These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9631#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 16 consensus length = 926 fasta sequence [CAGAATCCCCCGCCGAAGAACCTTCCCTCGCGT--ACCGGGTTCAAATTCAGCGCAGAAAGTGAAACAATTCCAACACGTTTGTTGATGTAGCGAACATTTCC-TTTTTTTCCATTGCATACGATTATGCGCCTCGGACATTTGGGAAAAATCGGAATCGGCTGGGGCATCATCAGTGTGCTAGGCATTGGAGCGTTCGTCGCATCGAAAAATTCGGTCGACAAGAATCGCTACGAGAATATGAAAATTCGCGAACGAATGCGCCAATCGAACGTGGGTCAATACGAAGTCAAGGAAGCGCGACGGTTCGACGCATAAGGGAAACAACCGAAACACCCAGGAGCCTACCCCGCTTGAAAGAGGCAGCAAACGCAATATCAATCGACAATTTTGGATAACTTGTGGTTAGTTGTGAAAGCAAGAAGCAAACACCTCAACCGGCCACACCATGAGCATGCCCCAGCTGGACGCGGCCCAGCAGGCCAAACTGCAGCTGATGCAGGAGATGGAAATCGAAATGATGTCGGATCTGTACAGCCGCATGACACAGGCTTGCCACAAAAAGTGTATCCCACCAAAGTATGCCGACTCGGAGCTGGGAAA-GGGAGAATCGGTGTGCATTGACCGGTGTGTGGCAAAGTACCTGGAGGTGCACGAACGCATCGGCAAGAAGCTGACGGCAATGTCAGCGCAGGACGAGGATCTGAAAAAGAAGATGGGTGTGTAGAAAGGGTGAGCTCGAAGGCAAAGGCACTGTTAGAGTTAAATCCGTACCCGCATGTTAGCCACCAC-GTGTGTTGATTCGTTTTTTTTTACTTTTTATTCATTCATTACTTACTCAATGGTAAGCAATATTGGTAGCAGCAGTTCAGGGAGGGTCGGGAACTGCGTATGTTAGTTTTCAGTTGATCATTCGATGCGCATTTCGT] [+] EMBL AL934803 [CAGAATCCCCCGAGGTTTTAACTTCCCTCGCGT ACCGGGTTCAAATTCAGCGCAGAAAGTGAAACAATTCCAACACGTTTGTTGATGTAGCGAACATTTCC TTTTTTTCCATTGCATACGATTATGCGCCTCGGACATTTGGGAAAAATCGGAATCGGCTGGGGCATCATCAGTGTGCTAGGCATTGGAGCGTTCGTCGCATCGAAAAATTCGGTCGACAAGAATCGCTACGAGAATATGAAAATTCGCGAACGAATGCGCCAATCGAACGTGGGTCAATACGAAGTCAAGGAAGCGCGACGGTTCGACGCATAAGGGAAACAACCGAAACACCCAGGAGCCTACCCCGCTTGAAAGAGGCAGCAAACGCAATATCAATCGACAATTTTGGATAACTTGTGGTTAGTTGTGAAAGCAAGAAGCAAACACCTCAACCGGCCACACCATGAGCATGCCCCAGCTGGACGCGG CCAGCAGGCCAAACTGCAGCTGATGCAGGAGATGGAAATCGAAATGATGTCGGATCTGTACAGCCGCATGACACAGGCTTGCCACAAAAAGTGTATCCCANCAAAGTATGCCGACTCGGAGCTGGGAAA GGGAGAATCGGTGTGCATTGACCGGTGTGTGGCAAAGTACCTGGAGGTGCACGAACGCATCGGCA ] [+] EMBL BM599239 [ CCGAAGAACCTTCCCTCGCGT ACCGGGTTCAAATTCAGCACAGAAAGTGAAACAATTCCAACACGTTTGTTGATGTAGCAAACATTTCC TTTTTTTCCATTGCATACGATTATGCGCCTCGGACATTTGGGAAAAATCGGAATCGGCTGGGGCATCATCAGTGTGCTAGGCATTGGAGCGTTCGTCGCATCGAAAAATTCGGTCGACAAGAATCGCTACGAGAATATGAAAATTCGCGAACGAATGCGCCAATCGAACGTGGGTCAATACGAAGTCAAGGAAGCGCGACGGTTCGACGCATAAGGGAAGCAACCGAAACACCCAGGAGCCTACCCCGCTTGAAAGAGGCAGCAAACGCAATATCAATCGACAATTTTGGATAACTTGTGGTTAGTTGTGAAAGCAAGAAGCAAACACCTCAACCGGCCACACCATGAGCATGCCCCAGCTGGACGCGGCCCAGCAGGCCAAACTGCAGCTGATGCAGGAGATGGAAATCGAAATGATGTCGGATCTGTACAGCCGCATGACACAGGCTTGTCACAAAAAGTGTATCCCACCAAAGTATGCCGACTCGGAGCTGGGAAA