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Anopheles gambiae
cluster # 9643 cluster # 9643       Sequences # 19       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9643#0 length = 1148 sequences # 17  
consensus_9643#1 length = 268 sequences # 2  

consensusID : consensus_9643#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 17
consensus length = 1148
fasta sequence
                              [CCGGTGGTTCGGTGCTCGGTACGGCCGGAAGCAAAATGTCGTCGTTCCGCAAGGTGACTCACTGTATCTTCGACATGGACGGGCTGTTGCTTGACACGGAAAATCTTTACACGCAGGTAACGCAATCGATCGCGGAACCGTACGGCAAAACGTACACGTGGGAGATCAAGCAAACGATCATGGGGCTGCAGCGGGACGAAGCGGCCGAAGCGATCGTCGCCGCCCTCGAGCTACCGCTGACACCGGCCGAGTACGTGGAGATATCGACCGAGCGGATCAATCGCGTGATGGAACAGTGTCAGCTAATGCCAGGCGCAGAGCGGCTGGTGCGCCATCTGCACCAACACAACGTGCCGATCGCGCTGGCCACCAGCTCGGGAGCGGATTCGGTCGAGGTGAAGACAAAGAACCACCGCGAGCTGTTCGAGCTGTTCGGGCACAAGGTGATGGGTTCGTCCGATCCCGACGTGAAGGAGGGTAAGCCGGCGCCCGATATCTTCCTGGTCGCAGCGGACCGCTTCCCGGACCGGCCCGCTCCCGACCAGTGCCTGGTGTTTGAGGATGCGCCGAACGGTGTGACGGCAGCGATTGCGGCCGGCATGCAGGCCGTCATGGTGCCCGATCCGCACATCGAGGAGGACCAGCGGAAGCACGCGACGGTCGTGCTGAAATCACTCGAGGACTTCCACCCGGAACAGTTCGGTTTGCCGCCGTTTACGTCGTGAACCACGCGTGGGACGCTTTTGACGACTACCCCGGAGCCGGCCATTACT-CCCCG----AAAAAAA-------GCTTATAACTACTACTACCACTACTACTACTACTACAACTGCAAGCCGTAACGTAGTGTGTGTGTGTGCGGCACACGTCCGATTTTAGCAGAGCAGTGTTCTAAACACATCACCACC-GTTGGAGCGAAATTTTGATGAAGCGCGCGCCCGCACACGTTTCGTTTGCGTAGAACGCACAAGCGTCCAACCCG-CAAAAGGGGTCCACTGCCGGGTGGGACGGACGTTAGTTTGTATTTAGTTTTATTTCTCGGAAAGCTTTTTCTTTAGGTGCGCGATCGATGTGTATCGCTAGAATGTGAAATCGCTTGATTGAGCGCCCGTCAATGCGAACAAAAAAAGAAAAAAAAAGAAAATACAAGGCGG]

