These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9690#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 17 consensus length = 2077 fasta sequence [CCCCGCAGGTTAGCGGCATCGAAGGGCTCGACGTGCAGCAGCAGCAGCAGCAGTACCCCA-GACCCCACCGAACGGGCGAGACACGCGCGCTCCGTCCAAGATGCCGACCACGTCCAAGTTCTTGCAATCGACCCGGAAAATTATCGGTGCTGGCGTAAACTACAAA-GAAATTTTGCGCCTCACAAACTCCCCCAAGCCGGATGCACCCGTCATCTTCTTCAAGCCCATCTCGTCCCTGCTGGACGCGGGCAGTGGCTCGACTGGCTCCACCGGCACCCCGCCAACCATCCGCATCCCGCGCGTCTTCGGCGGCGTAATCAACTTCGAGGCCGAGCTGGGCGTCATC-ATCGGGCGGCGCTGCGCGAATGTGCCCACCGACCAGGCGATGGCGTACG-TCGGTGGCTACTGTCTCGCGCTCGACATGACCGGCATGGAC-TTTATACTGGACGCCCGGCCGAAGGGACTGCCCTGGTGCCTTGGCAAGGGGTTCGACACGTCCACGCCGGTCAGCGCGCTGGTGCAGC-GGGCCGACCT-GCCCAACCC-GGACGATGTGCG-CGTCTGGTGCGAGGTGAACGGTGTGCGCAAGCAGGACGACAGTACGCGCAATCTGATCTTCCCGATCGCGGAGCTGATCGCGTACGTGTCGCGCTTCATGACGCTGGAGGAGAACGATCTGCTGTTGACGGGTACGCCGGCCGGTGCTGGCCCAGTACGCCACGGGGACGTTATTGTGTGTGGGCTGGGGGAGGACCTGATGACGATGCGCTGCCAGGTGGCTGATGAGTAGCAGGGGGAGGTTGCGAAACTTAAACATATCAACGGAATAAATTCGTTCT-CCCTGTCTAAAAAAAAGTGTGTGTCTGTGTTGGATTATATCCTATACGGTCATTACTGTCAGGCGACTTGCTACTCGTGCTGTTTCGAGATACAACATGGCCGCCATACTAAATCCACTTCGCTTCCTTCTGCTCGGCCGGTGACGAGGACAGTAACCGTCTCGTCTCGGTATCCGAATCCTGTTCCTGCTCATCATCCTGAGCGCGCGCCTCGTAGTGGGTCGGCCGGTGCGCCGGAGTGTTCGGTGCCGTTCCGCCAGCCGGTTGCGGTTGCGCACGCTTCACTCGGTTCGGGCTGCTCGGTGTGGCGTCGAGCAGCGCGTACGGCACGTGACAGTTGCGGTCGGAAAAGGCGGGAAAGTACTGACGGTAGCAGAGATAGGACAGCACGATCCCGATCAGCGAACCGACCGTCACGTCCTGCCAGTGGTGATGGTAGTCGCACGTTCGGCTGATCGCGATCATGGTCGCGGCAAACAGGGGCAACCCGGCGGCAATCACGCGCACCGATCGGCCCCGGCCCCG-TTCGTTCATCAGGTGCAGCTTGCCGATAAGCGGCCAGGTCAGGAAGCCGAGCCCAACAAAGGCGAGGGAGGAATGGCCGGATGGGAAGCTC-TGCGCCCCGTCTATCAGTGCCCGCATATCCTTCCCGGTGCAGTGCAGCTCG-TCGTTCAGCACACCGTCCGGGAAGCAGCGCCAGAAGAAATCCGGCC-GCGGGCGGCCTACCGCAA-TCTTGACCGTGTTCGTTATCACTCCGTTCAGGCCGAGGCCGAGCGTGAAGGCGAGCACGGTGCAGCGCAGCTCCTGCCGGTCCCGCGTCCTCAGGTAGTGCAGCGTGAATGCCAGCCCCGGCACGCCGAGCACGATCGGCCAAAGCATGGTCAGCGGTACGTAGCTGTCCGTGCGGGGATTCCGGTACAGCCACAGCTCTTCCGGCTGGATCTTGCGCACGAACGGGGCCTTAAACTCCAGCGCAATGTAAATACACGTCAGAGCAATCCGCACGACCGTTTCCAGCGGCAGGTTGTATTCCGGGGCGCGTGGAAGTTTCTTCTGTCCCGTCGTACCGCCGCAAGCGTACGCCACGCCGGACATGCCCTTGGACGTCATGTCCGGTTTGCAGGAATTGCACAAACACACACACACTCACTTTTGTTATCACTCCAAACCGTGACACGCACTACAGTGTTCCAGAGGGCACGAGAGCGGTCCTGGTCCGAAGCGTGCGGACGCGTGGGCGG] [+] EMBL AL933541 [CCCCGCAGGTTAGCGGCATCGAAGGGCTCGACGTGCAGCAGCAGCAGCAGCAGTACCCCA GACCCCACCGAACGGGCGAGACACGCGCGCTCCGTCCAAGATGCCGACCACGTCCAAGTTCTTGCAATCGACCCGGAAAATTATCGGTGCTGGCGTAAACTACAAA GAAATTTTGCGCCTCACAAACTCCCCCAAGCCGGATGCACCCGTCATCTTCTTCAAGCCCATCTCGTCCCTGCTGGACGCGGGCAGTGGCTCGACTGGCTCCACCGGCACCCCGCCAACCATCCGCATCCCGCGCGTCTTCGGCGGCGTAATCAACTTCGAGGCCGAGCTGGGCGTCATC ATCGGGCGGCGCTGCGCGAATGTGCCCACCGACCAGGCGATGGCGTACG TCGGTGGCTACTGTCTCGCGCTCGACATGACCGGCATGGAC