These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9692#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 956 fasta sequence [CTGTTGGCCTACAGGAAAATTGCATAGCGCACACGCTCGCTTCTGTTATTGTTGTATTTTTGATCAATTTTTAACAGAAAAACCACCGCAAAAAGCACCCCAACAATCTCCACCGCATCACACAGGATCTGTAGCAATGAGTTTCAAGTATGAGTGTGCCGATTTCTCGCAGTTTCAGGAGCAACTGAAAAAGATGCGCGATCTGGATGACAAAATCATCTACGCACTGAACACAACCATACCGACGGAATCGTTCAAAGGTCAGGTCGATGCTGAAGCAAAGTGTCGCGACCTGCACGGACAGCTAGAATCGGGCTACAGCCACCGGCAGGAAGCGATCAAGAAGTGTATCGTCGTGTGTGCCGACACGGTCAAGACACTCAAGGACAAGCGGGAGGAAAACAAGGACG-ACGTTGCACTGAACAAGCAGTTCAAAACGGAACAGCGAAAGCTACGATTGCTGCAATCTGAGCTGAGCGTGGAGGACATTATTCGGGAACGAACGCAGAAAACGTTCCGCGAACG-TTGTAGGCTATTTTTCCGCTTCGATTCGCTATAAAGCAACCCGTCG----GAGAGAGAGAGAGAGGTTCTAGAAGGCTCTACGGCAATATCACTACAAATGCAGTGGTGGTGCATTGCTGACGCACTCGTGTTCGAAGCGCACCAGCG-AAGAAGCAGCAGCATTTATACGTGAGTGGCGCATTTAATG-GTAAAGGGTTGAGGAAAAAGGGGGCGAGATTTTCTGGCACTTG-TGATCACAGCAGGTGTTTTTACAAAGATTTTAAGAAGCTTCACAGTTTTGCAATCCGATCGTGAGGAACGTCCGCTTTGGTGAGCGAACCGATTGTTTGCTAACACATCAAACATGTTATATAATGTTGTTTATTGTAGTAAAGCGTAATAGCTGTCGA-ACA-TTTTGGTCAAAAAAAAAAAAAAAAGGCCACATGTGCTCGAGC] [-] EMBL CNS09DQS [CTGTTGGCCTACAGGAAAATTGCATAGCGCACACGCTCGCTTCTGTTATTGTTGTATTTTTGATCAATTTTTAACAGAAAAACCACCGCAAAAAGCACCCCAACAATCTCCACCGCATCACACAGGATCTGTAGCAATGAGTTTCAAGTATGAGTGTGCCGATTTCTCGCAGTTTCAGGAGCAACTGAAAAAGATGCGCGATCTGGATGACAAAATCATCTACGCACTGAACACAACCATACCGACGGAATCGTTCAAAGGTCAGGTCGATGCTGAAGCAAAGTGTCGCGACCTGCACGGACAGCTAGAATCGGGCTACAGCCACCGGCAGGAAGCGATCAAGAAGTGTATCGTCGTGTGTGCCGACACGGTCAAGACACTCAAGGACAAGCGGGAGGAAAACAAGGACG ACGTTGCACTGAACAAGCAGTTCAAAACGGAACAGCGAAAGCTACGATTGCTGCAATCTGAGCTGAGCGTGGAGGACATTATTCGGGAACGAACGCAGAAAACGTTCCGCGAACG TTGTAGGCTATTTTTCCGCTTCGATTCGCTATAAAGCAACCCGTCG GAGAGAGAGAGAGAGGTTCTAGAAGGCTCTACGGCAATATCACTACAAATGCAGTGGTGGTGCATTG TGACGCACTCGTGTTCGAAGCGCACCAGCG AAGAAGCAGCAGCATTTATACGTGAGTGGCGCATTTAATG GTAAAGGGTTGAGGAAAAAGGGGGCGAGATTTTCTGGCACTTG TGATCACAGCAGGTGTTTTTACAAAGATTTTAAGAAGCTTCACAGTTTTGCAATCCGATCGTGAGGAACGTCCGCTTTGGTGAGCGAACCGATTGTTTGCTAACACATCAAACATGTTATATAATGTTGTTTATTGTAGTAAAGCGTAATAGCTGT GAGGCA TTTTGtccacac ] [+] EMBL CNS09CM6 [ gcAAATTGCATAGCGCACACGCTCGCTTCTGTTATTGTTGTATTTTTGATCAATTTTTAACAGAAAGACCACCGCAAAAAGCACCCCAACAATCTCCACCGCATCACACAGGATCCGTAGCAATGAGTTTCAAGTATGAGTGTGCCGATTTCTCGCAGTTTCAGGAGCAACTGAAAAAGATGCGCGATCTGGATGACAAAATCATCTACGCACTGAACACAACCATACCGACGGAATCGTTCAAAGGTCAGGTCGATGCTGAAGCAAAGTGTCGCGACCTGCACGGACAGCTAGAATCGGGCTACAGCCACCGGCAGGAAGCGATCAAGAAGTGTATCGTCGTGTGTGCCGACACGGTCAAGACACTCAAGGACAAGCGGGAGGAAAACAAGGACG ACGTTGCACTGAACAAGCAGTTCAAAACGGAACAGCGAAAGCTACGATTGCTGCAATCTGAGCTGAGCGTGGAGGACATTATTCGGGAACGAACGCAGAAAACGTTCCGCGAACG TTGTAGGCTATTTTTCCGCTTCGATTCGCTATAAAGCAACCCGTCG GAGAGAGAGAGAGAGGTTCTAGAAGGCTCTACGGCAATATCACTACAAATGCAGTGGTGGTGCATTGCTGACGCACTCGTGTTCGAAGCGCACCAGCG