GGGAGAATCGGTGTGCATTGACCGGTGTGTGGCAAAGTACCTGGAGGTGCACGAACGCATCGGCAA ] [+] EMBL BM576756 [ CCGAAGAACCTTCCCTCGCGT ACCGGGTTCAAATTCAGCACAGAAAGTGAAACAATTCCAACACGTTTGTTGATGTAGCAAACATTTCC TTTTTTTCCATTGCATACGATTATGCGCCTCGGACATTTGGGAAAAATCGGAATCGGCTGGGGCATCATCAGTGTGCTAGGCATTGGAGCGTTCGTCGCATCGAAAAATTCGGTCGACAAGAATCGCTACGAGAATATGAAAATTCGCGAACGAATGCGCCAATCGAACGTGGGTCAATACGAAGTCAAGGAAGCGCGACGGTTCGACGCATAAGGGAAGCAACCGAAACACCCAGGAGCCTACCCCGCTTGAAAGAGGCAGCAAACGCAATATCAATCGACAATTTTGGATAACTTGTGGTTAGTTGTGAAAGCAAGAAGCAAACACCTCAACCGGCCACACCATGAGCATGCCCCAGCTGGACGCGGCCCAGCAGGCCAAACTGCAGCTGATGCAGGAGATGGAAATCGAAATGATGTCGGATCTGTACAGCCGCATGACACAGGCTTGTCACAAAAAGTGTATCCCACCAAAGTATGCCGACTCGGAGCTGGGAAAGGGGAGAATCGGTGTGCATTGACCGGTGTGTGGCAAAGTACCTGGAGGTGCACGAACGCATCGGCAAG ] [+] EMBL BX607032 [ TTCCCTCGCGT ACCGGGTTCAAATTCAGCGCAGAAAGTGAAACTATTCCAACACGTTTGTTGATGTAGCGAACATTTCCTTTTTTTTCCATTGCATACGATTATGCGCCTCGGACATTTGGGAAAAATCGGAATCGGCTGGGGCATCATCAGTGTGCTAGGCATTGGAGCGTTCGTCGCATCGAAAAATTCGGTCGACAAGAATCGCTACGAGAATATGAAAATTCGCGAACGAATGCGCCAATCGAACGTGGGTCAATACGAAGTCAAGGAAGCGCGACGGTTCGACGCATAAGGGAAACAACCGAAACAC ] [+] EMBL BM631403 [ gaCCCACGCGTCCGCCGGGTTCAAATTCAGCGCAGAAAGTGAAACTATTCCAACACGTTTGTTGATGTAGCGAACATTTCCTTTTTTTTCCATTGCATACGATTATGCGCCTCGGACATTTGGGAAAAATCGGAATCGGCTGGGGCATCATCAGTGTGCTAGGCATTGGAGCGTTCGTCGCATCGAAAAATTCGGTCGACAAGAATCGCTACGAGAATATGAAAATTCGCGAACGAATGCGCCAATCGAACGTGGGTCAATACGAAGTCAAGGAAGCGCGACGGTTCGACGCATAAGGGAAACAACCGAAACACCCAGGAGCCTACCCCGCTTGAAAGAGGCAGCAAACGCAATATCAATCAACAATTTTGGATAACTTGTGGTTAGTTGTGAAAGCAAGAAGCAAACACCTCAACCGGCCACACCATGAGCATGCCCCAGCTGGACGCGGCCCAGCAGGCCAAACTGCAGCTGATGCAGGAGATGGAAATCGAAATGATGTCGGATCTGTACAGCCGCAT ] [+] EMBL BX627144 [ CCCTCGCGT