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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9650#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 16 consensus length = 1797 fasta sequence
[CCGCGGACGCGTGGGCGCCCACCACCCCCCGGCACACTGTGTTATTCAACAAGCACGTTGCGCAAACCAACACTCCCCACAGAAACCCGTTCCGTGGAGGGGATAAAAGCGTATTGGAG-AAAAAAAACCCGTTTCGTGTGCCGCATCCACACAGCACAGCATTGAACCTGACGGTGGTGAAAATGTTTGATTTCCATTCGTAAAGTTCACTTGCGCGAGAAAGCACGCTGACGTGTTGCGGACCTGTCATCTGGTAGCGGCGTTTTCCTCGTTTATTTTACCCTGCCAGTTATCGTGTGCTTTGTGCAACCCTTTGCTTATCGGTGCATTTATCGAATCGCAGTTCGCGAGATTCGACAG-TTTTTGA-T-AAAACGCATAACTTAACGGTGTGTTAAATTACACTACGCGCG-GAGCTCGATTCAAAATGACGTCATCAGGAGAAGTTTTCATCGTGTCGGCCGCCAGAACCCCGATCGGTAATTTCATGGGCACACTCGCGTCGCTTAGTGCCGCCGATCTTGGAGCGGTGGCCGTGAAAGAAGTGCTACAGCGAGCCAGCGTCGATCCGGCCGATGTGAGCGAGGTCATTCTCGGCCAAGCCCTAACGGCCGGCCA-GGGACAGAACCCGGCCCGCCAGGCTTCCATTAAAGCGGGCGTACCGAAGGAAGTCCCAGCGTACAACATCAACATGCTGTGCGGCTCCGGTCTGAAAACGGTTGCCCTCGGCTATCAGGCGATCCGGGCCGGTGATGCTACCGTCGTCGTCGCTGGCGGACAAGAGTCCATGTCCAAGGCACCGCATGTGATGCATA-TGCGCAGTGGCACCAAAATGGGCGAGGCCAAGATGGTCGATTCGATGCTGAACGACGGCCTGACGGATGCGTTCTACGATCTGCACATGGGCATTACGGCGGAA--AATCT-AGCCAAAG-AGTTCGACATTGGCCG-AGAGGCGCAG-GATGCATTCGCCGCCAAGAGCCAACAGCTGGCTGAAGAATCTCAACAGAAAGGATACTTTACCGAGGAGATCGTACCGGTGGAGGTGGCGGGCCGCAAGGAAACGATCAAGTTTGCGGTGGACGAGTACCCGAAGCATGGTACCACGGCGGAAGGGCTGGCCAAGCTACGGCCGTGCTTCATTAAGGACGGTACCGTTACGCCCGGTAACGCGTCCGGTATTAACGATTCTGCCGCCGCCGTTCTGCTGATGTCCGGCGAGGAGGTCCAAAAACGAAACGCCAAACCGATGGCAAAGATCGTTGCCTACGCGCAAACGGGAATATGCCCGAAAACGATGGGCGCTGGCCCGATCTCGGCCGTACAGGCTGTGCTTCAAAAAGCCGGCTGGAAGCTGGAAGAGGTCGATCTGTTTGAGCTGAACGAGGCATTCGCAGCCCAGGCACTGGCCGTCAACAAGGGTCTTGGTGTGGACCCGGCCAAGGTTAACGTTGGCGGAGGTGCCATCGCTCTCGGACATCCCATTGGAGCTTCGGGCTGCCGAGTACTGGTTACGCTGCTCTACGCACTCAAGCGAACAGGCGGCAAGAAGGGTGTTGCATCCTTGTGCGTTGGCGGCGGTATGGGTGTCGCCATGGCGGTGGAAATGGTGTGAAGACGCTTTTATGGAACAGTTTTGTACTTACGCTTACCGAATGATATGTATTTTTCGTACTCAATTGTATTTTTTCTTCTTTCTATGAAGAGTATTCAGTGTAAGGCAACTGCTGCCGTACCCTACAGCATCATAAATCGCAAGTGACTATGGCAATAAACGTATAATTCTCTTAAAATTCCTGCACT]
[+] EMBL BM588029 [CCGCGGACGCGTGGGCGCCCACCACCCCCCGGCACACTGTGTTATTCAACAAGCACGTTGCGCAAACCAACACTCCCCACAGAAACCCGTTCCGTGGAGGGGATAAAAGCGTATTGGAG AAAAAAAACCCGTTTCGTGTGCCGCATCCACACAGCACAGCATTGAACCTGACGGTGGTGAAAATGTTTGATTTCCATTCGTAAAGTTCACTTGCGCGAGAAAGCACGCTGACGTGTTGCGGTCCTGTCATCTGGTAGCGGCGTTTTCCTCGTTTATTTTACCCTGCCAGTTACCGTGTGCTTTGTGCAACCCTTTGCTTATCGGTGCATTTATCGAATCGCAGTTCGCGAGATTCGACAG TTTTTGA T AAAACGCATAACTTAACGGTGTGTTAAATTACACTACGCGCG GAGCTCGATTCAAAATGACGTCATCAGGAGAAGTTTTCATCGTGTCGGCCGCCAGAACCCCGATCGGTAATTTCATGGGCACACTCGCGTCGCTTAGTGCCGCCGATCTTGGAGCGGTGGCCGTGAAAGAAGTGCTACAGCGAGCCAGCGTCGATCCGGCCGATGTGAGCGAGGTCATTCTCGGGCAAGCCCTAACGGCCGGCCAGGGGACAGAACCC ]
[+] EMBL BM613120 [ ccgcaaCGCCCACCACCCCCCGGCACACTGTGTTATTCAACAAGCACGTTGCGCAAACCAACACTCCCCACAGGAACCCGTTCCGTGGAGGGGATAAAAGCGTATTGGAG AAAAAAAACCCGTTTCGTGTGCCGCATCCACACAGCACAGCATTGAACCTGACGGTGGTGAAAATGTTTGATTTCCATTCGTAAAGTTCACTTGCGCGAGAAAGCACGCTGACGTGTTGCGGACCTGTCATCTGGTAGCGGCGTTTTCCTCGTTTATTTTACCCTGCCAGTTATCGTGTGCTTTGTGCAACCCTTTGCTTATCGGTGCATTTATCGAATCGCAGTTCGCGAGATTCGACAG TTTTTGA T AAAACGCATAACTTAACGGTGTGTTAAATTACACTACGCGCG GAGCTCGATTCAAAATGACGTCATCAGGAGAAGTTTTCATCGTGTCGGCCGCCAGAACCCCGATCGGTAATTTCATGGGCACACTCGCGTCGCTTAGTGCCGCCGATCTTGGTGCGGTGGCCGTGAAAGAAGTGCTGCAGCGAGCCAGCGTCGATCCGGCCGATGTGAGCGAGGTCATTCTCGGCCAAGCCCTAACGGCCGGCCA GG ]