AAGAAGCAGCAGCATTTATACGTGAGTCGCGCATTTAATG GTAAAGGGTTGAGGAAAAAGGGGGCGAGATTTTCTGGCACTTG TGATCACAGCAGGTGTTTTTACAAAGATTTTAAGAAGCTTCACAGTTTTGCAATCCGATCGTGAGGAACGTCCGCTTTGGTGAGCGAACCGATTGTTTGCTAACACATCAAACATGTTATATAATGTTGTTTATTGTAGTAAAGCGTAATAGCTGTCGA ACATTTTTGGTCTAAAAAAAAAA ] [+] EMBL CNS093BU [ TTGAAAAGCGCACACGCTCGCTTCTGTTATTGTTGTATTTTTGATCAATTTTTAACAGAAAAACCACCGCAAAAAGCACCCCAACAATCTCCACCGCATCACACAGGATCTGTAGCAATGAGTTTCAAGTATGAGTGTGCCGATTTCTCGCAGTTTCAGGAGCAACTGAAAAAGATGCGCGATCTGGATGACAAAATCATCTACGCACTGAACACAACCATACCGACGGAATCGTTCAAAGGTCAGGTCGATGCTGAAGCAAAGTGTCGCGACCTGCACGGACAGCTAGAATCGGGCTACAGCCACCGGCAGGAAGCGATCAAGAAGTGTATCGTCGTGTGTGCCGACACGGTCAAGACACTCAAGGACAAGCGGGAGGAAAACAAGGATG ACGTTGCACTGAACAAGCAGTTCAAAACGGAACAGCGAAAGCTACGATTGCTGCAATCTGAGCTGAGCGTGGAGGACATTATTCGGGAACGAACGCAGAAAACGTTCCGCGAACG TTGTAGGCTATTTTTCCGCTTCGATTCGCTATAAAGCAACCCGTCG GAGAGAGAGAGAGAGGTTCTAGAAGGCTCTACGGCAATATCACTACAAATGCAGTGGTGGTGCATTGCTGACGCACTCGTGTTCGAAGCGCACCAGCGAAAGAAGCAGCAGCATTTATACGTGAGTGGCGCATTTAATG GTAAAGGGTTGAGGAAAAAGGGGGCGAGATTTTCTGGCACTTG TGATCACAGCAGGTGTTTTTACAAAGATTTTAAGAAGCTTCACAGTTTTGCAATCCGATCGTGAGGAACGTCCGCTTTGGTGAGCGAACCGATTGTTTGCTAACACATCAAACATGTTATATAATGTTGTTTATTGTAGTAAAGCGAAAAAGCTGTCGA A A AAAAAAAAAAAAAAAAAAAAAAAAGGCC ] [-] EMBL CNS09CM7 [ ATAGCGCACACGCTCGCTTCTGTTATTGTTGTATTTTTGATCAATTTTTAACAGAAAGACCACCGCAAAAAGCACCCCAACAATCTCCACCGCATCACACAGGATCCGTAGCAATGAGTTTCAAGTATGAGTGTGCCGATTTCTCGCAGTTTCAGGAGCAACTGAAAAAGATGCGCGATCTGGATGACAAAATCATCTACGCACTGAACACAACCATACCGACGGAATCGTTCAAAGGTCAGGTCGATGCTGAAGCAAAGTGTCGCGACCTGCACGGACAGCTAGAATCGGGCTACAGCCACCGGCAGGAAGCGATCAAGAAGTGTATCGTCGTTTGTGCCGACACGGTCAAAACACTCAAGGACAAGCGGGAGGAAAACAAGGACGAACGTTGCACTGAACAAGCAGTTCAAAACGGAACAGCGAAAGCTACGATTGCTGCAATCTGAGCTGAGCGTGGAGGACATTATTCGGGAACGAACGCAGAAAACGTTCCGCGAACG TTGTAGGCTATTTTTCCGCTTCGATTCGCTATAAAGCAACCCGTCG GAGAGAGAGAGAGAGGTTCTAGAAGGCTCTACGGCAATATCACTACAAATGCAGTGGTGGTGCATTG TAACGCACTCGTGTTCGAAGCGCACCAGCG AAGAAGCAGCAGCATTTATACGTGAGTGGCGCATTTAATG GTAAAGGGTTGAGGAAAAAGGGGGCGAGATTTTCTGGCACTTG TGATCACAGCAGGTGTTTTTACAAAGATTTTAAGAAGCTTCACAGTTTTGCAATCCGATCGTGAGGAACGTCCGCTTTGGTGAGCGAACCGATTGTTTGCTAACACATCAAACATGTTATATAATGTTGTTTATTGTAGTAAAGCGTAATAGC ] [+] EMBL CNS09DQR [ tccAGCGCACACGCTCGCTTCTGTTATTGTTGTATTTTTGATCAATTTTTAACAGAAAAACCACCGCAAAAAGCACCCCAACAATCTCCACCGCATCACACAGGATCTGTAGCAATGAGTTTCAAGTATGAGTGTGCCGATTTCTCGCAGTTTCAGGAGCAACTGAAAAAGATGCGCGATCTGGATGACAAAATCATCTACGCACTGAACACAACCATACCGACGGAATCGTTCAAAGGTCAGGTCGATGCTGAAGCAAAGTGTCGCGACCTGCACGGACAGCTAGAATCGGGCTACAGCCACCGGCAGGAAGCGATCAAGAAGTGTATCGTCGTGTGTGCCGACACGGTCAAGACACTCAAGGACAAGCGGGAGGAAAACAAGGACG ACGTTGCACTGAACAAGCAGTTCAAAACGGAACAGCGAAAGCTACGATTGCTGCAATCTGAGCTGAGCGTGGAGGACATTATTCGGGAACGAACGCAGAAAACGTTCCGCGAACGCTTGTAGGCTATTTTTCCGCTTCGATTCGCTATAAAGCAACCCGTCG