ACCGGGTTCAAATTCAGCGCAGAAAGTGAAACTATTCCAACACGTTTGTTGATGTAGCGAACATTTCCTTTTTTTTCCATTGCATACGATTATGCGCCTCGGACATTTGGGAAAAATCGGAATCGGCTGGGGCATCATCAGTGTGCTAGGCATTGGAGCGTTCGTCGCATCGAAAAATTCGGTCGACAAGAATCGCTACGAGAATATGAAAATTCGCGAACGAATGCGCCAATCGAACGTGGGTCAATACGAAGTCAAGGAAGCGCGACGGTTCGACGCATAAGGGAAACAACCGAAACACCCAGGAGCCTACCCCGCTTGAAAGAGGCAGCAAACGCAATATCAATCAACAATTTTGGATAACTTGTGGTTAGTTGTGAAAGCAAGAAGCAAACACCTCAACCGGCCACACCATGAGCATGCCCCAGCTGGACGCGGCCCAGCAGGCCAAACTGCAGCTGATGCAGGAGATGGAAATCGAAATGATGTCGGATCTGTACAGCCGCATGACACAGGCTTGCCACAAAAAGTGTATCCCACCAAAGTATGCCGACTCGGAGCTGGGAAA NGGAGAATCGGTGTGCATTGACCGGTGTGTGGCAAAGTACCTGGANGTGCACGAACGCATCCGCAAGAAGCTGACCGCAATGTCAGCGCAGGACGAGG ] [+] EMBL BX606843 [ CCCTCGCGT ACCGGGTTCAAATTCAGCGCAGAAAGTGAAACAATTCCAACACGTTTGTTGATGTAGCGAACATTTCC TTTTTTTCCATTGCATACGATTATGCGCCTCGGACATTTGGGAAAAATCGGAATCGGCTGGGGCATCATCAGTGTGCTAGGCATTGGAGCGTTCGTCGCATCGAAAAATTCGGTCGACAAGAATCGCTACGAGAATATGAAAATTCGCGAACGAATGCGCCAATCGAACGTGGGTCAATACGAAGTCAAGGAAGCGCGACGGTTCGACGCATAAGGGAAGCAACCGAAACACCCAGGAGCCTACCCCGCTTGAAAGAGGCAGCAAACGCAATATCAATCGACAATTTTGGATAACTTGTGGTTAGTTGTGAAAGCAAGAAGCAAACTCCTCAACCGGCCACACCATGAGCATGCCCCAGCTGGACGCGGCCCAGCAGGCCAAACTGCAGCTGATGCAGGAGATGGAAATCGAAATGATGTCGGATCTGTACAGCCGCATGACACA ] [+] EMBL BM643695 [ ccgCTCGCGT ACCGGGTTCAAATTCAGCGCAGAAAGTGAAACAATTCCAACACGTTTGTTGATGTAGCGAACATTTCC TTTTTTTCCATTGCATACGATTATGCGCCTCGGACATTTGGGAAAAATCGGAATCGGCTGGGGCATCATCAGTGTGCTAGGCATTGGAGCGTTCGTCGCATCGAAAAATTCGGTCGACAAGAATCGCTACGAGAATATGAAAATTCGCGAACGAATGCGCCAATCGAACGTGGGTCAATACGAAGTCAAGGAAGCGCGACGGTTCGACGCATAAGGGAAACAACCGAAACACCCAGGAGCCTACCCCGCTTGAAAGAGGCAGCAAACGCAATATCAATCGACAATTTTGGATAACTTGTGGTTAGTTGTGAAAGCAAGAAGCAAACACCTCAACCGGCCACACCATGAGCATGCCCCAGCTGGACGCGGCCCAGCAGGCCAAACTGCAGCTGATGCAGGAGATGGAAATCGAAATGATGTCGGATCTG ] [+] EMBL BX623554 [ TGAAACAATTCCAACACGTTTGTTGATGTAGCGAACATTTCC TTTTTTTCCATTGCATACGATTATGCGCCTCGGACATTTGGGAAAAATCGGAATCGGCTGGGGCATCATCAGTGTGCTAGGCATTGGAGCGTTCGTCGCATCGAAAAATTCGGTCGACAAGAATCGCTACGAGAATATGAAAATTCGCGAACGAATGCGCCAATCGAACGTGGGTCAATACGAAGTCAAGGAAGCGCGACGGTTCGACGCATAAGGGAAACAACCGAAACACCCAGGAGCCTACCCCGCTTGAAAGAGGCAGCAAACGCAATATCAATCGACAATTTTGGATAACTTGTGGTTAGTTGTGAAAGCAAGAAGCAAACACCTCAACCGGCCACACCATGAGCATGCCCCAGCTGGACGCGGCCCAGCAGGCCAAACTGCAGCTGATGCAGGAGATGGAAATCGAAATGATGTCGGATCTGTACAGCCGCATGACACAGGCTTGCCACAAAAAGTGTATCCCACCAAAGTATGCCGACTCGGAGCTGGGAAA GGGAGAATCGGTGTGCATTGACCGGTGTGTGGCAAAGTACCTGGAGGTGCACGAACGCATCGGCAAGAAGCTGACGGCAATGTCAGCGCAGGACGAGGATCTGAAAAAGAAGATGGGTGTGTAGAAAGGGTGAGCTCGAANGCAAAGGCACTGTTAGAGTTAAATCCGTACCCGCATGTTAGCCACCAC