[+] EMBL BM614361 [ ccgACGTTGCGCAAACCAACACTCCCCACAGAAACCCGTTCCGTGGAGGGGATAAAAGCGTATTGGAGAAAAAAAAACCCGTTTCGTGTGCCGCATCCACAAAGCACAGCATTGAACCTGACGGTGGTGAAAATGTTTGATTTCCATTCGTAAAGTTCACTTGCGCGAGAAAGCACGCTGACGTGTTGCGGACCTGTCATCTGGTAGCGGCGTTTTCCTCTTTTATTTTACCCTACCAGTTATCGTGTGCTTTGTGCAATCCTTTGCTTATCGGTGCATTTATCGAATCGCAGTTGGCGAGATTCGACAG TTTTTGATT AAAACACATAACTTAACGGTGTGTTATATTACACTACGCGCG AAGCCTGATTCAAAATGACGTCAGCAGGAGAAGTTTTCATCGTGTCGGCCGCCAGAACCCCGATCGGTAATTTCATGGGCACACTCGCGTCGCTTAGTGCCGCCGATCTTGGAGCGGTGGCCGTGAAAGAAGTGCTACAGCGAGCCAACGTCGATCCGGCCGATGTGAGCGAGGTCATTCTCGGCCAAGCCCTAACGGCCGGCCA GGGACAGAACCCGGCCCGCCAGGCTTCCATTAAAGCGGG ]
[+] EMBL BM607940 [ CCGGTTCCGTGGAGGGGATAAAAGCGTATTGGAG AAAAAAAACCCGTTTCGTGTGCCGCATCCACACAGCACAGCATTGAACCTGACGGTGGTGAAAATGTTTGATTTCCATTCGTAAAGTTCACTTGCGCGAGAAAGCACGCTGACGTGTTGCGGTCCTGTCATCTGGTAGCGGCGTTTTCCTCGTTTATTTTACCCTGCCAGTTACCGTGTGCTTTGTGCAACCCTTTGCTTATCGGTGCATTTATCGAATCGCAGTTCGCGAGATTCGACAG TTTTTGA T AAAACGCATAACTTAACGGTGTGTTAAATTACACTACGCGCG GAGCTCGATTCAAAATGACGTCATCAGGAGAAGTTTTCATCGTGTCGGCCGCCAGAACCCCGATCGGTAATTTCATGGGCACACTCGCGTCGCTTAGTGCCGCCGATCTTGGAGCGGTGGCCGTGAAAGAAGTGCTACAGCGAGCCAGCGTCGATCCGGCCGATGTGAGCGAGGTCATTCTCGGCCAAGCCCTAACGGCCGGCCA GGGACAGAACCCGGCCCGCCAGGCTTCCATTAAAGCGGGCGTACCGAAGGAAGTCCCAGCGTACAACATCAACA ]
[+] EMBL BM594883 [ cCGCGAGAAAGCACGCTGACGTGTTGCGGACCTGTCATCTGGTAGCGGCGTTTTCCTCGTTTATTTTACCCTGCCAGTTATCGTGTGCTTTGTGCAACCCTTTGCTTATCGGTGCATTTATCGAATCGCAGTTCGCGAGATTCGACAG TTTTTGA T AAAACGCATAACTTAACGGTGTGTTAAATTACACTACGCGCG GAGCTCGATTCAAAATGACGTCATCAGGAGAAGTTTTCATCGTGTCGGCCGCCAGAACCCCGATCGGTAATTTCATGGGCACACTCGCGTCGCTTAGTGCCGCCGATCTTGGTGCGGTGGCCGTGAAAGAAGTGCTGCAGCGAGCCAGCGTCGATCCGGCCGATGTGAGCGAGGTCATTCTCGGCCAAGCCCTAACGGCCGGCCA GGGACAGAACCCGGCCCGCCAGGCTTCCATTAAAGCGGGCGTACCGAAGGAAGTCCCAGCGTACAACATCAACATGCTGTGCGGCTCCGGTCTGAAAACGGTTGCCCTCGGCTATCAGGCGATCCGGGCCGGTGATGCTACCGTCGTCGTCGCTGGCGGACAAGAGTCCATGTCCAAGGCACCGCATGTGATGCATA TGCGCAGTGGCACCAAAATGGGCGAGGCCAAGATGGTCGATTCGATGCTGAACGACGG ]
[+] EMBL BX626364 [ GCTGACGTGTTGCGGACCTGTCATCTGGTAGCGGCGTTTTCCTCTTTTATTTTACCCTACCAGTTATCGTGTGCTTTGTGCAACCCTTTGCTTATCGGTGCATTTATCGAATCGCAGTTGGCGAGATTCGACAG TTTTTGA T AAAACGCATAACTTAACGGTGTGTTAAATTACACTACGCGCGAAAGCTCGATTCAAAATGACGTCAGCAGGAGAAGTTTTCATCGTGTCGGCCGCCAGAACCCCGATCGGTAATTTCATGGGCACACTCGCGTCGCTTAGTGCCGCCGATCTTGGTGCGGTGGCCGTGAAAGAGGTGCTGCAGCGAGCCAGCGTCGATCCGGCCGATGTGAGCGAGGTCATTCTCGGCCAAGCCCTAACGGCCGGCCA GGGACAGAACCCGGCCCGCCAGGCTTCCATTAAAGCGGGCGTACCGAAGGAAGTCCCAGCGTACAACATCAACATGCTGTGCGGCTCCGGTCTGAAAACGGTTGCCCTCGGCTATCAGGCGATCCGGGCCGGTGATGCTACCGTCGTCGTCGCTGGCGGACAAGAGTCCATGTCCAAGGCACCGCATGTGATGCATA TGCGCAGTGGCACCAAAATGGGCGAGGCCAAGATGGTCGATTCGATGCTGAACGACGGCCTGACGGATGCGTTCTACGATCTGCACATGGGCATTACNGCGGAA AATCT AGCCAAAG AGT ]