[+] EMBL BM641536             [CCGGTGGTTCGGTGCTCGGTACGGCCGGAAGCAAAATGTCGTCGTTCCGCAAGGTGACTCACTGTATCTTCGACATGGACGGGCTGTTGCTTGACACGGAAAATCTTTACACGCAGGTAACGCAATCGATCGCGGAACCGTACGGCAAAACGTACACGTGGGAGATCAAGCAAACGATCATGGGGCTGCAGCGGGACGAAGCGGCCGAAGCGATCGTCGCCGCCCTAGAGCTACCGCTGACACCGGCCGAGTACGTGGAGATATCGACCGAGCGGATCAATCGCGTGATGGAACAGTGTCAGCTAATGCCAGGCGCAGAGCGGCTGGTGCGCCATCTGCACCAACACAACGTGCCGATCGCGCTGGCCACCAGCTCGGGAGCGGATTCGGTCGAGGTGAAGACAAAGAACCACCGCGAGCTGTTCGAGCTGTTCGGGCACAAGGTGATGGGTTCGTCCGATCCCGACGTGAAGGAGGGTAAGCCGGCACCGGACATCTTTCTGGTCGCCGCGGACCGCTTCCCGGACCGGCCCGCTCCCGACCAGTGCCTGGTGTTTGAGGATGCGCCGAACGGTGTGACGGCAGCGATTGCGGCCGGCATGCAGGCCGTCATGGTGCCCGATCCACACATCGAGGAGGACCAGCGGAAGCACGCGACGGTCGTGCTGAAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BM631639             [        cCGGTGCTCGGCACGGCCGGAAGCAAAATGTCGTCGTTCCGCAAGGTGACTCACTGTATCTTCGACATGGACGGGCTGTTGCTTGACACGGAAAATCTTTACACGCAGGTAACGCAATCGATCGCGGAACCGTACGGCAAAACGTACACGTGGGAGATCAAGCAAACGATCATGGGGCTGCAGCGGGACGAAGCGGCCGAAGCGATCGTCGCCGCCCTAGAGCTACCGCTGACACCGGCCGAGTACGTGGAGATATCGACCGAGCGGATCAATCGCGTGATGGAACATTGTCAGCTAATGCCAGGTGCAGAGCGGCTGGTGCGCCATCTGCACCAACACAACGTGCCGATCGCGCTGGCCACCAGCTCGGGAGCGGATTCcg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CNS096BR             [                    ACGGCCGGAAGCAAAATGTCGTCGTTCCGCAAGGTGACTCACTGTATCTTCGACATGGACGGGCTGTTGCTTGACACGGAAAATCTTTACACGCAGGTAACGCAATCGATCGCGGAACCGTACGGCAAAACGTACACGTGGGAGATCAAGCAAACGATCATGGGGCTGCAGCGGGACGAAGCGGCCGAAGCGATCGTCGCCGCCCTCGAGCTACCGCTGACACCGGCCGAGTACGTGCAGATATCGACCGAGCGGATCAATCGCGTGATGGAACAGTGTCAGCTAATGCCAGGTGCAGAGCGGCTGGTGCGCCATCTGCACCAACACAACGTGCCGATCGCGCTGGCCACCAGCTCGGGAGCGGATTCGGTCGAGGTGAAGACAAAGAACCACCGCGAGCTGTTCGAGCTGTTCGGGCACAAGGTGATGGGTTCGTCCGATCCCGACGTGAAGGAGGGTAAGCCGGCGCCCGATATCTTCCTGGTCGCAGCGGACCGCTTCCCGGACCGGCCCGCTCCCGACCAGTGCCTGGTGTTTGAGGATGCGCCGAACGGTGTGACGGCAGCGATTGCGGCCGGCATGCAGGCCGTCATGGTGCCCGATCCGCACATCGAGGAGGACCAGCGGAAGCACGCGACGGTCGTGCTGAAATCACTCGAGGACTTCCATCCGGAACAGTTCGGTTTGCCGCCGTTTACGTCGTGAACCACTCGTGGGACGCTTTTGACGACTATCCTGGAGCCGGCCATTACTCCCCCG    AAAAAAAAAAAAATGCTTACAACTACTACCACTACTACTACTACTAC                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BM648809             [                     ccGCCGGAAGCAAAATGTCGTCGTTCCGCAAGGTGACTCACTGTATCTTCGACATGGACGGGCTGTTGCTTGACACGGAAAATCTTTACACGCAGGTAACGCAATCGATCGCGGAACCGTACGGCAAAACGTACACGTGGGAGATCAAGCAAACGATCATGGGGCTGCAGCGGGACGAAGCGGCCGAAGCGATCGTCGCCGCCCTCGAGCTACCGCTGACACCGGCCGAGTACGTGGAGATATCGACCGAGCGGATCAATCGCGTGATGGAACAGTGTCAGCTAATGCCAGGCGCAGAGCGGCTGGTGCGCCATCTGCACCAACACAACGTGCCGATCGCGCTGGCCACCAGCTCGGGAGCGGATTCGGTCGAGGTGAAGACAAAGAACCACCGCGAGCTGTTCGAGCTGTTCGGGCACAAGGTGATGGGTTCGTCCGATCCCGACGTGAAGGAGGGTAAGCCGGCGCCCGATATCTTCCTGGTCGCAGCGGACCGCTTCCCGGACCGGCCCGCTCCCGACCAGTGCCTGGTGTTTGAGGATGCGCCGAACGGTGTGACGGCCGCGATTGCGGCCGGCATGCAGGCCGTCATGGTGCCCGATCCGCACATCGAGGAGGACCAGCGGAAGCACGCGACGGTCGTGCTGAAATCACTCGAGGACTTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BX611411             [                            AAGCAAAATGTCGTCGTTCCGCAAGGTGACTCACTGTATCTTCGACATGGACGGGCTGTTGCTTGACACGGAAAATCTTTACACGCAGGTAACGCAATCGATCGCGGAACCGTACGGCAAAACGTACACGTGGGAGATCAAGCAAACGATCATGGGGCTGCAGCGGGACGAAGCGGCCGAAGCGATCGTCGCCGCCCTCGAGCTACCGCTGACACCGGCCGAGTACGTGGAGATATCGACCGAGCGGATCAATCGCGTGATGGAACAGTGTCAGCTAATGCCAGGCGCAGAGCGGCTGGTGCGCCATCTGCACCAACACAACGTGCCGATCGCGCTGGCCACCAGCTCGGGAGCGGATTCGGTCGAGGTGAAGACAAAGAACCAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BX602101             [                                      