These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9684#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 14 consensus length = 1443 fasta sequence [TAATCAACCCAACCGATCGAACTACCTCAGCTCAGCACGGTGGCTAAGCAGCGCAAAGTCCCTTCGTCACGCGTCGCACGACTCGCCTCGTTCGGTGGCCTGTTTGCCGGACTCGGTCTGGGCACGGTGAACGAGCTAGCGAAGGGTGCCCTCGGCATTGGCGGAAC-CTGGATGTGAAGCAGGCCCTGTTCAGTCCGACCAACGCGGAACGCATCGTCGACACGCTGTGCAAGGTGCGGGGCGCCGCCCTGAAGCTGGGCCAGATTCTGAGCATTCAGGATTCGAACATCGTTTCGCCGCAGCTGGTGAAAGCGTTCGAGCGTGTCCGGCAGGCGGCCGATTACATGCCGGACTGGCAGGTGGAGCGGCAGCTCGTCAGCGAGCTCGGCCCCGATTGGCGCTCCAAGCTGCAGAGCTTCGACCAGAAACCGTTTGCGGCCGCCTCGATCGGCCAGGTGCATCGGGGCGTACTGAAGGACGGTGGCATGGAGGTGGCCATCAAGATCCAGTACCCGGGGGTGGCGAAAAGCATCGAAAGCGACATCGACAATCTCGTCTCGATGCTGAAGGTGTGGGACGTGTT-TCCGGCCGGCGTGTTCATCGAC-AACGTGGTCGCGGTGGCCAAGCGCGAGCTGGCCT-GGGAGGTGGATTACACG-CGCGAGGCCGAGTACA-CGGAGCGGTTCGCGGAAATGATACGCCACATGCCGGAGTACCGTGTGCCGCGCGTGGTAAAGGAGCTGACCTCAAAG-AATGTACTGACGACGGAGCTCGTACCGGGCGTACCGATGGATCGGTGCTTCGACATGAGCCA-AGAACA-TCG-TGATCACAT-TGCGT-ACTGCGT-GATGAAGCTCT-GCCTGAACGAGCTGTTCACCTT-CCGG-TGCATGCAAACGGACCCGAACTGGTCCAACTTCCTGTACGACGCGTCGACGAAGCAGGTGATGCTGATCGATTTCGGCGCGACACGCTTCTACCAGAAGGCATTCATGGACGATTACTTAAGGGTCATTATTGCGGCGACGAAAAACGACCGCCAGCAGATACTGGAGCTGTCGCGCAAGATGGGCTTCCTGACCGGCTACGAAACGCCCGCCATGGAGAAGGCCCACGTCGACGCCGTGCTCATCCTCGGCGAAGTGTTCAGCGTGCCGGGCGAGTTCGAGTTCGGTCGGCAGAGCACGACGAAGAAGATTGCCGCCCTGGTGCCGGTAATGATTGCGCATCGGCTCTGCCCGCCGCCGGAAGAGATCTACTCGCTGCACCGGAAGCTTTCCGGTGTGTTTTTGCTGTGCGCGCGGCTCAACGCGAAGATCGACTGTAAGCCTATCTTTAACGAGGTGATGCAGAATTACAAGTTTGACTAAAAACCATTCAGTACAAGGCTGTTGCCGGGCAATAAAGCAACCTGACTAAACGATCCGATTAACACAGCCCACGCGTCCGCGG] [+] EMBL CNS08TQF [TAATCAACCCAACCGATCGAACTACCTCAGCTCAGCACGGTGGCTAAGCAGCGCAAAGTCCCTTCGTCACGCGTCGCACGACTCGCCTCGTTCGGTGGCCTGTTTGCCGGACTCGGTCTGGGCACGGTGAACGAGCTAGCGAAGGGTGCCCTCGGCATTGGCGGAAC CTGGATGTGAAGCAGGCCCTGTTCAGTCCGACCAACGCGGAACGCATCGTCGACACGCTGTGCAAGGTGCGGGGCGCCGCCCTGAAGCTGGGCCAGATTCTGAGCATTCAGGATTCGAACATCGTTTCGCCGCAGCTGGTGAAAGCGTTCGAACGTGTCCGGCAGGCGGCCGATTACATGCCGGACTGGCAGGTGGAGCGGCAGCTCGTCAGCGAGCTCGGCCCCGATTGGCGCTCCAAGCTGCAGAGCTTCGACCAGAAACCGTTTGCGGCCGCCTCGATCGGCCAGGTGCATCGGGGCGTACTGAAGGACGGTGGCATGGAGGTGGCCATCAAGATCCAGTACCCGGGGGTGGCGAAAAGCATCGAAAGCGACATCGACAATCTCGTCTCGATGCTGAAGGTGTGGGACGTGTT TCCGGCCGGCGTGTTCATCGAC AACGTGGTCGCGGTGGCCAAGCGCGA CTGGCCTGGGGAGGTGGATTACACG CGCGAGGCCGAGTACA CGGAGCGGTTCGCGGAAATGATACGCCACATGCCGGAGTACCGTGTGCCGCGCGTGGTAAAGGAGCTGACCTCAAAG AATGTACTGACGACGGAGCTCGTACCGGGCGTACCGATGGATCGGTGCTTCGACATGAGCCA AGAACA TCG TGATCACAT TGCGT ACTGCGT GATGAAGCTCT GCCTGAACGAGCTGTTCACCTT CCGG TGCATGCAAACGGACCCGAACTGGTCCAACTTCCTGTACGACGCGTCGACGAAGCAGGTGATGCTG ] [+] EMBL AGA285622 [ cCAGCACAACCGATCGAACTACCTCAGCTCAGCACGGTGGCCAAGCAGCGCAAAGTCCCTTCGTCACGCGTCGCACGACTCGCCTCGTTCGGTGGCCTGTTTGCCGGACTCGGTCTGGGCACGGTGAACGAGCTAGCGAAGGGTGCCCTCGGCATTGGCGGAACGCTGGATGTGAAGCAGGCCCTGTTCAGTCCGACCAACGCGGAACGCATCGTCGACACGCTGTGCAAGGTGCGGGGCGCCGCCCTGAAGCTGGGCCAGATTCTGAGCATTCAGGATTCGAACATCGTTTCGCCGCAGCTGGTGAAAGCGTTCGAGCGTGTCCGGCAGGCGGCCGATTACA ] [-] EMBL AGA284320 [ GGTGAACGAGCTAGCGAAGGGTGCCCTCGGCATTGGCGGAACGCTGGATGTGAAGCAGGCCCTGTTCAGTCCGACCAACGCGGAACGCATCGTCGACACGCTGTGCAAGGTGCGGGGCGCCGCCCTGAAGCTGGGCCAGATTCTGAGCATTCAGGATTCGAACATCGTTTCGCCGCAGCTGGTGAAAGCGTTCGAGCGTGTCCGGCA GATTACATGCCGGACTGGCAGGTGGAGCGGCAGCTCGTCAGCGAGCTCGGCCCCGATTGGCGCTCCAAGCTGCAGAGCTTCGACCAG ] [+] EMBL AGA284012 [ CCAGGTGCATCGGGGCGTACTGAAGGACGGTGGCATGGAGGTGGCCATCAAGATCCAGTACCCGGGGGTGGCGAAAAGCATCGAAAGCGACATCGACAATCTCGTCTCGATGCTGAAGGTGTGGGACGTGTT TCCGGCCGGCGTGTTCATCGAC AACGTGGTCGCGGTGGCCAAGCGCGAGCTGGCCT GGGAGGTGGATTACACG CGCGAGGCCGAGTACA CGGAGCGGTTCGCGGAAATGATACGCCACATGCCGGAGTACCGGGTGCCGCGCGTGGTAAAGGAGCTGACGTCGAAG AATGTACTGACGACGGAGCTTGTACCGGGCGTACCGATGGATCGGTGCTTCGACATGAGCCA AGAACA CCG TGATCACAT TGCGT ACTGCGT GATGAAGCTCT GCCTGAACGAGCTGTTCACCTTCCCGG TGCATGCAAACGGACCCGAACTGGTCCAACTTCCTGTACGACGCGTCGACGAAGCAAGTGATGCTGATCGATTTCGGCGCGACACGCTTCTACCAGAA ] [+] EMBL AGA280897 [ CCAGGTGCATCGGGGCGTACTGAAGGACGGTGGCATGGAGGTGGCCATCAAGATCCAGTACCCGGGGGTGGCGAAAAGCATCGAAAGCGACATCGACAATCTCGTCTCGATGCTGAAGGTGTGGGACGTGTT TCCGGCCGGCGTGTTCATCGAC AACGTGGTCGCGGTGGCCAAGCGCGAGCTGGCCT GGGAGGTGGATTACACG CGCGAGGCCGAGTACA CGGAGCGGTTCGCGGAAATGATACGCCACATGCCGGAGTACCGTGTGCCGCGCGTGGTAAAGGAGCTGACCTCAAAG AATGTACTGACGACGGAGCTCGTACCGGGCGTACCGATGGATCGGTGCTTCGACATGAGCCA AGAACA TCG TGATCACAT TGCGT ACTGCGT GATGAAGCTCT GCCTGAACGAGCTGTTCACCTT CCGG TGCATGCAAACGGACCCGAACT ] [+] EMBL AGA280108 [ CCAGGTGCATCGGGGCGTACTGAAGGACGGTGGCATGGAGGTGGCCATCAAGATCCAGTACCCGGGGGTGGCGAAAAGCATCGAAAGCGACATCGACAATCTCGTCTCGATGCTGAAGGTGTGGGACGTGTT TCCGGCCGGCGTGTTCATCGA ] [-] EMBL CNS08TQG [ AGATCCAGTACCCGGGGGTGGCGAAAAGCATCGAAAGCGACATCGAAAATCTCGTCTCGATGCTGAAGGTGTGGGACGTGTT TCCGGCCGGCGTGTTCATCGAC AACGTGGTCGCGGTGGCCAAGCGCGAGCTGGCCT GGGAGGTGGATTAAACG CGCGAGGCCGAGTACA CGGAGCGGTTCGCGGAAATGATACGCCACATGCCGGAGTACCGTGTGCCGCGCGTGGTAAAGGAGCTGACCTCAAAG AATGTACTGACGACGGAGCTCGTACCGGGCGTACCGATGGATCGGTGCTTCGACATGAGCCA AGAACA TCG TGATCACAT TGCGT ACTGCGT GATGAAGCTCT GCCTGAACGAGCTGTTCACCTT CCGG TGCATGCAAACGGACCCGAACTGGTCCAACAAAATGTACGACGCGTCGACGAAGCAGGTGATGCTGATCGATTTCGGCGCGACACGCTTCTACCAGAAGGCATTCATGGACGATTACTTAAGGGTCATTATTGCGGCGACGAAAAACGACCGCCAGCAGATACTGGAGCTGTCGCGCAAGATGGGCTTCCTGACCGGCTACGAAACGCCCGCCATGGAGAAGGCCCACGTCGACGCCGTGCTCATCCTCGGCGAAGTGTTCAGCGTGCCGGGCGAGTTCGAGTTCGGTCGGCAGAGCACGACGAAGAAGATTGCCGCCCTGGTGCCGGTAATGATTGCGCATCGGCTCTGCCCGCCGCCGGAAGAGATCTACTCGTTGCACCGGAAGCTTTCCGGTGTGTTTTTGCTGTGCGCGCGGCTCAACGCGAAGATCGACTGTAAGCCTATCTTTAACGAGGTGATGCAGAATTACAAGTTTGACTAAAAACCATTCAGTACAAGGCTGTTGCCGGGCAATAAAGCAACCTGACT ] [+] EMBL BX624281 [ ACAATCTCGTCTCGATGCTGAAGGTGTGGGACGTGTTCTCCGGCCGGCGTGTTCATCGACNAACGTGGTCGCGGTGGCCAAGCGCGAGCTGGCCT GGGAGGTGGATTACACGNCGCGAGGCCGAGTACATCGGAGCGGTTCGCGGAAATGATACGCCACATGCCGGAGTACCGGGTGCCGCGCGTGGTAAAGGAGCTGACGTCGAAGNAATGTACTGACGACGGAGCTTGTACCGGGCGTACCGATGGATCGGTGCTTCGACATGAGCCAGAGAACANCCGATGATCACATGNGCGTNACTGCGTNGATGAAGCTCTGGCCTGAACGAGCTGTTCACCTT CCGGNNGCATGCCAACGGACCCGAAC ] [+] EMBL BX617807 [ GCCACATGCCGGAGTACCGTGTGCCGCGCGTGGTAAAGGAGCTGACCTCAAAG AATGTACTGACGACGGAGCTCGTACCGGGCGTATCGATGGATCGGTGCTTCGACATGAGCCA AGAACA TCG TGATCACAT TGCGT ACTGCGT GATGAAGCTCT GCCTGAACGAGCTGTTCACCTT CCGG