[+] EMBL BM582772 [ CCGGTCATCTGGTAGCGGCGTTTTCCTCGTTTATTTTACCCTGCCAGTTACCGTGTGCTTTGTGCAACCCTTTGCTTATCGGTGCATTTATCGAATCGCAGTTCGCGAGATTCGACAG TTTTTGA T AAAACGCATAACTTAACGGTGTGTTAAATTACACTACGCGCG GAGCTCGATTCAAAATGACGTCATCAGGAGAAGTTTTCATCGTGTCGGCCGCCAGAACCCCGATCGGTAATTTCATGGGCACACTCGCGTCGCTTAGTGCCGCCGATCTTGGAGCGGTGGCCGTGAAAGAAGTGCTACAGCGAGCCAGCGTCGATCCGGCCGATGTGAGCGAGGTCATTCTCGGCCAAGCCCTAACGGCCGGCCA GGGACAGAACCCGGCCCGCCAGGCTTCCATTAAAGCGGGCGTACCGAAGGAAGTCCCAGCGTACAACATCAACATGCTGTGCGGCTCCGGTCTGAAAACGGTTGCCCTCGGCTATCAGGCGATCCGGGCCGGTGATGCTACCGTCGTCGTCGCGGGCGGACAAGAGTCCATGTCCAAGGCACCGCATGTGATGCATA TGCGCAGTGGCACCAAAATGGGCGAGGCCAAGATGGTCGATTCGATGCTGAACGACGGCCTGACGGATGCGTTCTACGATCTGCACATGGGCATTACGGCGGAA AA ]
[+] EMBL BX625044 [ GCAGTTCGCGAGATTCGACAGTTTTTTGA TAAAAACACATAACTTAACGGTGTGTTAAATTACACTACGCGCGAAAGCTCGCTTCAAAATGACGTCAGCAGGAGAAGTTTTCATCGTGTCGGCCGCCAGAACCCCGATCGGTAATTTCATGGGTACACTCGCGTCGCTTAGTGCCGCCGATCTTGGTGCGGTGGCCGTGAAAGAGGTGCTGCAGCGAGCCAGCGTCGATCCGGCCGATGTGAGCGAGGTCATTCTCGGCCAAGCCCTAACGGCCGGCCA GGGACAGAACCCGGCCCGCCAGGCTTCCATTAAAGCGGGCGTACCGAAGGAAGTCCCATCGTACAACATCAACATGCTGTGCGGCTCCGGTCTGAAAACGGTTGCCCTCGGCTATCAGGCGATCCGGGCCGGTGATGCTACCGTCGTCGTCGCTGGCGGACAAGAGTCCATGTCCAAGGCACCGCATGTGATGCATA TGCGCAGTGGCACCAAAATGGGCGAGGCCAAGATGATCGATTCGATGCTGAACGATGGTCTGACGGATGCGTTCTACGATCTGCACATGGGCATTACGGCGGAA AATCT AGCCAAAG AGTTCGACATTGGCCG AGANGCACAG GATGCATTCGCCGCCAAGAGCCAACAGCTGGCTGAAGAATCTCAACAGAAAGGATACTTTACTGAGG ]
[+] EMBL AL693056 [ tgcccGACGGTTTCATCGTGTCGGCCGCCAGAA CCCGATCGGTAATTTCATGGGCACACTCGCGTCGCTTAGTGCCGCCGATCTTGGTGCGGTGGCCGTGAAAGAGGTGCTGCAGCGAGCCAGCGTCGATCCGGCCGATGTGAGCGAGGTCATTCTCGGCCAAGCCCTAACGGCCGGCCAGGGGACAGAACCCGGCCCGCCAGGCTTCCATTAAAGCGGGCGTACCGAAGGAAGTCCCAGCGTACAACATCAACATGCTGTGCGGCTCCGGTCTGAAAACGGTTGCCCTCGGCTATCAGGCGATCCGGGCCGGTGATGCTACCGTCGTCGTCGCTGGCGGACAAGAGTCCATGTCCAAGGCACCGCATGTGATGCATATTGCGCAGTGGCACCAAAATGGGCGAGGCCAAGATGGTCGATTCGATGCTGAACGACGGCCTGACGGATGCGTTCTACGATCTGCACATGGGCATTACGGCGGCACCAATCTCAGCCAAAGCAGTTCGACATTGGCCGCACAGGCGCAGCGATGCATTCGCCG CAAGAGCCAACAGCTGGCTGAAGAATCTCAA ]
[+] EMBL BX618515 [ TCGGGTCGGCCGCCAGAACCCCGATCGGTAATTTCATGGGCACACTCGCGTCGCTTAGTGCCGCCGATCTTGGAGCGGTGGCCGTGAAAGAAGTGCTACAGCGAGCCAGCGTCGATCCGGCCGATGTGAGCGAGGTCATTCTCGGCCAAGCCCTAACGGCCGGCCA GGGACAGAACCCGGCCCGCCAGGCTTCCATTAAAGCGGGCGTACCGAAGGAAGTCCCAGCGTACAACATCAACATGCTGTGCGGCTCCGGTCTGAAAACGGTTGCCCTCGGCTATCAGGCGATCCGGGCCGGTGATGCTACCGTCGTCGTCGCGGGCGGACAAGAGTCCATGTCCAAGGCACCGCATGTGATGCATA TGCGCAGTGGCACCAAAATGGGCGAGGCCAAGATGGTCGATTCGATGCTGAACGACGGCCTGACGGATGCGTTCTACGATCTGCACATGGGCATTACGGCGGAA AATCT AGCCAAAG AGTTCGACATTGGCC ]
[+] EMBL BX605788 [ CTACAGCGAGCCAACGTCGATCCGGCCGATGTGAGCGAGGTCATTCTCGGCCAAGCCCTAACGGCCGGCCA GGGACAGAACCCGGCCCGCCAGGCTTCCATTAAAGCGGGCGTACCGAAGGAAGTCCCAGCGTACAACATCAACATGCTGTGCGGCTCCGGTCTGAAAACGGTTGCCCTCGGCTATCAGGCGATCCGGGCCGGTGATGCTACCGTCGTCGTCGCGGGCGGACAAGAGTCCATGTCTAAGGCACCGCATGTGATGCATA TGCGCAGTGGCACCAAAATGGGCGAGGCCAAGATGGTCGATTCGATGCTGAACGATGGTCTGACGGATGCGTTCTACGATCTGCACATGGGCATTACGGCGGAA AATCT AGCCAAAG AGTTCGACATTGGCCG AGAGGCGCAG GATGCATTCGCCGCCAAGAGCCAGCAGCTGGCTGAAGAATCTCAACAGAAAGGATACTTTACCGAGGAGATCGTACCGGTGGAGGTGGCGGGCCGCAAGGAAACGATCAAGTTTGCGGTGGACGAGTACCCGAAGCATGGTACCACGGCGGAAGGGCTGGCCAAGCTACGGCCGTGCTTCATTAAGGACGGTACCGTTACCCCCGGTAACGCGTCCGGTATTAA ]
