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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9678#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 15 consensus length = 1653 fasta sequence
[CCGGAGCAGAATGTTACGTCGCCGTCGGCAGCCACCACACACTATCGGACGACACGCGAATTAACCTAA-TCAAAGCTCGTCAGTGTCTTCCCTTTT-CCGATTCTTTCTGGAGTAATTGTACACATAGTTTTGTCATCACCGCGTGCAACTTCAACATGGTTCTCAA-GCTTGCTCAGTTTGCCGGCCGTGCGATCGGTACCCGTGCGCACTACTCCACCTCCGGTAAGCGGCACGACGTGGTGATTGTGGCC-GCCACCCGCACCCCTATCGGAAGCTTCCAGAGCAGCCTGTCATCGCTTTCCGCCACCCAGCTCGG-TGCG-GTCGCGGTCGAGTCGGCGGTGAAGCAGGCGGGCATCGGCAAGGAGGACGTGCAGGAGGTGTACATCGGCAACGTGTGTGCGGCGGGGCTGGGGCAG-GCACCGGCCCGCCAGGCCGTCATCTTTGCCGGGCTGCCCAAGTCCACCATCTGCACCACGGTCAACAAGGTGTGCTCGTCCGGCATGAAGAGCGTAATGCTCGGCGCGCAAACGCTGATGCTCGGCCAGCAGGACGTG-ATCGTGGCCGGC-GGCA-TGG-AG-TCG-ATGTCGAACGTGCCGTACT-ACCTG-AAGCGGGGCAGCACACC-GTACGGTGGCGTGAGCCTGATCGATGGCATCGTGTTCGACGGGCTGACGGACGTGTACAACAAGTTCCACATGGGCAACTGTGCGGAAAACACGGCCAAGCAGATGGGCATCACG-CGCAAGGACCAGGACGAGTTCGCCGTCCGCAGCTACCAGCGCAGTGCGGCGGCCTGGGCGGCCAAAGCGTTCGAGGCGGAAATTACGCCCGTGCGCATCGCGGGCAAGCGCGGCAAGCCGGACGTGGTCGTGAGCGAGGACGAAGAGTACCGGCGGGTCAACTTTGAC-AAGTTCGGGCAGCTGGCGACCGTGTTCCAGCGGGAAAACGGCACCGTCACGGCGGGCAATGCATCCACGCTGAATGACGGCGCGTCGGCGGTGGTGCTGATGACGGCGGAGGCGGCCGAACGGTTCAAGTGCAAACCGCTCGCCCGGATCGTGGGCTTTGCCGATGCCGAGACGGACCCGATCGACTTCCCGATCGCACCGGCGCTGGCCGTGCCGAAGCTGCTGCAGCAGACGGGCGTCCGGAAGGAGGACGTGGCGATGTGGGAAATCAACGAAGCGTTCTCGCTGGTGGTCGTCGCGAACCAGCGCAAGCTGGACGTCGATCCGGAGAAGGTGAACGTGCACGGTGGGGCCGTCTCGCTCGGGCACCCGATCGGCATGTCCGGCGCGCGGCTGGTGACCCATCTGACGCACGCCCTCAAGCCGGGCCAGGTTGGCTGCGCCTCGATCTGCAACGGTGGCGGTGGCGCCTCGTCGATCCTGATCGAAAAACTGTAAGCAACAAACGGGGGTGGGATGACCCACTTTACCCGCTTTACAAATTACCTCGGAACGTGTGTGTGAGTGTGTTGGTGTGTGGAAGAGAAGTGCCCTCATTTCCCATGATCGGTAAGGGGGAAAAGGGGGCTAGAAATT-AAGTGCATTTATTAGAATAGTACGGTCCCCGTAACACCGGTCTCGACCAGGGACCGAAGATGTGCGCAGGCAATATATTTTTCTATGCTACAAGCTGGTTTTAAAATTCAATAAA]
[+] EMBL BM609282 [CCGGAGCAGAATGTTACGTCGCCGTCGGCAGCCACCACACACTATCGGACGACACGCGAATTAACCTAA TCAAACCTCGTCAGTGTCTTCCCTTTT CCGATTCTTTCTGGAGTAATTGTACACATAGTTTTGCCATCACCGCGTGCAACTTCAACATGGTTCTCAA GCTTGCTCAGTTTGCCGGCCGCGCAATCGGTACTCGTGCGCACTACTCCACCTCGGGCAAGCGGCACGACGTGGTGATTGTGGCC GCCACCCGCACTCCAATTGGAAGCTTCCAGAGCAGCCTGTCGTCGCTTTCCGCCACCCAGCTCGG TGCG GTCGCGGTCGAGTCGGCGGTGAAGCAGGCGGGCATCGGCAAGGAGGACGTGCAGGAGGTGTACATCGGCAACGTGTGTGCGGCGGGGCTGGGGCAG GCACCGGCCCGCCAGGCCGTCATCTTTGCCGGGCTGCCCAAGTCCACCATCTGCACCACGGTCAACAAGGTGTGCTCGTCCGGCATGAAGAGCGTAATGCTCGGCGCGCAAACGCTGATGCTCGGCCAGCAGGACGTG ATCGTGGCCGGC GGCA TGG AG TCG ATGTCGAACGTGCCGTACT ACCTG AAGCGGGGCAGCACACC GTACGGTGGCGTGAGCCTGATCGATGGCATCGTGT ]
