------------------------
consensus_9621#2 ------------------------------------------------------------
consensus_9621#1 ACGAACACATTGCCCACCACCACCACCACCACGTCCGGCGCGTTCCAGTGCCCGAACGAG 304
consensus_9621#4 ------------------------------------------------------------
consensus_9621#0 GGAACTGCCTCAACCACCAAC-TTGCCACAAACAACGCCCGGTGAAGGCCCATCTCCGAC 655
consensus_9621#3 ---------------------------------CCGCGCGAACAGACAACCGATACGCAC 27
consensus_9621#2 --------------------------------CCGCCGCGAACAGACAACCGATACGCAC 28
consensus_9621#1 GGCCGCTTTCCGAGCCCGGACGCTACCGGCTGCGAATCGTACGTGCTGTGCGTGCGCAAC 364
consensus_9621#4 ------------------------------------------------------------
consensus_9621#0 AACTCCTGCACCAACTGCCGCGCCAACGACTGCCATCCCGTTGACCACGCCCGGTGCAGT 715
consensus_9621#3 AGGTTCCGCGGCAGGAAGGCGGTTTTCGATTTTGAAGTGAGCTAGC-GTGTGTGTGTGTG 86
consensus_9621#2 AGGTTCCGCGGCAGGAAGGCGGTTTTCGATTTTGAAGTGAGCTAGC-GTGTGTGTGTGTG 87
consensus_9621#1 AGCCTCGGC-ACGCTGACGCCGCTCCAGTTCACCTGCCCGCCGACCACCATCTTTTCGCC 423
consensus_9621#4 ------------------------------------------------------------
consensus_9621#0 CACGCCAACTACACCGTCCGTGCCGGTACCGACCACAACAGCAACGCCTGAGCCACGGAC 775
consensus_9621#3 TGTGAGTGCCAAGTGAGAGAGGGCGGAAAGAAGAAATAAAAAAATAATAATAGACAGAAC 146
consensus_9621#2 TGTGAGTGCCAAGTGAGAGAGGGCGGAAAGAAGAAATAAAAAAA--ATAATAGACAGAAC 145
consensus_9621#1 GACCCGCGCCATGTGCGTGACGGCGGCCCTGCACACGTGCGGCCAGGAGACGACCAGCGT 483
consensus_9621#4 ------------------------------------------------------------
consensus_9621#0 GGACCTCCCGCTGACTACGACGCCGGGTCTGGAACCGTCCTCAACGACGACTGATGCCGC 835
consensus_9621#3 GATGCGTCATTCGCTGATGCCGACGACGACTTCAACGACGTCGCAATCAACGCCTGAGCC 206
consensus_9621#2 GATGCGTCATTCGCTGATGCCGACAGTGATTGGGACAATTTTGCTGGTGGTGGCGCCGCT 205
consensus_9621#1 CGCGCCACCGGCCACGACGACCACGACCGTACCG----CCGCCGCCACCACCGACGCCCA 539
consensus_9621#4 ------------------------------------------------------------
consensus_9621#0 CACCGCCACGACCACCGACAGTGTGGACGGGACGGATACGACCGACCGATCCGACGCTAC 895
consensus_9621#3 ATCAACGAATATCCCGCTGACGACGCCAGGTTCT----GCAACTCCTGAGCCAACGCCCG 262
consensus_9621#2 GCTAGCCCACACGCAGGAGCTGGCGGCAGTGAGT----GGTGCAGCAGTGC-GGTGC-GA 259
consensus_9621#1 CCCCGTTCCAGTGTCCGGA-----CGTGGGCCGCTTCCCGAACCCCG-ACTCGCTCTAC- 592
consensus_9621#4 ------------------------------------------------------------
consensus_9621#0 CGACGGCGCAACGAACACATTGCCCACCACCACCACCACCACGTCCG-GCGCGTTCCAG- 953
consensus_9621#3 AACTTTCAACGAATATCCCGCTGACGACGCCAGGTTCTGCAACTCCT-GAGCCAACGCC- 320
consensus_9621#2 AACGGTCGGCTCGCTTCCGGCCGACGAGACGGACCGGTGCAGTGGCGCGTACTATCGCTG 319
consensus_9621#1 TGCAAGTCCTACTACCTCTGCCTGTAC---AGCCTGGCCGACGGCAACACGAATCTGATC 649
consensus_9621#4 ------------------------------------------------------------
consensus_9621#0 TGCCCGAACGAGGGCCGCTTTCCGAGCCCGGACGCTACCGGCTGCGAATCGTACGTGCTG 1013
consensus_9621#3 TGAACCATCAACAATTATTCCGTTGACGACACCAGGTTCTGCAAC--TCCTAAGCCAACG 378