TCGTCGTTCCGCAAGGTGACTCACTGTATCTTCGACATGGACGGGCTGTTGCTTGACACGGAAAATCTTTACACGCAGGTAACGCAATCGATCGCGGAACCGTACGGCAAAACGTACACGTGGGAGATCAAGCAAACGATCATGGGGCTGCAGCGGGACGAAGCGGCCGAAGCGATCGTCGCCGCCCTAGAGCTACCGCTGACACCGGCCGAGTACGTGGAGATATCGACCGAGCGGATCAATCGCGTGATGGAACAGTGTCAGCTAATGCCAGGCGCAGAGCGGCTGGTGCGCCATCTGCACCAACACAACGTGCCGATCGCGCTGGCCACCAGCTCGGGAGCGGATTCGGTCGAGGTGAAGACAAAGAACCACCGCGAGCTGTTCGAGCTGTTCGGGCACAAGGTGATGGGTTCGTCCGATCCCGACGTGAAGGAGGGTAAGCCGGCACCGGACATCTTTCTGGTCGCCGCGGACCGCTTCCCGGACCGGCCCGCTCCCGACCAGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BX606472             [                                            TTCCGCAAGGTGACTCACTGTATCTTCTACATGTACGGGCTGTTGCTTGACACGGAAAATCTTTACACGCAGGTAACGCAATCGATCGCGGAACCGTACGGCAAAACGTACACGTGGGAGATCAAGCAAACGATCATGGGGCTGCAGCGGGACGAAGCGGCCGAAGCGATCGTCGCCGCCCTAGAGCTACCGCTGACACCGGCCGAGTACGTGGAGATATCGACCGAGCGGATCAATCGCGTGATGGAACAGTGTCAGCTAATGCCAGGCGCAGAGCGGCTGGTGCGCCATCTGCACCAACACAACGTGCCGATCGCGCTGGCCACCAGCTCGGGAGCGGATTCGGTCGAGGTGAAGACAAAGAACCACCGCGAGCTGTTCGAGCTGTTCGGGCACAAGGTGATGGGTTCGTCCGATCCCGACGTG GTGAGGGTAAGCCGGCACCGGACATCTTTCTGGTCGCCGCGGACCGCTTCCCGGACCGGCCCGCTCCCGACCAGTGCCTGGTGTTTGAGGATGCGCCGAACGGTGTGACGGCAGCGATTGCGGCCGGCATGCAGGCCGTCATGGTGCCCGATCCACACATCGAGGAGGACCAGCGGAAGCACGCGACGGTCGTGCTGAAATCACTCGAGGACTTCCACCCGGAACAGTTCGGTTTGCCGCCGTTTACGTCGTGAACCACGCGTGGGACGCTTTTGACGACTACCCCGGTGCCGGCCATTACT CCCCG    AAAAAAA       GCTTATAACTACTACTACCACTACTACTACTACTACAACTGCAAGCCG AACGTAGTGTGTGTGTGTGCGGCACACGTCCGATTTTAGCAGAACAGTGTTCTAAACACAGCACCACCGGTTGGga                                                                                                                                                                                                                                                ]
[+] EMBL CNS09BJG             [                                                                                                                             TCGATCGCGGAACCGTACGGCAAAACGTACACGTGGGAGATCAAGCAAACGATCATGGGGCTGCAGCGGGACGAAGCGGCCGAAGCGATCGTCGCCGCCCTCGAGCTACCGCTGACACCGGCCGAGTACGTGCAGATATCGACCGAGCGGATCAATCGCGTGATGGAACAGTGTCAGCTAATGCCAGGTGCAGAGCGGCTGGTGCGCCATCTGCACCAACACAACGTGCCGATCGCGCTGGCCACCAGCTCGGGAGCGGATTCGGTCGAGGTGAAGACAAAGAACCACCGCGAGCTGTTCGAGCTGTTCGGGCACAAGGTGATGGGTTCGTCCGATCCCGACGTGAAGGAGGGTAAGCCGGCGCCCGATATCTTCCTGGTCGCAGCGGACCGCTTCCCGGACCGGCCCGCTCCCGACCAGTGCCTGGTGTTTGAGGATGCGCCGAACGGTGTGACGGCAGCGATTGCGGCCGGCATGCAGGCCGTCATGGTGCCCGATCCGCACATCGAGGAGGACCAGCGGAAGCACGCGACGGTCGTGCTGAAATCACTCGAGGACTTCCATCCGGAACAGTTCGGTTTGCCGCCGTTTACGTCGTGAACCACTCGTGGGACGCTTTTGACGACTATCCTGGAGCCGGCCATTACT CCCCG    AAAAAAA           AAAAATGCT  TACAACTACTACCACTA                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BX615973             [                                                                                                                                                                                                                 GCGATCGTCGCCGCCCTCGAGCTACCGCTGACACCGGCCGAGTACGTGGAGATATCGACCGAGCGGATCAATCGCGTGATGGAACAGTGTCAGCTAATGCCAGGCGCAGAGCGGCTGGTGCGCCATCTGCACCAACACAACGTGCCGATCGCGCTGGCCACCAGCTCGGGAGCGGATTCGGTCGAGGTGAAGACAAAGAACCACCGCGAGCTGTTCGAGCTGTTCGGGCACAAGGTGATGGGTTCGTCCGATCCCGACGTGAAGGAGGGTAAGCCGGCGCCCGATATCTTCCTGGTCGCAGCGGACCGCTTCCCGGACCGGCCCGCTCCCGACCAGTGCCTGGTGTTTGAGGATGCGCCGAACGGTGTGACGGCCGCGATTGCGGCCGGCATGCAGGCCGTCATGGTGCCCGATCCGCACATCGAGGAGGACCAGCGGAAGCACGCGACGGTCGTGCTGAAATCACTCGAGGACTTCCACCCGGAACAGTTCGGTTTGCCGCCGTTTACGTCGTGAACCACGCGTGGGACGCTTTTGACGACTACCCCGCAGCCGGCCATTACT CCCCG    AAAAAAA       GCTTATAACTACTACTACCACTACTACTACTACTACAACTGCAAGCCGTAACGTAGTGTGTGTGTGTGCGGCACACGTCCGATTTTAGCAGAGCAGTGTTCTAAACAC                                                                                                                                                                                                                                                                 ]