[+] EMBL BM624191 [ ccgCGTCGGCAGCCACCACACACTATCGGACGACACGCGAATTAACCTAA TCAAAGCTCGGCAGTGTCTTCCCTTTT CCGATTTTTTCTGGAGTAATTGTACACATAGTTTTGTCATCACCGCGTGCAACTTCAACATGGTTCTCAA GCTTGCTCAGTTTGCCGGCCGTGCGATCGGTACCCGCGCGCACTACTCCACCTCGGGCAAGCGGCACGACGTGGTGATTGTGGCC GCCACCCGCACTCCAATTGGAAGCTTCCAGAGCAGTCTGTCATCGCTTTCCGCCACCCAGCTCGG TGCG GTCGCGGTCGAGTCGGCGGTGAAGCAGGCGGGCATCGGCAAGGAGGACGTGCAGGAGGTGTACATCGGCAACGTATGTGCGGCAGGGCTGGGGCAG GCTCCGGCCCGCCAGGCCGTCATCTTTGCCGGGCTGCCCAAGTCCACCATCTGCACCACGGTTAACAAGGTGTGCTCGTCCGGCATGAAGAGCGTAATGCTCGGCGCACAAACGCTGATGCTCGGCCAGCAGGACGTG ATCGTGGCCGGC GGCA TGG AG TCG ATGTCGAACGTGCCGTACT ACCTG AAGCGGGGCAGCACACC GTACGGTGGCGTGAGCCTGATCGACGGCATCGTGTTCGACGGGCTGACGGACGTGTACAACAAGTTCC ]
[+] EMBL BM652352 [ cCGGCAGCCACCACACACTATCGGACGACACGCGAATTAACCTAA TCAAAGCTCGTCAGTGTCTTCCCTTTT CCGATTCTTTCTGGAGTAATTGTACACATAGTTTTGTCATCACCGCGTGCAACTTCAACATGGTTCTCAA GCTTGCTCAGTTTGCCGGCCGTGCGATCGGTACCCGTGCGCACTACTCCACCTCCGGTAAGCGGCACGACGTGGTGATTGTGGCC GCCACCCGCACCCCTATCGGAAGCTTCCAGAGCAGCCTGTCATCGCTTTCCGCCACCCAGCTCGG TGCG GTCGCGGTCGAGTCGGCGGTGAAGCAGGCGGGCATCGGCAAGGAGGACGTGCAGGAGGTGTACATCGGCAACGTGTGTGCGGCGGGGCTGGGGCAG GCACCGGCCCGTCAGGCCGTCATCTTTGCCGGGCTGCCCAAGTCCACCATCTGCACCACGGTCAACAAGGTGTGCTCGTCCGGCATGAAGAGCGTGATGCTCGGCGCGCAAACGCTGATGCTCGGCCAGCAGGACGTG ATCGTGGCCGGC GGCA TGG AG TCG ATGTCGAACGTGCCGTACT ACCTG AAGCGGGGCAGCACACC GTACGGTGGCGTGAGCCTGATCGA ]
[+] EMBL BM602592 [ ccgCGACACGCGAATTAACCTAA TCAAAGCTCGTCAGTGTCTTCCCTTTT CCGATTCTTTCTGGAGTAATTGTACACATAGTTTTGTCATCACCGCGTGCAACTTCAACATGGTTCTCAA GCTTGCTCAGTTTGCCGGCCGTGCGATCGGTACCCGTGCGCACTACTCCACCTCCGGTAAGCGGCACGACGTGGTGATTGTGGCC GCCACCCGCACCCCTATCGGAAGCTTCCAGAGCAGCCTGTCATCGCTTTCCGCCACCCAGCTCGG TGCG GTCGCGGTCGAGTCGGCGGTGAAGCAGGCGGGCATCGGCAAGGAGGACGTGCAGGAGGTGTACATCGGCAACGTGTGTGCGGCGGGGCTGGGGCAG GCACCGGCCCGTCAGGCCGTCATCTTTGCCGGGCTGCCCAAGTCCACCATCTGCACCACGGTCAACAAGGTGTGCTCGTCCGGCATGAAGAGCGTGATGCTCGGCGCGCAAACGCTGATGCTCGGCCAGCAGGACGTGCATCGTGGCCGGC GGCATTGG AG TCGAATGTCGAACGTGCCGTACTAACCTGAAAGCGGGGCAGCACACCGGTACGGTGGCGTGAGCCTGATCGACGGCATCGTGTTCGACGGGCTGACGGACGTGTACAACAAGTTCCACATGGGCAACTG ]
[+] EMBL AL932578 [ ttnGAATTA CTAACTCAAAGCTCGTCAGTGT TTCCCTTTTCCCGATTCTTTCTGGAGTAATTGTACACATAGTTTTGTCATCACCGCGTGCAACTTCAACATGGTTCTCAACGCTTGCTCAGTTTGCCGGCCGTGCGATCGGTACCCGTGCGCACTACTCCACCTCCGGTAAGCGGCACGACGTGGTGATTGTGGCCTGCCACCCGCACCCCTATCGGAAGCTTCCAGAGCAGCCTGTCATCGCTTTCCGCCACCCAGCTCGGCTGCGNGTCGCGGTCGAGTCGGCGGTGAAGCAGGCGGGCATCGGCAAGGAGGACGTGCAGGAGGTGTACATCGGCAACGTGTGTGCGGCGGGGCTGGGGCAGTGCACCGGCCCGTCAGGCCGTCATCTTTGCCGGGCTGCCCAAGTCCACCATCTGCACCACGGTCAACAAGGTGTGCTCGTCCGGCATGAAGAGCGTGATGCTCGGCGCGCAAACGCTGATGCTCGGCCAGCAGGACGTG ATCGTGGCCGGCTGGCA TGGCAGCTCG ATGTCGAACGTGCCGTACT ACC ]