GTGTGTTGATTCGTTTTTTTTTACTTTTTATTCATTCATTACTTACTCAATGGTAAGCAATATTGGTAG ] [+] EMBL BM618039 [ ccgGAAACAATTCCAACACGTTTGTTGATGTAGCGAACATTTCC TTTTTTTCCATTGCATACGATTATGCGCCTCGGACATTTGGG AAATCGGAATCGGCTGGGGCATCATCAGTGTGCTAGGCATTGGAGCGTTCGTCGCATCGAAAAATTCGGTCGACAAGAATCGCTACGAGAATATGAAAATTCGCGAACGAATGCGCCAATCGAACGTGGGTCAATACGAAGTCAAGGAAGCGCGACGGTTCGACGCATAAGGGAAACAACCGAAACACCCAGGAGCCTACCCCGCTTGAAAGAGGCAGCAAACGCAATATCAATCGACAATTTTGGATAACTTGTGGTTAGTTGTGAAAGCAAGAAGCAAACACCTCAACCGGCCACACCATGAGCATGCCCCAGCTGGACGCGGCCCAGCAGGCCAAACTGCAGCTGATGCAGGAGATGGAAATCGAAATGATGTCGGATCTGTACAGCCGCATGACACAGGCTTGCCACAAAAAGTGTATCCCACCAAAGTATGCCGACTCGGAGCTGGGAAA GGGAGAATCGGTGTGCATTGACCGGTGTGTGGCAAGGTACCTGGAGGTGCACGAACGCATCGGCAAGAAGCTGACGGCAATGTCAGCGCAGGACGAGGATCTGAAAAAGAAGATGGGTGTGTAGAAAGGGTGAGCTCGAAGGCAAAGGCACTGTTAGAGTTAAATCCGTACCCGCATGTTAGCCACCACGGGGGGTTAATTCGTTTTTTTTTtttac ] [+] EMBL BX627029 [ AACACGTTTGTTGATGTAGCGAACATTTCC TTTTTTTCCATTGCATACGATTATGCGCCTCGGACATTTGGGAAAAATCGGAATCGGCTGGGGCATCATCAGTGTGCTAGGCATTGGAGCGTTCGTCGCATCGAAAAATTCGGTCGACAAGAATCGCTACGAGAATATGAAAATTCGCGAACGAATGCGCCAATCGAACGTGGGTCAATACGAAGTCAAGGAAGCGCGACGGTTCGACGCATAAGGGAAGCAACCGAAACACCCAGGAGCCTACCCCGCTTGAAAGAGGCAGCAAACGCAATATCAATCGACAATTTTGGATAACTTGTGGTTAGTTGTGAAAGCAAGAAGCAAACTCCTCAACCGGCCACACCATGAGCATGCCCCAGCTGGACGCGGCCCAGCAGGCCAAACTGCAGCTGATGCAGGAGATGGAAATCGAAATGATGTCGGATCTGTACAGCCGCATGACACAGGCTTGCCACAAAAAGTGTATCCCACCAAAGTATGCCGACTCGGAGCTGGGAAA GGGAGAATCGGTGTGCATTGACCGGTGTGTGGCAAAGTACCTGGAGGTGCACGAACGCATCGGCA ] [+] EMBL BX626425 [ TTTGTTGATGTAGCGAACATTTCC TTTTTTTCCATTGCATACGATTATGCGCCTCGGACATTTGGGAAAAATCGGAATCGGCTGGGGCATCATCAGTGTGCTAGGCATTGGAGCGTTCGTCGCATCGAAAAATTCGGTCGACAAGAATCGCTACGAGAATATGAAAATTCGCGAACGAATGCGCCAATCGAACGTGGGTCAATACGAAGTCAAGGAAGCGCGACGGTTCGACGCATAAGGGAAGCAACCGAAACACCCAGGAGCCTACCCCGCTTGAAAGAGGCAGCAAACGCAATATCAATCGACAATTTTGGATAACTTGTGGTTAGTTGTGAAAGCAAGAAGCAAACTCCTCAACCGGCCACACCATGAGCATGCCCCAGCTGGACGCGGCCCAGCAGGCCAAACTGCAGCTGATGCAGGAGATGGAAATCGAAATGATGTCGGATCTGTACAGCCGCATGACACAGGCTTGCCACAAAAAGTGTATCCCACCAAAGTATGCCGACTCGGAGCTGGGAAA