GAGAGAGAGAGAGAGGTTCTAGAAGGCTCTACGGCAATATCACTACAAATGCAGTGGTGGTGCATTGCTGACGCACTCGTGTTCGAAGCGCACCAGCG AAGAAGCAGCAGCATTTATACGTGAGTGGCGCATTTAATG GTAAAGGGTTGAGGAAAAAGGGGGCGAGATTTTCTGGCACTTG TGATCACAGCAGGTGTTTTTACAAAGATTTTAAGAAGCTTCACAGTTTTGCAATCCGATCGTGAGGAACGTCCGCTTTGGTGAGCGAACCGATTGTTTGCTAACACATCAAACATGTTATATAATGTTGTTTATTGTAGTAAAGCGTAATAGCTGTCGA ACA TTTTGGTCCAAAAAAAAAAAAAAAGGCCACATGTGCTCGAGC] [+] EMBL CNS09JBE [ ATTGTTGTATTTTTGATCAATTTTTAACAGAAAAGCCACCGCAAAAAGCACCCCAACAATCTCCACCGCATCACACAGGATCTGTAGCAATGAGTTTCAAGTATGAGTGTGCCGATTTCTCGCAGTTTCAGGAGCAACTGAAAAAGATGCGCGATCTGGATGACAAAATCATCTACGCACTGAACACAACCATACCGACGGAATCGTTCAAAGGTCAGGTCGATGCTGAAGCAAAGTGTCGCGACCTGCACGGACAGCTAGAATCGGGCTACAGCCACCGGCAGGAAGCGATCAAGAAGTGTATCGTCGTGTGTGCCGACACGGTCAAGACACTCAAGGACAAGCGGGAGGAAAACAAGGACG ACGTTGCACTGAACAAGCAGTTCAAAACGGAACAGCGAAAGCTACGATTGCTGCAATCTGAGCTGAGCGTGGAGGACATTATTCGGGAACGAACGCAGAAAACGTTCCGCGAACGCTTGTAGGCTATTTTTCCGCTTCGATTCGCTATAAAGCAACCCGTCG GAGAGAGAGAGAGAGGTTCTAGAAGGCTCTACGGCAATATCACTACAAATGCAGTGGTGGTGCATTGCTGACGCACTCGTGTTCGAAGCGCACCAGCG AAGAAGCAGCAGCATTTATACGTGAGTGGCGCATTTAATG GTAAAGGGTTGAGGAAAAAGGGGGCGAGATTTTCTGGCACTTG TGATCACAGCAGGTGTTTTTACAAAGATTTTAAGAAGCTTCACAGTTTTGCAATCCGATCGTGAGGAACGTCCGCTTTGGTGAGCGAACCGATTGTTTGCTAACACATCAAACATGTTATATAATGTTGTTTATTGTAGTAAAGCGTAATAGCTGTCGA ACA TTTTGGTATAAAAAAAAAAAAAAAaaag ] [+] EMBL AGA285048 [ CAATCTACACCGCATCACACAGGATCTGTAGCAATGAGTTTCAAGTATGAGTGTGCCGATTTCTCACAGTTTCAGGAGCAACTGAAAAAGATGCGCGATCTGGATGACAAAATCATCTACGCACTGAACACAACCATACCGACGGAATCGTTCAAAGGTCAGGTCGATGCTGAAGCAAAGTGTCGCGACCTGCACGGACAGCTAGAATCGGGCTACAGCCACCGGCAGGAAGCGATCAAGAAGTGTATCGTCGTGTGTGCCGACACGGTCAAGACGCTCAAGGACAAGCGGGAGGAAAACAAGGACG ACGTTGCACTGAACAAGCAGTTCAAAACGGAACAGCGAAAGCTACGATTGCTGCAATCCGAGCTGAGCGTCGAGGACATTATTCGGGAACGGACGCAAAAAACATTCCGCGAACG TTGTAGGCTATTTTTCCGTTTCGATTCGCTATAAAGCAGCGCATCG GNGAGAGA ] [-] EMBL CNS09JBF [ CACACAGGGTTTGTAGCAATGAGTTTCAAGTATGAGTGTGCCGATTTCTCGCAGTTTCAGGAGCAACTGAAAAAGATGCGCGATCTGGATGACAAAATCATCTACGCACTGAACACAACCATACCGACGGAATCGTTCAAAGGTCAGGTCGATGCTGAAGCAAAGTGTCGCGACCTGCACGGACAGCTAGAATCGGGCTACAGCCACCGGCAGGAAGCGATCAAGAAGTGTATCGTCGTTTGTGCCGACACGGTCAAGACACTCAAGGACAAGCGGGAGGAAAACAAGGACGCACGTTGCACTGAACAAGCAGTTCAAAACGGAACAGCGAAAGCTACGATTGCTGCAATCTGAGCTGAGCGTGGAGGACATTATTCGGGAACGAACGCAGAAAACGTTCCGCGAACG TTGTAGGCTATTTTTCCGCTTCGATTCGCTATAAAGCAACCCGTCG GAGAGAGAGAGAGAGGTTCTAGAAGGCTCTACGGCAATATCACTACAAATGCAGTGGTGGTGCATTTGTTACGAACTCGTGTTCGAAGCGCACCAGCG AAGAAGCAGCAGCATTTATACGTGAGTGGCGCATTTAATG GTAAAGGGTTGAGGAAAAAGGGGGCGAGATTTTCTGGCACTTG TGATCACAGCAGGTGTTTTTACAAAGATTTTAAGAAGCTTCACAGTTTTGCAATCCGATCGTGAGGAACGTCCGCTTTGGTGAGCGAACCGATTGTTTGCTAACACATCAAACATGTTATATAATGTTGTTTATTGTAGTAAAGCGTAATAGC ] [+] EMBL AL931134 [ cgccgaggnGACGGAATCGTTC AAGGTCAGGTCGATGCTGAAGC AAGTGTCGCGACCTGCACGGACAGCTAGAATCGGGCTACAGCCACCGGCAGGAAGCGATCAAGAAGTGTATCGTCGTGTGTGCCGATACGGTCAAGACACTCAAGGACAAGCGGGAGGAAAACAAGGACG