These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9653#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 16 consensus length = 1155 fasta sequence [AATCCCGCGAGACGTTCAAGCAATCGGTTCACTT-TCTACCGACACACACAAACACACACAGCGAGCGTGTTTCTTTGTGCGTTTTTCCGTGTTGTTATTGTTTTGTACACCGTGTTCAACCGTGCATCACATTCAACCCGCCCCAAGAAACAAGTCCACATACAAAAAGCACAATGGCAGTGAGTCGA-TTGTCCATCGTGAAATTCCTGGAGTTGGCGCTGGCCATCACCTGTGTGATACTGCACTACAAAAGTCTCGGAGAGCGAGATGACATCACGAAGCTCTTGTCGGCCGGCACTTTCGTCGGGTACAGTGTGATTCTTATTGCACTATTCGCCGGGTACATGCTGAGCAATCCGATCAACAAGAAGCTGGACTTGTTCTTCAGTCTGATCGGGTGCGCCATGTTCATCGCGTCCGGCGTGCTGA-TCCTGAA-GGAG-TGGGAA-AA-TGCCTGGAACACCGACACGAAGAAGATCGGCATCTCGAAGGGTTCACTGGCCGTCACGAACGGGGTGCTATTCTTCTTCGATGCCATCTTCACGCTACGCG-ACTAGAGCGTGACTAGGATTCTCATC-TTTTTTCAACCCACCTT-CATTCACAAAATTTGCTATGATA-TTCAGT-GTGCGTGTAATCTCAGCATCTATCTCCGCCTAGCTTATCAACCAGCCTGCTCTGCTTCACATCCAACGTACAGCAGCATCATTCAAACATCCCCGAT-CCAAAGAAATAAGGTCCGTAAACTTCCGCAC-TAGAGGGCGTTATGCTAAAGCTCTTTGTTGGTGCTGTAAGCGCCTACACAGGGGGCGCGCCTTGCACGCAATACGCTTGCATGCAAACAACTCAAGGAAAGCTCTCTCTCTCCCTAGGAAAGTGTATGACGCGTATTGGTGTCTTTTGGCAAACTAGCTGTTTTGTTTGTAATGCCCATTTTCTACTTTTAAAGGTAAAATTATAACATTCTAAAATTGTTGTAAAATATCATAGCACTATATCACTTCAAGATCTGTACACTTCATCCACGCCAAACGACATCAACGAATGAACGATTTGAACCATTTATATACAAGCTAATATATACCATGTAATGCGTGTCTGAGTATGTACTCTTTTTGATATACGTGTATACAAATAAATTAATGTACAAAAAAGTTGCGG] [+] EMBL AL933296 [AATCCCCCGAGGTTATCAAGCAATCGGTTCACTTCNCTACCGACACACACAAACACACACAGCGAGCGTGTTTCTTTGTGCGTTTTTCCGTGTTGTTATTGTTTTGTACACCGTGTTCAACCGTGCATCACATTCAACCCGCCCCAAGAAACAAGTCCACATACAAAAAGCACAATGGCAGTGAGTCGACTTGTCCATCGTGAAATTCCTGGAGTTGGCGCTGGCCATCACCTGTGTGATACTGCACTACAAAAGTCTCGGAGAGCGAGATGACATCACGAAGCTCTTGTCGGCCGGCACTTTCGTCGGGTACAGTGTGATTCTTATTGCACTATTCGCCGGGTACATGCTGAGCAATCCGATCAACAAGAAGCTGGACTTGTTCTTCAGTCTGATCGGGTGCGCCATGTTCATCGCGTCCGGCGTGCTGACTCCTGAACGGAGCTGGGAACAACTGCCTGGAACACCGACACGAAGAAGATCGGCATCTCGAAGGGTTCACTGGCCGTCACGAACGGGGTGCTATTCTTCTTCCATGCCATCTTCACGCTACGCG ACTA AGTGTGACTANGATTCTCATA CTTTNTCAACCCACCTT CATTCACAAAATTTGCTATGATA TTCA T GTGCCTGTAATCTCA NATCTATCTCCGCt ] [+] EMBL BM576510 [ CCGCGAGACGTTCAAGCAATCGGTTCACTT TCTACCGACACACACAAACACACACAGCAAGCGTGTTTCTTTGTGCGTTTTTCCGTGTTGTTATTGTTTTGTACACCGTGTTCAACCGTGCATCACATTCAACCCGCCCCAAGAAACAAGTCCACATACAAAAAGCACAATGGCAGTGAGTCGA TTGTCCATCGTGAAATTCCTGGAGTTGGCGCTGGCCATCACCTGTGTGATACTGCACTACAAAAGTCTCGGAGAGCGAGATGACATCACGAAGCTCTTGTCGGCCGGCACTTTCGTCGGGTACAGTGTGATTCTTATTGCACTATTCGCCGGGTACATGCTGAGCAATCCGATCAACAAGAAGCTGGACTTGTTCTTCAGTCTGATCGGGTGCGCCATGTTCATCGCGTCCGGCGTGCTGA TCCTG ] [+] EMBL BM636720 [ CCG GAGACGTTCAAGCAATCGGTTCACTT TCTACCGACACACACAAACACACACAGCAAGCGTGTTTCTTTGTGCGTTTTTCCGTGTTGTTATTGTTTTGTACACCGTGTTCAACCGTGCATCACATTCAACCCGCCCCAAGAAACAAGTCCACATACAAAAAGCACAATGGCAGTGAGTCGA TTGTCCATCGTGAAATTCCTGGAGTTGGCGCTGGCCATCACCTGTGTGATACTGCACTACAAAAGTCTCGGAGAGCGAGATGACATCACGAAGCTCTTGTCGGCCGGCACTTTCGTCGGGTACAGTGTGATTCTTATTGCACTATTCGCCGGGTACATGCTGAGCAATCCGATCAACAAGAAGCTGGACTTGTTCTTCAGTCTGATCGGGTGCGCCATGTTCATCGCGTCCGGCGTGCTGA TCCTGAA GGAG TGGGAA AA TGCCTGGAACACCGACACGAAGAAGATCGGCATCTCGAAGGGTTCACTGGCCGTCACGAACGGGGTGCTATTCTTCTTCGATGCCATCTTCACGCTACGCG ACTAGAGCGTGACTGAGATTCTCATC TTTTTTCACCCCACCTT CATTCACAAAATTTGCTATGA ] [+] EMBL BM589562 [ CCG GAGACGTTCAAGCAATCGGTTCACTT TCTACCGACACACACAAACACACACAGCGAGCGTGTTTCTTTGTGCGTTTTTCCGTGTTGTTATTGTTTTGTACACCGTGTTCAACCGTGCATCACATTCAACCCGCCCCAAGAAACAAGTCCACATACAAAAAGCACAATGGCAGTGAGTCGA TTGTCCATCGTGAAATTCCTGGAGTTGGCGCTGGCCATCACCTGCGTGATACTGCACTACAAAAGTCTCGGAGAGCGAGATGACATCACGAAGCTCTTGTCGGCCGGCACTTTCGTCGGGTACAGTGTGATTCTTATTGCACTATTCGCCGGGTACATGCTGAGCAATCCGATCAACAAGAAGCTGGACTTGTTCTTCAGTCTGATCGGGTGCGCCATGTTCATCGCGTCCGGCGTGCTGA TCCTGAA GGAG TGGGAA AA TGCCTGGAACACCGACACGAAGAAGATCGGCATCTCAAAGGGTTCACTGGCCGTCACGAACGGGGTGCTATTCTTCTTCGATGCCATCTTCACGCTACGCG ACTAGAGCGTGACTAGGATTCTCATC TTTTTTCAACCCACCTT CATTCACAAAATTTGCTATGATA TTCAGT GTGCGTGTAATCTCAGCATCTATCTCCGCCTAGCTTATCAACCAGCCTGCTCTGCTTCACATCCAAAGTACAGCAGCA ] [+] EMBL BM626127 [ cCGAGACGTTCAAGCAATCGGTTCACTT TCTACCGACACACACAAACACACACAGCGAGCGTGTTTCTTTGTGCGTTTTTCCGTGTTGTTATTGTTTTGTACACCGTGTTCAACCGTGCATCACATTCAACCCGCCCCAAGAAACAAGTCCACATACAAAAAGCACAATGGCAGTGAGTCGA TTGTCCATCGTGAAATTCCTGGAGTTGGCGCTGGCCATCACCTGCGTGATACTGCACTACAAAAGTCTCGGAGAGCGAGATGACATCACGAAGCTCTTGTCGGCCGGCACTTTCGTCGGGTACAGTGTGATTCTTATTGCACTATTCGCCGGGTACATGCTGAGCAATCCGATCAACAAGAAGCTGGACTTGTTCTTCAGTCTGATCGGGTGCGCCATGTTCATCGCGTCCGGCGTGCTGA TCCTGAA GGAG TGGGAA AA TGCCTGGAACACCGACACGAAGAAGATCGGCATCTCAAAGGGTTCACTGGCCGTCACGAACGGGGTGCTATTCTTCTTCGATGCCATCTTCACGCTACGCG ACTAGAGCGTGACTAGGATTCTCATC TTTTTTCAACCCACCTT CATTCACAAAATTTGCTATGATA TTCAGT GTGCGTGTAATCTCAGCATCTATCTCCGCCTAGCTTATCAACCAGCCTGCTCTGC ] [+] EMBL BM616700 [ ccgGTTCAAGCAATCGGTTCACTT TCTACCGACACACACAAACACACACAGCGAGCGTGTTTCTTTGTGCGTTTTTCCGTGTTGTTATTGTTTTGTACACCGTGTTCAACCGTGCATCACATTCAACCCGCCCCAAGAAACAAGTCCACATACAAAAAGCACAATGGCAGTGAGTCGA TTGTCCATCGTGAAATTCCTGGAGTTGGCGCTGGCCATCACCTGCGTGATACTGCACTACAAAAGTCTCGGAGAGCGAGATGACATCACGAAGCTCTTGTCGGCCGGCACTTTCGTCGGGTACAGTGTGATTCTTATTGCACTATTCGCCGGGTACATGCTGAGCAATCCGATCAACAAGAAGCTGGACTTGTTCTTCAGTCTGATCGGGTGCGCCATGTTCATCGCGTCCGGCGTGCTGA TCCTGAA GGAG TGGGAA AA TGCCTGGAACACCGACACGAAGAAGATCGGCATCTCAAAGGGTTCACTGGCCGTCACGAACGGGGTGCTATTCTTCTTCGATGCCATCTTCACGCTACGCG ACTAGAGCGTGACTAGGATTCTCATC TTTTTTCAACCCACCTT CATTCACAAAATTTGCTATGATA TTCAGT GTGCGTGTAATCTCAGCATCTATCTCCGCCTAGCTTATCAACCAGCCTGCTCTGCTTCACATCCAAAGTACAGCAGCATCATTCAAACA ] [+] EMBL BM602901 [ ccgGCAATCGGTTCACTT TCTACCGACACACACAAACACACACAGCAAGCGTGTTTCTTTGTGCGTTTTTCCGTGTTGTTATTGTTTTGTACACCGTGTTCAACCGTGCATCACATTCAACCCGCCCCAAGAAACAAGTCCACATACAAAAAGCACAATGGCAGTGAGTCGA TTGTCCATCGTGAAATTCCTGGAGTTGGCGCTGGCCATCACCTGTGTGATACTGCACTACAAAAGTCTCGGAGAGCGAGATGACATCACGAAGCTCTTGTCGGCCGGCACTTTCGTCGGGTACAGTGTGATTCTTATTGCACTATTCGCCGGGTACATGCTGAGCAATCCGATCAACAAGAAGCTGGACTTGTTCTTCAGTCTGATCGGGTGCGCCATGTTCATCGCGTCCGGCGTGCTGA TCCTGAA GGAG TGGGAA AA TGCCTGGAACACCGACACGAAGAAGATCGGCATCTCGAAGGGTTCACTGGCCGTCACGAACGGGGTGCTATTCTTCTTCGATGCCATCTTCACGCTACGCG ACTAGAGCGTGACTAGGATTCTCATC TTTTTTCACCCCACCTT CATTCACAAAATTTGCTATGATA TTCAGT GTGCGTGTAATCTCAGCATCTATCTCCGCCTAGCTTATCAACCAGCCTGCTCTGCTTCACATCCAA ] [+] EMBL BM643773 [ ccgGCAATCGGTTCACTT TCTACCGACACACACAAACACACACAGCGAGCGTGTTTCTTTGTGCGTTTTTCCGTGTTGTTATTGTTTTGTACACCGTGTTCAACCGTGCATCACATTCAACCCGCCCCAAGAAACAAGTCCACATACAAAAAGCACAATGGCAGTGAGTCGA