TTTATACTGGACGCCCGGCCGAAGGGACTGCCCTGGTGCCTTGGCAAGGGGTTCGACACGTCCACGCCGGTCAGCGCGCTGGTGCAGC GGGCCGACCT GCCCAA ] [+] EMBL BX619853 [ atnCGGCA CGA GG CGACGTGCAGCAGCAGCAGCAGCAGTACCCCAGGACCCCACCGAACGGGCGAGACACGCGCGCTCCGTCCAAGNTGCCGACCACGTCCAAGTTCTTGCAATCGACCCGGAAAATTATCGGTGCTGGCGTAAACTACAAAGGAAATTTTGCGCCTCACAAACTCCCCCAAGCCGGATGCACCCGTCATCTTCTTCAAGCCCATCTCGTCCCTGCTGGACGCGGGCAGTGGCTCGACTGGCTCCACCGGCACCCCGCCAACCATCCGCATCCCGCGCGTCTTCGGCGGCGTAATCAACTTCGAGGCCGAGCTGGGCGTCATC ATCGGGCGGCGCTGCGCGAATGTGCCCACCGACCAGGCGATGGCGTACG TCGGTGGCTACTGTCTCGCGCTCGACATGACCGGCATGGAC TTTATACTGGACGCCCGGCCGAANGNNCTGCCCTGGTGCCTTGGCAANGGGTTCGACACGTCCACGCCGGTCAGCGCGCTGGTGCAGC GGGCCGANNT GCCCAACCC GGACGATGTGCG CG ] [+] EMBL BX619932 [ ATCGAAGGGCTCGACGTGCAGCAGCAGCAGCAGCAGTACCCCA GACCCCACCGAACGGGCGAGACACGCGCGCTCCGTCCAAGATGCCGACCACGTCCAAGTTCTTGCAATCGACCCGGAAAATTATCGGTGCTGGCGTAAACTACAAA GAAATTTTGCGCCTCACAAACTCCCCCAAGCCGGATGCACCCGTCATCTTCTTCAAGCCCATCTCGTCCCTGCTGGACGCGGGCAGTGGCTCGACTGGCTCCACCGGCACCCCGCCAACCATCCGCATCCCGCGCGTCTTCGGCGGCGTAATCAACTTCGAGGCCGAGCTGGGCGTCATCNATCGGGCGGCGCTGCGCGAATGTGCCCACCGACCAGGCGATGGCGTACG TCGGTGGCTACTGTCTCGCGCTCGACATGACCGGCATGGAC TTTATACTGGACG CCGGCCGAANNGACTG CCTGGTG CTGGGCAANNGGTNCGACACGTCCCCGCNGGTCAGCGCGCTGGTGCAGCGGGGCCGACCTGGCCCAACCCNGGACGATGTGCGNCGTCTGGg ] [+] EMBL BM591329 [ CCGCCGAACGGGCGAGACACGCGCGCTCCGTCCAAGATGCCGACCACGTCCAAGTTCTTGCAATCGACCCGGAAAATTATCGGTGCTGGCGTAAACTACAAA GAAATTTTGCGCCTCACAAACTCCCCCAAGCCGGATGCACCCGTCATCTTCTTCAAGCCCATCTCGTCCCTGCTGGACGCGGGCAGTGGCTCGACTGGCTCCACCGGCACCCCGCCAACCATCCGCATCCCGCGCGTCTTCGGCGGCGTAATCAACTTCGAGGCCGAGCTGGGCGTCATC ATCGGGCGGCGCTGCGCGAATGTGCCCACCGACCAGGCGATGGCGTACG TCGGTGGCTACTGTCTCGCGCTCGACATGACCGGCATGGAC TTTATACTGGACGCCCGGCCGAAGGGACTGCCCTGGTGCCTTGGCAAGGGGTTCGACACGTCCACGCCGGTCAGCGCGCTGGTGCAGC GGGCCGACCT GCCCAACCC GGACGATGTGCG CGTCTGGTGCGAGGTGAACGGTGTGCGCAAGCAGGACGACAGTACGCGCAATCTGATCTTCCCGATCGCGGAGCTGATCGCGTACGTGTCGCGCTTCATGACGCTGGAGGAGAACGATCTGCTGTTGACGGGTACGCCGGCCGGTGCTGGCCCAGTACGCCACGGGGAC ] [+] EMBL BX618978 [ TCCGTCCAAGATGCCGACCACGTCCAAGTTCTTGCAATCGACCCGGAAAATTATCGGTGCTGGCGTAAACTACAAA GAAATTTTGCGCCTCACAAACTCCCCCAAGCCGGATGCACCCGTCATCTTCTTCAAGCCCATCTCGTCCCTGCTGGACGCGGGCAGTGGCTCGACTGGCTCCACCGGCACCCCGCCAACCATCCGCATCCCGCGCGTCTTCGGCGGCGTAATCAACTTCGAGGCCGAGCTGGGCGTCATC ATCGGGCGGCGCTGCGCGAATGTGCCCACCGACCAGGCGATGGCGTACG TCGGTGGCTACTGTCTCGCGCTCGA ATGACCGGCATGGAC TTTATACTGGACGCCCGGCCGAAGGGACTGCCCTGGTGCCTTGGCAAGGGGTTCGACACGTCCACGCCGGTCAGCGCGCTGGTGCAGC GGGCCGACCT GCCCAACCC GGACGATGTGCG CGTCTGGTGCGAGGTGAACGGTGTG ] [+] EMBL BX610889 [ CGTCCAAGATGCCGACCACGTCCAAGTTCTTGCAATCGACCCGGAAAATTATCGGTGCTGGCGTAAACTACAAA GAAATTTTGCGCCTCACAAACTCCCCCAAGCCGGATGCACCCGTCATCTTCTTCAAGCCCATCTCGTCCCTGCTGGACGCGGGCAGTGGCTCGACTGGCTCCACCGGCACCCCGCCAACCATCCGCATCCCGCGCGTCTTCGGCGGCGTAATCAACTTCGAGGCCGAGCTGGGCGTCATC