These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9650#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 16 consensus length = 1797 fasta sequence [CCGCGGACGCGTGGGCGCCCACCACCCCCCGGCACACTGTGTTATTCAACAAGCACGTTGCGCAAACCAACACTCCCCACAGAAACCCGTTCCGTGGAGGGGATAAAAGCGTATTGGAG-AAAAAAAACCCGTTTCGTGTGCCGCATCCACACAGCACAGCATTGAACCTGACGGTGGTGAAAATGTTTGATTTCCATTCGTAAAGTTCACTTGCGCGAGAAAGCACGCTGACGTGTTGCGGACCTGTCATCTGGTAGCGGCGTTTTCCTCGTTTATTTTACCCTGCCAGTTATCGTGTGCTTTGTGCAACCCTTTGCTTATCGGTGCATTTATCGAATCGCAGTTCGCGAGATTCGACAG-TTTTTGA-T-AAAACGCATAACTTAACGGTGTGTTAAATTACACTACGCGCG-GAGCTCGATTCAAAATGACGTCATCAGGAGAAGTTTTCATCGTGTCGGCCGCCAGAACCCCGATCGGTAATTTCATGGGCACACTCGCGTCGCTTAGTGCCGCCGATCTTGGAGCGGTGGCCGTGAAAGAAGTGCTACAGCGAGCCAGCGTCGATCCGGCCGATGTGAGCGAGGTCATTCTCGGCCAAGCCCTAACGGCCGGCCA-GGGACAGAACCCGGCCCGCCAGGCTTCCATTAAAGCGGGCGTACCGAAGGAAGTCCCAGCGTACAACATCAACATGCTGTGCGGCTCCGGTCTGAAAACGGTTGCCCTCGGCTATCAGGCGATCCGGGCCGGTGATGCTACCGTCGTCGTCGCTGGCGGACAAGAGTCCATGTCCAAGGCACCGCATGTGATGCATA-TGCGCAGTGGCACCAAAATGGGCGAGGCCAAGATGGTCGATTCGATGCTGAACGACGGCCTGACGGATGCGTTCTACGATCTGCACATGGGCATTACGGCGGAA--AATCT-AGCCAAAG-AGTTCGACATTGGCCG-AGAGGCGCAG-GATGCATTCGCCGCCAAGAGCCAACAGCTGGCTGAAGAATCTCAACAGAAAGGATACTTTACCGAGGAGATCGTACCGGTGGAGGTGGCGGGCCGCAAGGAAACGATCAAGTTTGCGGTGGACGAGTACCCGAAGCATGGTACCACGGCGGAAGGGCTGGCCAAGCTACGGCCGTGCTTCATTAAGGACGGTACCGTTACGCCCGGTAACGCGTCCGGTATTAACGATTCTGCCGCCGCCGTTCTGCTGATGTCCGGCGAGGAGGTCCAAAAACGAAACGCCAAACCGATGGCAAAGATCGTTGCCTACGCGCAAACGGGAATATGCCCGAAAACGATGGGCGCTGGCCCGATCTCGGCCGTACAGGCTGTGCTTCAAAAAGCCGGCTGGAAGCTGGAAGAGGTCGATCTGTTTGAGCTGAACGAGGCATTCGCAGCCCAGGCACTGGCCGTCAACAAGGGTCTTGGTGTGGACCCGGCCAAGGTTAACGTTGGCGGAGGTGCCATCGCTCTCGGACATCCCATTGGAGCTTCGGGCTGCCGAGTACTGGTTACGCTGCTCTACGCACTCAAGCGAACAGGCGGCAAGAAGGGTGTTGCATCCTTGTGCGTTGGCGGCGGTATGGGTGTCGCCATGGCGGTGGAAATGGTGTGAAGACGCTTTTATGGAACAGTTTTGTACTTACGCTTACCGAATGATATGTATTTTTCGTACTCAATTGTATTTTTTCTTCTTTCTATGAAGAGTATTCAGTGTAAGGCAACTGCTGCCGTACCCTACAGCATCATAAATCGCAAGTGACTATGGCAATAAACGTATAATTCTCTTAAAATTCCTGCACT] [+] EMBL BM588029 [CCGCGGACGCGTGGGCGCCCACCACCCCCCGGCACACTGTGTTATTCAACAAGCACGTTGCGCAAACCAACACTCCCCACAGAAACCCGTTCCGTGGAGGGGATAAAAGCGTATTGGAG AAAAAAAACCCGTTTCGTGTGCCGCATCCACACAGCACAGCATTGAACCTGACGGTGGTGAAAATGTTTGATTTCCATTCGTAAAGTTCACTTGCGCGAGAAAGCACGCTGACGTGTTGCGGTCCTGTCATCTGGTAGCGGCGTTTTCCTCGTTTATTTTACCCTGCCAGTTACCGTGTGCTTTGTGCAACCCTTTGCTTATCGGTGCATTTATCGAATCGCAGTTCGCGAGATTCGACAG TTTTTGA T AAAACGCATAACTTAACGGTGTGTTAAATTACACTACGCGCG GAGCTCGATTCAAAATGACGTCATCAGGAGAAGTTTTCATCGTGTCGGCCGCCAGAACCCCGATCGGTAATTTCATGGGCACACTCGCGTCGCTTAGTGCCGCCGATCTTGGAGCGGTGGCCGTGAAAGAAGTGCTACAGCGAGCCAGCGTCGATCCGGCCGATGTGAGCGAGGTCATTCTCGGGCAAGCCCTAACGGCCGGCCAGGGGACAGAACCC ] [+] EMBL BM613120 [ ccgcaaCGCCCACCACCCCCCGGCACACTGTGTTATTCAACAAGCACGTTGCGCAAACCAACACTCCCCACAGGAACCCGTTCCGTGGAGGGGATAAAAGCGTATTGGAG AAAAAAAACCCGTTTCGTGTGCCGCATCCACACAGCACAGCATTGAACCTGACGGTGGTGAAAATGTTTGATTTCCATTCGTAAAGTTCACTTGCGCGAGAAAGCACGCTGACGTGTTGCGGACCTGTCATCTGGTAGCGGCGTTTTCCTCGTTTATTTTACCCTGCCAGTTATCGTGTGCTTTGTGCAACCCTTTGCTTATCGGTGCATTTATCGAATCGCAGTTCGCGAGATTCGACAG TTTTTGA T AAAACGCATAACTTAACGGTGTGTTAAATTACACTACGCGCG