TTGTCCATCGTGAAATTCCTGGAGTTGGCGCTGGCCATCACCTGCGTGATACTGCACTACAAAAGTCTCGGAGAGCGAGATGACATCACGAAGCTCTTGTCGGCCGGCACTTTCGTCGGGTACAGTGTGATTCTTATTGCACTATTCGCCGGGTACATGCTGAGCAATCCGATCAACAAGAAGCTGGACTTGTTCTTCAGTCTGATCGGGTGCGCCATGTTCATCGCGTCCGGCGTGCTGA TCCTGAA GGAG TGGGAA AA TGCCTGGAACACCGACACGAAGAAGATCGGCATCTCAAAGGGTTCACTGGCCGTCACGAACGGGGTGCTATTCTTCTTCGATGCCATCTTCACGCTACGCG ACTAGAGCGTGACTAGGATTCTCATC TTTTTTCAACCCACCTT CATTCACAAAATTTGCTATGATA TTCAGT GTGCGTGTAATCTCAGCATCTATCTCCGCCTAGCTTATCAACCAGCCTGCTCTGCTTCACA ] [+] EMBL BM584039 [ ccgGCAATCGGTTCACTT TCTACCGACACACACAAACACACACAGCAAGCGTGTTTCTTTGTGCGTTTTTCCGTGTTGTTATTGTTTTGTACACCGTGTTCAACCGTGCATCACATTCAACCCGCCCCAAGAAACAAGTCCACATACAAAAAGCACAATGGCAGTGAGTCGA TTGTCCATCGTGAAATTCCTGGAGTTGGCGCTGGCCATCACCTGTGTGATACTGCACTACAAAAGTCTCGGAGAGCGAGATGACATCACGAAGCTCTTGTCGGCCGGCACTTTCGTCGGGTACAGTGTGATTCTTATTGCACTATTCGCCGGGTACATGCTGAGCAATCCGATCAACAAGAAGCTGGACTTGTTCTTCAGTCTGATCGGGTGCGCCATGTTCATCGCGTCCGGCGTGCTGA TCCTGAA GGAG TGGGAA AA TGCCTGGAACACCGACACGAAGAAGATCGGCATCTCGAAGGGTTCACTGGCCGTCACGAACGGGGTGCTATTCTTCTTCGATGCCATCTTCACGCTACGCGAACTAGAGCGTGACTAGGATTCTCATC TTTTTTCACCCCACCTT CATTCACAAAATTTGCTATGATATTTCAGT GTGCGTGTAATCTCAGCATCTATCTCCGCCTAGCTTATCAACCAGCCTGCTCTGCTTCA ] [+] EMBL BM601769 [ ccgGCAATCGGTTCACTT TCTACCGACACACACAAACACACACAGCAAGCGTGTTTCTTTGTGCGTTTTTCCGTGTTGTTATTGTTTTGTACACCGTGTTCAACCGTGCATCACATTCAACCCGCCCCAAGAAACAAGTCCACATACAAAAAGCACAATGGCAGTGAGTCGA TTGTCCATCGTGAAATTCCTGGAGTTGGCGCTGGCCATCACCTGTGTGATACTGCACTACAAAAGTCTCGGAGAGCGAGATGACATCACGAAGCTCTTGTCGGCCGGCACTTTCGTCGGGTACAGTGTGATTCTTATTGCACTATTCGCCGGGTACATGCTGAGCAATCCGATCAACAAGAAGCTGGACTTGTTCTTCAGTCTGATCGGGTGCGCCATGTTCATCGCGTCCGGCGTGCTGA TCCTGAA GGAG TGGGAA AA TGCCTGGAACACCGACACGAAGAAGATCGGCATCTCGAAGGGTTCACTGGCCGTCACGAACGGGGTGCTATTCTTCTTCGATGCCATCTTCACGCTACGCG ACTAGAGCGTGACTAGGATTCTCATCTTTTTTTCACCCCACCTT CATTCACAAAATTTGCTATGATA TTCAGTGGGGCGTGTAATCTCAGCATCTATCT ] [+] EMBL BX623730 [ AGCGTGTTTCTTTGTGCGTTTTTCCGTGTTGTTATTGTTTTGTACACCGTGTTCAACCGTGCATCACATTCAACCCGCCCCAAGAAACAAGTCCACATACAAAAAGCACAATGGCAGTGAGTCGA TTGTCCATCGTGAAATTCCTGGAGTTGGCGCTGGCCATCACCTGTGTGATACTGCACTACAAAAGTCTCGGAGAGCGAGATGACATCACGAAGCTCTTGTCGGCCGGCACTTTCGTCGGGTACAGTGTGATTCTTATTGCACTATTCGCCGGGTACATGCTGAGCAATCCGATCAACAAGAAGCTGGACTTGTTCTTCAGTCTGATCGGGTGCGCCATGTTCATCGCGTCCGGCGTGCTGA TCCTGAA GGAG TGGGAA AA TGCCTGGAACACCGACACGAAGAAGATCGGCATCTCGAAGGGTTCACTGGCCGTCACGAACGGGGTGCTATTCTTCTTCGATGCCATCTTCACGCTACGCG ACTAGAGTGTGACTAGGATTCTCATC TTTTTTCAACCCACCTT CATTCACAAAATTTGCTATGATA TTCAGT GTGCGTGTAATCTCAGCATCTATCTCCGCCTAGCTTATCAACCAGCCTGCTCTGCTTCACATCCAACGTACAGCAGCATCATTCAAACATCCCCGAT CCAAAGAAATAAGGTCCGTAAACTTCCGCAC TAGANGGCGTTAT ] [+] EMBL BX602808 [ CCCAAGAAACAAGTCCACATACAAAAAGCACAATGGCAGTGAGTCGA TTGTCCATCGTGAAATTCCTGGAGTTGGCGCTGGCCATCACCTGCGTGATACTGCACTACAAAAGTCTCGGAGAGCGAGATGACATCACGAAGCTCTTGTCGGCCGGCACTTTCGTCGGGTACAGTGTGATTCTTATTGCACTATTCGCCGGGTACATGCTGAGCAATCCGATCAACAAGAAGCTGGACTTGTTCTTCAGTCTGATCGGGTGCGCCATGTTCATCGCGTCCGGCGTGCTGA TCCTGAA GGAG TGGGAA AA TGCCTGGAACACCGACACGAAGAAGATCGGCATCTCAAAGGGTTCACTGGCCGTCACGAACGGGGTGCTATTCTTCTTCGATGCCATCTTCACGCTACGCG ACTAGAGCGTGACTAGGATTCTCATC TTTTTTCAACCCACCTT CATTCACAAAATTTGCTATGATA TTCAGT