TGCATGCAAACGGACCCGAACTGGTCCAACTTCCTGTACGACGCGTCGACGAAGCAGGTGATGCTGATCGATTTCGGCGCGACACGCTTCTACCAGAAGGCATTCATGGACGATTACTTAAGGGTCATTATTGCGGCGACGAAAAACGACCGCCAGCAGATACTGGAGCTGTCGCGCAAGATGGGCTTCCTGACCGGCTACGAAACGCCCGCCATGGAGAAGGCCCACGTCGACGCCGTGCTCATCCTCGGCGAAGTGTTCAGCGTGCCCGGCGAGTTCGA ] [+] EMBL BX608337 [ TGTACTGACGACGGAGCTCGTACCGGGCGTATCGATGGATCGGTGCTTCGACATGAGCCA AGAACA TCG TGATCACAT TGCGT ACTGCGT GATGAAGCTCT GCCTGAACGAGCTGTTCACCTT CCGG TGCATGCAAACGGACCCGAACTGGTCCAACTTCCTGTACGACGCGTCGACGAAGCAGGTGATGCTGATCGATTTCGGCGCGACACGCTTCTACCAGAAGGCATTCATGGACGATTACTTAAGGGTCATTATTGCGGCGACGAAAAACGACCGCCAGCAGATACTGGAGCTGTCGCGCAAGATGGGCTTCCTGACCGGCTACGAAACGCCCGCCATGGAGAAGGCCCACGTCGACGCCGTGCTCATCCTCGGCGAAGTGTTCAGCGTGCCGGGCGAGTTCGAGTTCGGTCGGCAGAGCACGACGAAGAAGATTGCCGCCCTGGTGCCGGTAATGATTGCGCATCGGCTCTGCCCGCCGCCGGAAGAGATCTACTCGCTGCACCGGAAGCTTTCCGGTGTGTTTTTGCTGTGCGCGCGGCTCAACGCGAAGATCGACTGTAAGCCTATCTTTAACGAGGTGATGCAGAATTACAAGTTTGACTAAAAACCATTCAGTACAAGGCTGTTGCCGGGCAATAAAGCAACCTGACTAAA ] [-] EMBL BM603144 [ CA TCG TGATCACAT TGCGT ACTGCGT GATGAAGCTCT GCCTGAACGAGCTGTTCACCTT CCGG TGCATGCAAACGGACCCGAACTGGTCCAACTTCCTGTACGACGCGTCGACGAAGCAGGTGATGCTGATCGATTTCGGCGCGACACGCTTCTACCAGAAGGCATTCATGGACGATTACTTAAGGGTCATTATTGCGGCGACGAAAAACGACCGCCAGCAGATACTGGAGCTGTCGCGCAAGATGGGCTTCCTGACCGGCTACGAAACGCCCGCCATGGAGAAGGCCCACGTCGACGCCGTGCTCATCCTCGGCGAAGTGTTCAGCGTGCCGGGCGAGTTCGAGTTCGGTCGGCAGAGCACGACGAAGAAGATTGCCGCCCTGGTGCCGGTAATGATTGCGCATCGGCTCTGCCCGCCGCCGGAAGAGATCTACTCGCTGCACCGGAAGCTTTCCGGTGTGTTTTTGCTGTGCGCGCGGCTCAACGCGAAGATCGACTGTAAGCCTATCTTTAACGAGGTGATGCAGAATTACAAGTTTGACTAAAAACCATTCAGTACAAGGCTGTTGCCGGGCAATAAAGCAACCTGACTAAACGATCCGATTAACACAGCCCACGCGTCCGCGG] [-] EMBL AGA282525 [ CGAAGCAGGTGATGCTGATCGATTTCGGCGCGACACGCTTCTACCAGAAGGCATTCATGGACGATTACTTAAGGGTCATTATTGCGGCGACGAAAAACGACCGCCAGCAGATACTGGAGCTGTCGCGCAAGATGGGCTTCCTGACCGGCTACGAAACGCCCGCCATGGAGAAGGCCCACGTCGACGCCGTGCTCATCCTCGGCGAAGTGTTCAGCGTGCCGGGCGAGTTCGAGTTCGGTCGGCAGAGCACGACGAAGAAGATTGCCGCCCTGGTGCCGGTAATGATTGCGCATCGGCTCTGCCCGCCGCCGGAAGAGATCTACTCGCTGCACCGGAAGCTTTCCGGTGTGTTTTTGCTGTGCGCGCGGCTCAACGCGAAGATCGACTGTAAGCCTATCTTTAACGAGGTGATGCAGAATTACAAGTTTGACTAAAAACCATTCAGTACAAG ] [-] EMBL AGA285307 [ AGATACTGGAGCTGTCGCGCAAGATGGGCTTCCTGACCGGCTACGAAACGCCCGCCATGGAGAAGGCCCACGTCGACGCCGTGCTCATCCTCGGCGAAGTGTTCAGCGTGCCGGGCGAGTTCGAGTTCGGTCGGCAGAGCACGACGAAGAAGATTGCCGCCCTGGTGCCGGTAATGATTGCGCATCGGCTCTGCCCGCCGCCGGAAGAGATCTACTCGCTGCACCGGAAGCTTTCCGGTGTGTTTTTGCTGTGCGCGCGGCTCAACG ] [-] EMBL AGA281806 [ TGCCGGGCGAGTTCGAGTTCGGTCGGCAGAGCACGACGAAGAAGATTGCCGCCCTGGTGCCGGTAATGATTGCGCATCGGCTCTGCCCGCCGCCGGAAGAGATCTACTCGCTGCACCGGAAGCTTTCCGGTGTGTTTTTGCTGTGCGCGCGGCTCAACGCGAAGATCGACTGTAAGCCTATCTTTAACGAGGTGATGCAGAATTACAAGTTTGACTAAAAACCATTCAGTACAAGGC ] consensusID : consensus_9684#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 891 fasta sequence [CATGTTTATTATCTAATCGTCAGTATCATGTTGTGAAATAAGAAACTATCGAGCGCTGTTTTATCGAATCTTTACCACAATTAAGTTTTGTTAAGTGCAAAAGTTTGTGTAACTTATACTAGTCTAAAAGTGCTTCTTATCTTACCCTCACCCTCACATACACAATGTCCCGCGCACAAGACGCCATCGGTATTCTGCGGGGGCTCAAGATAGTGGCCGATGCCGTTGGCAAATCGCAATCCGAGTACGCCAAACATCTGTGGGCCAATTCGAGTGTGCGGGAGGTGCTGGAGCAGCAGCTAGCGACCGGCGAGCAGTCGGTAAAGCAGGTGCTGAACAATCCAACCCAGGAGCTGGAAAAGGTTGGTGGCAAGCTGCGCGAAACGATCGAGCGGACGGCGGTTGTGGCGGAAGGCCTCCGGCAGCTGACCGCAGCGGCTATACCGAAAGTGGGTCCACTTTCGCCGGATGCATTTCTGAACCAGCGTATTCCGTCCGCTGGAACCGTTGCCCCACCCGGGTCGGAACCCTCGGGAGATATAGCCAGCCTGGACATTTCCAAGATTACCCTGAAGGAGCTGGAATCGATACTGTCCGAGCACAGCAAAACTCGCGAGATAAAGCTAGGCTTAGACAACGGGAAACGATCCACCGCAAAGCATGTGGAACCGATCGTTGCAACAGAAAGCCCAGCGATGGCAGCAGAATCACACACAGCAGCACCATCACAAACCATTCTACCTCCGGAGCCGGCAGCCCGCCTCAAGGAGCCGGCTCGTGAAACGAAAGCTTTTACGCGCGACGAGCAGCAGATAGAGAAAATGNTGCATTTTGTTTCCTCCTACGATAAGAACCGTCGGCGACGGTACCACCGCCCGCCGTACCGCCGGT] [+] EMBL BM649047 [CATGTTTATTATCTAATCGTCAGTATCATGTTGTGAAATAAGAAACTATCGAGCGCTGTTTTATCGAATCTTTACCACAATTAAGTTTTGTTAAGTGCAAAAGTTTGTGTAACTTATACTAGTCTAAAAGTGCTTCTTATCTTACCCTCACCCTCACATACACAATGTCCCGCGCACAAGACGCCATCGGTATTCTGCGGGGGCTCAAGATAGTGGCCGATGCCGTTGGCAAATCGCAATCCGAGTACGCCAAACATCTGTGGGCCAATTCGAGTGTGCGGGAGGTGCTGGAGCAGCAGCTAGCGACCGGCGAGCAGTCGGTAAAGCAGGTGCTGAACAATCCAACCCAGGAGCTGGAAAAGGTTGGTGGCAAGCTGCGCGAAACGATCGAGCGGACGGCGGTTGTGGCGGAAGGCCTCCGGCAGCTGACCGCAGCGGCTATACCGAAA ] [+] EMBL BX623499 [ ACTTATACTAGTCTAAAAGTGCTTCTTATCTTACCCTCACCCTCACATACACAATGTCCCGCGCACAAGACGCCATCGGTATTCTGCGGGGGCTCAAGATAGTGGCCGATGCCGTTGGCAAATCGCAATCCGAGTACGCCAAACATCTGTGGGCCAATTCGAGTGTGCGGGAGGTGCTGGAGCAGCAGCTAGCGACCGGCGAGCAGTCGGTAAAGCAGGTGCTGAACAATCCAACCCAGGAGCTGGAAAAGGTTGGTGGCAAGCTGCGCGAAACGATCGAGCGGACGGCGGTTGTGGCGGAAGGCCTCCGGCAGCTGACCGCAGCGGCTATACCGAAAGTGGGTCCACTTTCGCCGGATGCATTTCTGAACCAGCGTATTCCGTCCGCTGGAACCGTTGCCCCACCCGGGTCGGAACCCTCGGGAGATATAGCCAGCCTGGACATTTCCAAGATTACCCTGAAGGAGCTGGAATCGATACTGTCCGAGCACAGCAAAACTCGCGAGATAAAGCTAGGCTTAGACAACGGGAAACGATCCACCGCAAAGCATGTGGAACCGATCGTTGCAACAGAAAGCCCAGCGATGGCAGCAGAATCACACACAGCAGCACCATCACAAACCATTCTACCTCCGGAGCCGGCAGCCCGCCTCAAGGAGCCGGCTCGTGAAACGAAAGCTTTTACGCGCGACGAGCAGCAGATAGAGAAAATGNTGCATTTTGTTTCCTCCTACGATAAGAACCGTCGGCGACGGTACCACCGCCCGCCGTACCGCCGGT] consensusID : consensus_9684#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 764 fasta sequence [CTCTAGCAGATTGCCCCGAGGTTTATTCTACTCCGGAGCGGCAGCCGCTCAAGGAGCCGGCTCGTGAAACGAAAGCTTTTACGCGCGACGAGCAGCAGATAGAGAAAATGTTGCATTTTGTTTCCTCCTACGATAAGAACCCGTCGGCTGACGGTACCACCTGCCTGCTGTACTGCGTGTAAATCCAGCACAACGATCGAACTACCTCAGCTCAGCACGGTGGCTAAGCAGCGCAAAGTCCCTTCGTCCACGCGTNNGGCACGATNCGGNGCTCGTTCGGTTGGGCCCTGTTTATGCCTGGACTCGCGTCCTTGGGGCACCTGNGGTTGAACTGACGTCTTAGGCTGAAAGGGGTTGCCCTCGGTCCATTTGGGCTGNGAANCTGGCNTTGAGACTTGGTTGAACAGGCCATGTGGCCCCCTTGNTATCANGCTCCTGATCACAAACATGNCCGGGAAGCGGCATTCCGATCGAAGCAACCGGCATGGTGCAAAAGNGGTTGCCGGGTGGCNTGCCCGNACCTTGCAAAAGCTTGGGGGNCCCACGGAAATTTTTCCTTGGAAAGGCCAATTTNTCCAAGGGCANCTTNTCCGGAACGACCAAATTCCGGANTAGCTAGACACAGAACACCGGCCCAAGAGCCATTGGGGCTCTNGAAAAAAAGCCGGTNTTACCGGAAAAGCCCGGATTGTTATCACCGNNGGCCCAANANAGATCGNGTGTCGACCCCGGNAAANTATCAACCAAACATTTNGACCCCACAG] [+] EMBL AL693879 [CTCTAGCAGATTGCCCCGAGGTTTATTCTACTCCGGAGCGGCAGCCGCTCAAGGAGCCGGCTCGTGAAACGAAAGCTTTTACGCGCGACGAGCAGCAGATAGAGAAAATGTTGCATTTTGTTTCCTCCTACGATAAGAACCCGTCGGCTGACGGTACCACCTGCCTGCTGTACTGCGTGTAAATCCAGCACAACGATCGAACTACCTCAGCTCAGCACGGTGGCTAAGCAGCGCAAAGTCCCTTCGTCCACGCGTNNGGCACGATNCGGNGCTCGTTCGGTTGGGCCCTGTTTATGCCTGGACTCGCGTCCTTGGGGCACCTGNGGTTGAACTGACGTCTTAGGCTGAAAGGGGTTGCCCTCGGTCCATTTGGGCTGNGAANCTGGCNTTGAGACTTGGTTGAACAGGCCATGTGGCCCCCTTGNTATCANGCTCCTGATCACAAACATGNCCGGGAAGCGGCATTCCGATCGAAGCAACCGGCATGGTGCAAAAGNGGTTGCCGGGTGGCNTGCCCGNACCTTGCAAAAGCTTGGGGGNCCCACGGAAATTTTTCCTTGGAAAGGCCAATTTNTCCAAGGGCANCTTNTCCGGAACGACCAAATTCCGGANTAGCTAGACACAGAACACCGGCCCAAGAGCCATTGGGGCTCTNGAAAAAAAGCCGGTNTTACCGGAAAAGCCCGGATTGTTATCACCGNNGGCCCAANANAGATCGNGTGTCGACCCCGGNAAANTATCAACCAAACATTTNGACCCCACAG] consensusID : consensus_9684#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 458 fasta sequence [CCGCCCACGCGTCCGAAACTATCGAGCGCTGTTTTATCGAATCTTTACCACAATTAAGTTTTGTTAAGTGCAAAAGTTGGTGTAACTTATACTAGTCTAAAAGTGCTTCTTATCTTACCCTCACCCTCTCATACACAATGTCCCGCGCACAAGACGCCGTCGGTATTCTGCGGGGGCTCAAGATAGTGGCCGATGCCGTTGGCAAATCGCAATCCGAGTACGCCAAACATCTGTGGGCCAATTCGAGCGTGCGGGAGGTGCTGGAGCAGCAGCTAGCGACCGGCGAGCAGTCGGTCAAGCAGGTGCTGAACAATCCGACCCAGGAGCTGGAAAAGGTTGGTGGCAAGCTGCGCGAAACGATCGAGCGGACGGCGGTTGTGGCGGAAGGCCTCCGGCAGCTGACCGCAGCGGCGATACCGAAAGTGGGCCCACTTTCACCGGATGCATTTCTGAACCAG] [+] EMBL BM632127 [CCGCCCACGCGTCCGAAACTATCGAGCGCTGTTTTATCGAATCTTTACCACAATTAAGTTTTGTTAAGTGCAAAAGTTGGTGTAACTTATACTAGTCTAAAAGTGCTTCTTATCTTACCCTCACCCTCTCATACACAATGTCCCGCGCACAAGACGCCGTCGGTATTCTGCGGGGGCTCAAGATAGTGGCCGATGCCGTTGGCAAATCGCAATCCGAGTACGCCAAACATCTGTGGGCCAATTCGAGCGTGCGGGAGGTGCTGGAGCAGCAGCTAGCGACCGGCGAGCAGTCGGTCAAGCAGGTGCTGAACAATCCGACCCAGGAGCTGGAAAAGGTTGGTGGCAAGCTGCGCGAAACGATCGAGCGGACGGCGGTTGTGGCGGAAGGCCTCCGGCAGCTGACCGCAGCGGCGATACCGAAAGTGGGCCCACTTTCACCGGATGCATTTCTGAACCAG] consensusID : consensus_9684#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 318 fasta sequence [AGGAGCTGACCTCAAAGAATGTACTGACGACGGAGCTCGTACCGGGCGTACCGATGGATCGGTGCTTCGACATGAGGTAAGTTTGTAAAAGGGAAAACTTACACAGGTTTACGATTAATGGGTCTTCCGTTTTCCTCCCAGCCAAGAACATCGTGATCACATTGCGTACTGCGTGATGAAGCTCTGCCTGAACGAGCTGTTCACCTTCCGGTGCATGCAAACGGACCCGAACTGGTCCAACTTCCTGTACGACGCGTCGACGAAGCAGGTGATGCTGATCGATTTCGGCGCGACACGCTTCTACCAGAAGGCATTCAT] [+] EMBL BX618826 [AGGAGCTGACCTCAAAGAATGTACTGACGACGGAGCTCGTACCGGGCGTACCGATGGATCGGTGCTTCGACATGAGGTAAGTTTGTAAAAGGGAAAACTTACACAGGTTTACGATTAATGGGTCTTCCGTTTTCCTCCCAGCCAAGAACATCGTGATCACATTGCGTACTGCGTGATGAAGCTCTGCCTGAACGAGCTGTTCACCTTCCGGTGCATGCAAACGGACCCGAACTGGTCCAACTTCCTGTACGACGCGTCGACGAAGCAGGTGATGCTGATCGATTTCGGCGCGACACGCTTCTACCAGAAGGCATTCAT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9684#0 TAATCAACCCAACCGATCGAACTACCTCAGCTCAGCACGGTGGCTAAGCAGCGCAAAGTC 60 consensus_9684#4 ------------------------------------------------------------ consensus_9684#1 ------------------------------------------------------------ consensus_9684#3 ------------------------------------------------------------ consensus_9684#2 ------------------------------------------------------------ consensus_9684#0 CCTTCGTCACGCGTCGCACGACTCGCCTCGTTCGGTGGCCTGTTTGCCGGACTCGGTCTG 120 consensus_9684#4 ------------------------------------------------------------ consensus_9684#1 ------------------------------------------------------------ consensus_9684#3 ------------------------------------------------------------ consensus_9684#2 ------------------------------------------------------------ consensus_9684#0 GGCACGGTGAACGAGCTAGCGAAGGGTGCCCTCGGCATTGGCGGAACCTGGATGTGAAGC 