GAGCTCGATTCAAAATGACGTCATCAGGAGAAGTTTTCATCGTGTCGGCCGCCAGAACCCCGATCGGTAATTTCATGGGCACACTCGCGTCGCTTAGTGCCGCCGATCTTGGTGCGGTGGCCGTGAAAGAAGTGCTGCAGCGAGCCAGCGTCGATCCGGCCGATGTGAGCGAGGTCATTCTCGGCCAAGCCCTAACGGCCGGCCA GG ] [+] EMBL BM614361 [ ccgACGTTGCGCAAACCAACACTCCCCACAGAAACCCGTTCCGTGGAGGGGATAAAAGCGTATTGGAGAAAAAAAAACCCGTTTCGTGTGCCGCATCCACAAAGCACAGCATTGAACCTGACGGTGGTGAAAATGTTTGATTTCCATTCGTAAAGTTCACTTGCGCGAGAAAGCACGCTGACGTGTTGCGGACCTGTCATCTGGTAGCGGCGTTTTCCTCTTTTATTTTACCCTACCAGTTATCGTGTGCTTTGTGCAATCCTTTGCTTATCGGTGCATTTATCGAATCGCAGTTGGCGAGATTCGACAG TTTTTGATT AAAACACATAACTTAACGGTGTGTTATATTACACTACGCGCG AAGCCTGATTCAAAATGACGTCAGCAGGAGAAGTTTTCATCGTGTCGGCCGCCAGAACCCCGATCGGTAATTTCATGGGCACACTCGCGTCGCTTAGTGCCGCCGATCTTGGAGCGGTGGCCGTGAAAGAAGTGCTACAGCGAGCCAACGTCGATCCGGCCGATGTGAGCGAGGTCATTCTCGGCCAAGCCCTAACGGCCGGCCA GGGACAGAACCCGGCCCGCCAGGCTTCCATTAAAGCGGG ] [+] EMBL BM607940 [ CCGGTTCCGTGGAGGGGATAAAAGCGTATTGGAG AAAAAAAACCCGTTTCGTGTGCCGCATCCACACAGCACAGCATTGAACCTGACGGTGGTGAAAATGTTTGATTTCCATTCGTAAAGTTCACTTGCGCGAGAAAGCACGCTGACGTGTTGCGGTCCTGTCATCTGGTAGCGGCGTTTTCCTCGTTTATTTTACCCTGCCAGTTACCGTGTGCTTTGTGCAACCCTTTGCTTATCGGTGCATTTATCGAATCGCAGTTCGCGAGATTCGACAG TTTTTGA T AAAACGCATAACTTAACGGTGTGTTAAATTACACTACGCGCG GAGCTCGATTCAAAATGACGTCATCAGGAGAAGTTTTCATCGTGTCGGCCGCCAGAACCCCGATCGGTAATTTCATGGGCACACTCGCGTCGCTTAGTGCCGCCGATCTTGGAGCGGTGGCCGTGAAAGAAGTGCTACAGCGAGCCAGCGTCGATCCGGCCGATGTGAGCGAGGTCATTCTCGGCCAAGCCCTAACGGCCGGCCA GGGACAGAACCCGGCCCGCCAGGCTTCCATTAAAGCGGGCGTACCGAAGGAAGTCCCAGCGTACAACATCAACA ] [+] EMBL BM594883 [ cCGCGAGAAAGCACGCTGACGTGTTGCGGACCTGTCATCTGGTAGCGGCGTTTTCCTCGTTTATTTTACCCTGCCAGTTATCGTGTGCTTTGTGCAACCCTTTGCTTATCGGTGCATTTATCGAATCGCAGTTCGCGAGATTCGACAG TTTTTGA T AAAACGCATAACTTAACGGTGTGTTAAATTACACTACGCGCG GAGCTCGATTCAAAATGACGTCATCAGGAGAAGTTTTCATCGTGTCGGCCGCCAGAACCCCGATCGGTAATTTCATGGGCACACTCGCGTCGCTTAGTGCCGCCGATCTTGGTGCGGTGGCCGTGAAAGAAGTGCTGCAGCGAGCCAGCGTCGATCCGGCCGATGTGAGCGAGGTCATTCTCGGCCAAGCCCTAACGGCCGGCCA GGGACAGAACCCGGCCCGCCAGGCTTCCATTAAAGCGGGCGTACCGAAGGAAGTCCCAGCGTACAACATCAACATGCTGTGCGGCTCCGGTCTGAAAACGGTTGCCCTCGGCTATCAGGCGATCCGGGCCGGTGATGCTACCGTCGTCGTCGCTGGCGGACAAGAGTCCATGTCCAAGGCACCGCATGTGATGCATA TGCGCAGTGGCACCAAAATGGGCGAGGCCAAGATGGTCGATTCGATGCTGAACGACGG ] [+] EMBL BX626364 [ GCTGACGTGTTGCGGACCTGTCATCTGGTAGCGGCGTTTTCCTCTTTTATTTTACCCTACCAGTTATCGTGTGCTTTGTGCAACCCTTTGCTTATCGGTGCATTTATCGAATCGCAGTTGGCGAGATTCGACAG TTTTTGA T AAAACGCATAACTTAACGGTGTGTTAAATTACACTACGCGCGAAAGCTCGATTCAAAATGACGTCAGCAGGAGAAGTTTTCATCGTGTCGGCCGCCAGAACCCCGATCGGTAATTTCATGGGCACACTCGCGTCGCTTAGTGCCGCCGATCTTGGTGCGGTGGCCGTGAAAGAGGTGCTGCAGCGAGCCAGCGTCGATCCGGCCGATGTGAGCGAGGTCATTCTCGGCCAAGCCCTAACGGCCGGCCA GGGACAGAACCCGGCCCGCCAGGCTTCCATTAAAGCGGGCGTACCGAAGGAAGTCCCAGCGTACAACATCAACATGCTGTGCGGCTCCGGTCTGAAAACGGTTGCCCTCGGCTATCAGGCGATCCGGGCCGGTGATGCTACCGTCGTCGTCGCTGGCGGACAAGAGTCCATGTCCAAGGCACCGCATGTGATGCATA TGCGCAGTGGCACCAAAATGGGCGAGGCCAAGATGGTCGATTCGATGCTGAACGACGGCCTGACGGATGCGTTCTACGATCTGCACATGGGCATTACNGCGGAA AATCT AGCCAAAG AGT ] [+] EMBL BM582772 [ CCGGTCATCTGGTAGCGGCGTTTTCCTCGTTTATTTTACCCTGCCAGTTACCGTGTGCTTTGTGCAACCCTTTGCTTATCGGTGCATTTATCGAATCGCAGTTCGCGAGATTCGACAG TTTTTGA T AAAACGCATAACTTAACGGTGTGTTAAATTACACTACGCGCG