[+] EMBL BX628141 [ AATTAACCTAA TCAAAGCTCGTCAGTGTCTTCCCTTTT CCGATTCTTTCTGGAGTAATTGTACACATAGTTTTGTCATCACCGCGTGCAACTTCAACATGGTTCTCAA GCTTGCTCAGTTTGCCGGCCGTGCGATCGGTACCCGTGCGCACTACTCCACCTCCGGTAAGCGGCACGACGTGGTGATTGTGGCC GCCACCCGCACCCCTATCGGAAGCTTCCAGAGCAGCCTGTCATCGCTTTCCGCCACCCAGCTCGG TGCG GTCGCGGTCGAGTCGGCGGTGAAGCAGGCGGGCATCGGCAAGGAGGACGTGCAGGAGGTGTACATCGGCAACGTGTGTGCGGCGGGGCTGGGGCAG GCACCGGCCCGTCAGGCCGTCATCTTTGCCGGGCTGCCCAAGTCCACCATCTGCACCACGGTCAACAAGGTGTGCTCGTCCGGCATGAAGAGCGTGATGCTCGGCGCGCAAACGCTGATGCTCGGCCAGCAGGACGTG ATCGTGGCCGGC GGCA TGG AG TCG ATGTCGAACGTGCCGTACT ACCTG AAGCGGGGCAGCACACC GTACGGTGGCGTGAGCCTGATCGACGGCATCGTGTTCGACGGGCTGACGGACGTGTACAACAAGTTCCACATGGGCAACTGTGCGGAAAACACGGCCAAGCAGATGGGCATCACG CGCAAGGACCAGGACGAGTTCGC ]
[+] EMBL BX607552 [ AGTGTCTTCCCTTTT CCGATTCTTTCTGGAGTAATTGTACACATAGTTTTGCCATCACCGCGTGCAACTTCAACATGGTTCTCAA GCTTGCTCAGTTTGCCGGCCGCGCAATCGGTACTCGTGCGCACTACTCCACCTCGGGCAAGCGGCACGACGTGGTGATTGTGGCC GCCACCCGCACTCCAATTGGAAGCTTCCAGAGCAGCCTGTCGTCGCTTTCCGCCACCCAGCTCGG TTCG GTCGCGGTCGAGTCGGCGGTGAAGCAGGCGGGCATCGGCAAGGAGGACGTGCAGGAGGTGTACATCGGCAACGTGTGTGCGGCGGGGCTGTGGCAG GCACCGGCCCGCCAGGCCGTCATCTTTGCCGGGCTGCCCAAGTCCACCATCTGCACCACGGTCAACAAGGTGTGCTCGTCCGGCATGAAGAGCGTAATGCTCGGCGCGCAAACGCTGATGCTCGGCCAGCAGGACGTG ATCGTGGCCGGC GGCA TGG AG TCG ATGTCGAACGTGCCGTACT ACCTG AAGCGGGGCAGCACACC GTACGGTGGCGTGAGCCTGATCGATGGCATCGTGTTCGACGGGCTGACGGACGTGTACAACAAGTTCCACATGGGCAACTGTGCGGAGAACACGGCCAAGCAGATGGGCATCACG CGCAAGGACCAGGACGAGTTCGCCGTCCGCAGCTACCAGCGCAGTGCGGCGGCCTGAGCGGCCAAAGCGTTCGAGGCGGAAATTACGCC ]
[+] EMBL AL694314 [ cccgaggTTTT TCGATTCTTTCTGGAGT ATTGTACACATAGTTTTGTCATCACCGCGTGCAACTTCAACATGGTTCTCAA GCTTGCTCAGTTTGCCGGCCGTGCGATCGGTACCCGTGCGCACTACTCCACCTCCGGTAAGCGGCACGACGTGGTGATTGTGGCC GCCACCCGCACCCCTATCGGAAGCTTCCAGAGCAGCCTGTCATCGCTTTCCGCCACCCAGCTCGG TGCG GTCGCGGTCGAGTCGGCGGTGAAGCAGGCGGGCATCGGCAAGGAGGACGTGCAGGAGGTGTACATCGGCAACGTGTGTGCGGCGGGGCTGGGGC ]
[+] EMBL BX605360 [ AGGTGTACATCGGCAACGTGTGTGCGGCGGGGCTGGGGCAG GCACCGGCCCGCCAGGCCGTCATCTTTGCCGGGCTGCCCAAGTCCACCATCTGCACCACGGTCAACAAGGTGTGCTCGTCCGGCATGAAGAGCGTAATGCTCGGCGCGCAAACGCTGATGCTCGGCCAGCAGGACGTG ATCGTGGCCGGC GGCA TGG AG TCG ATGTCGAACGTGCCGTACT ACCTG AAGCGGGGCAGCACACC GTACGGTGGCGTGAGCCTGATCGATGGCATCGTGTTCGACGGGCTGACGGACGTGTACAACAAGTTCCACATGGGCAACTGTGCGGAGAACACGGCCAAGCAGATGGGCATCACG CGCAAGGACCAGGACGAGTTCGCCGTCCGCAGCTACCAGCGCAGTGCGGCGGCCTGGGCGGCCAAAGCGTTCGAGGCGGAAATTACGCCCGTGCGCATCGCGGGCAAGCGCGGCAAGCCGGACGTGGTCGTGAGCGAGGACGAAGAGTACCGGCGGGTCAACTTTGAC AAGTTCGGGCAGCTGGCGACCGTGTTCCAGCGGGAAAACGGTACCGTCACGGCGGGCAAT ]
[+] EMBL BX610902 [ TGTTCGACGGGCTGACGGACGTGTACAACAAGTTCCACATGGGCAACTGTGCGGAAAACACGGCCAAGCAGATGGGCATCACG CGCAAGGACCAGGACGAGTTCGCCGTCCGCAGCTACCAGCGCAGTGCGGCGGCCTGGGCGGCCAAAGCGTTCGAGGCGGAAATTACGCCCGTGCGCATCGCGGGCAAGCGCGGCAAGCCGGACGTGGTCGTGAGCGAGGACGAGGAGTACCGGCGGGTCAACTTTGAC AAGTTCGGGCAGCTGGCGACCGTGTTCCAGCGGGAAAACGGCACCGTCACGGCGGGCAATGCATCCACGCTGAATGACGGCGCGTCGGCGGTGGTGCTGATGACGGCGGAGGCGGCCGAACGGTTCAAGTGCAAACCGCTCGCCCGGATCGTGGGCTTTGCCGATGCCGAGACGGACCCGATCGACTTCCCGATCGCACCGGCGCTGGCCGTGCCGAAGCTGCTGCAGCAGACGGGCGTCCGGAAGGAGGACGTGGCGATGTGGGAAATCAACGAAGCGTTCTCGCTGGTGGTCGTCGCGAACCAGCGCAAGCTGGACGTCGATCCGGAGAAAGTGAACGTGCACGGTGGGGCCGTCTCGCTCGGGCACCCGATCGGCATGTCCGGCGCGCGGCTG ]