[+] EMBL AGA284670            [                                                                                                                                                                                                                                                     GCCGAGTACGTGGAGATATCGACCGAGCGGATCAATCGCGTGATGGAACAGTGTCAGCTAATGCCAGGCGCAGAGCGGCTGGTGCGCCATCTGCACCAACACAACGTGCCGATCGCGCTGGCCACCAGCTCGGGAGCGGATTCGGTCGAGGTGAAGACAAAGAACCACCGCGAGCTGTTCGAGCTGTTCGGGCACAAGGTGATGGGTTCGTCCGATCCCGACGTGAAGGAGGGTAAGCCGGCGCCCGATATCTTCCTGGTCGCAGCGGACCGCTTCCCGGACCGGCCCGCTCCCGACCAGTGCCTGGTGTTTGAGGATGCGCCGAACGGTGTGACGGCCGCGATTGCGGCCGGCATGCAGGCCGTCATGGTGCCCGATCCGCACATCGAGGAGGACCAGCGGAAGCACGCGACGGTCGTGCTGAAATCACTCGAGGACTTCCACCCGGAACAGTTCGGTTTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BX618453             [                                                                                                                                                                                                                                                                      ATCGACCGAGCGGATCAATCGCGTGATGGAACAGTGTCAGCTAATGCCAGGCGCAGAGCGGCTGGTGCGCCATCTGCACCAACACAACGTGCCGATCGCGCTGGCCACCAGCTCGGGAGCGGATTCGGTCGAGGTGAAGACAAAGAACCACCGCGAGCTGTTCGAGCTGTTCGGGCACAAGGTGATGGGTTCGTCCGATCCCGACGTGAAGGAGGGTAAGCCGGCGCCCGATATCTTCCTGGTCGCAGCGGACCGCTTCCCGGACCGGCCCGCTCCCGACCAGTGCCTGGTGTTTGAGGATGCGCCGAACGGTGTGACGGCCGCGATTGCGGCCGGCATGCAGGCCGTCATGGTGCCCGATCCGCACATCGAGGAGGACCAGCGGAAGCACGCGACGGTCGTGCTGAAATCACTCGAGGACTTCCACCCGGAACAGTTCGGTTTGCCGCCGTTTACGTCGTGAACCACGCGTGGGACGCTTTTGACGACTACCCCGCAGCCGGCCATTACT CCCCG    AAAAAAA       GCTTATAACTACTACTACCACTACTACTACTACTA                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BM655468             [                                                                                                                                                                                                                                                                                        cCGCGTGATGGAACAGTGTCAGCTAATGCCAGGCGCAGAGCGGCTGGTGCGCCATCTGCACCAACACAACGTGCCGATCGCGCTGGCCACCAGCTCGGGAGCGGATTCGGTCGAGGTGAAGACAAAGAACCACCGCGAGCTGTTCGAGCTGTTCGGGCACAAGGTGATGGGTTCGTCCGATCCCGACGTGAAGGAGGGTAAGCCGGCGCCCGATATCTTCCTGGTCGCAGCGGACCGCTTCCCGGACCGGCCCGCTCCCGACCAGTGCCTGGTGTTTGAGGATGCGCCGAACGGTGTGACGGCCGCGATTGCGGCCGGCATGCAGGCCGTCATGGTGCCCGATCCGCACATCGAGGAGGACCAGCGGAAGCACGCGACGGTCGTGCTGAAATCACTCGAGGACTTCCACCCGGAACAGTTCGGTTTGCCGCCGTTTACGTCGTGAACCACGCGTGGGACGCTTTTGACGACTACCCCGCAGCCGGCCATTACT CCCCG    AAAAAAA       GCTTATAACTACTACTACCACTACTACTACTACTACAACTGCAAGCCGTAACGTAGTGTGTGTGTGTGCGGCACACGTCCGATTTTAGCAGAGCAGTGTTCTAAACACATCACCAAC GTTGGAGCGAAATTTTGATGAAGCGCGCGCCCGCACACGTTTCGTTTGCGTAGAACGCACAAGCGTCCAACCCG CAAAAGGGGTC                                                                                                                                                                 ]
[-] EMBL CNS0991F             [                                                                                                                                                                                                                                                                                                         cgccGCTAATGCAAGGTGCAGAGCGGCTGGTGCGCCATTTGCACCAAAACAACGTGCCGATCGCGCTGGCCACCAGCTCGGGAGCGGATTCGGTCGAGGTGAAGACAAAGAACCACCGCGAGCTGTTCGAGCTGTTCGGGAACAAGGTGATGGGTTCGTCCGATCCCGACGTGAAGGAGGGTAAGCCGGCGCCCGATATCTTCCTGGTCGCAGCGGACCGCTTCCCGGACCGGCCCGCTCCCGACCAGTGCCTGGTGTTTGAGGATGCGCCGAACGGTGTGACGGCAGCGATTGCGGCCGGCATGCAGGCCGTCATGGTGCCCGATCCGCACATCGAGGAGGACCAGCGGAAGCACGCGACGGTCGTGCTGAAATAACTCGAGGACTTCCATCCGGAACAGTTCGGTTTGCCGCCGTTTACGTCGTGAACCACTCGTGGGACGCTTTTGACGACTATCCTGGAGCCGGCCATTACT CCCCGAA  AAAAAAA       AATGCTTACAACTACTACCACTACTACTACTACTACAACCGCATGCCGCAACGTA  GTGTGTGTGTGCGGCACACGTCCGATTTTAGCAGAGCAGTGTTCTAAACACATCACCACC GTTGGAGCGAAATTTTGATGAAGCGTGCGCACGCACACGTTTCGTTTGCGTAGGACGCACAAGCGTCCACCCCG AAAAAAGGGGCCACTGCCGGGTGGGACGGACGTTAGTTTGTATTTAGTTTTATTTTTCGGAAAGCTTTTTCTTTAGGTGCGCGATCGATGTGTATCGCTAGAATGTGAAATCGCTTGATTGAGCGCCCGTCAATGCGAACAAAAAAAGAAAAAAAAAGAAAAT         ]