ACGTTGCACTGAACAAGCAGTTCAAAACGGAACAGCGAAAGCTACGATTGCTGCAATCTGAGCTGAGCGTGGAGGACATTATTCGGGAACGAACGCAGAAAACGTTCCGCGAACG TTGTAGGCTATTTTTCCGCTTCGATTCGCTATAAAGCAACCCGTCG GAGAGAGAGAGAGGTTCTAGAAGGCTCTACGGCAATATCACTACAAATGCAGTGGTGGTGCATTGCTGACGCACTCGTGTTCGAAGCGCACCAGCG AAGAAGCAGCAGCATTTATACGTGAGTGGCGCATTTA ] [-] EMBL AGA283758 [ TATTCGGGAACGGACGCAAAAAACATTCCGCGAACG TTGTAGGCTATTTTTCCGTTTCGATTCGCTATAAAGCAGCGCATCGGAGAGAGAGAGAGAGAGAGGTTCTAGAAGGCTCTACGGCAATATCACTACGAATGCAGTGGTGGTGCATCGCTGACGCACTCGAGTTCGAAGCGCACCAGCA AAGAAGCAGCAGCATTTATACGTGAGTGGCGCATTTAATG ATAAATGGTTGAGGAAAAAAGGGGCGAGATATTCTGGCACTTG TTATCACAGCAGGTGTTTTTACAAAGATTTTAAGTAGCTTCACAGTTTTGCAATCCGATCGTGAGGAACGTCCGCTTTGGTGAGCGAACCGATTGTCCGCAAACACATCAAACATGTTATATAATGTTGTTTATTGTAGTAAAGCGTAATAGCTGTCGA Aaaaaaa ] [-] EMBL AGA281484 [ AAACATTCCGCGGACG TTGTAGGCTATTTTTCCGTTTCGATTCGCTATAAAGCAGCGCATCGGAGAGAGAGAGAGAGAGAGGTTCTAGAAGGCTCTACGGCAATATCACTACGAATGCAGTGGTGGTGCATCGCTGACGCACTCGAGTTCGAAGCGCACCAGCA AAGAAGCAGCAGCATTTATACGTGAGTGGCGCATTTAATGAGTAAATGGTTGAGGAAAAAAGGGGCGAGATATTCTGGCACTTGTTGATCACAGCAGGTGTTTTTACAAAGATTTTAAGTAGCTTCACAGTTTTGCAATCCGATCGTGAGGAACGTCCGCTTTGGTGAGCGAACCGATTGTCCGCAAACACATCAAACATGTTATATAATGTTGTTTATTGTAGTAAAGCGTAATAGCTGTCGA Aaaaaaaa ] [-] EMBL CNS093BV [ G AAGAAGCAGCAGCATTTATACCTGAGTGGCCCATTTAATG GTAAAGGGTTGAGGAAAAAGGGGGCGAGATTTTCTGGCACTTG TGATCACAGCAGGTGTTTTTACAAAGATTTTAAGAAGCTTCACAGTTTTGCAATCCGATCGTGAGGAACGTCCGCTTTGGTGAGCGAACCGATTGTTTGCTAACACATCAAACATGTT ] consensusID : consensus_9692#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 723 fasta sequence [CCGCCCACGCGTCCGCCCACGCGTCCGCGCACGCTTCTGTTATTGTTGTATTTTTGATCAATTTTTAACAGAAAAACCACCGCAAAAACCACCCCGACAATCTCCACCGCATCACACAGAATCTGTAGCAATGAGTTTCAAGTATGAGTGTGCCGATTTCTCGCAGTTTCAGGAGCAACTGAAAAAGATGCGCGATCTGGATGACAAAATCATCTACGCACTGAACACAACCATACCGACGGAATCGTTCAAAGGTCAGGTCGATGCTGAAGCAAAGTGTCGCGACCTGCACGGACAGCTAGAATCGGGCTACAGCCACCGGCAGGAAGCGATCAAGAAGTGTATCGTCGTGTGTGCCGACACGGTCAAGACGCTCAAGGACAAGCGGGAGGAAAACAAGGACGACGTTGCACTGAACAAGCAGTTCAAAACGGAACAGCGAAAGCTACGATTGCTGCAATCCGAGCTGAGCGTGGAAGACATTATTCGGGAACGAACGCAGAAAACGTTCCGCGAACGTTGTAGGCTATTTTTCCGCTTCGATTCGCTATAAAGCAATCCGTCGGAGAGAGAGAGGTTCTAGAAGGCTCTACGGCAATATCACTACAAATGCAGTGGTGGTGCATTGCTGACGCACTCGTGTTCGAAGCGCACCAGCGAAGAAGCAGCAGCATTTATACGTGAGTGGCGCATTTAATGGTAAAGGGTTGAGGAAAAAAGGGG] [+] EMBL BM608107 [CCGCCCACGCGTCCGCCCACGCGTCCGCGCACGCTTCTGTTATTGTTGTATTTTTGATCAATTTTTAACAGAAAAACCACCGCAAAAACCACCCCGACAATCTCCACCGCATCACACAGAATCTGTAGCAATGAGTTTCAAGTATGAGTGTGCCGATTTCTCGCAGTTTCAGGAGCAACTGAAAAAGATGCGCGATCTGGATGACAAAATCATCTACGCACTGAACACAACCATACCGACGGAATCGTTCAAAGGTCAGGTCGATGCTGAAGCAAAGTGTCGCGACCTGCACGGACAGCTAGAATCGGGCTACAGCCACCGGCAGGAAGCGATCAAGAAGTGTATCGTCGTGTGTGCCGACACGGTCAAGACGCTCAAGGACAAGCGGGAGGAAAACAAGGACGACGTTGCACTGAACAAGCAGTTCAAAACGGAACAGCGAAAGCTACGATTGCTGCAATCCGAGCTGAGCGTGGAAGACATTATTCGGGAACGAACGCAGAAAACGTTCCGCGAACGTTGTAGGCTATTTTTCCGCTTCGATTCGCTATAAAGCAATCCGTCGGAGAGAGAGAGGTTCTAGAAGGCTCTACGGCAATATCACTACAAATGCAGTGGTGGTGCATTGCTGACGCACTCGTGTTCGAAGCGCACCAGCGAAGAAGCAGCAGCATTTATACGTGAGTGGCGCATTTAATGGTAAAGGGTTGAGGAAAAAAGGGG] [+] EMBL