[+] EMBL BM610024 [ ccgACACGGCCAAGCAGATGGGCATCTCGTCGCTAGGACCAGGACGAGTTCGCCGTCCGCAGCTACCAGCGCAGTGCGGCGGCCTGGGCGGCCAAAGCGTTCGAGGCGGAAATTACGCCCGTGCGCATCGCGGGCAAGCGCGGCAAACCGGACGTGGTCGTGAGCGAGGACGAGGAGTACCGGCGGGTCAACTTTGAC AAGTTCGGGCAGCTGGCGACCGTGTTCCAGCGGGAAAACGGCACCGTCACGGCGGGCAATGCATCCACGCTGAATGACGGCGCGTCGGCGGTGGTGC ]
[+] EMBL BX603210 [ ACGGCCAAGCAGATGGGCATCACG CGCAAGGACCAGGACGAGTTCGCCGTCCGCAGCTACCAGCGCAGTGCGGCGGCCTGGGCGGCCAAAGCGTTCGAGGCGGAAATTACGCCCGTGCGCATCGCGGGCAAGCGCGGCAAGCCGGACGTGGTCGTGAGCGAGGACGAAGAGTACCGGCGGGTCAACTTTGACAAAGTTCGGGCAG ]
[+] EMBL BX614130 [ GCAATGCATCCACGCTGAATGACGGCGCGTCGGCGGTGGTGCTGATGACGGCGGAGGCGGCCGAACGGTTCAAGTGCAAACCGCTCGCCCGGATCGTGGGCTTTGCCGATGCCGAGACGGACCCGATCGACTTCCCGATCGCACCGGCGCTGGCCGTGCCGAAGCTGCTGCAGCAGACGGGCGTCCGGAAGGAGGACGTGGCGATGTGGGAAATCAACGAAGCGTTCTCGCTGGTGGTCGTCGCGAACCAGCGCAAGCTGGACGTCGATCCGGAGAAGGTGAACGTGCACGGTGGGGCCGTCTCGCTCGGGCACCCGATCGGCATGTCCGGCGCGCGGCTGGTGACCCATCTGACGCACGCCCTCAAGCCGGGCCAGGTTGGCTGCGCCTCGATCTGCAACGGTGGCGGTGGCGCCTCGTCGATCCTGATCGAAAAACTGTAAGCAACAAACGGGGGTGGGATGACCCACTT ]
[+] EMBL BX612891 [ GCGTCGGCGGTGGTGCTGATGACGGCGGAGTCGGCCGAACGGTTCAAGTGCAAACCGCTCGCCCGGATCGTGGGCTTTGCCGATGCCGAGACGGACCCGATCGACTTCCCGATCGCACCGGCGCTGGCCGTGCCGAAGCTGCTGCAGCAGACGGGCGTCCGGAAGGAGGACGTGGCGATGTGGGAAATCAACGAAGCGTTCTCGCTGGTGGTCGTCGCGAACCAGCGCAAGCTGGACGTCGATCCGGAGAAGGTGAACGTGCACGGTGGGGCCGTCTCGCTCGGGCACCCGATCGGCATGTCCGGCGCGCGGCTGGTGACCCATCTGACGCACGCCCTCAAGCCGGGCCAGGTTGGCTGCGCCTCGATCTGCAACGGTGGCGGTGGCGCCTCGTCGATCCTGATCGAAAAACTGTAAGCAACAAACGGGGGTGGGATGACCCACTTTACCCGCTTTACAAATTACCTCGGAACGTGTGTGTGAGTGTGTTGGTGTGTGGAAGAGAAGTGCCCTCATTTCCCATGATCGGTAAGGGGGAAAAGGGGGCTAGAAATT AAGTGCATTTATTAGAATAGTACGGTCCCCGTAACACCGGTCTCGACCAGGGACCGAAGATGTGCGC ]
[+] EMBL BX617075 [ AAACCGCTCGCCTGGATCGTGGGCTTTGCTGATGCCGAGACGGACCCGATCGACTTCCCGATCGCACCGGCGCTGGCCGTGCCGAAGCTGCTGCAGCAGACGGGCGTCCGGAAGGAGGACGTGGCGATGTGGGAAATCAACGAAGCGTTCTCGCTGGTGGTCGTCGCGAACCAGCGCAAGCTGGACGTCGATCCGGAGAAGGTGAACGTGCACGGTGGGGCCGTCTCGCTCGGGCACCCGATCGGCATGTCCGGCGCGCGGCTGGTGACCCATCTGACGCACGCCCTCAATCCGGGCCAGGTTGGCTGCGCCTCGATCTGCAACGGTGGCGGTGGCGCCTCGTCGATCCTGATCGAAAAACTGTAAGCAACAAACGGGGGTGGGATGACCCACTTTACCCGCTTTACAAATTACCTCGGAACGTGTGTGTGAGTGTGTTGGTGTGTGGAAGAGAAGTGCCCTCATTTCCCATGATCGGTAAGGGGGAAAAGGGGGCGAGAAATTAAAGTGCATTTATTAGAATAGTACGGTCCCCGTAACACCGGTCTCGACCAGGGACCGAAGATGTGCGCAGGCAATATATTTTTCTATGCTACAAGCTGGTTTTAAAATTCAATAAA]
consensusID : consensus_9678#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 684 fasta sequence