[-] EMBL CNS096BS             [                                                                                                                                                                                                                                                                                                                                    TGGTGCGCCATCTGCACCAAAAAAACGTGCCGATCGCGCTGGCCACCAGCTCGGGAGCGGATTCGGTCGAGGTGAAGACAAAGAACCACCGCGAGCTGTTCGAGCTGTTCGGGCACAAGGTGATGGGTTCGTCCGATCCCGACGTGAAGGAGGGTAAGCCGGCGCCCGATATCTTCCTGGTCGCAGCGGACCGCTTCCCGGACCGGCCCGCTCCCGACCAGTGCCTGGTGTTTGAGGATGCGCCGAACGGTGTGACGGCAGCGATTGCGGCCGGCATGCAGGCCGTCATGGTGCCCGATCCGCACATCGAGGAGGACCAGCGGAAGCACGCGACGGTCGTGCTGAAATCACTCGAGGACTTCCATCCGGAACAGTTCGGTTTGCCGCCGTTTACGTCGTGAACCACTCGTGGGACGCTTTTGACGACTATCCTGGAGCCGGCCATTACT CCCCGAAAAAAAAAAA       AATGCTTACAACTACTACCACTACTACTACTACTACAACCGCATGCCGCAACGTA  GTGTGTGTGTGCGGCACACGTCCGATTTTAGCAGAGCAGTGTTCTAAACACATCACCACC GTTGGAGCGAAATTTTGATGAAGCGTGCGCACGCACACGTTTCGTTTGCGTAGAACGCACAAGCGTCCACCCCG AAAAAAGGGGCCACTGCCGGGTGGGACGGACGTTAGTTTGTATTTAGTTTTATTTTTCGGAAAGCTTTTTCTTTAGGTGCGCGATCGATGTGTATCGCTAGAATGTGAAATCGCTTGATTGAGCGCCCGTCAATGCGAACAAAAAAAGAAAAAAAAAGAAAAGACAAGGCGG]
[+] EMBL BX617004             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GCCTGGTGTTTGAGGATGCGCCGAACGGTGTGACGGCCGCGATTGCGGCCGGCATGCAGGCCGTCATGGTGCCCGATCCGCACATCGAGGAGGACCAGCGGAAGCACGCGACGGTCGTGCTGAAATCACTCGAGGACTTCCACCCGGAACAGTTCGGTTTGCCGCCGTTTACGTCGTGAACCACGCGTGGGACGCTTTTGACGACTACCCCGCAGCCGGCCATTACT CCCCG    AAAAAAA       GCTTATAACTACTACTACCACTACTACTACTACTACAACTGCAAGCCGTAACGTAGTGTGTGTGTGTGCGGCACACGTCCGATTTTAGCAGAGCAGTGTTCTAAACACATCACCAAC GTTGGAGCGAAATTTTGATGAAGCGCGCGCCCGCACACGTTTCGTTTGCGTAGAACGCACAAGCGTCCAACCCG CAAAAGGGGTCCACTGCCGGGTGGGAGGGACGTTAGTTTGTATTTAGTTTTATTTCTCGGAAAGCTTTTTCTTTAGGTGCGCGATCGAGGTGTATCGCTAGAATGTGAAATCGCTTGAATGAGCGCCCGT                                          ]
[+] EMBL BX616916             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CGGCCGCGATTGCGGCCGGCATGCAGGCCGTCATGGTGCCCGATCCGCACATCGAGGAGGACCAGCGGAAGCACGCGACGGTCGTTCTGAAATCACTCGAGGACTTCCACCCGGAACAGTTCGGTTTGCCGCCGTTTACGTCGTGAACCACGCTTGGGACGCTTTTGACGACTACCCCGCAGCCGGCCATTACT CCCCG    AAAAAAA       GCTTATAACTACTACTACCACTACTACTACTACTACAACTGCAAGCCGTAACGTAGTGTGTGTGTGTGCGGCACACGTCCGATTTTAGCAGAGCAGTGTTCTAAACACATCACCAAC GTTGGAGCGAAATTTTGATGAAGCGCGCGCCCGCACACGTTTCGTTTGCGTAGAACGCACAAGCGTCCAACCCG CAAAAGGGGTCCACTGCCGGGTGGGAGGGACGTTAGTTTGTATTTAGTTTTATTTCTCGGAAAGCTTTTTCTTTAGGTGCGCGATCGAGGTGTATCGCTAGAATGTGAAATCGCTTGAATGAGCGCCCGT                                          ]
[+] EMBL BM643353             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ccGCAGCGATTGCGGCCGGCATGCAGGCCGTCATGGTGCCCGATCCACACATCGAGGAGGACCAGCGGAAGCACGCGACGGTCGTGCTGAAATCACTCGAGGACTTCCACCCGGAACAGTTCGGTTTGCCGCCGTTTACGTCGTGAACCACGCGTGGGACGCTTTTGACGACTACCCCGGTGCCGGCCATTACT CCCCG    AAAAAAA       GCTTATAACTACTACTACCACTACTACTACTACTACAACTGCAAGCCG AACGTAGTGTGTGTGTGTGCGGCACACGTCCGATTTTAGCAGAACAGTGTTCTAAACACAGCACCACC GTTGGAGCAAAATTTTGATGATGCGCGCGCCCGCACACGTTTCGTTTGCGTAGAACGCACAAGCGTCCAACCCGAAAAAAGGGGTCCGCTGCCGGGTGGGACGGACGTTAGTTTGTATTTAGTTTTATTTCTCGGAAAGCTTTTTCTTTAGGTGCGCGATCGATGTGTATCGCTAGAATGTGAAATCGCTTGATTGAGCGCCCGTCAATGCGAACAAAc                            ]