[+] EMBL BM650555 [ ccGTCTGAAAACGGTTGCCCTCGGCTATCAGGCGATCCGGGCCGGTGATGCTACCGTCGTCGTCGCGGGCGGACAAGAGTCCATGTCCAAGGCACCGCATGTGATGCATA TGCGCAGTGGCACCAAAATGGGCGAGGCCAAGATGGTCGATTCGATGCTGAACGACGGCCTGACGGATGCGTTCTACGATCTGCACATGGGCATTACGGCGGAA AATCT AGCCAAAG AGTTCGACATTGGCCG AGAGGCGCAG GATGCATTCGCCGCCAAGAGCCAACAGCTGGCTGAAGAATCTCAACAGAAAGGATACTTTACCGAGGAGATCGTACCGGTGGAGGTTGCGGGCCGCAAGGAAACGATCAAGTTTGCGGTGGACGAGTACCCGAAGCATGGTACCACGGCGGAAGGGCTGGCCAAGCTGCGGCCGTGCTTCATTAAGGACGGTACCGTTACGCCCGGTAACGCGTCCGGTATTAACGATTCTGCCGCCGCCGT ]
[+] EMBL BX622768 [ GGTACCGTTACGCCCGGTAACGCGTCCGGTATTAACGATTCTGCCGCCGCCGTTCTGCTGATGTCCGGCNAGGAGGTTCANAAg ]
[+] EMBL BX612735 [ GCCCGGTAACGCGTCCGGTATTAACGATTCTGCCGCCGCCGTTCTGCTGATGTCCGGCGAGGAGGTCCAAAAACGAAACGCCAAACCGATGGCAAAGATCGTTGCCTACGCGCAAACGGGAATATGCCCGAAAACGATGGGCGCTGGCCCGATCTCGGCCGTACAGGCTGTGCTTCAAAAAGCCGGCTGGAAGCTGGAAGAGGTCGATCTGTTTGAGCTGAACGAGGCATTCGCAGCCCAGGCACTGGCCGTCAACAAGGGTCTTGGTGTGGACCCGGCCAAGGTTAACGTTGGCGGAGGTGCCATCGCTCTCGGACATCCCATTGGAGCTTCGGGCTGCCGAGTACTGGTTACGCTGCTCTACGCACTCAAGCGAACAGGCGGCAAGAAGGGTGTTGCATCCTTGTGCGTTGGCGGCGGTATGGGTGTCGCCATGGCGGTGGAAATGGTGTGAAGACGCTTTTATGGAACAGTTTTGTACTTACGCTTACCGAATGATATGTATTTTTCGTACTCAATTGTATTTTTTCTTCTTTCTATGAAGAGTATTCAGTGTAAGGCAACTGCTGCCGTACCCTACAGCATCATAAATCGCAAGTGACTATGGCAATAAACGTATAATTCTCTTAAAA ]
[+] EMBL BX609815 [ GCCCGGTAACGCGTCCGGTATTAACGATTCTGCCGCCGCCGTTCTGCTGATGTCCGGCGAGGAGGTCCAAAAACGAAACGCCAAACCGATGGCAAAGATCGTTGCCTACGCGCAAACGGGAATATGCCCGAAAACGATGGGCGCTGGCCCGATCTCGGCCGTACAGGCTGTGCTTCAAAAAGCCGGCTGGAAGCTGGAAGAGGTCGATCTGTTTGAGCTGAACGAGGCATTCGCAGCCCAGGCACTGGCCGTCAACAAGGGTCTTGGTGTGGACCCGGCCAAGGTTAACGTTGGCGGAGGTGCCATCGCTCTCGGACATCCCATTGGAGCTTCGGGCTGCCGAGTACT ]
[+] EMBL BM646707 [ ccgGGAGGAGCCATCGCTCTCGGACATCCCATTGGAGCTTCGGGCTGCCGAGTACTGGTTACGCTGCTCTACGCGCTCAAGCGAACAGGCGGCAAGAAGGGTGTTGCATCCTTGTGCGTTGGCGGCGGTATGGGTGTCGCCATGGCGGTGGAAATGGTGTGAAGACGCTTTTATGGAACAGTTTTGTACTTACGCTTACCGAATGATATGTATTTTTCGTACTCAATTGTATTTTTTCTTCTTTCTATGAAGAGTATTCAGTGTAAGGCAACTGCTGCCGTACCCTACAGCATCATAAATCACAAGTGACGATAGCAATAAACGTATAATTCTCTTAAAATTCCTGCACT]
consensusID : consensus_9650#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 549 fasta sequence
[GCCGAGGCTTAAGAAAGCACGCTGACGTGTTGCGGACCTGTCATCTGGTAGCGGCGTTTTCCTCTTTTATTTTACCCTACCAGTTATCGTGTAGCTTTGTGCAACCCTTTGCTTATACGGTGCATTTATCGAATCGCAGTTGGCGAGATTCGACAGTTTTTTGATAAAACGCATAACTTAACGGTGTGTTAAATTACACTACGCGCGAAAGCTCGATTCAAAATGACGTCAGCAGGAGAAGTTTTCATCGTGTCGGCCGCCAGAACCCCGATCGGTAATTTCATGGGCACACTCGCGTCGCTTAGTGCCGCCGATCTTGGTGCGGTGGCCGTGAAAGAGGTGCTGCAGCGAGCCACGTCGATCCGGCGATGTGAGCGAGGTCATTCTCGGCCAAGGCCTAAGCGGCGGCCAGGGTACAGAACCCTGNGTCCGNNCAGCGCTTCNCATTAAAGCGGGCGTACCGTAAGGAAGTCCCAGCGTACAACNATCAACCATGCTGTGCGGCGTNCCGGTCTGAAAGACGGTTGCCCTCGGCTATCAGNGCGATAC]
[+] EMBL AL934727 [GCCGAGGCTTAAGAAAGCACGCTGACGTGTTGCGGACCTGTCATCTGGTAGCGGCGTTTTCCTCTTTTATTTTACCCTACCAGTTATCGTGTAGCTTTGTGCAACCCTTTGCTTATACGGTGCATTTATCGAATCGCAGTTGGCGAGATTCGACAGTTTTTTGATAAAACGCATAACTTAACGGTGTGTTAAATTACACTACGCGCGAAAGCTCGATTCAAAATGACGTCAGCAGGAGAAGTTTTCATCGTGTCGGCCGCCAGAACCCCGATCGGTAATTTCATGGGCACACTCGCGTCGCTTAGTGCCGCCGATCTTGGTGCGGTGGCCGTGAAAGAGGTGCTGCAGCGAGCCACGTCGATCCGGCGATGTGAGCGAGGTCATTCTCGGCCAAGGCCTAAGCGGCGGCCAGGGTACAGAACCCTGNGTCCGNNCAGCGCTTCNCATTAAAGCGGGCGTACCGTAAGGAAGTCCCAGCGTACAACNATCAACCATGCTGTGCGGCGTNCCGGTCTGAAAGACGGTTGCCCTCGGCTATCAGNGCGATAC]