[CCGCGGACGCGTGGGCGGACGCGTGCGCGCGAATTAACCTAATCAAAGCTCGGCAGTGTCTTCCCTTTTCCGATTGTTTCTGGAGTAATTGTACACATAGTTTTGTCATCACCGCGTGCAACTTCAACATGGTTCTCAAGCTTGCTCAGTTTGCCGGCCGTGCGATCGGTACCCGCGCGCACTACTCCACCTCGGGCAAGCGGCACGACGTGGTGATTGTGGCCGCCACCCGCACTCCAATTG-GAAGCTTCCAGAGCAGTCTGTCATCGCTTTCCGCCACCCAGCTCGGTGCGGTCGCGGTCGAGTCGGCGGTGAAGCAGGCGGGCATCGGCAAGGAGGACGTGCAGGAGGTGTACATCGGCAACGTATGTGCGGGCAGGGGCTGGGGGCAGGCTCCGGCCCCGCCAGGCCGTCATCTTTGCCGGGCTGCCCAAGTCCACCATCTGCACCACGGTTTAACAAGGTGTGCTCGTCCGGCATGAAGAGCGTAATGCTCGGCGCACAAACGCTGATGCTCGGCCAGCAGGAACGTGCATCGTGGCCGGCGGCATTGGAGTCGATGTCGAACGTGCCGTACTAACCTGAAGCGGGGCAGCACACCGGTACGGTGGCGTGAGCCTGATCGAACGGCATCGTGTTCGACGGGCTTGACGGACGTGTACAACAAGTTCCACATGGGCAACT]
[+] EMBL BM608099 [CCGCGGACGCGTGGGCGGACGCGTGGGCGCGAATTAACCTAATCAAAGCTCGGCAGTGTCTTCCCTTTTCCGATTGTTTCTGGAGTAATTGTACACATAGTTTTGTCATCACCGCGTGCAACTTCAACATGGTTCTCAAGCTTGCTCAGTTTGCCGGCCGTGCGATCGGTACCCGCGCGCACTACTCCACCTCGGGCAAGCGGCACGACGTGGTGATTGTGGCCGCCACCCGCACTCCAATTG GAAGCTTCCAGAGCAGTCTGTCATCGCTTTCCGCCACCCAGCTCGGTGCGGTCGCGGTCGAGTCGGCGGTGAAGCAGGCGGGCATCGGCAAGGAGGACGTGCAGGAGGTGTACATCGGCAACGTATGTGCGGGCAGGGGCTGGGGGCAGGCTCCGGCCCCGCCAGGCCGTCATCTTTGCCGGGCTGCCCAAGTCCACCATCTGCACCACGGTTTAACAAGGTGTGCTCGTCCGGCATGAAGAGCGTAATGCTCGGCGCACAAACGCTGATGCTCGGCCAGCAGGAACGTGCATCGTGGCCGGCGGCATTGGAGTCGATGTCGAACGTGCCGTACTAACCTGAAGCGGGGCAGCACACCGGTACGGTGGCGTGAGCCTGATCGAACGGCATCGTGTTCGACGGGCTTGACGGACGTGTACAACAAGTTCCACATGGGCAACT]
[+] EMBL BM644720 [ cCGCG ACACGCGAATTAACCTAATCAAAGCTCGGCAGTGTCTTCCCTTTTCCGATTGTTTCTGGAGTAATTGTACACATAGTTTTGTCATCACCGCGTGCAACTTCAACATGGTTCTCAAGCTTGCTCAGTTTGCCGGCCGTGCGATCGGTACCCGCGCGCACTACTCCACCTCGGGCAAGCGGCACGACGTGGTGATTGTGGCCGCCACCCGCACTCCAATTGAGAAGCTTCCAGAGCAGTCTGTCATCGCTTTCCGCCACCCAGCTCGGTGCGGTCGCGGTCGAGTCGGCGGTGAAGCAGGCGGGCATCGGCAAGGAGGACGTGCAGGAGGTGTACATCGtg ]
[+] EMBL BM581618 [ cCGCGCGAATTAACCTAATCAAAGCTCGGCAGTGTCTTCCCTTTTCCGATTGTTTCTGGAGTAATTGTACACATAGTTTTGTCATCACCGCGTGCAACTTCAACATGGTTCTCAAGCTTGCTCAGTTTGCCGGCCGTGCGATCGGTACCCGCGCGCACTACTCCACCTCGGGCAAGCGGCACGACGTGGTGATTGTGGCCGCCACCCGCACTCCAATTG GAAGCTTCCAGAGCAGTCTGTCATCGCTTTCCGCCACCCAGCTCGGTGCGGTCGCGGTCGAGTCGGCGGTGAAGCAGGCGGGCATCGGCAAGGAGGACGTGCAGGAGGTGTACATCGGCAACGTATGTGC GGCA GGGCT GGGGCAGGCTCCGG CCCGCCAGGCCGTCATCTTTGCCGGGCTGCCCAAGTCCACCATCTGCACCACGG TTAACAAGGTGTGCTCGTCCGGCATGAAGAGCGTAATGCTCGGCGCACAAACGCTGATGCTCGGCCAGCAGG ACGTG ATCGTGGCCGGCGGCATTGGAGTCGATGTCGAACGTGCCGTACT ACCTGAAGCGGGGCAGCACACCGGTACGGTGGCGTGAGCCTGATCG ACGGCATCGTGTTCGACGGGC TGACGGACGTGTACAACAAGTTCCACATGGGCA ]
consensusID : consensus_9678#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 528 fasta sequence