>consensus_9643#0 CCGGTGGTTCGGTGCTCGGTACGGCCGGAAGCAAAATGTCGTCGTTCCGCAAGGTGACTC ACTGTATCTTCGACATGGACGGGCTGTTGCTTGACACGGAAAATCTTTACACGCAGGTAA CGCAATCGATCGCGGAACCGTACGGCAAAACGTACACGTGGGAGATCAAGCAAACGATCA TGGGGCTGCAGCGGGACGAAGCGGCCGAAGCGATCGTCGCCGCCCTCGAGCTACCGCTGA CACCGGCCGAGTACGTGGAGATATCGACCGAGCGGATCAATCGCGTGATGGAACAGTGTC AGCTAATGCCAGGCGCAGAGCGGCTGGTGCGCCATCTGCACCAACACAACGTGCCGATCG CGCTGGCCACCAGCTCGGGAGCGGATTCGGTCGAGGTGAAGACAAAGAACCACCGCGAGC TGTTCGAGCTGTTCGGGCACAAGGTGATGGGTTCGTCCGATCCCGACGTGAAGGAGGGTA AGCCGGCGCCCGATATCTTCCTGGTCGCAGCGGACCGCTTCCCGGACCGGCCCGCTCCCG ACCAGTGCCTGGTGTTTGAGGATGCGCCGAACGGTGTGACGGCAGCGATTGCGGCCGGCA TGCAGGCCGTCATGGTGCCCGATCCGCACATCGAGGAGGACCAGCGGAAGCACGCGACGG TCGTGCTGAAATCACTCGAGGACTTCCACCCGGAACAGTTCGGTTTGCCGCCGTTTACGT CGTGAACCACGCGTGGGACGCTTTTGACGACTACCCCGGAGCCGGCCATTACTCCCCGAA AAAAAGCTTATAACTACTACTACCACTACTACTACTACTACAACTGCAAGCCGTAACGTA GTGTGTGTGTGTGCGGCACACGTCCGATTTTAGCAGAGCAGTGTTCTAAACACATCACCA CCGTTGGAGCGAAATTTTGATGAAGCGCGCGCCCGCACACGTTTCGTTTGCGTAGAACGC ACAAGCGTCCAACCCGCAAAAGGGGTCCACTGCCGGGTGGGACGGACGTTAGTTTGTATT TAGTTTTATTTCTCGGAAAGCTTTTTCTTTAGGTGCGCGATCGATGTGTATCGCTAGAAT GTGAAATCGCTTGATTGAGCGCCCGTCAATGCGAACAAAAAAAGAAAAAAAAAGAAAATA CAAGGCGG