GAGCTCGATTCAAAATGACGTCATCAGGAGAAGTTTTCATCGTGTCGGCCGCCAGAACCCCGATCGGTAATTTCATGGGCACACTCGCGTCGCTTAGTGCCGCCGATCTTGGAGCGGTGGCCGTGAAAGAAGTGCTACAGCGAGCCAGCGTCGATCCGGCCGATGTGAGCGAGGTCATTCTCGGCCAAGCCCTAACGGCCGGCCA GGGACAGAACCCGGCCCGCCAGGCTTCCATTAAAGCGGGCGTACCGAAGGAAGTCCCAGCGTACAACATCAACATGCTGTGCGGCTCCGGTCTGAAAACGGTTGCCCTCGGCTATCAGGCGATCCGGGCCGGTGATGCTACCGTCGTCGTCGCGGGCGGACAAGAGTCCATGTCCAAGGCACCGCATGTGATGCATA TGCGCAGTGGCACCAAAATGGGCGAGGCCAAGATGGTCGATTCGATGCTGAACGACGGCCTGACGGATGCGTTCTACGATCTGCACATGGGCATTACGGCGGAA AA ] [+] EMBL BX625044 [ GCAGTTCGCGAGATTCGACAGTTTTTTGA TAAAAACACATAACTTAACGGTGTGTTAAATTACACTACGCGCGAAAGCTCGCTTCAAAATGACGTCAGCAGGAGAAGTTTTCATCGTGTCGGCCGCCAGAACCCCGATCGGTAATTTCATGGGTACACTCGCGTCGCTTAGTGCCGCCGATCTTGGTGCGGTGGCCGTGAAAGAGGTGCTGCAGCGAGCCAGCGTCGATCCGGCCGATGTGAGCGAGGTCATTCTCGGCCAAGCCCTAACGGCCGGCCA GGGACAGAACCCGGCCCGCCAGGCTTCCATTAAAGCGGGCGTACCGAAGGAAGTCCCATCGTACAACATCAACATGCTGTGCGGCTCCGGTCTGAAAACGGTTGCCCTCGGCTATCAGGCGATCCGGGCCGGTGATGCTACCGTCGTCGTCGCTGGCGGACAAGAGTCCATGTCCAAGGCACCGCATGTGATGCATA TGCGCAGTGGCACCAAAATGGGCGAGGCCAAGATGATCGATTCGATGCTGAACGATGGTCTGACGGATGCGTTCTACGATCTGCACATGGGCATTACGGCGGAA AATCT AGCCAAAG AGTTCGACATTGGCCG AGANGCACAG GATGCATTCGCCGCCAAGAGCCAACAGCTGGCTGAAGAATCTCAACAGAAAGGATACTTTACTGAGG ] [+] EMBL AL693056 [ tgcccGACGGTTTCATCGTGTCGGCCGCCAGAA CCCGATCGGTAATTTCATGGGCACACTCGCGTCGCTTAGTGCCGCCGATCTTGGTGCGGTGGCCGTGAAAGAGGTGCTGCAGCGAGCCAGCGTCGATCCGGCCGATGTGAGCGAGGTCATTCTCGGCCAAGCCCTAACGGCCGGCCAGGGGACAGAACCCGGCCCGCCAGGCTTCCATTAAAGCGGGCGTACCGAAGGAAGTCCCAGCGTACAACATCAACATGCTGTGCGGCTCCGGTCTGAAAACGGTTGCCCTCGGCTATCAGGCGATCCGGGCCGGTGATGCTACCGTCGTCGTCGCTGGCGGACAAGAGTCCATGTCCAAGGCACCGCATGTGATGCATATTGCGCAGTGGCACCAAAATGGGCGAGGCCAAGATGGTCGATTCGATGCTGAACGACGGCCTGACGGATGCGTTCTACGATCTGCACATGGGCATTACGGCGGCACCAATCTCAGCCAAAGCAGTTCGACATTGGCCGCACAGGCGCAGCGATGCATTCGCCG CAAGAGCCAACAGCTGGCTGAAGAATCTCAA ] [+] EMBL BX618515 [ TCGGGTCGGCCGCCAGAACCCCGATCGGTAATTTCATGGGCACACTCGCGTCGCTTAGTGCCGCCGATCTTGGAGCGGTGGCCGTGAAAGAAGTGCTACAGCGAGCCAGCGTCGATCCGGCCGATGTGAGCGAGGTCATTCTCGGCCAAGCCCTAACGGCCGGCCA GGGACAGAACCCGGCCCGCCAGGCTTCCATTAAAGCGGGCGTACCGAAGGAAGTCCCAGCGTACAACATCAACATGCTGTGCGGCTCCGGTCTGAAAACGGTTGCCCTCGGCTATCAGGCGATCCGGGCCGGTGATGCTACCGTCGTCGTCGCGGGCGGACAAGAGTCCATGTCCAAGGCACCGCATGTGATGCATA TGCGCAGTGGCACCAAAATGGGCGAGGCCAAGATGGTCGATTCGATGCTGAACGACGGCCTGACGGATGCGTTCTACGATCTGCACATGGGCATTACGGCGGAA AATCT AGCCAAAG AGTTCGACATTGGCC ] [+] EMBL BX605788 [ CTACAGCGAGCCAACGTCGATCCGGCCGATGTGAGCGAGGTCATTCTCGGCCAAGCCCTAACGGCCGGCCA GGGACAGAACCCGGCCCGCCAGGCTTCCATTAAAGCGGGCGTACCGAAGGAAGTCCCAGCGTACAACATCAACATGCTGTGCGGCTCCGGTCTGAAAACGGTTGCCCTCGGCTATCAGGCGATCCGGGCCGGTGATGCTACCGTCGTCGTCGCGGGCGGACAAGAGTCCATGTCTAAGGCACCGCATGTGATGCATA TGCGCAGTGGCACCAAAATGGGCGAGGCCAAGATGGTCGATTCGATGCTGAACGATGGTCTGACGGATGCGTTCTACGATCTGCACATGGGCATTACGGCGGAA AATCT AGCCAAAG AGTTCGACATTGGCCG AGAGGCGCAG GATGCATTCGCCGCCAAGAGCCAGCAGCTGGCTGAAGAATCTCAACAGAAAGGATACTTTACCGAGGAGATCGTACCGGTGGAGGTGGCGGGCCGCAAGGAAACGATCAAGTTTGCGGTGGACGAGTACCCGAAGCATGGTACCACGGCGGAAGGGCTGGCCAAGCTACGGCCGTGCTTCATTAAGGACGGTACCGTTACCCCCGGTAACGCGTCCGGTATTAA ] [+] EMBL BM650555 [ ccGTCTGAAAACGGTTGCCCTCGGCTATCAGGCGATCCGGGCCGGTGATGCTACCGTCGTCGTCGCGGGCGGACAAGAGTCCATGTCCAAGGCACCGCATGTGATGCATA