consensusID : consensus_9650#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 530 fasta sequence
[GAATCGCACGAGGTTAAAGGAAGTCCAGCGTACAACATCAACATGCTGTGCGGCTCCGGTCTGAAAACGGTTGCCCTCGGCTATCAGGCGATCCGGGCCGGTGATGCTACCGTCGTCGTCGCTGGCGGACAAGAGTCCATGTCCAAGGCACCGCATGTGATGCATATGCGCAGTGGCACCAAAATGGGCGAGGCCAAGATGGTCGATTCGATGCTGAACGACGGCCTGACGGATGCGTTCTACGATCTGCACATGGGCATTACGGCGGAAAATCTAGCCAAAGAGTTCGACATTGGCCGAGAGGCGCAGGATGCATTCGCCGCCAAGAGCCAACAGCTGGCTGAAGAATCTCAACAGAAAGGATACTTTACCGAGGAGATCGTACCGGTGGAGGTGGCGGGCCGCAAGGAAACGATCAAGTTTGCGGTGGACGAGTACCCGAAGCATGGTACCACGGCGGAAGGGCTGGCCAAGCTGCGGCCGTGCTTCATTAAGGACGGTACCGTTACGCCCGGTAACGCGTCCGGTAT]
[+] EMBL AL929744 [GAATCGCACGAGGTTAAAGGAAGTCCAGCGTACAACATCAACATGCTGTGCGGCTCCGGTCTGAAAACGGTTGCCCTCGGCTATCAGGCGATCCGGGCCGGTGATGCTACCGTCGTCGTCGCTGGCGGACAAGAGTCCATGTCCAAGGCACCGCATGTGATGCATATGCGCAGTGGCACCAAAATGGGCGAGGCCAAGATGGTCGATTCGATGCTGAACGACGGCCTGACGGATGCGTTCTACGATCTGCACATGGGCATTACGGCGGAAAATCTAGCCAAAGAGTTCGACATTGGCCGAGAGGCGCAGGATGCATTCGCCGCCAAGAGCCAACAGCTGGCTGAAGAATCTCAACAGAAAGGATACTTTACCGAGGAGATCGTACCGGTGGAGGTGGCGGGCCGCAAGGAAACGATCAAGTTTGCGGTGGACGAGTACCCGAAGCATGGTACCACGGCGGAAGGGCTGGCCAAGCTGCGGCCGTGCTTCATTAAGGACGGTACCGTTACGCCCGGTAACGCGTCCGGTAT]
consensusID : consensus_9650#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 441 fasta sequence
[CCCCGTTTTTTTAAAGCACGCTGACGTGTTGCGGACTGTCATCTGGTAGCGGCGTTTTCCTCTTTTATTTTACCCTACCAGTTATCGTGTGCTTGTGCAACCCTTTGCTTATCGGTGCATTTATCGAATCGCAGTTGGCGAGATTCGACAGTTTTTGATAAAACGCATAACTTAACGGTGTGTTAAATTACACTACGCGCGAAAGCTCGATTCAAAATGACGTCAGCAGGAGAAGTTTTCATCGTGTCGGCCGCCAGAACCCCGATCGGTAATTTCATGGGCACACTCGCGTCGCTTAGTGCCGCCGATCTTGGTGCGGTGGCCGTGAAAGAGGTGCTGCAGCGAGCCAGCGTCGATCCGGCCGATGTGAGCGAGGTCATTCTCGGCAAGCCCTAACGGCGGCCAGGGACAGAACCCGGCCCGCAGGCTTCCATTAAAGCG]
[+] EMBL AL692972 [CCCCGTTTTTTTAAAGCACGCTGACGTGTTGCGGACTGTCATCTGGTAGCGGCGTTTTCCTCTTTTATTTTACCCTACCAGTTATCGTGTGCTTGTGCAACCCTTTGCTTATCGGTGCATTTATCGAATCGCAGTTGGCGAGATTCGACAGTTTTTGATAAAACGCATAACTTAACGGTGTGTTAAATTACACTACGCGCGAAAGCTCGATTCAAAATGACGTCAGCAGGAGAAGTTTTCATCGTGTCGGCCGCCAGAACCCCGATCGGTAATTTCATGGGCACACTCGCGTCGCTTAGTGCCGCCGATCTTGGTGCGGTGGCCGTGAAAGAGGTGCTGCAGCGAGCCAGCGTCGATCCGGCCGATGTGAGCGAGGTCATTCTCGGCAAGCCCTAACGGCGGCCAGGGACAGAACCCGGCCCGCAGGCTTCCATTAAAGCG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9650#1 ------------------------------------------------------------
consensus_9650#3 ------------------------------------------------------------
consensus_9650#0 CCGCGGACGCGTGGGCGCCCACCACCCCCCGGCACACTGTGTTATTCAACAAGCACGTTG 60
consensus_9650#2 ------------------------------------------------------------
consensus_9650#1 ------------------------------------------------------------
consensus_9650#3 ------------------------------------------------------------
consensus_9650#0 CGCAAACCAACACTCCCCACAGAAACCCGTTCCGTGGAGGGGATAAAAGCGTATTGGAGA 120
consensus_9650#2 ------------------------------------------------------------
consensus_9650#1 ------------------------------------------------------------
consensus_9650#3 ------------------------------------------------------------