GTGCGTGTAATCTCAGCATCTATCTCCGCCTAGCTTATCAACCAGCCTGCTCTGCTTCACATCCAAAGTACAGCAGCATCATTCAAACATCCCCGAT CCCAAGAAATAAGGTCCGTAAACTTCCGCAC TA ] [+] EMBL BX615814 [ TGTCGGCCGGCACTTTCGTCGGGTACAGTGTGATTCTTATTGCACTATTCGCCGGGTACATGCTGAGCAATCCGATCAACAAGAAGCTGGACTTGTTCTTCAGTCTGATCGGGTGCGCCATGTTCATCGCGTCCGGCGTGCTGA TCCTGAA GGAG TGGGAA AA TGCCTGGAACACCGACACGAAGAAGATCGGCATCTCGAAGGGTTCACTGGCCGTCACGAACGGGGTGCTATTCTTCTTCGATGCCATCTTCACGCTACGCG ACTAGAGTGTGACTAGGATTCTCATC TTTTTTCAACCCACCTT CATTCACAAAATTTGCTATGATA TTCAGT GTGCGTGTAATCTCAGCATCTATCTCCGCCTAGCTTATCAACCAGCCTGCTCTGCTTCACATCCAACGTACAGCAGCATCATTCAAACATCCCCGAT CCAAAGAAATAAGGTCCGTAAATTTCCGCAC TAGAGGGCGTTATGCTAAAGCTCTTTGTTGGTGCTGTAAGCGCCTACACAGGGGGCGCGCCTTGCACGCAATACGCTTGCATGCAAACAACTCAAG ] [+] EMBL BX614792 [ GGACTTGTTCTTCAGTCTGATCGGGTGCGCCATGTTCATCGCGTCCGGCGTGCTGA TCCTGAA GGAG TGGGAA AA TGCCTGGAACACCGACACGAAGAAGATCGGCATCTCGAAGGGTTCACTGGCCGTCACGAACGGGGTGCTATTCTTCTTCGATGCCATCTTCACGCTACGCG ACTAGATTGTGACTAGGATTCTCATC TTTTTTCAACCCACCTT CATTCACAAAATTTGCTATGATA TTCAGT GTGCGTGTAATCTCAGCATCTATCTCCGCCTAGCTTATCAACCAGCCTGCTCTGCTTCACATCCAACGTACAGCAGCATCATTCAAACATCCCCGAT CCAAAGAAATAAGTTCCTTAAACTTCCGCAC TAGAGGGCGTTATGCTAAAGCTCTTTGTTGGTGCTGTAAGCGCCTACACAGGGGGCGCGCCTTGCACGCAATACGCTTGCATGCAAACAACTCAAGGAAAGCTCTCTCTCTCCCTAGGAAAGTGTATGACGCGTATTGGTGTCTTTTGGCAAACTAGCTGTTTTGTTTGTAATGCCCATTTTCTACTTTTAAAGGTAAAATTATAACATTCTAAAATTGTTGTAAAATATCATAGCACTATATCACTTCAAGATCTGTACACTTCATCCACGCCAAACGACATCAACGAATGAACGATTTGAACCATTTATATACAAGCTAATATATACCATGTAATGCGTGTCTGAGTATGTACTCTTTTTGATATACGTGTATACAAATAA ] [+] EMBL BX614662 [ GATCGGCATCTCGAAGGGTTCACTGGCCGTCACGAACGGGGTGCTATTCTTCTTCGATGCCATCTTCACGCTACGCG ACTAGAGTGTGACTAGGATTCTCATC TTTTTTCAACCCACCTT CATTCACAAAATTTGCTATGATA TTCAGT GTGCGTGTAATCTCAGCATCTATCTCCGCCTAGCTTATCAACCAGCCTGCTCTGCTTCACATCCAACGTACAGCAGCATCATTCAAACATCCCCGAT CCAAAGAAATAAGGTCCGTAAACTTCCGCAC TAGAGGGCGTTATGCTAAAGCTCTTTGTTGGTGCTGTAAGCGCCTACACAGGGGGCGCGCCTTGCACGCAATACGCTTGCATGCAAACAACTCAAGGAAAGCTCTCTCTCTCCCTAGGAAAGTGTATGACGCGTATTGGTGTCTTTTGGCAAACTAGCTGTTTTGTTTGTAATGCCCATTTTCTACTTTTAAAGGTAAAATTATAACATTCTAAAATTGTTGTAAAATATCATAGCA ] [-] EMBL BM583290 [ TTCGATGCCATCTTCACGTTACGCG ACTAGAGCGTGACTAGGATTCTCATC TTTTTTCACCCCACCTTCCATTCACAAAATTTGCTATGATA TTCAGT GTGCGTGTAATCTCAGCATCTATCTCCGCCTAGCTTATCAACCAGCCTGCTCTGCTTCACATCCAACGTACAGCAGCATCATTCAAACATCCCCGATGCCAAAGAAATAAGGTCCGTAAACTTCCGCACTTAGAGGGCGTTATGCTAAAGCTCTTTGTTGGTGCTGTAAGCGCCTACACAGGGGGCGCGCCTTGCACGCAATACGCTTGCATGCAAACAACTCAAGGAAAGCTCTCTCTCTCCCTAGGAAAGTGTATGACGCGTATTGGTGTCTTTTGGCAAACTAGCTGTTTTGTTTGTAATGTCCATTTTCTACTTTTAAAGGTAAAATTATAACATTCTAAAATTGTTGTAAAATATCATAGCACTACATCACTTCAAGATCTGTATACTTCATCCACGCCAAACGACATCAACGAATGAGCGATTTGAACCATTTATATACAAGCTAATAAATACCATGTAATGCGTGTCTGAGTATGTACTCTTTTTGATATACGTGTATACAAATAAATTAATGTACAAAAAAGTTGCGG] consensusID : consensus_9653#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1063 fasta sequence [GCAGATNGCCCAGGGTTTATGGCAGTGAGTCGATTGTCCNCTCGTGAAATTCCTGTTAGTTGGCGCTGGGCATCACCTGTGTGATACTGCACTACAAAAGTCTCGGAGAGCGAGATGACATCNNCGAAGCTCTTGTCGGCGGCACTATNNCGTACGGGTACAGTGTGATTCTTAATATTGGCGACNTAATATCGCCGAGGTACATGCTGAGCAATCCCGATCAACAAGCAAGCTAGGCACTTGTNTCTATCAGATCTTGATACCGCGGTGCGCCCATNGTAACATCGCGTCACGGCGTTGGCTGATCCCTTGANGGAGCTGGCGAACNATNGGCCTTGGGTAAACAACCTGACACCGACAAGGACACGNATTCNGGGGAATTCTTCGCACACAGTGGGTTTCNACCTTGTGGNACNGGTACGAACTNGGAAAACAGAGGCGGTAGCCATAAATNTACCTGACTATACGATGCCCACTCCTTTACAACAGNCTAACACGACGGANCTAAGAAGTGTGACACTTAAGAGGACTTTTCCGTACCAATTCGCTACTNATGTGATTACGAGATAGACCCCCAAAGACGTTATTTCGAGTTTTTCGTAGCTCACACGACAGCTCTTTGGAGTAAAGTGGAATAACTNTTACAAAGGCNTAGGGTTGCAGGGTTGGGTTCAGANACCTACCACNGGACGACGTTTCCTTTANTTCTTTCGCCGAGGCGCCTAAAGAGCTCTTGAGTTCCACACGCCAACGGACTCCCNTTGTGNCCTTCCCCNATGTGCNGCNTTTACCNCAGACCNAAGATTTCTTCCGAAAACATGTCTTAAACCAACGTGACGCAGGANGCCGAAGCTTTCNAAAATTTANCCCAAACAGAAAGAACAAAATATCANCCCCCCGGTGGAAAATNCCGACCACGACAGGTACAACAACCTTAAAAGTGNGGGTTACCAGGNTTCAATCGAANGGTTGTACCCCGGCNACAACGCATAAACGAAAGGGTGGCACGAATTNAGTTGCCATACAGAGAGTGACACATTCAANATTCATGGGTATAGGAGGA] [+] EMBL AL697606 [GCAGATNGCCCAGGGTTTATGGCAGTGAGTCGATTGTCCNCTCGTGAAATTCCTGTTAGTTGGCGCTGGGCATCACCTGTGTGATACTGCACTACAAAAGTCTCGGAGAGCGAGATGACATCNNCGAAGCTCTTGTCGGCGGCACTATNNCGTACGGGTACAGTGTGATTCTTAATATTGGCGACNTAATATCGCCGAGGTACATGCTGAGCAATCCCGATCAACAAGCAAGCTAGGCACTTGTNTCTATCAGATCTTGATACCGCGGTGCGCCCATNGTAACATCGCGTCACGGCGTTGGCTGATCCCTTGANGGAGCTGGCGAACNATNGGCCTTGGGTAAACAACCTGACACCGACAAGGACACGNATTCNGGGGAATTCTTCGCACACAGTGGGTTTCNACCTTGTGGNACNGGTACGAACTNGGAAAACAGAGGCGGTAGCCATAAATNTACCTGACTATACGATGCCCACTCCTTTACAACAGNCTAACACGACGGANCTAAGAAGTGTGACACTTAAGAGGACTTTTCCGTACCAATTCGCTACTNATGTGATTACGAGATAGACCCCCAAAGACGTTATTTCGAGTTTTTCGTAGCTCACACGACAGCTCTTTGGAGTAAAGTGGAATAACTNTTACAAAGGCNTAGGGTTGCAGGGTTGGGTTCAGANACCTACCACNGGACGACGTTTCCTTTANTTCTTTCGCCGAGGCGCCTAAAGAGCTCTTGAGTTCCACACGCCAACGGACTCCCNTTGTGNCCTTCCCCNATGTGCNGCNTTTACCNCAGACCNAAGATTTCTTCCGAAAACATGTCTTAAACCAACGTGACGCAGGANGCCGAAGCTTTCNAAAATTTANCCCAAACAGAAAGAACAAAATATCANCCCCCCGGTGGAAAATNCCGACCACGACAGGTACAACAACCTTAAAAGTGNGGGTTACCAGGNTTCAATCGAANGGTTGTACCCCGGCNACAACGCATAAACGAAAGGGTGGCACGAATTNAGTTGCCATACAGAGAGTGACACATTCAANATTCATGGGTATAGGAGGA] consensusID : consensus_9653#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 874 fasta sequence [GCAGAATCCCCCGCAGGTTTACAAGAAGCTGGACTTGTTCTTCAGTCTGATCGGTGTGCGCCATGTTCATCGCGTCGGCGTGCTGATCCTGAAGGAGTGGGAAAATGCCTGGAACACCGACACGAAGAAGATCGGCATCTCGAAGGGTTCACTGGCCGTCACGAACGGGGTGCTATTCTTCTTCGATGCCATCTTCACGCTACGCGACTAGAGTGTGACTAGGATTCTCATACTTTTTTCAACCACCTTCATTCACAAAATTTGCTATGATATTCAGTGTGCGTGTAATCTCAGCATCTATCTCCGNCTAGCTTATCAACCAGCCTGNGTCTGCTTCACATCCAACGTACAGCAGCATCATTCAAACATCCCCGATCCAAAGAAATAAGGTCCGTAAACTTCCGCACTAGAGGGCGTTATGCTAAAGCTCTAAGTCNCGGTGCTGTAAGCGCCTACACAGGGGNGCGCGCCTTGCACGCAATACGCTTGCATGCAAACAACTCAAGGCACAAGCTCTCTCTCTCCCTAGGAAANGTGTATGACAGCGTATGGTGTNCTTCTGGCCAAACTAGCCTNGGTAAACCGGTACCGGTAAATAGGCCCCAATATANCACCTAACCTATTCTCAACAGGTACAACAATCTACTACACCCAATTTCCTACANCACTCNCGGTCGGTAAACAGCACTAGTCGAGTAGCACGCTAANTATTCAAGCGTTTACCCAACAAGGGAAATTCCCTCGTTCAGCCAACCCTCATCTCACAATTACCACCACATGAGCCCCCAAAAAANACACCGGAACCCAATTTCNCAAAACGCGGGCACACTTGGACCANCCCNGCAACCTCNNTCGGGACAACCCCCACAAGTNN] [+] EMBL AL930754 [GCAGAATCCCCCGCAGGTTTACAAGAAGCTGGACTTGTTCTTCAGTCTGATCGGTGTGCGCCATGTTCATCGCGTCGGCGTGCTGATCCTGAAGGAGTGGGAAAATGCCTGGAACACCGACACGAAGAAGATCGGCATCTCGAAGGGTTCACTGGCCGTCACGAACGGGGTGCTATTCTTCTTCGATGCCATCTTCACGCTACGCGACTAGAGTGTGACTAGGATTCTCATACTTTTTTCAACCACCTTCATTCACAAAATTTGCTATGATATTCAGTGTGCGTGTAATCTCAGCATCTATCTCCGNCTAGCTTATCAACCAGCCTGNGTCTGCTTCACATCCAACGTACAGCAGCATCATTCAAACATCCCCGATCCAAAGAAATAAGGTCCGTAAACTTCCGCACTAGAGGGCGTTATGCTAAAGCTCTAAGTCNCGGTGCTGTAAGCGCCTACACAGGGGNGCGCGCCTTGCACGCAATACGCTTGCATGCAAACAACTCAAGGCACAAGCTCTCTCTCTCCCTAGGAAANGTGTATGACAGCGTATGGTGTNCTTCTGGCCAAACTAGCCTNGGTAAACCGGTACCGGTAAATAGGCCCCAATATANCACCTAACCTATTCTCAACAGGTACAACAATCTACTACACCCAATTTCCTACANCACTCNCGGTCGGTAAACAGCACTAGTCGAGTAGCACGCTAANTATTCAAGCGTTTACCCAACAAGGGAAATTCCCTCGTTCAGCCAACCCTCATCTCACAATTACCACCACATGAGCCCCCAAAAAANACACCGGAACCCAATTTCNCAAAACGCGGGCACACTTGGACCANCCCNGCAACCTCNNTCGGGACAACCCCCACAAGTNN] consensusID : consensus_9653#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 638 fasta sequence [CCGCCCACGCGTCCGGTGCGTTTTTCCGTGTTGTTATTGTTTTGTACACCGTGTTCAACCGTGCATCACATTCAACCCGCCCCAAGAAACAAGTCCACATACAAAAAGCACAATGGCAGTGAGTCGATTGTCCATCGTGAAATTCCTGGAGTTGGCGCTGGCCATCACCTGTGTGATACTGCACTACAAAAGTCTCGGAGAGCGAGATGACATCACGAAGCTCTTGTCGGCCGGCACTTTCGTCGGGTACAGTGTGATTCTTATTGCACTATTCGCCGGGTACATGCTGAGCAATCCGATCAACAAGAAGCTGGACTTGTTCTTCAGTCTGATCGGGTGCGCCATGTTCATCGCGTCCGGCGTGCTGATCCTGAAGGAGTGGGAAAATGCCTGGAACACCGACACGAAGAAGATCGGCATCTCGAAGGGTTCACTGGCCGTCACGAACGGGGTGCTATTCTTCTTCGATGCCATCTTCACGCTACGCGACTAGAGCGTGACTAGGATTCTCATCTTTTTTCACCCCACCTTCATTCACAAAATTTGCTATGATATTCAGTGTGCGTGTAATCTCAGCATCTATCTCCGCCTAGCTTATCAACCAGCCTGCTCTGCTTCACATCCAACGTACAGCAGCA] [+] EMBL BM588508 [CCGCCCACGCGTCCGGTGCGTTTTTCCGTGTTGTTATTGTTTTGTACACCGTGTTCAACCGTGCATCACATTCAACCCGCCCCAAGAAACAAGTCCACATACAAAAAGCACAATGGCAGTGAGTCGATTGTCCATCGTGAAATTCCTGGAGTTGGCGCTGGCCATCACCTGTGTGATACTGCACTACAAAAGTCTCGGAGAGCGAGATGACATCACGAAGCTCTTGTCGGCCGGCACTTTCGTCGGGTACAGTGTGATTCTTATTGCACTATTCGCCGGGTACATGCTGAGCAATCCGATCAACAAGAAGCTGGACTTGTTCTTCAGTCTGATCGGGTGCGCCATGTTCATCGCGTCCGGCGTGCTGATCCTGAAGGAGTGGGAAAATGCCTGGAACACCGACACGAAGAAGATCGGCATCTCGAAGGGTTCACTGGCCGTCACGAACGGGGTGCTATTCTTCTTCGATGCCATCTTCACGCTACGCGACTAGAGCGTGACTAGGATTCTCATCTTTTTTCACCCCACCTTCATTCACAAAATTTGCTATGATATTCAGTGTGCGTGTAATCTCAGCATCTATCTCCGCCTAGCTTATCAACCAGCCTGCTCTGCTTCACATCCAACGTACAGCAGCA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9653#0 AATCCCGCGAGACGTTCAAGCAATCGGTTCACTTTCTACCGACACACACAAACACACACA 60 consensus_9653#3 ----------------------------------------------------------CC 2 consensus_9653#2 ------------------------------------------------------------ consensus_9653#1 ------------------------------------------------------------ consensus_9653#0 GCGAGCGTGTTTCTTTGTGCGTTTTTCCGTGTTGTTATTGTTTTGTACACCGTGTTCAAC 120 consensus_9653#3 GCCCACGCGTCCG---GTGCGTTTTTCCGTGTTGTTATTGTTTTGTACACCGTGTTCAAC 59 consensus_9653#2 ------------------------------------------------------------ consensus_9653#1 ------------------------------------------------------------ consensus_9653#0 CGTGCATCACATTCAACCCGCCCCAAGAAACAAGTCCACATACAAAAAGCACAATGGCAG 180 consensus_9653#3 CGTGCATCACATTCAACCCGCCCCAAGAAACAAGTCCACATACAAAAAGCACAATGGCAG 119 consensus_9653#2 ------------------------------------------------------------ consensus_9653#1 -----------------------------------GCAGATNGCCCAGGGTTTATGGCAG 25 consensus_9653#0 TGAGTCGATTGTCCA-TCGTGAAATTCCTGG-AGTTGGCGCTGGCCATCACCTGTGTGAT 238 consensus_9653#3 