TGCGCAGTGGCACCAAAATGGGCGAGGCCAAGATGGTCGATTCGATGCTGAACGACGGCCTGACGGATGCGTTCTACGATCTGCACATGGGCATTACGGCGGAA AATCT AGCCAAAG AGTTCGACATTGGCCG AGAGGCGCAG GATGCATTCGCCGCCAAGAGCCAACAGCTGGCTGAAGAATCTCAACAGAAAGGATACTTTACCGAGGAGATCGTACCGGTGGAGGTTGCGGGCCGCAAGGAAACGATCAAGTTTGCGGTGGACGAGTACCCGAAGCATGGTACCACGGCGGAAGGGCTGGCCAAGCTGCGGCCGTGCTTCATTAAGGACGGTACCGTTACGCCCGGTAACGCGTCCGGTATTAACGATTCTGCCGCCGCCGT ] [+] EMBL BX622768 [ GGTACCGTTACGCCCGGTAACGCGTCCGGTATTAACGATTCTGCCGCCGCCGTTCTGCTGATGTCCGGCNAGGAGGTTCANAAg ] [+] EMBL BX612735 [ GCCCGGTAACGCGTCCGGTATTAACGATTCTGCCGCCGCCGTTCTGCTGATGTCCGGCGAGGAGGTCCAAAAACGAAACGCCAAACCGATGGCAAAGATCGTTGCCTACGCGCAAACGGGAATATGCCCGAAAACGATGGGCGCTGGCCCGATCTCGGCCGTACAGGCTGTGCTTCAAAAAGCCGGCTGGAAGCTGGAAGAGGTCGATCTGTTTGAGCTGAACGAGGCATTCGCAGCCCAGGCACTGGCCGTCAACAAGGGTCTTGGTGTGGACCCGGCCAAGGTTAACGTTGGCGGAGGTGCCATCGCTCTCGGACATCCCATTGGAGCTTCGGGCTGCCGAGTACTGGTTACGCTGCTCTACGCACTCAAGCGAACAGGCGGCAAGAAGGGTGTTGCATCCTTGTGCGTTGGCGGCGGTATGGGTGTCGCCATGGCGGTGGAAATGGTGTGAAGACGCTTTTATGGAACAGTTTTGTACTTACGCTTACCGAATGATATGTATTTTTCGTACTCAATTGTATTTTTTCTTCTTTCTATGAAGAGTATTCAGTGTAAGGCAACTGCTGCCGTACCCTACAGCATCATAAATCGCAAGTGACTATGGCAATAAACGTATAATTCTCTTAAAA ] [+] EMBL BX609815 [ GCCCGGTAACGCGTCCGGTATTAACGATTCTGCCGCCGCCGTTCTGCTGATGTCCGGCGAGGAGGTCCAAAAACGAAACGCCAAACCGATGGCAAAGATCGTTGCCTACGCGCAAACGGGAATATGCCCGAAAACGATGGGCGCTGGCCCGATCTCGGCCGTACAGGCTGTGCTTCAAAAAGCCGGCTGGAAGCTGGAAGAGGTCGATCTGTTTGAGCTGAACGAGGCATTCGCAGCCCAGGCACTGGCCGTCAACAAGGGTCTTGGTGTGGACCCGGCCAAGGTTAACGTTGGCGGAGGTGCCATCGCTCTCGGACATCCCATTGGAGCTTCGGGCTGCCGAGTACT ] [+] EMBL BM646707 [ ccgGGAGGAGCCATCGCTCTCGGACATCCCATTGGAGCTTCGGGCTGCCGAGTACTGGTTACGCTGCTCTACGCGCTCAAGCGAACAGGCGGCAAGAAGGGTGTTGCATCCTTGTGCGTTGGCGGCGGTATGGGTGTCGCCATGGCGGTGGAAATGGTGTGAAGACGCTTTTATGGAACAGTTTTGTACTTACGCTTACCGAATGATATGTATTTTTCGTACTCAATTGTATTTTTTCTTCTTTCTATGAAGAGTATTCAGTGTAAGGCAACTGCTGCCGTACCCTACAGCATCATAAATCACAAGTGACGATAGCAATAAACGTATAATTCTCTTAAAATTCCTGCACT] consensusID : consensus_9650#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 549 fasta sequence [GCCGAGGCTTAAGAAAGCACGCTGACGTGTTGCGGACCTGTCATCTGGTAGCGGCGTTTTCCTCTTTTATTTTACCCTACCAGTTATCGTGTAGCTTTGTGCAACCCTTTGCTTATACGGTGCATTTATCGAATCGCAGTTGGCGAGATTCGACAGTTTTTTGATAAAACGCATAACTTAACGGTGTGTTAAATTACACTACGCGCGAAAGCTCGATTCAAAATGACGTCAGCAGGAGAAGTTTTCATCGTGTCGGCCGCCAGAACCCCGATCGGTAATTTCATGGGCACACTCGCGTCGCTTAGTGCCGCCGATCTTGGTGCGGTGGCCGTGAAAGAGGTGCTGCAGCGAGCCACGTCGATCCGGCGATGTGAGCGAGGTCATTCTCGGCCAAGGCCTAAGCGGCGGCCAGGGTACAGAACCCTGNGTCCGNNCAGCGCTTCNCATTAAAGCGGGCGTACCGTAAGGAAGTCCCAGCGTACAACNATCAACCATGCTGTGCGGCGTNCCGGTCTGAAAGACGGTTGCCCTCGGCTATCAGNGCGATAC] [+] EMBL AL934727 [GCCGAGGCTTAAGAAAGCACGCTGACGTGTTGCGGACCTGTCATCTGGTAGCGGCGTTTTCCTCTTTTATTTTACCCTACCAGTTATCGTGTAGCTTTGTGCAACCCTTTGCTTATACGGTGCATTTATCGAATCGCAGTTGGCGAGATTCGACAGTTTTTTGATAAAACGCATAACTTAACGGTGTGTTAAATTACACTACGCGCGAAAGCTCGATTCAAAATGACGTCAGCAGGAGAAGTTTTCATCGTGTCGGCCGCCAGAACCCCGATCGGTAATTTCATGGGCACACTCGCGTCGCTTAGTGCCGCCGATCTTGGTGCGGTGGCCGTGAAAGAGGTGCTGCAGCGAGCCACGTCGATCCGGCGATGTGAGCGAGGTCATTCTCGGCCAAGGCCTAAGCGGCGGCCAGGGTACAGAACCCTGNGTCCGNNCAGCGCTTCNCATTAAAGCGGGCGTACCGTAAGGAAGTCCCAGCGTACAACNATCAACCATGCTGTGCGGCGTNCCGGTCTGAAAGACGGTTGCCCTCGGCTATCAGNGCGATAC] consensusID : consensus_9650#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 530 fasta sequence [GAATCGCACGAGGTTAAAGGAAGTCCAGCGTACAACATCAACATGCTGTGCGGCTCCGGTCTGAAAACGGTTGCCCTCGGCTATCAGGCGATCCGGGCCGGTGATGCTACCGTCGTCGTCGCTGGCGGACAAGAGTCCATGTCCAAGGCACCGCATGTGATGCATATGCGCAGTGGCACCAAAATGGGCGAGGCCAAGATGGTCGATTCGATGCTGAACGACGGCCTGACGGATGCGTTCTACGATCTGCACATGGGCATTACGGCGGAAAATCTAGCCAAAGAGTTCGACATTGGCCGAGAGGCGCAGGATGCATTCGCCGCCAAGAGCCAACAGCTGGCTGAAGAATCTCAACAGAAAGGATACTTTACCGAGGAGATCGTACCGGTGGAGGTGGCGGGCCGCAAGGAAACGATCAAGTTTGCGGTGGACGAGTACCCGAAGCATGGTACCACGGCGGAAGGGCTGGCCAAGCTGCGGCCGTGCTTCATTAAGGACGGTACCGTTACGCCCGGTAACGCGTCCGGTAT] [+] EMBL AL929744 [GAATCGCACGAGGTTAAAGGAAGTCCAGCGTACAACATCAACATGCTGTGCGGCTCCGGTCTGAAAACGGTTGCCCTCGGCTATCAGGCGATCCGGGCCGGTGATGCTACCGTCGTCGTCGCTGGCGGACAAGAGTCCATGTCCAAGGCACCGCATGTGATGCATATGCGCAGTGGCACCAAAATGGGCGAGGCCAAGATGGTCGATTCGATGCTGAACGACGGCCTGACGGATGCGTTCTACGATCTGCACATGGGCATTACGGCGGAAAATCTAGCCAAAGAGTTCGACATTGGCCGAGAGGCGCAGGATGCATTCGCCGCCAAGAGCCAACAGCTGGCTGAAGAATCTCAACAGAAAGGATACTTTACCGAGGAGATCGTACCGGTGGAGGTGGCGGGCCGCAAGGAAACGATCAAGTTTGCGGTGGACGAGTACCCGAAGCATGGTACCACGGCGGAAGGGCTGGCCAAGCTGCGGCCGTGCTTCATTAAGGACGGTACCGTTACGCCCGGTAACGCGTCCGGTAT] consensusID : consensus_9650#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 441 fasta sequence [CCCCGTTTTTTTAAAGCACGCTGACGTGTTGCGGACTGTCATCTGGTAGCGGCGTTTTCCTCTTTTATTTTACCCTACCAGTTATCGTGTGCTTGTGCAACCCTTTGCTTATCGGTGCATTTATCGAATCGCAGTTGGCGAGATTCGACAGTTTTTGATAAAACGCATAACTTAACGGTGTGTTAAATTACACTACGCGCGAAAGCTCGATTCAAAATGACGTCAGCAGGAGAAGTTTTCATCGTGTCGGCCGCCAGAACCCCGATCGGTAATTTCATGGGCACACTCGCGTCGCTTAGTGCCGCCGATCTTGGTGCGGTGGCCGTGAAAGAGGTGCTGCAGCGAGCCAGCGTCGATCCGGCCGATGTGAGCGAGGTCATTCTCGGCAAGCCCTAACGGCGGCCAGGGACAGAACCCGGCCCGCAGGCTTCCATTAAAGCG] [+] EMBL AL692972 [CCCCGTTTTTTTAAAGCACGCTGACGTGTTGCGGACTGTCATCTGGTAGCGGCGTTTTCCTCTTTTATTTTACCCTACCAGTTATCGTGTGCTTGTGCAACCCTTTGCTTATCGGTGCATTTATCGAATCGCAGTTGGCGAGATTCGACAGTTTTTGATAAAACGCATAACTTAACGGTGTGTTAAATTACACTACGCGCGAAAGCTCGATTCAAAATGACGTCAGCAGGAGAAGTTTTCATCGTGTCGGCCGCCAGAACCCCGATCGGTAATTTCATGGGCACACTCGCGTCGCTTAGTGCCGCCGATCTTGGTGCGGTGGCCGTGAAAGAGGTGCTGCAGCGAGCCAGCGTCGATCCGGCCGATGTGAGCGAGGTCATTCTCGGCAAGCCCTAACGGCGGCCAGGGACAGAACCCGGCCCGCAGGCTTCCATTAAAGCG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9650#1 ------------------------------------------------------------ consensus_9650#3 ------------------------------------------------------------ consensus_9650#0 CCGCGGACGCGTGGGCGCCCACCACCCCCCGGCACACTGTGTTATTCAACAAGCACGTTG 60 consensus_9650#2 ------------------------------------------------------------ consensus_9650#1 ------------------------------------------------------------ consensus_9650#3 ------------------------------------------------------------ consensus_9650#0 CGCAAACCAACACTCCCCACAGAAACCCGTTCCGTGGAGGGGATAAAAGCGTATTGGAGA 120 consensus_9650#2 ------------------------------------------------------------ consensus_9650#1 ------------------------------------------------------------ consensus_9650#3 ------------------------------------------------------------ consensus_9650#0 