GGGAGAATCGGTGTGCATTGACCGGTGTGTGGCAAAGTACCTGGAGGTGCACGAACGCATCGGCAAGAAGCTGACGGCAATGTCAGCGCAGGACGAGGATCTGAAAAAGAAGATGGGTGTGTAGAAAGGGT ] [+] EMBL BM613283 [ TTTCC TTTTTTTCCATTGCATACGATTATGCGCCTCGGACATTTGGGAAAAATCGGAATCGGCTGGGGCATCATCAGTGTGCTAGGCATTGGAGCGTTCGTCTCATCGAAAAATTCTGTCGACAAGAATCTCTACAAGAATATGAAAATTCGCGAACGAATGCGCCAATCGAACGTGGGTCAATACGAAGTCAAGGAAGCGCGACGGTTCGACGCATAAGGGAAACAACCGAAACACCCAGGAGCCTACCCCGC ] [+] EMBL BX615706 [ ACGATTATGCGCCTCGGACATTTGGGAAAAATCGGAATCGGCTGGGGCATCATCAGTGTGCTAGGCATTGGAGCGTTCGTCGCATCGAAAAATTCGGTCGACAAGAATCGCTACGAGAATATGAAAATTCGCGAACGAATGCGCCAATCGAACGTGGGTCAATACGAAGTCAAGGAAGCGCGACGGTTCGACGCATAAGGGAAACAACCGAAACACCCAGGAGCCTACCCCGCTTGAAAGAGGCAGCAAACGCAATATCAATCGACAATTTTGGATAACTTGTGGTTAGTTGTGAAAGCAAGAAGCAAACACCTCAACCGGCCACACCATGAGCATGCCCCAGCTGGACGCGGCCCAGCAGGCCAAACTGCAGCTGATGCAGGAGATGGAAATCGAAATGATGTCGGATCTGTACAGCCGCATGACACAGGCTTGCCACAAAAAGTGTATCCCACCAAAGTATGCCGACTCGGAGCTGGGAAA GGGAGAATCGGTGTGCATTGACCGGTGTGTGGCAAAGTACCTGGAGGTGCACGAACGCATCGGCAAGAAGCTGACGGCAATGTCAGCGCA ] [+] EMBL BX616015 [ CGATTATGCGCCTCGGACACTCGGGAAAAATCGGAATCGGCGGGGGCATCATCAGTGTGCTAGGCATCGGAGCGTCCGTCGCATCGAAAAATGCGGCCGACAAGAATCGCTACGAGAATATGAAAATCCGCGAACGAAGGCGCCAATCGAACGTGGGTCAATACGAAGTCAAGGAAGCGCGACGGTCCGACGCATAAGGGAAGCAACCGAAACACCCAGGAGCCTACCCCGCTGGAAAGAGGCAGCAAACGCAATATCAATCGACAATCCCGGATAACTCGTGGTCAGTCGTGAAAGCAAGAAGCAAACTCCTCAACCGGCCACACCATGAGCATGCCCCAGCTGGACGCGGCCCAGCAGGCCAAACTGCAGCTGAAGCAGGAGATGGAAATCGAAATGATGTCGGAACTGTACAGCCGCATGACACAGGCTGGCCACAAAAAGGGTATCCCACCAAAGTAGGCCGACTCGGAGCTGGGAAA GGGAGAATCGGTGTGCATCGACCGGTGTGTGGCAAAGTACCTGGAGGTGCACGAACGCATCGGCAAGAAGCTGACGGCAATGGCAGCGCAGGA ] [+] EMBL BM628293 [ ccgGGGAAACAACCGAAACACCCAGGAGCCTACCCCGCTTGAAAGAGGCAGCAAACGCAATATCAATCGACAATTTTGGATAACTTGTGGTTAGTTGTGAAAGCAAGAAGCAAACACCTCAACCGGCCATACCATGAGCATGCCCCAGCTGGACGCGGCCCAGCAGGCCAAACTACAGCTGATGCAGGAGATGGAAATCGAAATGATGTCGGATCTGTACAGTCGCATGACACAGGCTTGCCACAAAAAGTGTATCCCACCAAAGTATGCCGACTCGGATCTGGGAAA GGGAGAATCGGTGTGCATTGACCGGTGTGTGGCAAAGTACCTGGAGGTGCACGAACGCATCGGCAAGAAGCTGACGGCAATGTCAGCGCAGGACGAGGATCTGAAAAAGAAGATGGGTGTGTAGAAAGGGTGAGCTCGAAGGCAAAGGCACTGTTAGAGTTAAATCCGTACCCGCATGGCAGCCATCAT GTGTGTTGATTCG TTTTTTTTACTTTTTATTCATTCATTACTTACTCAATGGTAAGCAATATTGGTAGCAGCAGTTCAGGGAGGGTCGGGAACTGCGTATGTTAGTTTTCAGTTGATCATTCGATGCGCATTTCGT] consensusID : consensus_9631#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 563 fasta sequence [CCCCGAGGTCACACGTTTGTTGATGTAGCGAACATTTCCTTTTTTTCCATTGCATACGATTATGCGCCTCGGACATTTGGGAAAAATCGGAATCGGCTGGGGCATCATCAGTGTGCTAGGCATTGGAGCGTTCGTCGCATCGAAAAATTCGGTCGACAAGAATCGCTACGAGAATATGAAAATTCGCGAACGAATGCGCCAATCGAACGTGGGTCAATACGAAGTCAAGGAAGCGCGACGGTTCGACGCATAAGGGAAGCAACCGAAACACCCAGGAGCCTACCCCGCTTGAAAGAGGCAGCAAACGCAATATCAATCGACAATTTTGGATAACTTGTGGTTAGTTGTGAAAGCAAGAAGCAAACTCCTCAACCGGCACACCATGAGCATGCCCCAGCTGGACGCGGCCAGCAGGCCAAACTGAGCTGATGCAGGAGATGGAAATCGAAATGATGTCGGATCTGTACAGCCGCATGACACAGGCTTGCCACAAAAAGTGTATCCCACCAAAGTATGGCGACTCGGAGCTGGGAAAGGGAGAATCGGTGTGCATTGACCGGTGT] [+] EMBL AL931854 [CCCCGAGGTCACACGTTTGTTGATGTAGCGAACATTTCCTTTTTTTCCATTGCATACGATTATGCGCCTCGGACATTTGGGAAAAATCGGAATCGGCTGGGGCATCATCAGTGTGCTAGGCATTGGAGCGTTCGTCGCATCGAAAAATTCGGTCGACAAGAATCGCTACGAGAATATGAAAATTCGCGAACGAATGCGCCAATCGAACGTGGGTCAATACGAAGTCAAGGAAGCGCGACGGTTCGACGCATAAGGGAAGCAACCGAAACACCCAGGAGCCTACCCCGCTTGAAAGAGGCAGCAAACGCAATATCAATCGACAATTTTGGATAACTTGTGGTTAGTTGTGAAAGCAAGAAGCAAACTCCTCAACCGGCACACCATGAGCATGCCCCAGCTGGACGCGGCCAGCAGGCCAAACTGAGCTGATGCAGGAGATGGAAATCGAAATGATGTCGGATCTGTACAGCCGCATGACACAGGCTTGCCACAAAAAGTGTATCCCACCAAAGTATGGCGACTCGGAGCTGGGAAAGGGAGAATCGGTGTGCATTGACCGGTGT] [+] EMBL BX618919 [ GTGTGCTAGGCATAGGAGCGTTCGTCGCAACGAAAAATACGGTCGACAAGAATCGCGACGAGAATATGAAAATTCGCGAACGAAGGCGCCAATCGAACGGGGGTCAATACGAAGTCAAGGAAGCGCGACGGTACGACGCATAAGGGAAGCAACCGAAACACCCAGGAGCCTACCCCGCTTGAAAGAGGCAGCAAACGCAATAT ] consensusID : consensus_9631#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 336 fasta sequence [CCGGCTCCACCGCCGTACAGTGTTTCGTAAGAACCTTCCCTCGCGTACCGGGTTCAAATTCAGCACAGAAAGTGAAACAATTCCAACACGTTTGTTGATGTAGCAAACATTTCCTTTTTTTCCATTGCATACGATTATGCGCCTCGGACATTTGGGAAAAATCGGAATCGGCTGGGGCATCATCAGTGTGCTAGGCATTGGAGCGTTCGTCGCATCGAAAAATTCGGTCGACAAGAATCGCTACGAGAATATGAAAATTCGCGAACGAATGCGCCAATCGAACGTGGGTCAATACGAAGTCAAGGAAGCGCGACGGTTCGACGCATAAGGGAAGCA] [+] EMBL BM580788 [CCGGCTCCACCGCCGTACAGTGTTTCGTAAGAACCTTCCCTCGCGTACCGGGTTCAAATTCAGCACAGAAAGTGAAACAATTCCAACACGTTTGTTGATGTAGCAAACATTTCCTTTTTTTCCATTGCATACGATTATGCGCCTCGGACATTTGGGAAAAATCGGAATCGGCTGGGGCATCATCAGTGTGCTAGGCATTGGAGCGTTCGTCGCATCGAAAAATTCGGTCGACAAGAATCGCTACGAGAATATGAAAATTCGCGAACGAATGCGCCAATCGAACGTGGGTCAATACGAAGTCAAGGAAGCGCGACGGTTCGACGCATAAGGGAAGCA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9631#0 -------------CAGAATCCCCCGCCGAAGAACCTTCCCTCGCGTACCGGGTTCAAATT 47 consensus_9631#1 ------------------------------------------------------------ consensus_9631#2 CCGGCTCCACCGCCGTACAGTGTTTCGTAAGAACCTTCCCTCGCGTACCGGGTTCAAATT 60 consensus_9631#0 CAGCGCAGAAAGTGAAACAATTCCAACACGTTTGTTGATGTAGCGAACATTTCCTTTTTT 107 consensus_9631#1 --------------CCCCGAGGTCA-CACGTTTGTTGATGTAGCGAACATTTCCTTTTTT 45 consensus_9631#2 CAGCACAGAAAGTGAAACAATTCCAACACGTTTGTTGATGTAGCAAACATTTCCTTTTTT 120 * * ** ****************** *************** consensus_9631#0 TCCATTGCATACGATTATGCGCCTCGGACATTTGGGAAAAATCGGAATCGGCTGGGGCAT 167 consensus_9631#1 TCCATTGCATACGATTATGCGCCTCGGACATTTGGGAAAAATCGGAATCGGCTGGGGCAT 105 consensus_9631#2 TCCATTGCATACGATTATGCGCCTCGGACATTTGGGAAAAATCGGAATCGGCTGGGGCAT 180 ************************************************************ consensus_9631#0 CATCAGTGTGCTAGGCATTGGAGCGTTCGTCGCATCGAAAAATTCGGTCGACAAGAATCG 227 consensus_9631#1 CATCAGTGTGCTAGGCATTGGAGCGTTCGTCGCATCGAAAAATTCGGTCGACAAGAATCG 165 consensus_9631#2 CATCAGTGTGCTAGGCATTGGAGCGTTCGTCGCATCGAAAAATTCGGTCGACAAGAATCG 240 ************************************************************ consensus_9631#0 CTACGAGAATATGAAAATTCGCGAACGAATGCGCCAATCGAACGTGGGTCAATACGAAGT 287 consensus_9631#1 CTACGAGAATATGAAAATTCGCGAACGAATGCGCCAATCGAACGTGGGTCAATACGAAGT 225 consensus_9631#2 CTACGAGAATATGAAAATTCGCGAACGAATGCGCCAATCGAACGTGGGTCAATACGAAGT 300 ************************************************************ consensus_9631#0 CAAGGAAGCGCGACGGTTCGACGCATAAGGGAAACAACCGAAACACCCAGGAGCCTACCC 347 consensus_9631#1 CAAGGAAGCGCGACGGTTCGACGCATAAGGGAAGCAACCGAAACACCCAGGAGCCTACCC 285 consensus_9631#2 CAAGGAAGCGCGACGGTTCGACGCATAAGGGAAGCA------------------------ 336 ********************************* ** consensus_9631#0 CGCTTGAAAGAGGCAGCAAACGCAATATCAATCGACAATTTTGGATAACTTGTGGTTAGT 407 consensus_9631#1 CGCTTGAAAGAGGCAGCAAACGCAATATCAATCGACAATTTTGGATAACTTGTGGTTAGT 345 consensus_9631#2 ------------------------------------------------------------ consensus_9631#0 TGTGAAAGCAAGAAGCAAACACCTCAACCGGCCACACCATGAGCATGCCCCAGCTGGACG 467 consensus_9631#1 TGTGAAAGCAAGAAGCAAACTCCTCAACCGGC-ACACCATGAGCATGCCCCAGCTGGACG 404 consensus_9631#2 ------------------------------------------------------------ consensus_9631#0 CGGCCCAGCAGGCCAAACTGCAGCTGATGCAGGAGATGGAAATCGAAATGATGTCGGATC 527 consensus_9631#1 CGGCC-AGCAGGCCAAACTG-AGCTGATGCAGGAGATGGAAATCGAAATGATGTCGGATC 462 consensus_9631#2 ------------------------------------------------------------ consensus_9631#0 TGTACAGCCGCATGACACAGGCTTGCCACAAAAAGTGTATCCCACCAAAGTATGCCGACT 587 consensus_9631#1 TGTACAGCCGCATGACACAGGCTTGCCACAAAAAGTGTATCCCACCAAAGTATGGCGACT 522 consensus_9631#2 ------------------------------------------------------------ consensus_9631#0 CGGAGCTGGGAAAGGGAGAATCGGTGTGCATTGACCGGTGTGTGGCAAAGTACCTGGAGG 647 consensus_9631#1 CGGAGCTGGGAAAGGGAGAATCGGTGTGCATTGACCGGTGT------------------- 563 consensus_9631#2 ------------------------------------------------------------ consensus_9631#0 TGCACGAACGCATCGGCAAGAAGCTGACGGCAATGTCAGCGCAGGACGAGGATCTGAAAA 707 consensus_9631#1 ------------------------------------------------------------ consensus_9631#2 ------------------------------------------------------------ consensus_9631#0 AGAAGATGGGTGTGTAGAAAGGGTGAGCTCGAAGGCAAAGGCACTGTTAGAGTTAAATCC 767 consensus_9631#1 ------------------------------------------------------------ consensus_9631#2 ------------------------------------------------------------ consensus_9631#0 GTACCCGCATGTTAGCCACCACGTGTGTTGATTCGTTTTTTTTTACTTTTTATTCATTCA 827 consensus_9631#1 ------------------------------------------------------------ consensus_9631#2 ------------------------------------------------------------ consensus_9631#0 TTACTTACTCAATGGTAAGCAATATTGGTAGCAGCAGTTCAGGGAGGGTCGGGAACTGCG 887 consensus_9631#1 ------------------------------------------------------------ consensus_9631#2 ------------------------------------------------------------ consensus_9631#0 TATGTTAGTTTTCAGTTGATCATTCGATGCGCATTTCGT 926 consensus_9631#1 --------------------------------------- consensus_9631#2 --------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||