TGAGTCGATTGTCCA-TCGTGAAATTCCTGG-AGTTGGCGCTGGCCATCACCTGTGTGAT 177 consensus_9653#2 ------------------------------------------------------------ consensus_9653#1 TGAGTCGATTGTCCNCTCGTGAAATTCCTGTTAGTTGGCGCTGGGCATCACCTGTGTGAT 85 consensus_9653#0 ACTGCACTACAAAAGTCTCGGAGAGCGAGATGACATCAC-GAAGCTCTTGTCGGC--CGG 295 consensus_9653#3 ACTGCACTACAAAAGTCTCGGAGAGCGAGATGACATCAC-GAAGCTCTTGTCGGC--CGG 234 consensus_9653#2 ------------------------------------------------------------ consensus_9653#1 ACTGCACTACAAAAGTCTCGGAGAGCGAGATGACATCNNCGAAGCTCTTGTCGGCGGCAC 145 consensus_9653#0 CACTTTCGTCGGGTACAGTGTGATTCTTATT---------GCACTATTCGCCGGGTACAT 346 consensus_9653#3 CACTTTCGTCGGGTACAGTGTGATTCTTATT---------GCACTATTCGCCGGGTACAT 285 consensus_9653#2 -----------------------------------------------------GCAGAAT 7 consensus_9653#1 TATNNCGTACGGGTACAGTGTGATTCTTAATATTGGCGACNTAATATCGCCGAGGTACAT 205 * ** consensus_9653#0 GCTGAGCAATCC-GATCAACAAG-AAGCTGG--ACTTGTTCTT--CAG--TCTGAT--CG 396 consensus_9653#3 GCTGAGCAATCC-GATCAACAAG-AAGCTGG--ACTTGTTCTT--CAG--TCTGAT--CG 335 consensus_9653#2 CCCCCGCA-----GGTTTACAAG-AAGCTGG--ACTTGTTCTT--CAG--TCTGAT--CG 53 consensus_9653#1 GCTGAGCAATCCCGATCAACAAGCAAGCTAGGCACTTGTNTCTATCAGATCTTGATACCG 265 * *** * * ***** ***** * ****** * *** **** ** consensus_9653#0 G-GTGCGCC-ATGTT--CATCGCGTCC-GGCGT--GCTGATCC--TGAAGGAGTGGGAAA 447 consensus_9653#3 G-GTGCGCC-ATGTT--CATCGCGTCC-GGCGT--GCTGATCC--TGAAGGAGTGGGAAA 386 consensus_9653#2 GTGTGCGCC-ATGTT--CATCGCGTC--GGCGT--GCTGATCC--TGAAGGAGTGGGAAA 104 consensus_9653#1 CGGTGCGCCCATNGTAACATCGCGTCACGGCGTTGGCTGATCCCTTGANGGAGCTGGCGA 325 ******* ** * ********* ***** ******** *** **** ** * consensus_9653#0 ATGCCTGGAACACCGACACGAAG--AAGATCGGCATCTCGAAGGGTTCACTGGCCGTCA- 504 consensus_9653#3 ATGCCTGGAACACCGACACGAAG--AAGATCGGCATCTCGAAGGGTTCACTGGCCGTCA- 443 consensus_9653#2 ATGCCTGGAACACCGACACGAAG--AAGATCGGCATCTCGAAGGGTTCACTGGCCGTCA- 161 consensus_9653#1 ACNATNGGCCTTGGGTAAACAACCTGACACCGACAAGGACACGNATTCNGGGGAATTCTT 385 * ** * * ** * * ** ** * * *** ** ** consensus_9653#0 CGAACGGGGTGCTATTCTTCTTCGATGC-CATCTTCACGCTACGCGACTAGAGC--GTGA 561 consensus_9653#3 CGAACGGGGTGCTATTCTTCTTCGATGC-CATCTTCACGCTACGCGACTAGAGC--GTGA 500 consensus_9653#2 CGAACGGGGTGCTATTCTTCTTCGATGC-CATCTTCACGCTACGCGACTAGAGT--GTGA 218 consensus_9653#1 CGCACACAGTGGGTTTCNACCTTGTGGNACNGGTACGAACTNGGAAAACAGAGGCGGTAG 445 ** ** *** *** * * * * * * * ** * * **** ** consensus_9653#0 CTAGGATTCT-CATCTTTTTTCAACCCACCTTCATTCACAA-AATTTGCTATGAT--ATT 617 consensus_9653#3 CTAGGATTCT-CATCTTTTTTCACCCCACCTTCATTCACAA-AATTTGCTATGAT--ATT 556 consensus_9653#2 CTAGGATTCT-CATACTTTTTTCAACCACCTTCATTCACAA-AATTTGCTATGAT--ATT 274 consensus_9653#1 CCATAAATNTACCTGACTATACGATGCCCACTCCTTTACAACAGNCTAACACGACGGANC 505 * * * * * * * * * * * ** ** **** * * * ** * consensus_9653#0 CAGTGTGCGTGTAATCTCAGCATCTATCTCCGCCTAGCTTATCAACCAGCCTGC-TCTGC 676 consensus_9653#3 CAGTGTGCGTGTAATCTCAGCATCTATCTCCGCCTAGCTTATCAACCAGCCTGC-TCTGC 615 consensus_9653#2 CAGTGTGCGTGTAATCTCAGCATCTATCTCCGNCTAGCTTATCAACCAGCCTGNGTCTGC 334 consensus_9653#1 TAAGAAGTGTGACACTTAAGAGGACTTTTCCGTACCAATTCGCTACTNATGTGA-----T 560 * * *** * * ** * **** ** * ** ** consensus_9653#0 