consensusID : consensus_9643#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 268
fasta sequence
                              [TTTTTTTTTGGTTCTAGTAACGCTTTAGCAGTTTAAATTTATTGTTTTTTTACTTTTATATCATTAATCCTTACCAACTAAACAGAACATTTTGGAGGGAGAAAACTAGCCAAAAATGAACAAATTAATCCACTAGGCGTAATCGGGAATTCGGACAACCACACAATTGCGCGTATTCCATGGCAATATTTTAAATTGTATCAGTTTCTCTATCCAATAGCTCTCGCTAGTAATAAATTATCGAAAGTGAACAAAACTATAAAAAAAA]

[-] EMBL AGA283624            [TTTTTTTTTGGTTCTAGTAACGCTTTAGCAGTTTAAATTTATTGTTTTTTTACTTTTATATCATTAATCCTTACCAACTAAACAGAACATTTTGGAGGGAGAAAACTAGCCAAAAATGAACAAATTAATCCACTAGGCGTAATCGGGAATTCGGACAACCACACAATTGCGCGTATTCCATGGCAATATTTTAAATTGTATCAGTTTCTCTATCCAATAGCTCTCGCTAGTAATAAATTATCGAAAGTGAACAAAACTATAAAAAA  ]
[+] EMBL AGA284914            [          GTTCTAGTAACGCTTTAGCAGTTTAAATTTATTGTTTTTTTACTTTTATATCATTAATCCTTACCAACTAAACAGAACATTTTGGAGGGAGAAAACTAGCCAAAAATGAACAAATTAATCCACTAGGCGTAATCGGGAATTCGGACAACCACACAATTGCGCGTATTCCATGGCAATATTTTAAATTGTATCAGTTTCTCTATCCAATAGCTCTCGCTAGTAATAAATTATCGAAAGTGAACAAAACTATAAAAAAAA]