[AGATTGGCCGAGCAGTGTCTTCCTTTTCCGATTCTTTCTGGAGTAATTGTACACATAGTTTTGTCATCACCGCGTGCAACTTCAACATGGTTCTCAAGCTTGCTCAGTTTGCCGGCCGTGCGATCGGTACCCGTGCGCACTACTCCACCTCCGGTAAGCGGCACGACGTGGTGATTGTGGCGCACCGCACCCTATCGGAAGCTTCCAGAGCAGCTGTCATCGCTTTCCGGCACCAGTCGGTGCGGTCGCGGTCGAGTCGGGGTGAAGCAGGCGGGCATCGGCCAAGGAGGACGTGCAGGAGGTGTACATCGGGCAACGTGTGTGCGGCGGGGCTGGGCAGGCACCGGCCGTCAGGCCGTCATCTTTGCGGGCTGCCAAGTNCACCATCTGACCACAGGTCAACAAAGGTGTGCTCGTCCGGCATGAAGAGCGTGATGCATCGGGCGCAAACGCTGATGCTCGGCCAGCAGGACAGTGATCGTGGGCCGGCGGATGGAGTCNATGTCGAACGTGCCGTAACTACCTTGA]
[+] EMBL AL695995 [AGATTGGCCGAGCAGTGTCTTCCTTTTCCGATTCTTTCTGGAGTAATTGTACACATAGTTTTGTCATCACCGCGTGCAACTTCAACATGGTTCTCAAGCTTGCTCAGTTTGCCGGCCGTGCGATCGGTACCCGTGCGCACTACTCCACCTCCGGTAAGCGGCACGACGTGGTGATTGTGGCGCACCGCACCCTATCGGAAGCTTCCAGAGCAGCTGTCATCGCTTTCCGGCACCAGTCGGTGCGGTCGCGGTCGAGTCGGGGTGAAGCAGGCGGGCATCGGCCAAGGAGGACGTGCAGGAGGTGTACATCGGGCAACGTGTGTGCGGCGGGGCTGGGCAGGCACCGGCCGTCAGGCCGTCATCTTTGCGGGCTGCCAAGTNCACCATCTGACCACAGGTCAACAAAGGTGTGCTCGTCCGGCATGAAGAGCGTGATGCATCGGGCGCAAACGCTGATGCTCGGCCAGCAGGACAGTGATCGTGGGCCGGCGGATGGAGTCNATGTCGAACGTGCCGTAACTACCTTGA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9678#0 CCGGAGCAGAATGTTACGTCGCCGTCGGCAGCCACCACACACTATCGGACGACACGCGAA 60
consensus_9678#2 ------------------------------------------------------------
consensus_9678#1 ---------------------------CCGCGGACGCGTGGGCGGACGCGTGCGCGCGAA 33
consensus_9678#0 TTAACCTAATCAAAGCTCGTCAGTGTCTTCCCTTTTCCGATTCTTTCTGGAGTAATTGTA 120
consensus_9678#2 --------AGATTGGCCGAGCAGTGTCTTCC-TTTTCCGATTCTTTCTGGAGTAATTGTA 51
consensus_9678#1 TTAACCTAATCAAAGCTCGGCAGTGTCTTCCCTTTTCCGATTGTTTCTGGAGTAATTGTA 93
* ** *********** ********** *****************
consensus_9678#0 CACATAGTTTTGTCATCACCGCGTGCAACTTCAACATGGTTCTCAAGCTTGCTCAGTTTG 180
consensus_9678#2 CACATAGTTTTGTCATCACCGCGTGCAACTTCAACATGGTTCTCAAGCTTGCTCAGTTTG 111
consensus_9678#1 CACATAGTTTTGTCATCACCGCGTGCAACTTCAACATGGTTCTCAAGCTTGCTCAGTTTG 153
************************************************************
consensus_9678#0 CCGGCCGTGCGATCGGTACCCGTGCGCACTACTCCACCTCCGGTAAGCGGCACGACGTGG 240
consensus_9678#2 CCGGCCGTGCGATCGGTACCCGTGCGCACTACTCCACCTCCGGTAAGCGGCACGACGTGG 171
consensus_9678#1 CCGGCCGTGCGATCGGTACCCGCGCGCACTACTCCACCTCGGGCAAGCGGCACGACGTGG 213
********************** ***************** ** ****************
consensus_9678#0 TGATTGTGGCCGCCACCCGCACCCCTATCGGAAGCTTCCAGAGCAGCCTGTCATCGCTTT 300
consensus_9678#2 TGATTGTGGCG--CACC-GCACCC-TATCGGAAGCTTCCAGAGCAGC-TGTCATCGCTTT 226
consensus_9678#1 TGATTGTGGCCGCCACCCGCACTCCAATTGGAAGCTTCCAGAGCAGTCTGTCATCGCTTT 273
********** **** **** * ** ***************** ************
consensus_9678#0 CCGCCACCCAGCTCGGTGCGGTCGCGGTCGAGTCGGCGGTGAAGCAGGCGGGCATCGGC- 359
consensus_9678#2 CCGGCACCAG--TCGGTGCGGTCGCGGTCGAGTCGG-GGTGAAGCAGGCGGGCATCGGCC 283
consensus_9678#1 CCGCCACCCAGCTCGGTGCGGTCGCGGTCGAGTCGGCGGTGAAGCAGGCGGGCATCGGC- 332
*** **** ************************ **********************
consensus_9678#0 AAGGAGGACGTGCAGGAGGTGTACATCGG-CAACGTGTGTGCGGC--GGGGCTGGGG-CA 415