TTCACATCCAACGTACAGCAGCATCATTCAAACATCCCCGATCCAAAGAAATAAGGTCCG 736 consensus_9653#3 TTCACATCCAACGTACAGCAGCA------------------------------------- 638 consensus_9653#2 TTCACATCCAACGTACAGCAGCATCATTCAAACATCCCCGATCCAAAGAAATAAGGTCCG 394 consensus_9653#1 TACGAGATAGACCCCCAAAGACGTTATTTCGAGTTTTTCGTAGCTCACACGACAGCTCTT 620 * * ** ** * consensus_9653#0 TAAACTTCCGCACTAGAGGGCGTTATGCTAAAGCTCTTTGTTG--GTGCTG----TAAGC 790 consensus_9653#3 ------------------------------------------------------------ consensus_9653#2 TAAACTTCCGCACTAGAGGGCGTTATGCTAAAGCTCTAAGTCNCGGTGCTG----TAAGC 450 consensus_9653#1 TGGAGT---AAAGTGGAATAACTNTTACAAAGGCNTAGGGTTGCAGGGTTGGGTTCAGAN 677 consensus_9653#0 GCCTAC-ACAGGGGG-CGCGCCTTGCACGCAATACGCTTGCATGC--AAACAACTCAAGG 846 consensus_9653#3 ------------------------------------------------------------ consensus_9653#2 GCCTAC-ACAGGGGNGCGCGCCTTGCACGCAATACGCTTGCATGC--AAACAACTCAAGG 507 consensus_9653#1 ACCTACCACNGGACGACGTTTCCTTTANTTCTTTCGCCGAGGCGCCTAAAGAGCTCTTGA 737 consensus_9653#0 ----AA--AGCTCTCTCTCTCCCTAGGAAAG-TGTATGAC-GCGTATTGGTGTCTTTTGG 898 consensus_9653#3 ------------------------------------------------------------ consensus_9653#2 ----CACAAGCTCTCTCTCTCCCTAGGAAANGTGTATGACAGCGTATGGTGTNCTTCTGG 563 consensus_9653#1 GTTCCACACGCCAACGGACTCCCNTTGTGNCCTTCCCCNATGTGCNGCNTTTACCNCAGA 797 consensus_9653#0 CAAACTAGCTGTTTTGTTTGTAATGCCCATTTTCTACTTTTAAAGGTAAAATTATAACAT 958 consensus_9653#3 ------------------------------------------------------------ consensus_9653#2 CCAAACTAGCCTNGGTAAACCGGTACCGGTAAATAGGCCCCAATATANCACCTAACCTAT 623 consensus_9653#1 CCNAAGATTTCTTCCGAAAACA-TGTCTTAAACCAACGTGACGCAGGANGCCGAAGC--T 854 consensus_9653#0 TCTAAAATTGTTGTAAAATATCATAGCACTATATCACTTCAAGATCTGTACACTTCATCC 1018 consensus_9653#3 ------------------------------------------------------------ consensus_9653#2 TCTCAACAGGTACAACAATCTACTACACCCAATTTCCTACANCACTCNCGGTCGGTAAAC 683 consensus_9653#1 TTCNAAAATTTANCCCAAACAGAAAGAACAAAATATCANC-CCCCCGGTGGAAAATNCCG 913 consensus_9653#0 ACGCCAAACGACATCAACGAATGAACGATTTGAACCATTTATATACAAGCTAATATATAC 1078 consensus_9653#3 ------------------------------------------------------------ consensus_9653#2 AGCACTAGTCGAGT-AGCACGCTAANTATTCAAGCGTTTACCCAACAAGGGAAATTCCCT 742 consensus_9653#1 ACCACGACAGGTACAACAACCTTAAAAGTGNGGGTTACCAGGNTTCAATCGAANGGTTGT 973 consensus_9653#0 CATGTAATGCGTGTCTGAGTATGTACTCTTTTTGATATACGTGTATACAAATAAATTAAT 1138 consensus_9653#3 ------------------------------------------------------------ consensus_9653#2 CGTTCAGCCAACCCTCATCT---CACAATTACCACCACATGAGCCCCCAAAAAANACACC 799 consensus_9653#1 ACCCCGGCNACAACGCATAAACGAAAGGGTGGCACGAATTNAGTTGCCATACAGA----- 1028 consensus_9653#0 GTACAAAAAAGTTGCGG------------------------------------------- 1155 consensus_9653#3 ------------------------------------------------------------ consensus_9653#2 GGAACCCAATTTCNCAAAACGCGGGCACACTTGGACCANCCCNGCAACCTCNNTCGGGAC 859 consensus_9653#1 GAGTGACACATTCAANATTCATGGGTATAGGAGGA------------------------- 1063 consensus_9653#0 --------------- consensus_9653#3 --------------- consensus_9653#2 AACCCCCACAAGTNN 874 consensus_9653#1 --------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||