consensus_9650#0 AAAAAAACCCGTTTCGTGTGCCGCATCCACACAGCACAGCATTGAACCTGACGGTGGTGA 180
consensus_9650#2 ------------------------------------------------------------
consensus_9650#1 --------------------------GCCGAGGCTTAAGAAAGCACGCTGACGTGTTGCG 34
consensus_9650#3 ---------------------------CCCCGTTTTTTTAAAGCACGCTGACGTGTTGCG 33
consensus_9650#0 AAATGTTTGATTTCCATTCGTAAAGTTCACTTGCGCGAGAAAGCACGCTGACGTGTTGCG 240
consensus_9650#2 ---------------------------------------GAATCGCACGAGGTTAAAGGA 21
** * * * * *
consensus_9650#1 GACCTGTCATCTGGTAGCGGCGTTTTCCTCTTTTATTTTACCCTACCAGTTATCGTGTAG 94
consensus_9650#3 GAC-TGTCATCTGGTAGCGGCGTTTTCCTCTTTTATTTTACCCTACCAGTTATCGTGTG- 91
consensus_9650#0 GACCTGTCATCTGGTAGCGGCGTTTTCCTCGTTTATTTTACCCTGCCAGTTATCGTGTG- 299
consensus_9650#2 AGTCCAGCGTACAACATCAACATGCTGTGCGGCTCCGGTCTGAAAACGGTTGCCCTCGGC 81
* * * * * * * * * * * *** * *
consensus_9650#1 CTTTGTGCAACCCTTTGCTTATACGGTGCATTTATCGAATCGCAGTTGGCGAGATTCGAC 154
consensus_9650#3 -CTTGTGCAACCCTTTGCTTAT-CGGTGCATTTATCGAATCGCAGTTGGCGAGATTCGAC 149
consensus_9650#0 CTTTGTGCAACCCTTTGCTTAT-CGGTGCATTTATCGAATCGCAGTTCGCGAGATTCGAC 358
consensus_9650#2 TATCAGGCGATCCGG-GCCGGT--GATGCTACCGTCG--TCGTCGCTGGCGGA---CAAG 133
* ** * ** ** * * *** *** *** * * *** * *
consensus_9650#1 AGTTTTTTGATAAAACGCATAACTTAACG-GTGTGTTAAATTACACTA---CGCGCGAAA 210
consensus_9650#3 AGTTTTT-GATAAAACGCATAACTTAACG-GTGTGTTAAATTACACTA---CGCGCGAAA 204
consensus_9650#0 AGTTTTT-GATAAAACGCATAACTTAACG-GTGTGTTAAATTACACTA---CGCGCGGA- 412
consensus_9650#2 AGTCCATGTCCAAGGCACCGCATGTGATGCATATGCGCAGTGGCACCAAAATGGGCGAGG 193
*** * ** * * * * * * * ** * * *** * * ***
consensus_9650#1 GCTCGATTCAAAATGACGTCAGCAGGAGAAGTTTTCATCGTGTCGGCCGCCAGAACCCCG 270
consensus_9650#3 GCTCGATTCAAAATGACGTCAGCAGGAGAAGTTTTCATCGTGTCGGCCGCCAGAACCCCG 264
consensus_9650#0 GCTCGATTCAAAATGACGTCATCAGGAGAAGTTTTCATCGTGTCGGCCGCCAGAACCCCG 472
consensus_9650#2 CCAAGATGGTCGATT-CGATGCTGAACGACGGCCTGACGGATGCGTTCTACGATCTGCAC 252
* *** ** ** ** * * * * ** * * *
consensus_9650#1 ATCGGTAATTTCATGGGCACACTCGCGTCGCTTAGTGCCGCCGATCTTGGTGCGGTGGC- 329
consensus_9650#3 ATCGGTAATTTCATGGGCACACTCGCGTCGCTTAGTGCCGCCGATCTTGGTGCGGTGGC- 323
consensus_9650#0 ATCGGTAATTTCATGGGCACACTCGCGTCGCTTAGTGCCGCCGATCTTGGAGCGGTGGC- 531
consensus_9650#2 ATGGGCATTACGGCGGAAAATCTAGC------CAAAGAGTTCGACATTGGCCGAGAGGCG 306
** ** * * ** * ** ** * * *** **** * ***
consensus_9650#1 CGTGAAAGAGGTGCTGCAGCGAGCCA-CGTCGATCCGGC-GATGTGAGC-GAGGTCATTC 386
consensus_9650#3 CGTGAAAGAGGTGCTGCAGCGAGCCAGCGTCGATCCGGCCGATGTGAGC-GAGGTCATTC 382
consensus_9650#0 CGTGAAAGAAGTGCTACAGCGAGCCAGCGTCGATCCGGCCGATGTGAGC-GAGGTCATTC 590
consensus_9650#2 CAGGATGCATTCGCCGCCAAGAGCCAACAGCTGGCTGAAGAATCTCAACAGAAAGGATAC 366
* ** * ** * ****** * * * * ** * * * ** ** *
consensus_9650#1 TCGGCCAAGGCCTAAGCGGC-GGCCAGGGTACAGAACCCTGNGTCCGNNCAGCGCTTCNC 445
consensus_9650#3 TCGGC--AAGCCCTAACGGC-GGCCAGGG-ACAGAACCC--GGCCCGCA----GGCTTCC 432
consensus_9650#0 TCGGCC-AAGCCCTAACGGCCGGCCAGGG-ACAGAACCC--GGCCCGCCA---GGCTTCC 643
consensus_9650#2 TTTACCGAGGAGATCGTACCGGTGGAGGTGGCGGGCCGCAAGGAAACGATCAAGTTTGCG 426
* * * * * * *** * * * * * * *
consensus_9650#1 ATTAAAGCGGGCGTACCGTAAGGAAGTCCCAGCGTACAACNATCAACCATGCTGTGCGGC 505