consensus_9621#2 TGAGCTGCGGCCAACGGACAGCGTGCCGGTTCCGGTCGCTGCGCAATGTTCCGTCGGACG 379
consensus_9621#1 AGTGTGGAGCTGAGCTGC--CCCACTGGCGCCATTTTTGC---CACGGACGCGA-GCCGC 703
consensus_9621#4 -----------------C--CCCACTGGCGCCATCAGGGC---CACGGACGCGA-GCCGC 37
consensus_9621#0 TGCGTGCGCAACAGCCTCGGTACGCTGACGCCGCTCCAGTTCACCTGCCCGCCG-ACCAC 1072
consensus_9621#3 CCTGAGCCATCAACGATCATCCCGCTGACGACGCCAGGTTCTGCA-ACTCCTAA-GCCAA 436
consensus_9621#2 CGTGTACTCGCGCGAAGCGCGCCAGTGCGTGGACGCGGCGACGGTCGGGTGTAGCGGCAT 439
* * ** *
consensus_9621#1 TGCGTCAAGGAGGAGGGTTACCGGTGTGGGGTGGGCGGCG----GCGCTAC-CACTGCCG 758
consensus_9621#4 TGCGTCAAGGAGGAGGGTCACCGGTGTGGGGGGGGCGGCG----GCGCTAC-CACGGCCG 92
consensus_9621#0 CATCTTTTCGCCGA---CCCGCGCCATGTGCGTGACGGCG----GCCCTGCACACGTGCG 1125
consensus_9621#3 CGCCTGAGCCA------TCAACG--ATCATCCCGCTGACG----ACGCCAGGTTCTGCAA 484
consensus_9621#2 TGCGTTTGCCGGCCCGCGTGACGTCGGCTTCCAGTGTACGTCCAGCGGTAGGTTTCCCGA 499
* ** * ** *
consensus_9621#1 GTCCGGAGACGACCACGACGGCGGCGGCGACGACGACGACGACGACGACAA-CCACCACC 817
consensus_9621#4 GTCCGGAGACGACCACGACGGCGGCGACGACGACGACGACGACGACA------------- 139
consensus_9621#0 GCCAGGAGACGACCAGCGTCGCGCCACCGGCCACGACGACGACGACGACA---------- 1175
consensus_9621#3 CTTCTGAGCCAACGCCTGAGCCATCAACAATTATTCCGCTGACGACACCAG-GTTCTGCA 543
consensus_9621#2 TCTGGACGCGCCCGACTGCAAGGCGTACTTTCTGTGCACGAAGAACACGGACGGTTCGCT 559
* * * * * **
consensus_9621#1 ACCACCACTACGAC--CCCTGCGCCTACGACGACCACGCTCGGGCTGGAGGGTGCGT--- 872
consensus_9621#4 ACCACCACTACGAC--CCCGGCGCCTACGACGACCACGCTCGGGCTGGAGGGTGCGT--- 194
consensus_9621#0 ACCACCACTACGAC--CCCTGCGCCTACGACGACCACGCTCGGGCTGGAGGGTGCGT--- 1230
consensus_9621#3 ACTCCTAAGCCAAC--GCCTGAACCATCAACAATTATTCC---GCTGACGACGCCAG--- 595
consensus_9621#2 GATACCGGCCCGGGTGACCTGCCCCGGGGACGACCATCTTTTCGCCGGAAAAGATGTCGT 619
* * ** * ** ** * * ** *
consensus_9621#1 --GCCGGACGGCCGGCAAGTTCCCGACCGGGG---------------------------- 902
consensus_9621#4 --GCCGGACGGCCGGCAAGTACCCGACCGGGGTCGACGGCCGCTCGTACCAGTACCGCGT 252
consensus_9621#0 --GCAGGACGGCCGGCAAGTTCCCGACCGGGGTCGACTGCCGCTCGTACCAGTTCTGCGT 1288
consensus_9621#3 --GTTCTGCAACTCCTAAGCCAACGCCTGAG--CCATCAACGATCATCCCGCTGACGACG 651
consensus_9621#2 GCGTTTCGTCGCCGCCCAATGTGTGCCCGCAG-GCATCGACGGCGGCGCCGCCACCGAGC 678
* * * * * *
consensus_9621#1 ------------------------------------------------------------
consensus_9621#4 CCAGCTGCCGTCCGGCGAGCT--------------------------------------- 273
consensus_9621#0 CCAGCTGCCGTCCGGCGAGCTGGTCGAGTTTATCTTCCAGTGCCCGGGCACCACGCAGTA 1348
consensus_9621#3 CCAGGC------------------------------------------------------ 657
consensus_9621#2 ACAGCCGTCACGCCCGGACCGTTCGTGTGTCCCCGGCAAGGGC----------------- 721
consensus_9621#1 ---------
consensus_9621#4 ---------
consensus_9621#0 CGACGAGCA 1357
consensus_9621#3 ---------
consensus_9621#2 ---------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||