consensus_9678#2 AAGGAGGACGTGCAGGAGGTGTACATCGGGCAACGTGTGTGCGGC--GGGGCTGGG--CA 339
consensus_9678#1 AAGGAGGACGTGCAGGAGGTGTACATCGG-CAACGTATGTGCGGGCAGGGGCTGGGGGCA 391
***************************** ****** ******* ********* **
consensus_9678#0 GGCACCGGCCC-GCCAGGCCGTCATCTTTGCCGGGCTGCCCAAGTCCACCATCTGCACCA 474
consensus_9678#2 GGCACCGGCC--GTCAGGCCGTCATCTTTGC-GGGCTGCC-AAGTNCACCATCTG-ACCA 394
consensus_9678#1 GGCTCCGGCCCCGCCAGGCCGTCATCTTTGCCGGGCTGCCCAAGTCCACCATCTGCACCA 451
*** ****** * ***************** ******** **** ********* ****
consensus_9678#0 C-GGTCAACAA-GGTGTGCTCGTCCGGCATGAAGAGCGTAATGCTCGGCGCGCAAACGCT 532
consensus_9678#2 CAGGTCAACAAAGGTGTGCTCGTCCGGCATGAAGAGCGTGATGCATCGGGCGCAAACGCT 454
consensus_9678#1 CGGTTTAACAA-GGTGTGCTCGTCCGGCATGAAGAGCGTAATGCTCGGCGCACAAACGCT 510
* * * ***** *************************** **** * ** ********
consensus_9678#0 GATGCTCGGCCAGCAGGAC-GTG-ATCGTGG-CCGGCGGCAT-GGAGTCGATGTCGAACG 588
consensus_9678#2 GATGCTCGGCCAGCAGGACAGTG-ATCGTGGGCCGGCGG-AT-GGAGTCNATGTCGAACG 511
consensus_9678#1 GATGCTCGGCCAGCAGGAACGTGCATCGTGG-CCGGCGGCATTGGAGTCGATGTCGAACG 569
****************** *** ******* ******* ** ****** **********
consensus_9678#0 TGCCGTA-CTACCTGAAGCGGGGCAGCACACCG-TACGGTGGCGTGAGCCTGATCGA-TG 645
consensus_9678#2 TGCCGTAACTACCTTGA------------------------------------------- 528
consensus_9678#1 TGCCGTACTAACCTGAAGCGGGGCAGCACACCGGTACGGTGGCGTGAGCCTGATCGAACG 629
******* **** *
consensus_9678#0 GCATCGTGTTCGACGGGCT-GACGGACGTGTACAACAAGTTCCACATGGGCAACTGTGCG 704
consensus_9678#2 ------------------------------------------------------------
consensus_9678#1 GCATCGTGTTCGACGGGCTTGACGGACGTGTACAACAAGTTCCACATGGGCAACT----- 684
consensus_9678#0 GAAAACACGGCCAAGCAGATGGGCATCACGCGCAAGGACCAGGACGAGTTCGCCGTCCGC 764
consensus_9678#2 ------------------------------------------------------------
consensus_9678#1 ------------------------------------------------------------
consensus_9678#0 AGCTACCAGCGCAGTGCGGCGGCCTGGGCGGCCAAAGCGTTCGAGGCGGAAATTACGCCC 824
consensus_9678#2 ------------------------------------------------------------
consensus_9678#1 ------------------------------------------------------------
consensus_9678#0 GTGCGCATCGCGGGCAAGCGCGGCAAGCCGGACGTGGTCGTGAGCGAGGACGAAGAGTAC 884
consensus_9678#2 ------------------------------------------------------------
consensus_9678#1 ------------------------------------------------------------
consensus_9678#0 CGGCGGGTCAACTTTGACAAGTTCGGGCAGCTGGCGACCGTGTTCCAGCGGGAAAACGGC 944
consensus_9678#2 ------------------------------------------------------------
consensus_9678#1 ------------------------------------------------------------
consensus_9678#0 ACCGTCACGGCGGGCAATGCATCCACGCTGAATGACGGCGCGTCGGCGGTGGTGCTGATG 1004
consensus_9678#2 ------------------------------------------------------------