180 consensus_9684#4 ------------------------------------------------------------ consensus_9684#1 ------------------------------------------------------------ consensus_9684#3 ------------------------------------------------------------ consensus_9684#2 ------------------------------------------------------------ consensus_9684#0 AGGCCCTGTTCAGTCCGACCAACGCGGAACGCATCGTCGACACGCTGTGCAAGGTGCGGG 240 consensus_9684#4 ------------------------------------------------------------ consensus_9684#1 ------------------------------------------------------------ consensus_9684#3 ------------------------------------------------------------ consensus_9684#2 ------------------------------------------------------------ consensus_9684#0 GCGCCGCCCTGAAGCTGGGCCAGATTCTGAGCATTCAGGATTCGAACATCGTTTCGCCGC 300 consensus_9684#4 ------------------------------------------------------------ consensus_9684#1 ------------------------------------------------------------ consensus_9684#3 ------------------------------------------------------------ consensus_9684#2 ------------------------------------------------------------ consensus_9684#0 AGCTGGTGAAAGCGTTCGAGCGTGTCCGGCAGGCGGCCGATTACATGCCGGACTGGCAGG 360 consensus_9684#4 ------------------------------------------------------------ consensus_9684#1 ------------------------------------------------------------ consensus_9684#3 ------------------------------------------------------------ consensus_9684#2 ------------------------------------------------------------ consensus_9684#0 TGGAGCGGCAGCTCGTCAGCGAGCTCGGCCCCGATTGGCGCTCCAAGCTGCAGAGCTTCG 420 consensus_9684#4 ------------------------------------------------------------ consensus_9684#1 ------------------------------------------------------------ consensus_9684#3 ------------------------------------------------------------ consensus_9684#2 ------------------------------------------------------------ consensus_9684#0 ACCAGAAACCGTTTGCGGCCGCCTCGATCGGCCAGGTGCATCGGGGCGTACTGAAGGACG 480 consensus_9684#4 ------------------------------------------------------------ consensus_9684#1 ------------------------------------------------------------ consensus_9684#3 ------------------------------------------------------------ consensus_9684#2 ------------------------------------------------------------ consensus_9684#0 GTGGCATGGAGGTGGCCATCAAGATCCAGTACCCGGGGGTGGCGAAAAGCATCGAAAGCG 540 consensus_9684#4 ------------------------------------------------------------ consensus_9684#1 ------------------------------------------------------------ consensus_9684#3 ------------------------------------------------------------ consensus_9684#2 ------------------------------------------------------------ consensus_9684#0 ACATCGACAATCTCGTCTCGATGCTGAAGGTGTGGGACGTGTTTCCGGCCGGCGTGTTCA 600 consensus_9684#4 ------------------------------------------------------------ consensus_9684#1 -------------------------------------CATGTTTATTATCTAATCGTCAG 23 consensus_9684#3 ------------------------------------------------------------ consensus_9684#2 ------------------------------------------------------------ consensus_9684#0 TCGACAACGTGGTCGCGGTGGCCAAGCGCGAGCTGGCCTGGGAGGTGGATTACACGCGCG 660 consensus_9684#4 -----------------------------------------------------AGGAGCT 7 consensus_9684#1 TATCATGTTGTGAAATAAGAAACTATCGAGCGCTGTTTTATCGAATCTTTACCACAATTA 83 consensus_9684#3 ----CCGCCCACGCGTCCGAAACTATCGAGCGCTGTTTTATCGAATCTTTACCACAATTA 56 consensus_9684#2 --CTCTAGCAGATTGCCCCGAGGTTTATTCTACTCCGGAGCGGCAGCCGCTCAAGGAGCC 58 * consensus_9684#0 AGGCCGAGTACACGGAGCGGTTCGCGGAAATGATACGCCACATGCCGGAG-TACCGTGTG 719 consensus_9684#4 GACCTCAAAGAATGTACTGACG-ACGGAGCTCGTACCGGGCGTACCGATG-GATCG-GTG 64 consensus_9684#1 AGTTTTGTTAAGTGCAAAAGTTTGTGTAACTTATACTAGTC-TAAAAGTG-CTTCTTATC 141 consensus_9684#3 AGTTTTGTTAAGTGCAAAAGTTGGTGTAACTTATACTAGTC-TAAAAGTG-CTTCTTATC 114 consensus_9684#2 GG-CTCGTGAAACGAAAGCTTTTACGCGCGACGAGCAGCAGATAGAGAAAATGTTGCATT 117 * * * * * * consensus_9684#0 CCGCGCGTGGT---AAAGGAGCTGACCTCAAAGAATGTACTGAC-GACGGAGCTCGTACC 775 consensus_9684#4 CTTCG---------ACATGAGGTAAGTTTGTAAAAGGGAAAACT-TACACAGGTT-TACG 113 consensus_9684#1 TTACCCTCACCCTCACATACACAATGTCCCGCGCACAAGACGCC-ATCGGTATTC-TGCG 199 consensus_9684#3 TTACCCTCACCCTCTCATACACAATGTCCCGCGCACAAGACGCC-GTCGGTATTC-TGCG 172 consensus_9684#2 TTGTTTCCTCCTACGATAAGAACCCGTCGGCTGACGGTACCACCTGCCTGCTGTACTGCG 177 * * * * consensus_9684#0 GGGCGTACCGATGGATCGGT-GCTTCGACATGAGCCAAGAACATCGTGATCACATTGCGT 834 consensus_9684#4 ------ATTAATGGGTCTTCCGTTTTCCTCCCAGCCAAGAACATCGTGATCACATTGCGT 167 consensus_9684#1 GGG--GCTCAAGATAGTGGCCGAT--GCCGTTGGCAAATCGCAATCCGAGTACGCCAAAC 255 consensus_9684#3 GGG--GCTCAAGATAGTGGCCGAT--GCCGTTGGCAAATCGCAATCCGAGTACGCCAAAC 228 consensus_9684#2 TGTAAATCCAGCACAACGATCGAA-CTACCTCAGCTCAGCACGGTGGCTAAGCAGCGCAA 236 * ** * * * consensus_9684#0 A-CTGCGTGATGAAGCTCTGCCTGAACGAGCTGTTCACCTTCCGGTGCATGCAAACGGAC 893 consensus_9684#4 A-CTGCGTGATGAAGCTCTGCCTGAACGAGCTGTTCACCTTCCGGTGCATGCAAACGGAC 226 consensus_9684#1 A-TCTGTGGGCCAATTCGAGTGTGCGGGAGGTGCTGGAGCAGCAG--CTAGCGACCGGCG 312 consensus_9684#3 A-TCTGTGGGCCAATTCGAGCGTGCGGGAGGTGCTGGAGCAGCAG--CTAGCGACCGGCG 285 consensus_9684#2 AGTCCCTTCGTCCACGCGTNNG-GCACGATNCGGNGCTCGTTCGG---TTGGGCCCTGTT 292 * * * ** * * * * * * consensus_9684#0 CCGAACTGGTCCAACT--TCCTGTACGACGCGTCGACGAAGCAGGTGATG-CTGATCGAT 950 consensus_9684#4 CCGAACTGGTCCAACT--TCCTGTACGACGCGTCGACGAAGCAGGTGATG-CTGATCGAT 283 consensus_9684#1 AGCAGTCGGTAAAGCAGGTGCTGAACAATCCAACCCAGGAGCTGGAAAAGGTTGGTGGCA 372 consensus_9684#3 AGCAGTCGGTCAAGCAGGTGCTGAACAATCCGACCCAGGAGCTGGAAAAGGTTGGTGGCA 345 consensus_9684#2 TATGCCTGGACTCGCG--TCCTTGGGGCACCTGNGGTTGAACTGACGTCT-TAGGCTGAA 349 ** * * ** * * * * * * consensus_9684#0 TTCGGCGCGACACGCTTCTACCAGAAGGCATTCATGGACGATTACTTAAGGGTCATTATT 1010 consensus_9684#4 TTCGGCGCGACACGCTTCTACCAGAAGGCATTCAT------------------------- 318 consensus_9684#1 AGCTGCGCGAAACGAT-CGAGCGGACGGCGGTTGTGGCGGAAGGCCTCCGGCAGCTGACC 431 consensus_9684#3 AGCTGCGCGAAACGAT-CGAGCGGACGGCGGTTGTGGCGGAAGGCCTCCGGCAGCTGACC 404 consensus_9684#2 AGGGGTTGCCCTCGGTCCATTTGGGCTGNGAANCTGGCNTTGAGACTTGGTTGAACAGGC 409 * ** * * * * * consensus_9684#0 GCGGCGACGAAA---AACGACCGCCAGCAGATACTGGAGCTGTCGCGCAAGATGGGCTTC 1067 