ATCGGGCGGCGCTGCGCGAATGTGCCCACCGACCAGGCGATGGCGTACG TCGGTGGCTACTGTCTCGCGCTCGA ATGACCGGCATGGAC TTTATACTGGACGCCCGGCCGAAGGGACTGCCCTGGTGCCTTGGCAAGGGGTTCGACACGTCCACGCCGGTCAGCGCGCTGGTGCAGC GGGCCGACCT GCCCAACCC GGACGATGTGCG CGTCTGGTGCGAGGTGAACGGTGTGCGCAAGCAGGACGACAGTACGCGCAATCTGATCTTCCCGATCGCGGAGCTGATCGCGTACGTGTCGCGCTTCATGACGCTGGAGGAGAACGATCTGCTGTTGACGGGTACGCCGGCCGGTGCTGGCCCAGTACGCCACGGGGACGTTATTGTGTGTGGGCTGGGGGAGGACCTGATGACGATGCGCTGCCAGGTGGCTGATGAGTAGCAGGGGGAGGTTGCGAAACTTAAACATATCAACGGAATAAA ] [+] EMBL AGA285363 [ TCCAAGTTCTTGCAATCGACCCGGAAAATTATCGGTGCTGGCGTAAACTACAAA GAAATTTTGCGCCTCACAAACTCCCCCAAGCCGGATGCACCCGTCATCTTCTTCAAGCCCATCTCGTCCCTGCTGGACGCGGGCAGTGGCTCGACTGGCTCCACCGGCACCCCGCCAACCATCCGCATCCCGCGCGTCTTCGGCGGCGTAAACAACTTCGAGGCCGAGCTGGGCGTCATC ATCGGGCGGCGCTGCGCGAATGTGCCCACCGACCAGGCGATGGCGTACG TCGGTGGCTACGGTCTCGCGCTCGACATGACCGGGATGGAC T ] [+] EMBL AGA285470 [ AAATTATCGGTGCTGGCGTAAACTACAAA GAAATTTTGCGCCTCACAAACTCCCCCAAGCCGGATGCACCCGTCATCTTCTTCAAGCCCATCTCGTCCCTGCTGGACGCGGGCAGTGGCTCGACTGGCTCCACCGGCACCCCGCCAACCATCCGCATCCCGCGCGTCTTCGGCGGCGTAATCAACTTCGAGGCCGAGCTGGGCGTCATC ATCGGGCGGCGCTGCGCGAATGTGCCCACCGACCAGGCGATGGCGTACGTTCGGTGGCTACTGTCTCGCGCTCGACATGACCGGCATGGACTTTTATACTGGACGCCCGGCCGAAGGGACTGGCC ] [+] EMBL BM584917 [ TCGGTGCTGGCGTAAACTACAAA GAAATTTTGCGCCTCACAAACTCCCCCAAGCCGGATGCACCCGTCATCTTCTTCAAGCCCATCTCGTCCCTGCTGGACGCGGGCAGTGGCTCGACTGGCTCCACCGGCACCCCGCCAACCATCCGCATCCCGCGCGTCTTCGGCGGAGTAATCAACTTCGAGGCCGAGCTGGGCGTCATC ATCGGGCGGCGCTGCGCGAATGTGCCCACCGACCAGGCGATGGCGTACG TCGGTGGCTACTGTCTCGCGCTCGACATGACCGGCATGGAC TTTATACTGGACGCCCGGCCGAAGGGACTGCCCTGGTGCCTTGGCAAGGGGTTCGACACGTCCACGCCGGTCAGCGCGCTGGTGCAGC GGGCCGACCT GCCCAACCC GG ] [-] EMBL AGA284174 [ TGTGCCCACCGACCAGGCGATGGCGTACG TCGGTGGCTACTGTCTCGCGCTCGACATGACCGGCATGGAC TTTATACTGGACGCCCGGCCGAAGGGACTGCCCTGGTGCCTTGGCAAGGGGTTCGACACGTCCACGCCGGTCAGCGCGCTGGTGCAGC GGGCCGACCT GCCCAACCC GGACGATGTGCG CGTCTGGTGCGAGGTGAACGGTGTGCGCAAGCAGGACGACAGTACGCGCAATCTGATCTTCCCGATCGCGGAGCTGATCGCGTACGTGTCGCGCTTCATGACGCTGGAGGAGAACGATCTGCTGTTGACGGGTACGCCGGCCGGTGCTGGCCCAGTACGCCACGGGGACGTTATTGTGTGTGGGCTGGGGGAGGACCTGATGACGATGCGCTGCCAGGTGGCTGATGAGTAGCAGGGGGAGGTTGCGAAACTTAAACATATCAACGGAATAAATTCGTTCT CCCTGTCTAAAAAAAA ] [-] EMBL AGA284067 [ CGATGTGCG CGTCTGGTGCGAGATGAACGGTGTGCGCAAGCAGGACGACAGTACGCGCAATCTGATCTTCCCGATCGCGGAGCTGATCGCGTACGTGTCGCGCTTCATGACGCTGGAGGAGAACGATCTGCTGTTGACGGGTACGCCGGCCGGTGCTGGCCCAGTACGCCACGGGGACGTTATTGTGTGTGGGCTGGGGGAGGACCTGATGACGATGCGCTGCCAGGTGGCTGATGAGTAGCAGGGGGAGGTTGCGAAACTTAAACATATCAACGGAATAAATTCGTTCT CCCTGTCAAAAAAAA ] [-] EMBL BM583530 [ GGGACGTTATTGTGTGTGGGCTGGGGGAGGACCTGATGACGATGCGCTGCCAGGTGGCTGATGAGTAGCAGGGGGAGGTTGCGAAACTTAAACATATCAACGGAATAAATTCGTTCTGCCCTGTCTATGTGTGTGTGTGTGTCTGTGTTGGATTATATCCTATACGGTCATTACTGTCAGGCGACTTGCTACTCGTGCTGTTTCGAGATACAACATGGCCGCCATACTAAATCCACTTCGCTTCCTTCTGCTCGGCCGGTGACGAGGACAGTAACCGTCTCGTCTCGGTATCCGAATCCTGTTCCTGCTCATCATCCTGAGCGCGCGCCTCGTAGTGGGTCGGCCGGTGCGCCGGAGTGTTCGGTGCCGTTCCGCCAGCCGGTTGCGGTTGCGCACGCTTCACTCGGTTCGGGCTGCTCGGTGTGGCGTCGAGCAGCGCGTACGGCACGTGACAGTTGCGGTCGGAAAAGGCGGGAAAGTACTGACGGTAGCAGAGATAGGACAGCACGATCCCGATCAGCGAACCGACCGTCACGTCCTGCCAGTGGTGATGGTAGTCGCACGTTCGGCTGATCGCGATCATGGTCGCGGCAAACAGGGGCAACCCGGCGGCAATCACGCGCACCGATCGGCCCCGGCCCCG TTCGTTCATCAGGTGCAGCTTGCCGATAAGCGG ] [-] EMBL BX604596 [ CCGATCGGCCCCGGCCCCGTTTCGTTCATCAGGTGCAGCTTGCCGATAAGGTACCAGGTCAGGAAGCCGAGCCCAACAAAGGCGAGGGAGGAATGGCCGGATGGGAAGCTC TGCGCCCCGTCTATCAGTGCCCGCATATCCTTCCCGGTGCAGTGCAGCTCG TCGTTCAGCACACCGTCCGGGAAGCAGCGCCAGAAGAAATCCGGCC GCGGGCGGCCTACCGCAA TCTTGACCGTGTTCGTTATCACTCCGTTCAGGCCGAGGCCGAGCGTGAAGGCGAGCACGGTGCAGCGCAGCTCCTGCCGGTCCCGCGTCCTCAGGTAGTGCAGCGTGAATGCCAGCCCCGGCACGCCGAGCACGATCGGCCAAAGCATGGTCAGCGGTACGTAGCTGTCCGTGCGGGGATTCCGATACAGCCACAGCTCTTCCGGCTGGATCTTGCGCACGAACGGGGCCTTAAACTCCAGCGCAATGTAAATACACGTCAGAGCAATCCGCACGACCGTTTCCAGCGGCAGGTTGTATTCCGGGGCACGTGGAAGTTTCTTCTGTCCCGTCGTACCGCCGCAAGCGTACGCCACGCCGGACATGCCCTTGGACGTCATGTCCGGTTTGCAGGAATTGCACAAACACACACACACTCACTTTTGTTATCACTCCAAACCGTGACACGCACTACAGTGTTCCAGAGGGCACGAG ] [-] EMBL BM645873 [ GCCGAGCCCAACAAAGGCGAAGGAGGAATGGCCGGATGGGAAGCTCTTGCG CCCGTCTATCAGTGCGCGCATGTCCTTCCCGGTGCAGTGCAGCTCG TCGTTCAGCACACCGTCCGGGAAGCAGCGCCAGAAGAAATCCGGCC GCGGGCGGCCTACCGCAA TCTTGACCGTGTTCGTTATCACTCCGTTCAGGCCGAGGCCGAGCGTGAAGGCGAGCACGGTGCAGCGCAGCTCCTGCCGGTCCCGCGTCCTCAGGTAGTGCAGCGTGAATGCCAGCCCCGGCACGCCGAGCACGATCGGCCAAAGCATGGTCAGCGGTACGTAGCTGTCCGTGCGGGGATTCCGGTACAGCCACAGCTCTTCCGGCTGGATCTTGCGCACGAACGGGGCCTTAAACTCCAGCGCAATGTAAATACACGTCAGAGCAATCCGCACGACCGTTTCCAGCGGCAGGTTGTATTCCGGGGCGCGTGGAAGTTTCTTCTGTCCCGTCGTACCGCCGCAAGCGTACGCCACGCCGGACATGCCCTTGGACGTCATGTCCGGTTTGCAGTAATTGCACAAACACACACACACTCACTTTTGTTATCACTCCAAACCGTGACACGCACTACAGTGTTCCAGCGGACGCGTGGGCGG ] [-] EMBL BM596155 [ ATCAGTGCCCGCATATCCTTCCCGGTGCAGTGCAGCTTGTTGGTTCAGCACACCGTCCGGGAAGCAGCGCCAGAAGAAATCCGGCCGGCGGGCGGCCTACCGCAATTCTTGACCGTGTTCGTTATCACTCCGTTCAGGCCGAGGCCGAGCGTGAAGGCGAGCACGGTGCAGCGCAGCTCCTGCCGGTCCCGCGTCCTCAGGTAGTGCAGCGTGAATGCCAGCCCCGGCACGCCGAGCACGATCGGCCAAAGCATGGTCAGCGGTACGTAGCTGTCCGTGCGGGGATTCCGATACAGCCACAGCTCTTCCGGCTGGATCTTGCGCACGAACGGGGCCTTAAACTCCAGCGCAATGTAAATACACGTCAGAGCAATCCGCACGACCGTTTCCAGCGGCAGGTTGTATTCCGGGGCACGTGGAAGTTTCTTCTGTCCCGTCGTACCGCCGCAAGCGTACGCCACGCCGGACATGCCCTTGGACGTCATGTCCGGTTTGCAGGAATTGCACAAACACACACACACTCACTTTTGTTATCACTCCAAACCGTGACACGCACTACAGTGTTCCAGAGGGCACGAGAGCGG ] [-] EMBL BM579694 [ GTGCAGTGCAGCTCG TCGTTCAGCACACCGTCCGGGAAGCAGCGCCAGAAGAAATCCGGCC GCGGGCGGCCTACCGCAA