>consensus_9643#1 TTTTTTTTTGGTTCTAGTAACGCTTTAGCAGTTTAAATTTATTGTTTTTTTACTTTTATA TCATTAATCCTTACCAACTAAACAGAACATTTTGGAGGGAGAAAACTAGCCAAAAATGAA CAAATTAATCCACTAGGCGTAATCGGGAATTCGGACAACCACACAATTGCGCGTATTCCA TGGCAATATTTTAAATTGTATCAGTTTCTCTATCCAATAGCTCTCGCTAGTAATAAATTA TCGAAAGTGAACAAAACTATAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9643#0      CCGGTGGTTCGGTGCTCGGTACGGCCGGAAGCAAAATGTCGTCGTTCCGCAAGGTGACTC 60
consensus_9643#1      ------------------------------------------------------------
                                                                                  

consensus_9643#0      ACTGTATCTTCGACATGGACGGGCTGTTGCTTGACACGGAAAATCTTTACACGCAGGTAA 120
consensus_9643#1      ------------------------------------------------------------
                                                                                  

consensus_9643#0      CGCAATCGATCGCGGAACCGTACGGCAAAACGTACACGTGGGAGATCAAGCAAACGATCA 180
consensus_9643#1      ------------------------------------------------------------
                                                                                  

consensus_9643#0      TGGGGCTGCAGCGGGACGAAGCGGCCGAAGCGATCGTCGCCGCCCTCGAGCTACCGCTGA 240
consensus_9643#1      ------------------------------------------------------------
                                                                                  

consensus_9643#0      CACCGGCCGAGTACGTGGAGATATCGACCGAGCGGATCAATCGCGTGATGGAACAGTGTC 300
consensus_9643#1      ------------------------------------------------------------
                                                                                  

consensus_9643#0      AGCTAATGCCAGGCGCAGAGCGGCTGGTGCGCCATCTGCACCAACACAACGTGCCGATCG 360
consensus_9643#1      ------------------------------------------------------------
                                                                                  

consensus_9643#0      CGCTGGCCACCAGCTCGGGAGCGGATTCGGTCGAGGTGAAGACAAAGAACCACCGCGAGC 420
consensus_9643#1      ------------------------------------------------------------
                                                                                  

consensus_9643#0      TGTTCGAGCTGTTCGGGCACAAGGTGATGGGTTCGTCCGATCCCGACGTGAAGGAGGGTA 480
consensus_9643#1      ------------------------------------------------------------
                                                                                  

consensus_9643#0      AGCCGGCGCCCGATATCTTCCTGGTCGCAGCGGACCGCTTCCCGGACCGGCCCGCTCCCG 540
consensus_9643#1      ------------------------------------------------------------
                                                                                  

consensus_9643#0      ACCAGTGCCTGGTGTTTGAGGATGCGCCGAACGGTGTGACGGCAGCGATTGCGGCCGGCA 600
consensus_9643#1      ------------------------------------------------------------
                                                                                  

consensus_9643#0      TGCAGGCCGTCATGGTGCCCGATCCGCACATCGAGGAGGACCAGCGGAAGCACGCGACGG 660
consensus_9643#1      ------------------------------------------------------------
                                                                                  

consensus_9643#0      TCGTGCTGAAATCACTCGAGGACTTCCACCCGGAACAGTTCGGTTTGCCGCCGTTTACGT 720
consensus_9643#1      ------------------------------------------------------------
                                                                                  

consensus_9643#0      CGTGAACCACGCGTGGGACGCTTTTGACGACTACCCCGGAGCCGGCCATTACTCCCCGAA 780
consensus_9643#1      ------------------------------------------------------------
                                                                                  

consensus_9643#0      AAAAAGCTTATAACTACTACTACCACTACTACTACTACTACAACTGCAAGCCGTAACGTA 840
consensus_9643#1      ------------------------------------------------------------
                                                                                  

consensus_9643#0      GTGTGTGTGTGTGCGGCACACGTCCGATTTTAGCAGAGCAGTGTTCTAAACACATCACCA 900
consensus_9643#1      -----TTTTTTTTTGGTTCTAGTAACGCTTTAGCAGTTTAAATTTATTGTTTTTTTACTT 55
                           * * * *  **  *  **     ********   *   ** *       * **  

consensus_9643#0      CCGTTGGAGCGAAATTTTGATGAAGCGCGCGCCCGCACACGTTTCGTTTGCGTAGAACGC 960
consensus_9643#1      TTATATCATT--AATCCTTACCAACTAAACA-----GAACATTTTGGAGGGAGAAAACTA 108
                         *   *    ***  * *  **     *        ** *** *   *   * ***  

consensus_9643#0      ACAAGCGTCCAACCCGCAAAAGGGGTCCACTGCCGGGTGGGACGGACGTTAGTTTGT-AT 1019
consensus_9643#1      GCCAAAAATGAAC-----AAATTAATCCACTAG-GCGTAATCGGGAATTCGGACAACCAC 162
                       * *      ***     ***    ******   * **     ***  *  *      * 

consensus_9643#0      TTAGTTTTATTTCTCGGAAAGCTTTTTCTTTAGGTGCGCGATCGATGTGTATCGCTAGAA 1079
consensus_9643#1      ACAATTGCGCGTATTCCATGGCAATATTTTAAATTGT---ATCAGTTTCTCTATCCAATA 219
                        * **     * *   *  **  * * ** *  **    ***  * * * *  * *  *

consensus_9643#0      TGTGAAATCGCTTG-ATTGAGCGCCCGTCAATGCGAACAAAAAAAGAAAAAAAAAGAAAA 1138
consensus_9643#1      GCT---CTCGCTAGTAATAAATTATCG--AAAGTGAACAAAACTATAAAAAAAA------ 268
                        *    ***** * * * *     **  ** * ********  * ********      

consensus_9643#0      TACAAGGCGG 1148
consensus_9643#1      ----------
                                




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)