AGA283081 [ ATGACAAAATCATCTACGCACTGAACACAACCATACCGACGGAATCGTTCAAAGGTCAGGTCGATGCTGAAGCAAAGTGTCGCGACCTGCACGGACAGCTAGAATCGGGCTACAGCCACCGGCAGGAAGCGATCAAGAAGTGTATCGTCGTGTGTGCCGACACGGTCAAGACGCTCAAGGACAAGCGGGAGGAAAACAAGGACGACGTTGCACTGAACAAGCAGTTCAAAACGGAACAG ] consensusID : consensus_9692#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 659 fasta sequence [GACGCGCCAGGAGAAGGGCATCTTCCGGCCGGACATGATCGAGCTGTTGAGGCAGGCGAAGAAGGGCAGTTTGAAGCACCAGCAGGCAGAGGAACCAAGGACGGACAGTGAAACCGGGGAAGGGTTTGCGACCGTCGAGGAGTCGCACGTGGGGCGGCGTGCGCACGATCGCGTCTGGACGGACACGGAGCTGATTGCGCAGGCGTTCATCTTCTTCTTCGCCGGGTTCGAAACCATCTCCTGGACGATATCGTTTGCGCTGTACGAGCTAGCGGTAAATGAGGACATTCAGGCCCGACTGTACGAGGAGGTGCGCGATGCGGAACAGTCGCTGGAGGAGGGGAAAACGCTCATGTACGAACAGCTGCAATCGCTGCCGTACCTGGATATGGTCGTGTCGGAAACGCTCCGACGGTGGCCCATCGCAACGGTGCTGAATCGCGAGTGCGTCCGGAACTATCAGTACGACGATGGGCAGGGGACACGGTTTACCATCGAGAAGGGAACGCTGGTCTTCATACCGGTCGTGGGCATCCATTTCGACCCGAAGTACTTCCCCGAGCCGGAGCGTTTCGATCCCGAACGGTTCAGTGCGGCCAATCGGAACAACATCCAACCGGGGTACGTACCTACCGTTCGGTGCTGGACCACGCAATTGC] [+] EMBL BX610320 [GACGCGCCAGGAGAAGGGCATCTTCCGGCCGGACATGATCGAGCTGTTGAGGCAGGCGAAGAAGGGCAGTTTGAAGCACCAGCAGGCAGAGGAACCAAGGACGGACAGTGAAACCGGGGAAGGGTTTGCGACCGCCGAGGAGTCGCACGTGGGGCGGCGGGCGCACGATCGCGTCGGGACG ] [+] EMBL BX609474 [ AGGCAGAGGAACCAAGGACGGACAGTGAAACCGGGGAAGGGTTTGCGACCGTCGAGGAGTCGCACGTGGGGCGGCGTGCGCACGATCGCGTCTGGACGGACACGGAGCTGATTGCGCAGGCGTTCATCTTCTTCTTCGCCGGGTTCGAAACCATCTCCTGGACGATATCGTTTGCGCTGTACGAGCTAGCGGTAAATGAGGACATTCAGGCCCGACTGTACGAGGAGGTGCGCGATGCGGAACAGTCGCTGGAGGAGGGGAAAACGCTCATGTACGAACAGCTGCAATCGCTGCCGTACCTGGATATGGTCGTGTCGGAAACGCTCCGACGGTGGCCCATCGCAACGGTGCTGAATCGCGAGTGCGTCCGGAACTATCAGTACGACGATGGGCAGGGGACACGGTTTACCATCGAGAAGGGAACGCTGGTCTTCATACCGGTCGTGGGCATCCATTTCGACCCGA ] [+] EMBL BX616044 [ GGAAGGGTTTGCGACCGTCGAGGAGTCGCACGTGGGGCGGCGTGCGCACGATCGCGTCTGGACGGACACGGAGCTGATTGCGCAGGCGTTCATCTTCTTCTTCGCCGGGTTCGAAACCATCTCCTGGACGATATCGTTTGCGCTGTACGAGCTAGCGGTAAATGAGGACATTCAGGCCCGACTGTACGAGGAGGTGCGCGATGCGGAACAGTCGCTGGAGGAGGGGAAAACTCTCACGTACGAACAGCTGCAATCGCTGCCGTACCTGGATATGGTCGTGTCGGAAACGCTCCGACGGTGGCCCATCGCAACGGTGCTGAATCGCGAGTGCGTCCGGAACTATCAGTACGACGATGGGCAGGGGACACGGTTTACCATCGAGAAGGGAACGCTGGTCTTCATACCGGTCGTGGGCATCCATTTCGACCCGAAGTACTTCCCCGAGCCGGAGCGTTTCGATCCCGAACGGTTCAGTGCGGCCAATCGGAACAACATCCAACCGGGGTACGTACCTACCGTTCGGTGCTGGACCACGCAATTGC] consensusID : consensus_9692#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 565 fasta sequence [AGAATNGCCACGGTNATTTGAAGCACAGCAGGCAGCAGGAACAATAACGGACAGTGAAACCTGGGGAAGGGTTTGCGACCGTCGAGGAGTCGCACGTGTGGTGCGGCCTGCGCACGATCGCGTCTGGACGGACACGGAGCTGATAGCGCAGTGCCTTCATTTTCTTCTTCGCCGGGTTCGAAACCATCTCCTGGACGATATCGTTTGCGCTGTACGAGCTAGCGGTGAATGAGGACATTCAGGCCCGACTGTACGAGGAGGTGCGCGATGCGGAACAGTCGCTGGAGGAGGGGAAAACGCTCACGTACGAACAGCTGCAATCGCTGCCGTACCTGGATATGGTCGTGTCGGAAACCGCTCCGACGGTGGCCCCATCGCAACGGTGCTGAATCGCGAGTTGCGTCCGGAACTATCAGTACGACGATGGGCAGGGGACACGGTTTACCATCGAGAAGGGAACGCTGGTCTTCATACCGGGTCGTGGGCATTCCATTTTCCGACCGAAGGTACTTCCCCGAGACCGGANNCCGGTTATCCGGATTCCCCGGAACGGGTTCANGGTGGC] [+] EMBL AL695752 [AGAATNGCCACGGTNATTTGAAGCACAGCAGGCAGCAGGAACAATAACGGACAGTGAAACCTGGGGAAGGGTTTGCGACCGTCGAGGAGTCGCACGTGTGGTGCGGCCTGCGCACGATCGCGTCTGGACGGACACGGAGCTGATAGCGCAGTGCCTTCATTTTCTTCTTCGCCGGGTTCGAAACCATCTCCTGGACGATATCGTTTGCGCTGTACGAGCTAGCGGTGAATGAGGACATTCAGGCCCGACTGTACGAGGAGGTGCGCGATGCGGAACAGTCGCTGGAGGAGGGGAAAACGCTCACGTACGAACAGCTGCAATCGCTGCCGTACCTGGATATGGTCGTGTCGGAAACCGCTCCGACGGTGGCCCCATCGCAACGGTGCTGAATCGCGAGTTGCGTCCGGAACTATCAGTACGACGATGGGCAGGGGACACGGTTTACCATCGAGAAGGGAACGCTGGTCTTCATACCGGGTCGTGGGCATTCCATTTTCCGACCGAAGGTACTTCCCCGAGACCGGANNCCGGTTATCCGGATTCCCCGGAACGGGTTCANGGTGGC] consensusID : consensus_9692#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 125 fasta sequence [CAGCTATTACGCTTATACTACAATAAACAACATTATATAACATGTTTGATGTGTTTGCGGACAATCGGAACAACATCCAACCGGGTACGTACCTACCGTTCGGTGCTGGACCACGCAATTGCATT] [+] EMBL AGA283034 [CAGCTATTACGCTTATACTACAATAAACAACATTATATAACATGTTTGATGTGTTTGCGGACAATCGGAACAACATCCAACCGGGTACGTACCTACCGTTCGGTGCTGGACCACGCAATTGCATT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9692#2 --GACGCGCCAGGAGAAGGGCATCTTCCGGCCGGACATGATCGAGCTGTTGAGGCAGGCG 58 consensus_9692#3 -------------------------------------------------------AGAAT 5 consensus_9692#4 ------------------------------------------------------------ consensus_9692#0 CTGTTGGCCTACAGGAAAATTGCATAGCGCACACGCTCGCTTCTGTTATTGTTGTATTTT 60 consensus_9692#1 ----CCGCCCACGCGTCCGCC-CAC-GCGTCCGCGCACGCTTCTGTTATTGTTGTATTTT 54 consensus_9692#2 AAGAAGGGCAGTTTGAAGCACCAGCAGGCAGAGGAACCAAGGACGGACAGTGAAACC-GG 117 consensus_9692#3 NGCCACGGTNATTTGAAGCAC-AGCAGGCAGCAGGAACAATAACGGACAGTGAAACCTGG 64 consensus_9692#4 ------------------------------------------------------------ consensus_9692#0 TGATCAATTTTTAACAGAAAAACCACCGCAAAAAGCACCCCAACAATCTCCACCGCATCA 120 consensus_9692#1 TGATCAATTTTTAACAGAAAAACCACCGCAAAAACCACCCCGACAATCTCCACCGCATCA 114 consensus_9692#2 GGAAGGGTTTGCGACCGTCGAGGAGTCGCACGTGGGG--CGGCGTGCGCACGATCGC-GT 174 consensus_9692#3 GGAAGGGTTTGCGACCGTCGAGGAGTCGCACGTGTGGTGCGGCCTGCGCACGATCGC-GT 123 consensus_9692#4 -----------------------------------------------CAGCTATTAC-GC 12 consensus_9692#0 CACAGGATCTGTAGCAAT----GAGTTTCAAGTATGA---GTGTGCCGATTTCTCGCAGT 173 consensus_9692#1 CACAGAATCTGTAGCAAT----GAGTTTCAAGTATGA---GTGTGCCGATTTCTCGCAGT 167 * * * consensus_9692#2 CTGGACGGACACGGAGCTGATTGCGCAG-GCGTTCATCTTCTTCTTCGCCGGGTTCGAAA 233 consensus_9692#3 CTGGACGGACACGGAGCTGATAGCGCAGTGCCTTCATTTTCTTCTTCGCCGGGTTCGAAA 183 consensus_9692#4 TTATACTACAATAAACAACATTATATAACATGTTTGATGTGTTTGCGGACAA--TCGGAA 70 consensus_9692#0 TTCAGGAGCAACTGAAAAAGATGCGCGATCTGGATGACAAAATCATCTACGCACTGAACA 233 consensus_9692#1 TTCAGGAGCAACTGAAAAAGATGCGCGATCTGGATGACAAAATCATCTACGCACTGAACA 227 * * * * * * * consensus_9692#2 CCATCTCCTGGACGATATCGTTTGCGCTGTACGAGCTAGCGGTAAATGAGGACATTCAGG 293 consensus_9692#3 CCATCTCCTGGACGATATCGTTTGCGCTGTACGAGCTAGCGGTGAATGAGGACATTCAGG 243 consensus_9692#4 CAACATCCAACCGGGTA-CGTACCTACCGTTCGGTGCTGGACCACGCAATTGCATT---- 125 consensus_9692#0 CAACCATACCGACGGAATCGTTCAAA--GGTCAGGTCGATGCTGAAGCAAAGTGTCGCGA 291 consensus_9692#1 CAACCATACCGACGGAATCGTTCAAA--GGTCAGGTCGATGCTGAAGCAAAGTGTCGCGA 285 * * * * *** * * * * consensus_9692#2 CCCGACTGTACGAGGAGGTGCGCGATGCGGAACAGTCGCTGGAGGAGGGGAAAACGCTCA 353 consensus_9692#3 CCCGACTGTACGAGGAGGTGCGCGATGCGGAACAGTCGCTGGAGGAGGGGAAAACGCTCA 303 consensus_9692#4 ------------------------------------------------------------ consensus_9692#0 CCTGCACGGACAGCTAGAATCGGGCTACAGC-CACCGGCAGGAAGCGATCAAGAAGTGTA 350 consensus_9692#1 CCTGCACGGACAGCTAGAATCGGGCTACAGC-CACCGGCAGGAAGCGATCAAGAAGTGTA 344 consensus_9692#2 TGTACGAACA-GCTGCAATCGCTGCCGTACCTGGATATGGTCGTGTCGGAAAC-GCTCCG 411 consensus_9692#3 CGTACGAACA-GCTGCAATCGCTGCCGTACCTGGATATGGTCGTGTCGGAAACCGCTCCG 362 consensus_9692#4 ------------------------------------------------------------ consensus_9692#0 TCGTCGTGTGTGCCGACACGGTCAAGACACTCAAGGACAAGCGGGAGGAAAACAAGGACG 410 consensus_9692#1 TCGTCGTGTGTGCCGACACGGTCAAGACGCTCAAGGACAAGCGGGAGGAAAACAAGGACG 404 consensus_9692#2 ACGGTGGCCC-ATCGCAACGGTGCTGAATCGCGAGT-GCGTCCGGAACTATCAGTACGAC 469 consensus_9692#3 ACGGTGGCCCCATCGCAACGGTGCTGAATCGCGAGTTGCGTCCGGAACTATCAGTACGAC 422 consensus_9692#4 ------------------------------------------------------------ consensus_9692#0 ACGTTGCACTGAACA-AGCAGTTCAAAACGG--AACAGCGAAAGCTACGATTGCTGCAAT 467 consensus_9692#1 ACGTTGCACTGAACA-AGCAGTTCAAAACGG--AACAGCGAAAGCTACGATTGCTGCAAT 461 consensus_9692#2 GATGGGCAGGGGACACGGTTTACCATCGAGAAGGGAACGCTGGTCTTCATACCGG-TCGT 528 consensus_9692#3 GATGGGCAGGGGACACGGTTTACCATCGAGAAGGGAACGCTGGTCTTCATACCGGGTCGT 482 consensus_9692#4 ------------------------------------------------------------ consensus_9692#0 C-TGAGCTGAGCGTGGAGGACATTATTCGGGAACGAACGCAGAAAACGTTCCGCGAACGT 526 consensus_9692#1 C-CGAGCTGAGCGTGGAAGACATTATTCGGGAACGAACGCAGAAAACGTTCCGCGAACGT 520 consensus_9692#2 GGGCAT-CCATTT--CGACCCGAAGTACTTCCCCGAGCCGGAGCGTTTCGATCCCGAACG 585 consensus_9692#3 GGGCATTCCATTTTCCGACCGAAGGTACTTCCCCGAGACCGGANNCCGGTTATCCGGATT 542 consensus_9692#4 ------------------------------------------------------------ consensus_9692#0 