AAAAAAACCCGTTTCGTGTGCCGCATCCACACAGCACAGCATTGAACCTGACGGTGGTGA 180 consensus_9650#2 ------------------------------------------------------------ consensus_9650#1 --------------------------GCCGAGGCTTAAGAAAGCACGCTGACGTGTTGCG 34 consensus_9650#3 ---------------------------CCCCGTTTTTTTAAAGCACGCTGACGTGTTGCG 33 consensus_9650#0 AAATGTTTGATTTCCATTCGTAAAGTTCACTTGCGCGAGAAAGCACGCTGACGTGTTGCG 240 consensus_9650#2 ---------------------------------------GAATCGCACGAGGTTAAAGGA 21 ** * * * * * consensus_9650#1 GACCTGTCATCTGGTAGCGGCGTTTTCCTCTTTTATTTTACCCTACCAGTTATCGTGTAG 94 consensus_9650#3 GAC-TGTCATCTGGTAGCGGCGTTTTCCTCTTTTATTTTACCCTACCAGTTATCGTGTG- 91 consensus_9650#0 GACCTGTCATCTGGTAGCGGCGTTTTCCTCGTTTATTTTACCCTGCCAGTTATCGTGTG- 299 consensus_9650#2 AGTCCAGCGTACAACATCAACATGCTGTGCGGCTCCGGTCTGAAAACGGTTGCCCTCGGC 81 * * * * * * * * * * * *** * * consensus_9650#1 CTTTGTGCAACCCTTTGCTTATACGGTGCATTTATCGAATCGCAGTTGGCGAGATTCGAC 154 consensus_9650#3 -CTTGTGCAACCCTTTGCTTAT-CGGTGCATTTATCGAATCGCAGTTGGCGAGATTCGAC 149 consensus_9650#0 CTTTGTGCAACCCTTTGCTTAT-CGGTGCATTTATCGAATCGCAGTTCGCGAGATTCGAC 358 consensus_9650#2 TATCAGGCGATCCGG-GCCGGT--GATGCTACCGTCG--TCGTCGCTGGCGGA---CAAG 133 * ** * ** ** * * *** *** *** * * *** * * consensus_9650#1 AGTTTTTTGATAAAACGCATAACTTAACG-GTGTGTTAAATTACACTA---CGCGCGAAA 210 consensus_9650#3 AGTTTTT-GATAAAACGCATAACTTAACG-GTGTGTTAAATTACACTA---CGCGCGAAA 204 consensus_9650#0 AGTTTTT-GATAAAACGCATAACTTAACG-GTGTGTTAAATTACACTA---CGCGCGGA- 412 consensus_9650#2 AGTCCATGTCCAAGGCACCGCATGTGATGCATATGCGCAGTGGCACCAAAATGGGCGAGG 193 *** * ** * * * * * * * ** * * *** * * *** consensus_9650#1 GCTCGATTCAAAATGACGTCAGCAGGAGAAGTTTTCATCGTGTCGGCCGCCAGAACCCCG 270 consensus_9650#3 GCTCGATTCAAAATGACGTCAGCAGGAGAAGTTTTCATCGTGTCGGCCGCCAGAACCCCG 264 consensus_9650#0 GCTCGATTCAAAATGACGTCATCAGGAGAAGTTTTCATCGTGTCGGCCGCCAGAACCCCG 472 consensus_9650#2 CCAAGATGGTCGATT-CGATGCTGAACGACGGCCTGACGGATGCGTTCTACGATCTGCAC 252 * *** ** ** ** * * * * ** * * * consensus_9650#1 ATCGGTAATTTCATGGGCACACTCGCGTCGCTTAGTGCCGCCGATCTTGGTGCGGTGGC- 329 consensus_9650#3 ATCGGTAATTTCATGGGCACACTCGCGTCGCTTAGTGCCGCCGATCTTGGTGCGGTGGC- 323 consensus_9650#0 ATCGGTAATTTCATGGGCACACTCGCGTCGCTTAGTGCCGCCGATCTTGGAGCGGTGGC- 531 consensus_9650#2 ATGGGCATTACGGCGGAAAATCTAGC------CAAAGAGTTCGACATTGGCCGAGAGGCG 306 ** ** * * ** * ** ** * * *** **** * *** consensus_9650#1 CGTGAAAGAGGTGCTGCAGCGAGCCA-CGTCGATCCGGC-GATGTGAGC-GAGGTCATTC 386 consensus_9650#3 CGTGAAAGAGGTGCTGCAGCGAGCCAGCGTCGATCCGGCCGATGTGAGC-GAGGTCATTC 382 consensus_9650#0 CGTGAAAGAAGTGCTACAGCGAGCCAGCGTCGATCCGGCCGATGTGAGC-GAGGTCATTC 590 consensus_9650#2 CAGGATGCATTCGCCGCCAAGAGCCAACAGCTGGCTGAAGAATCTCAACAGAAAGGATAC 366 * ** * ** * ****** * * * * ** * * * ** ** * consensus_9650#1 TCGGCCAAGGCCTAAGCGGC-GGCCAGGGTACAGAACCCTGNGTCCGNNCAGCGCTTCNC 445 consensus_9650#3 TCGGC--AAGCCCTAACGGC-GGCCAGGG-ACAGAACCC--GGCCCGCA----GGCTTCC 432 consensus_9650#0 TCGGCC-AAGCCCTAACGGCCGGCCAGGG-ACAGAACCC--GGCCCGCCA---GGCTTCC 643 consensus_9650#2 TTTACCGAGGAGATCGTACCGGTGGAGGTGGCGGGCCGCAAGGAAACGATCAAGTTTGCG 426 * * * * * * *** * * * * * * * consensus_9650#1 ATTAAAGCGGGCGTACCGTAAGGAAGTCCCAGCGTACAACNATCAACCATGCTGTGCGGC 