consensus_9678#1 ------------------------------------------------------------
consensus_9678#0 ACGGCGGAGGCGGCCGAACGGTTCAAGTGCAAACCGCTCGCCCGGATCGTGGGCTTTGCC 1064
consensus_9678#2 ------------------------------------------------------------
consensus_9678#1 ------------------------------------------------------------
consensus_9678#0 GATGCCGAGACGGACCCGATCGACTTCCCGATCGCACCGGCGCTGGCCGTGCCGAAGCTG 1124
consensus_9678#2 ------------------------------------------------------------
consensus_9678#1 ------------------------------------------------------------
consensus_9678#0 CTGCAGCAGACGGGCGTCCGGAAGGAGGACGTGGCGATGTGGGAAATCAACGAAGCGTTC 1184
consensus_9678#2 ------------------------------------------------------------
consensus_9678#1 ------------------------------------------------------------
consensus_9678#0 TCGCTGGTGGTCGTCGCGAACCAGCGCAAGCTGGACGTCGATCCGGAGAAGGTGAACGTG 1244
consensus_9678#2 ------------------------------------------------------------
consensus_9678#1 ------------------------------------------------------------
consensus_9678#0 CACGGTGGGGCCGTCTCGCTCGGGCACCCGATCGGCATGTCCGGCGCGCGGCTGGTGACC 1304
consensus_9678#2 ------------------------------------------------------------
consensus_9678#1 ------------------------------------------------------------
consensus_9678#0 CATCTGACGCACGCCCTCAAGCCGGGCCAGGTTGGCTGCGCCTCGATCTGCAACGGTGGC 1364
consensus_9678#2 ------------------------------------------------------------
consensus_9678#1 ------------------------------------------------------------
consensus_9678#0 GGTGGCGCCTCGTCGATCCTGATCGAAAAACTGTAAGCAACAAACGGGGGTGGGATGACC 1424
consensus_9678#2 ------------------------------------------------------------
consensus_9678#1 ------------------------------------------------------------
consensus_9678#0 CACTTTACCCGCTTTACAAATTACCTCGGAACGTGTGTGTGAGTGTGTTGGTGTGTGGAA 1484
consensus_9678#2 ------------------------------------------------------------
consensus_9678#1 ------------------------------------------------------------
consensus_9678#0 GAGAAGTGCCCTCATTTCCCATGATCGGTAAGGGGGAAAAGGGGGCTAGAAATTAAGTGC 1544
consensus_9678#2 ------------------------------------------------------------
consensus_9678#1 ------------------------------------------------------------
consensus_9678#0 ATTTATTAGAATAGTACGGTCCCCGTAACACCGGTCTCGACCAGGGACCGAAGATGTGCG 1604
consensus_9678#2 ------------------------------------------------------------
consensus_9678#1 ------------------------------------------------------------
consensus_9678#0 CAGGCAATATATTTTTCTATGCTACAAGCTGGTTTTAAAATTCAATAAA 1653
consensus_9678#2 -------------------------------------------------
consensus_9678#1 -------------------------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||