consensus_9684#4 ------------------------------------------------------------ consensus_9684#1 GCAGCGGCTATACCGAAAGTGGGTCCACTTTCGCCGGATGCATTTCTGAACCAGCGTATT 491 consensus_9684#3 GCAGCGGCGATACCGAAAGTGGGCCCACTTTCACCGGATGCATTTCTGAACCAG------ 458 consensus_9684#2 CATGTGGCCCCCTTGNTATCANGCTCCTGATCAC---AAACATGNCCGGGAAGCGGCATT 466 consensus_9684#0 CTGACCGGCTACGAAACGCCCGCCATGGAGAAGGCCCACGTCGACGCCGTGCTCATCCTC 1127 consensus_9684#4 ------------------------------------------------------------ consensus_9684#1 CCGTCCGCTGGAACCGTTGCCCCACCCGGGTCGGAACCCTCGGGAGATATAGCCAGCCTG 551 consensus_9684#3 ------------------------------------------------------------ consensus_9684#2 CCGATCG---AAGCAACCGGCATGGTGCAAAAGNGGTTGCCGGGTGGCNTGCCCGNACCT 523 consensus_9684#0 GGCGAAGTGTTCAGCGTGCCGGGCGAGTTCGAGTTCGGTCGGCAGAGCACGACGAAGAAG 1187 consensus_9684#4 ------------------------------------------------------------ consensus_9684#1 GACATTTCCAAGATTACCCTGAAGGAGCTGGAATCGATACTGTCCGAGCACAGCAAAACT 611 consensus_9684#3 ------------------------------------------------------------ consensus_9684#2 TGCAAAAGCTTGGGGGNCCCACGGAAATTTTTCCTTGGAAAGGCCAATTTNTCCAAGGGC 583 consensus_9684#0 ATTGCCGCCCTGGTGCCGGTAATGATTGCGCATCGGCTCTGCCCGCCGCCGGAAGAGATC 1247 consensus_9684#4 ------------------------------------------------------------ consensus_9684#1 CGCGAGATAAAGCTAGGCTTAGACAACGGGAAACGATCCACCGCAAAGCATGTGGA-ACC 670 consensus_9684#3 ------------------------------------------------------------ consensus_9684#2 ANCTTNTCCGGAACGACCA-AATTCCGGANTAGCTAGACACAGAACACCGGCCCAAGAGC 642 consensus_9684#0 TACTCGCTGCACCGGAAGCTTTCCGGTGTGTTTTTGCTGTGCGCGCGGCTCAACGCGAAG 1307 consensus_9684#4 ------------------------------------------------------------ consensus_9684#1 GATCGTTGCAACAGAAAGCCCAGCGATGGCAGCAGAATCACACACAGCAGCACCATCACA 730 consensus_9684#3 ------------------------------------------------------------ consensus_9684#2 CATTGGGGCTCTNGAAAAAAAGCCGGTNTTACCGGAA---AAGCCCGGATTGTTATCACC 699 consensus_9684#0 ATCGACTGTAAGCCTATCTTTAACGAGGTGATGCAGAATTACAAGTTTGACTAAAAACCA 1367 consensus_9684#4 ------------------------------------------------------------ consensus_9684#1 AACCATTCTACCTCCGGAGCCGGCAGCCCGCCTCAAGGAGCCGGCTCGTGAAACGAAAGC 790 consensus_9684#3 ------------------------------------------------------------ consensus_9684#2 GNNGGCCCAANANAGATCGNGTGTCGACCCCGGNAAANTATCAACCAAACATTTNGACCC 759 consensus_9684#0 TTCAGTACAAGGCTGTTGCCGGGCAATAAAGCAACCTGACTAAACGATCCGATTAACACA 1427 consensus_9684#4 ------------------------------------------------------------ consensus_9684#1 TTTTACGCGCGACGAGCAGCAGATAGAGAAAATGNTGCATTTTGTTTCCTCCTACGATAA 850 consensus_9684#3 ------------------------------------------------------------ consensus_9684#2 CACAG------------------------------------------------------- 764 consensus_9684#0 GCCCACGCGTCCGCGG------------------------- 1443 consensus_9684#4 ----------------------------------------- consensus_9684#1 GAACCGTCGGCGACGGTACCACCGCCCGCCGTACCGCCGGT 891 consensus_9684#3 ----------------------------------------- consensus_9684#2 ----------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||