TCTTGACCGTGTTCGTTATCACTCCGTTCAGGCCGAGGCCGAGCGTGAAGGCGAGCACGGTGCAGCGCAGCTCCTGCCGGTCCCGCGTCCTCAGATAGTGCAGCGTGAATGCCAGCCCCGGCACGCCGAGCACGATCGGCCAAAGCATGGTCAGCGGTACGTAGCTGTCCGTGCGGGGATTCCGGTACAGCCACAGCTCTTCCGGCTGGATCTTGCGCACGAACGGGGCCTTAAACTCCAGCGCAATGTAAATACACGTCAGAGCAATCCGCACGACCGTTTCCAGCGGCAGGTTGTATTCCGGGGCGCGTGGAAGTTTCTTCTGTCCCGTCGTACCGCCGCAAGCGTACGCCACGCCGGACATGCCCTTGGACGTCATGTCCGGTTTGCAGGAATTGCACAAACACACACACACTCACTTTTGTTATCACTCCAAACCGTGACACGCACTACAGTGTTCCAGAGGGCACGAGAGGCGTCCTGGTCCGAAGCGTGCGGACGCGTGGGCGG] [-] EMBL BM618130 [ GCGTGAATGCCAGCCCCGGCACTCCGAGCACGATCGGCCAAAGCATGGTCAGCGGTACGTAGCTGTCCGTGCGGGGATTCCGGTACAGCCACAGCTCTTCCGGCTGGATCTTGCGCACGAACGGGGCCTTAAACTCCAGCGCAATGTAAATACACGTCAGAGCAATCCGCACGACCGTTTCCAGCGGCAGGTTGTATTCCGGGGCGCGTGG ] consensusID : consensus_9690#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 386 fasta sequence [ACATGTGTATGTATAGGTGTGTTTGCGTGTGCTAGCATACTTCATATTTCCCCCCTCTCTTTCGTGTATGCGGTCGATCGTACCATCTCCTAATTGATACACGGCGTAGTAACACAACAGCTGACGATTCACGGCAATCGAAGGGCTCGACGTGCAGCAGCAGTACCCCAGCAGTAGTACCCCAGACCCCACCGAACGGGCGAGACACGCGCGCTCCGTCCAAGATGCCGACCACGTCCAAGTTCTTGCAATCGACCCGGAAAATTATCGGTGCTGGCGTAAACTACAAAGAAATTTTGCGCCTCACAAACTCCCCCAAGCCGGATGCACCCGTCATCTTCTTCAAGCCCATCTCGTCCCTGCTGGACGCGGGCAGTGGCTCGACT] [+] EMBL BX626213 [ACATGTGTATGTATAGGTGTGTTTGCGTGTGCTAGCATACTTCATATTTCCCCCCTCTCTTTCGTGTATGCGGTCGATCGTACCATCTCCTAATTGATACACGGCGTAGTAACACAACAGCTGACGATTCACGGCAATCGAAGGGCTCGACGTGCAGCAGCAGTACCCCAGCAGTAGTACCCCAGACCCCACCGAACGGGCGAGACACGCGCGCTCCGTCCAAGATGCCGACCACGTCCAAGTTCTTGCAATCGACCCGGAAAATTATCGGTGCTGGCGTAAACTACAAAGAAATTTTGCGCCTCACAAACTCCCCCAAGCCGGATGCACCCGTCATCTTCTTCAAGCCCATCTCGTCCCTGCTGGACGCGGGCAGTGGCTCGACT] consensusID : consensus_9690#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 348 fasta sequence [AGAATCGCCACGAGGTGTAAGAAAGCAGCACTGCTCGGTGNCGTAATCAATTGGGGAGCATACTTTATATTTCCCCCCTCTCTTTCGTGTATGCGGTCGATCGTACCATCGTCCTAATTGATACACGGCGTAGTAACACAACAGCTGACGATTCGCGGCAATCGAAGGGCTCGACGTGCAGCAGACAGCAGCAGCGAGTACCCCAGACGCCCACCGAACGGGCGATGACTACGCGCGNCTCCGTCCAAGAGTGCCGACCACGGTCCAAGGTTCTTGCAAATCGGAGCCCGGAAAATTATCGGTGCTGGCGGTAAACTACAAGAGAACATTTTGCGCCTCACAAGAGCT] [+] EMBL BX469301 [AGAATCGCCACGAGGTGTAAGAAAGCAGCACTGCTCGGTGNCGTAATCAATTGGGGAGCATACTTTATATTTCCCCCCTCTCTTTCGTGTATGCGGTCGATCGTACCATCGTCCTAATTGATACACGGCGTAGTAACACAACAGCTGACGATTCGCGGCAATCGAAGGGCTCGACGTGCAGCAGACAGCAGCAGCGAGTACCCCAGACGCCCACCGAACGGGCGATGACTACGCGCGNCTCCGTCCAAGAGTGCCGACCACGGTCCAAGGTTCTTGCAAATCGGAGCCCGGAAAATTATCGGTGCTGGCGGTAAACTACAAGAGAACATTTTGCGCCTCACAAGAGCT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9690#1 ------------------------------------------------------------ consensus_9690#2 ------------------------------------------------------------ consensus_9690#0 CCCCGCAGGTTAGCGGCATCGAAGGGCTCGACGTGCAGCAGCAGCAGCAGCAGTACCCCA 60 consensus_9690#1 ------------------------------------------------------------ consensus_9690#2 ------------------------------------------------------------ consensus_9690#0 