consensus_9650#3 ATTAAAGCG--------------------------------------------------- 441
consensus_9650#0 ATTAAAGCGGGCGTACCG-AAGGAAGTCCCAGCGTACAACATCAA--CATGCTGTGCGGC 700
consensus_9650#2 GTGGACGAGTACCCGAAGCATGGTACCACGGCGGAAGGGCTGGCCAAGCTGCGGCCGTGC 486
* * * *
consensus_9650#1 GTNCCGGTCTGAAAGACGGTTGCCCTCGGCTATCAGNGCGATAC---------------- 549
consensus_9650#3 ------------------------------------------------------------
consensus_9650#0 --TCCGGTCTGAAA-ACGGTTGCCCTCGGCTATCAGGCGATCCGGGCCGGTGATGCTACC 757
consensus_9650#2 TTCATTAAGGACGGTACCGTTACGCCCGGTAACGCGTCCGGTAT---------------- 530
consensus_9650#1 ------------------------------------------------------------
consensus_9650#3 ------------------------------------------------------------
consensus_9650#0 GTCGTCGTCGCTGGCGGACAAGAGTCCATGTCCAAGGCACCGCATGTGATGCATATGCGC 817
consensus_9650#2 ------------------------------------------------------------
consensus_9650#1 ------------------------------------------------------------
consensus_9650#3 ------------------------------------------------------------
consensus_9650#0 AGTGGCACCAAAATGGGCGAGGCCAAGATGGTCGATTCGATGCTGAACGACGGCCTGACG 877
consensus_9650#2 ------------------------------------------------------------
consensus_9650#1 ------------------------------------------------------------
consensus_9650#3 ------------------------------------------------------------
consensus_9650#0 GATGCGTTCTACGATCTGCACATGGGCATTACGGCGGAAAATCTAGCCAAAGAGTTCGAC 937
consensus_9650#2 ------------------------------------------------------------
consensus_9650#1 ------------------------------------------------------------
consensus_9650#3 ------------------------------------------------------------
consensus_9650#0 ATTGGCCGAGAGGCGCAGGATGCATTCGCCGCCAAGAGCCAACAGCTGGCTGAAGAATCT 997
consensus_9650#2 ------------------------------------------------------------
consensus_9650#1 ------------------------------------------------------------
consensus_9650#3 ------------------------------------------------------------
consensus_9650#0 CAACAGAAAGGATACTTTACCGAGGAGATCGTACCGGTGGAGGTGGCGGGCCGCAAGGAA 1057
consensus_9650#2 ------------------------------------------------------------
consensus_9650#1 ------------------------------------------------------------
consensus_9650#3 ------------------------------------------------------------
consensus_9650#0 ACGATCAAGTTTGCGGTGGACGAGTACCCGAAGCATGGTACCACGGCGGAAGGGCTGGCC 1117
consensus_9650#2 ------------------------------------------------------------
consensus_9650#1 ------------------------------------------------------------
consensus_9650#3 ------------------------------------------------------------
consensus_9650#0 AAGCTACGGCCGTGCTTCATTAAGGACGGTACCGTTACGCCCGGTAACGCGTCCGGTATT 1177
consensus_9650#2 ------------------------------------------------------------
consensus_9650#1 ------------------------------------------------------------
consensus_9650#3 ------------------------------------------------------------
consensus_9650#0 AACGATTCTGCCGCCGCCGTTCTGCTGATGTCCGGCGAGGAGGTCCAAAAACGAAACGCC 1237