505 consensus_9650#3 ATTAAAGCG--------------------------------------------------- 441 consensus_9650#0 ATTAAAGCGGGCGTACCG-AAGGAAGTCCCAGCGTACAACATCAA--CATGCTGTGCGGC 700 consensus_9650#2 GTGGACGAGTACCCGAAGCATGGTACCACGGCGGAAGGGCTGGCCAAGCTGCGGCCGTGC 486 * * * * consensus_9650#1 GTNCCGGTCTGAAAGACGGTTGCCCTCGGCTATCAGNGCGATAC---------------- 549 consensus_9650#3 ------------------------------------------------------------ consensus_9650#0 --TCCGGTCTGAAA-ACGGTTGCCCTCGGCTATCAGGCGATCCGGGCCGGTGATGCTACC 757 consensus_9650#2 TTCATTAAGGACGGTACCGTTACGCCCGGTAACGCGTCCGGTAT---------------- 530 consensus_9650#1 ------------------------------------------------------------ consensus_9650#3 ------------------------------------------------------------ consensus_9650#0 GTCGTCGTCGCTGGCGGACAAGAGTCCATGTCCAAGGCACCGCATGTGATGCATATGCGC 817 consensus_9650#2 ------------------------------------------------------------ consensus_9650#1 ------------------------------------------------------------ consensus_9650#3 ------------------------------------------------------------ consensus_9650#0 AGTGGCACCAAAATGGGCGAGGCCAAGATGGTCGATTCGATGCTGAACGACGGCCTGACG 877 consensus_9650#2 ------------------------------------------------------------ consensus_9650#1 ------------------------------------------------------------ consensus_9650#3 ------------------------------------------------------------ consensus_9650#0 GATGCGTTCTACGATCTGCACATGGGCATTACGGCGGAAAATCTAGCCAAAGAGTTCGAC 937 consensus_9650#2 ------------------------------------------------------------ consensus_9650#1 ------------------------------------------------------------ consensus_9650#3 ------------------------------------------------------------ consensus_9650#0 ATTGGCCGAGAGGCGCAGGATGCATTCGCCGCCAAGAGCCAACAGCTGGCTGAAGAATCT 997 consensus_9650#2 ------------------------------------------------------------ consensus_9650#1 ------------------------------------------------------------ consensus_9650#3 ------------------------------------------------------------ consensus_9650#0 CAACAGAAAGGATACTTTACCGAGGAGATCGTACCGGTGGAGGTGGCGGGCCGCAAGGAA 1057 consensus_9650#2 ------------------------------------------------------------ consensus_9650#1 ------------------------------------------------------------ consensus_9650#3 ------------------------------------------------------------ consensus_9650#0 ACGATCAAGTTTGCGGTGGACGAGTACCCGAAGCATGGTACCACGGCGGAAGGGCTGGCC 1117 consensus_9650#2 ------------------------------------------------------------ consensus_9650#1 ------------------------------------------------------------ consensus_9650#3 ------------------------------------------------------------ consensus_9650#0 AAGCTACGGCCGTGCTTCATTAAGGACGGTACCGTTACGCCCGGTAACGCGTCCGGTATT 1177 consensus_9650#2 ------------------------------------------------------------ consensus_9650#1 ------------------------------------------------------------ consensus_9650#3 ------------------------------------------------------------ consensus_9650#0 AACGATTCTGCCGCCGCCGTTCTGCTGATGTCCGGCGAGGAGGTCCAAAAACGAAACGCC 1237 consensus_9650#2 ------------------------------------------------------------ consensus_9650#1 ------------------------------------------------------------ consensus_9650#3 ------------------------------------------------------------ consensus_9650#0 AAACCGATGGCAAAGATCGTTGCCTACGCGCAAACGGGAATATGCCCGAAAACGATGGGC 1297 consensus_9650#2 ------------------------------------------------------------ consensus_9650#1 ------------------------------------------------------------ consensus_9650#3 ------------------------------------------------------------ consensus_9650#0 GCTGGCCCGATCTCGGCCGTACAGGCTGTGCTTCAAAAAGCCGGCTGGAAGCTGGAAGAG 1357 consensus_9650#2 ------------------------------------------------------------ consensus_9650#1 ------------------------------------------------------------ consensus_9650#3 ------------------------------------------------------------ consensus_9650#0 GTCGATCTGTTTGAGCTGAACGAGGCATTCGCAGCCCAGGCACTGGCCGTCAACAAGGGT 1417 consensus_9650#2 ------------------------------------------------------------ consensus_9650#1 ------------------------------------------------------------ consensus_9650#3 ------------------------------------------------------------ consensus_9650#0 CTTGGTGTGGACCCGGCCAAGGTTAACGTTGGCGGAGGTGCCATCGCTCTCGGACATCCC 1477 consensus_9650#2 ------------------------------------------------------------ consensus_9650#1 ------------------------------------------------------------ consensus_9650#3 ------------------------------------------------------------ consensus_9650#0 ATTGGAGCTTCGGGCTGCCGAGTACTGGTTACGCTGCTCTACGCACTCAAGCGAACAGGC 1537 consensus_9650#2 ------------------------------------------------------------ consensus_9650#1 ------------------------------------------------------------ consensus_9650#3 ------------------------------------------------------------ consensus_9650#0 GGCAAGAAGGGTGTTGCATCCTTGTGCGTTGGCGGCGGTATGGGTGTCGCCATGGCGGTG 1597 consensus_9650#2 ------------------------------------------------------------ consensus_9650#1 ------------------------------------------------------------ consensus_9650#3 ------------------------------------------------------------ consensus_9650#0 GAAATGGTGTGAAGACGCTTTTATGGAACAGTTTTGTACTTACGCTTACCGAATGATATG 1657 consensus_9650#2 ------------------------------------------------------------ consensus_9650#1 ------------------------------------------------------------ consensus_9650#3 ------------------------------------------------------------ consensus_9650#0 TATTTTTCGTACTCAATTGTATTTTTTCTTCTTTCTATGAAGAGTATTCAGTGTAAGGCA 1717 consensus_9650#2 ------------------------------------------------------------ consensus_9650#1 ------------------------------------------------------------ consensus_9650#3 ------------------------------------------------------------ consensus_9650#0 ACTGCTGCCGTACCCTACAGCATCATAAATCGCAAGTGACTATGGCAATAAACGTATAAT 1777 consensus_9650#2 ------------------------------------------------------------ consensus_9650#1 -------------------- consensus_9650#3 -------------------- consensus_9650#0 TCTCTTAAAATTCCTGCACT 1797 consensus_9650#2 -------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||