GACCCCACCGAACGGGCGAGACACGCGCGCTCCGTCCAAGATGCCGACCACGTCCAAGTT 120 consensus_9690#1 -------------------------------------------------ACATGTGTATG 11 consensus_9690#2 -------------------------AGAATCGCCACGAGGTGTAAGAAAGCAGCACTGCT 35 consensus_9690#0 CTTGCAATCGACCCGGAAAATTATCGGTGCTGGCGTAAACTACAAAGAAATTTTGCGCCT 180 consensus_9690#1 TATAGGTGTGTTTGCGTGTGCTAGCATACTTCATATTTCCC----CCCTCTCTTTCGTGT 67 consensus_9690#2 CGGTGNCGTAATCAATTGGGG-AGCATACTTTATATTTCCC----CCCTCTCTTTCGTGT 90 consensus_9690#0 CACAAACTCCCCCAAGCCGGA-TGCACCCGTCATCTTCTTCAAGCCCATCTCGTCCCTGC 239 * *** * * ** ** * ** **** * * ** consensus_9690#1 ---ATGCGGTCGATCGTACCATC-TCCTAATTGATACACGGCGTAGTAACACAACAGCTG 123 consensus_9690#2 ---ATGCGGTCGATCGTACCATCGTCCTAATTGATACACGGCGTAGTAACACAACAGCTG 147 consensus_9690#0 TGGACGCGGGCAGTGGCTCGACTGGCTCCACCGGCACCCCGC-CAACCATCCGCATCCCG 298 * **** * * * * * * * * ** * ** * * * * * consensus_9690#1 ACGATTCACGGCAATCGAA--GGGCTCGACGTGCAGCAGCAGTACCCCAGCAGT-AGTAC 180 consensus_9690#2 ACGATTCGCGGCAATCGAA--GGGCTCGACGTGCAGCAG----ACAGCAGCAGCGAGTAC 201 consensus_9690#0 CGCGTCTTCGGCGGCGTAATCAACTTCGAGGCCGAGCTGGGCGTCATCATCGGGCGGCGC 358 * **** ** **** * *** * * ** * * * * consensus_9690#1 CCC----AGAC-CCCACCGAACGGGCGA-GAC--ACGCGCGC-TCCGTCCAAGA-TGCCG 230 consensus_9690#2 CCC----AGACGCCCACCGAACGGGCGATGACT-ACGCGCGNCTCCGTCCAAGAGTGCCG 256 consensus_9690#0 TGCGCGAATGTGCCCACCGACCAGGCGATGGCGTACGTCGGTGGCTACTGTCTCGCGCTC 418 * * ******** * ***** * * *** * * ** consensus_9690#1 ACCACG-TC--CAAG-TTCTTGCAA-TCGA--CCCGGA-AAATTATCGGTGCTGGCG-TA 281 consensus_9690#2 ACCACGGTC--CAAGGTTCTTGCAAATCGGAGCCCGGA-AAATTATCGGTGCTGGCGGTA 313 consensus_9690#0 GACATGACCGGCATGGACTTTATAC-TGGACGCCCGGCCGAAGGGACTGCCCTGGTGCCT 477 ** * * ** * ** * * * ***** ** * * **** * consensus_9690#1 AACTACAAAG---AAA--TTTTGCGCCTCACAA-ACTCCCCCAAGCCGGATGCACCCGTC 335 consensus_9690#2 AACTACAAGA---GAACATTTTGCGCCTCACAA-GAGCT--------------------- 348 consensus_9690#0 TGGCAAGGGGTTCGACACGTCCACGCCGGTCAGCGCGCTGGTGCAGCGGGCCGACCTGCC 537 * * * **** ** * consensus_9690#1 ATCTTCTTCAAGCCCATCTCGTCCCTGCTGGACGCGGGCAGTGGCTCGACT--------- 386 consensus_9690#2 ------------------------------------------------------------ consensus_9690#0 CAACCCGGACGATGTGCGCGTCTGGTGCGAGGTGAACGGTGTGCGCAAGCAGGACGACAG 597 consensus_9690#1 ------------------------------------------------------------ consensus_9690#2 ------------------------------------------------------------ consensus_9690#0 TACGCGCAATCTGATCTTCCCGATCGCGGAGCTGATCGCGTACGTGTCGCGCTTCATGAC 657 consensus_9690#1 ------------------------------------------------------------ consensus_9690#2 ------------------------------------------------------------ consensus_9690#0 GCTGGAGGAGAACGATCTGCTGTTGACGGGTACGCCGGCCGGTGCTGGCCCAGTACGCCA 717 consensus_9690#1 ------------------------------------------------------------ consensus_9690#2 ------------------------------------------------------------ consensus_9690#0 CGGGGACGTTATTGTGTGTGGGCTGGGGGAGGACCTGATGACGATGCGCTGCCAGGTGGC 777 consensus_9690#1 ------------------------------------------------------------ consensus_9690#2 ------------------------------------------------------------ consensus_9690#0 TGATGAGTAGCAGGGGGAGGTTGCGAAACTTAAACATATCAACGGAATAAATTCGTTCTC 837 consensus_9690#1 ------------------------------------------------------------ consensus_9690#2 ------------------------------------------------------------ consensus_9690#0 CCTGTCTAAAAAAAAGTGTGTGTCTGTGTTGGATTATATCCTATACGGTCATTACTGTCA 897 consensus_9690#1 ------------------------------------------------------------ consensus_9690#2 ------------------------------------------------------------ consensus_9690#0 GGCGACTTGCTACTCGTGCTGTTTCGAGATACAACATGGCCGCCATACTAAATCCACTTC 957 consensus_9690#1 ------------------------------------------------------------ consensus_9690#2 ------------------------------------------------------------ consensus_9690#0 GCTTCCTTCTGCTCGGCCGGTGACGAGGACAGTAACCGTCTCGTCTCGGTATCCGAATCC 1017 consensus_9690#1 ------------------------------------------------------------ consensus_9690#2 ------------------------------------------------------------ consensus_9690#0 TGTTCCTGCTCATCATCCTGAGCGCGCGCCTCGTAGTGGGTCGGCCGGTGCGCCGGAGTG 1077 consensus_9690#1 ------------------------------------------------------------ consensus_9690#2 ------------------------------------------------------------ consensus_9690#0 TTCGGTGCCGTTCCGCCAGCCGGTTGCGGTTGCGCACGCTTCACTCGGTTCGGGCTGCTC 1137 consensus_9690#1 ------------------------------------------------------------ consensus_9690#2 ------------------------------------------------------------ consensus_9690#0 GGTGTGGCGTCGAGCAGCGCGTACGGCACGTGACAGTTGCGGTCGGAAAAGGCGGGAAAG 1197 consensus_9690#1 ------------------------------------------------------------ consensus_9690#2 ------------------------------------------------------------ consensus_9690#0 TACTGACGGTAGCAGAGATAGGACAGCACGATCCCGATCAGCGAACCGACCGTCACGTCC 1257 consensus_9690#1 ------------------------------------------------------------ consensus_9690#2 ------------------------------------------------------------ consensus_9690#0 TGCCAGTGGTGATGGTAGTCGCACGTTCGGCTGATCGCGATCATGGTCGCGGCAAACAGG 1317 consensus_9690#1 ------------------------------------------------------------ consensus_9690#2 ------------------------------------------------------------ consensus_9690#0 GGCAACCCGGCGGCAATCACGCGCACCGATCGGCCCCGGCCCCGTTCGTTCATCAGGTGC 1377 consensus_9690#1 ------------------------------------------------------------ consensus_9690#2 ------------------------------------------------------------ consensus_9690#0 AGCTTGCCGATAAGCGGCCAGGTCAGGAAGCCGAGCCCAACAAAGGCGAGGGAGGAATGG 1437 consensus_9690#1 ------------------------------------------------------------ consensus_9690#2 ------------------------------------------------------------ consensus_9690#0 CCGGATGGGAAGCTCTGCGCCCCGTCTATCAGTGCCCGCATATCCTTCCCGGTGCAGTGC 1497 consensus_9690#1 ------------------------------------------------------------ consensus_9690#2 ------------------------------------------------------------ consensus_9690#0 AGCTCGTCGTTCAGCACACCGTCCGGGAAGCAGCGCCAGAAGAAATCCGGCCGCGGGCGG 1557 consensus_9690#1 ------------------------------------------------------------ consensus_9690#2 ------------------------------------------------------------ consensus_9690#0 CCTACCGCAATCTTGACCGTGTTCGTTATCACTCCGTTCAGGCCGAGGCCGAGCGTGAAG 1617 consensus_9690#1 ------------------------------------------------------------ consensus_9690#2 ------------------------------------------------------------ consensus_9690#0 GCGAGCACGGTGCAGCGCAGCTCCTGCCGGTCCCGCGTCCTCAGGTAGTGCAGCGTGAAT 1677 consensus_9690#1 ------------------------------------------------------------ consensus_9690#2 ------------------------------------------------------------ consensus_9690#0 GCCAGCCCCGGCACGCCGAGCACGATCGGCCAAAGCATGGTCAGCGGTACGTAGCTGTCC 1737 consensus_9690#1 ------------------------------------------------------------ consensus_9690#2 ------------------------------------------------------------ consensus_9690#0 GTGCGGGGATTCCGGTACAGCCACAGCTCTTCCGGCTGGATCTTGCGCACGAACGGGGCC 1797 consensus_9690#1 ------------------------------------------------------------ consensus_9690#2 ------------------------------------------------------------ consensus_9690#0 TTAAACTCCAGCGCAATGTAAATACACGTCAGAGCAATCCGCACGACCGTTTCCAGCGGC 1857 consensus_9690#1 ------------------------------------------------------------ consensus_9690#2 ------------------------------------------------------------ consensus_9690#0 AGGTTGTATTCCGGGGCGCGTGGAAGTTTCTTCTGTCCCGTCGTACCGCCGCAAGCGTAC 1917 consensus_9690#1 ------------------------------------------------------------ consensus_9690#2 ------------------------------------------------------------ consensus_9690#0 GCCACGCCGGACATGCCCTTGGACGTCATGTCCGGTTTGCAGGAATTGCACAAACACACA 1977 consensus_9690#1 ------------------------------------------------------------ consensus_9690#2 ------------------------------------------------------------ consensus_9690#0 CACACTCACTTTTGTTATCACTCCAAACCGTGACACGCACTACAGTGTTCCAGAGGGCAC 2037 consensus_9690#1 ---------------------------------------- consensus_9690#2 ---------------------------------------- consensus_9690#0 GAGAGCGGTCCTGGTCCGAAGCGTGCGGACGCGTGGGCGG 2077 |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||