consensus_9650#2 ------------------------------------------------------------
consensus_9650#1 ------------------------------------------------------------
consensus_9650#3 ------------------------------------------------------------
consensus_9650#0 AAACCGATGGCAAAGATCGTTGCCTACGCGCAAACGGGAATATGCCCGAAAACGATGGGC 1297
consensus_9650#2 ------------------------------------------------------------
consensus_9650#1 ------------------------------------------------------------
consensus_9650#3 ------------------------------------------------------------
consensus_9650#0 GCTGGCCCGATCTCGGCCGTACAGGCTGTGCTTCAAAAAGCCGGCTGGAAGCTGGAAGAG 1357
consensus_9650#2 ------------------------------------------------------------
consensus_9650#1 ------------------------------------------------------------
consensus_9650#3 ------------------------------------------------------------
consensus_9650#0 GTCGATCTGTTTGAGCTGAACGAGGCATTCGCAGCCCAGGCACTGGCCGTCAACAAGGGT 1417
consensus_9650#2 ------------------------------------------------------------
consensus_9650#1 ------------------------------------------------------------
consensus_9650#3 ------------------------------------------------------------
consensus_9650#0 CTTGGTGTGGACCCGGCCAAGGTTAACGTTGGCGGAGGTGCCATCGCTCTCGGACATCCC 1477
consensus_9650#2 ------------------------------------------------------------
consensus_9650#1 ------------------------------------------------------------
consensus_9650#3 ------------------------------------------------------------
consensus_9650#0 ATTGGAGCTTCGGGCTGCCGAGTACTGGTTACGCTGCTCTACGCACTCAAGCGAACAGGC 1537
consensus_9650#2 ------------------------------------------------------------
consensus_9650#1 ------------------------------------------------------------
consensus_9650#3 ------------------------------------------------------------
consensus_9650#0 GGCAAGAAGGGTGTTGCATCCTTGTGCGTTGGCGGCGGTATGGGTGTCGCCATGGCGGTG 1597
consensus_9650#2 ------------------------------------------------------------
consensus_9650#1 ------------------------------------------------------------
consensus_9650#3 ------------------------------------------------------------
consensus_9650#0 GAAATGGTGTGAAGACGCTTTTATGGAACAGTTTTGTACTTACGCTTACCGAATGATATG 1657
consensus_9650#2 ------------------------------------------------------------
consensus_9650#1 ------------------------------------------------------------
consensus_9650#3 ------------------------------------------------------------
consensus_9650#0 TATTTTTCGTACTCAATTGTATTTTTTCTTCTTTCTATGAAGAGTATTCAGTGTAAGGCA 1717
consensus_9650#2 ------------------------------------------------------------
consensus_9650#1 ------------------------------------------------------------
consensus_9650#3 ------------------------------------------------------------
consensus_9650#0 ACTGCTGCCGTACCCTACAGCATCATAAATCGCAAGTGACTATGGCAATAAACGTATAAT 1777
consensus_9650#2 ------------------------------------------------------------
consensus_9650#1 --------------------
consensus_9650#3 --------------------
consensus_9650#0 TCTCTTAAAATTCCTGCACT 1797
consensus_9650#2 --------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||