TGTAGGCTATTTTTCCGCTTCGATTCGCTATAAAGCAACCCGTCGGAGAGAGAGAGAGAG 586 consensus_9692#1 TGTAGGCTATTTTTCCGCTTCGATTCGCTATAAAGCAATCCGTCGGAGAGAGAGAG---- 576 consensus_9692#2 GTTCAGTGCGGCCAATCGGAACAACATCCAACCGGGGTACGTACCTACCGTTCGGTGCTG 645 consensus_9692#3 CCCCGGAACGGGT--TCANGGTGGC----------------------------------- 565 consensus_9692#4 ------------------------------------------------------------ consensus_9692#0 GTTCTAGAAGGCT--CTACGGCAATATCACTACAAATGCAGTGGTGGTGCATTGCTGACG 644 consensus_9692#1 GTTCTAGAAGGCT--CTACGGCAATATCACTACAAATGCAGTGGTGGTGCATTGCTGACG 634 consensus_9692#2 GACCACGCAATTGC---------------------------------------------- 659 consensus_9692#3 ------------------------------------------------------------ consensus_9692#4 ------------------------------------------------------------ consensus_9692#0 CACTCGTGTTCGAAGCGCACCAGCGAAGAAGCAGCAGCATTTATACGTGAGTGGCGCATT 704 consensus_9692#1 CACTCGTGTTCGAAGCGCACCAGCGAAGAAGCAGCAGCATTTATACGTGAGTGGCGCATT 694 consensus_9692#2 ------------------------------------------------------------ consensus_9692#3 ------------------------------------------------------------ consensus_9692#4 ------------------------------------------------------------ consensus_9692#0 TAATGGTAAAGGGTTGAGGAAAAAGGGGGCGAGATTTTCTGGCACTTGTGATCACAGCAG 764 consensus_9692#1 TAATGGTAAAGGGTTGAGGAAAAAAGGGG------------------------------- 723 consensus_9692#2 ------------------------------------------------------------ consensus_9692#3 ------------------------------------------------------------ consensus_9692#4 ------------------------------------------------------------ consensus_9692#0 GTGTTTTTACAAAGATTTTAAGAAGCTTCACAGTTTTGCAATCCGATCGTGAGGAACGTC 824 consensus_9692#1 ------------------------------------------------------------ consensus_9692#2 ------------------------------------------------------------ consensus_9692#3 ------------------------------------------------------------ consensus_9692#4 ------------------------------------------------------------ consensus_9692#0 CGCTTTGGTGAGCGAACCGATTGTTTGCTAACACATCAAACATGTTATATAATGTTGTTT 884 consensus_9692#1 ------------------------------------------------------------ consensus_9692#2 ------------------------------------------------------------ consensus_9692#3 ------------------------------------------------------------ consensus_9692#4 ------------------------------------------------------------ consensus_9692#0 ATTGTAGTAAAGCGTAATAGCTGTCGAACATTTTGGTCAAAAAAAAAAAAAAAAGGCCAC 944 consensus_9692#1 ------------------------------------------------------------ consensus_9692#2 ------------ consensus_9692#3 ------------ consensus_9692#4 ------------ consensus_9692#0 ATGTGCTCGAGC 956 consensus_9692#1 ------------ |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||