These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_97#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 508 fasta sequence [GACGATCGCCGAGAAGACCGCCATGAAGAGCGCCGTGAGGAACGTCGTGAGGAACGCCGTGAGGACCGCCGGGAGGATCGCCGCGAGGACCGCCGTGAAGACCGACGCGATACTACCCGTGAAGACAACCGCCAAAGCAGTGCTCGATGACCGAGTCGATGAACGTCATGAAGAACGCCGAACAGATCGCCTTAACGAGCACCGTGAAGAGCGACGAGACGAACGCCGGGAGGAGGGACGTGACAATCGAGATGATCGTCGTCAAGTCGTACACACAAAATTACGTTGAACAACGGTGCTAGAGGTGTATCAGTTACAGCCATTTAGAGGGATGATGTAAAGAGAGAAGAAAATGAATCAAATCAAATAACAGAACAAGAACACGTTTGCTGTGGCCTTCCCGAAATACAAGCCTCTTAGCAAAAGGACAGGAAGAAAGAAAAGACAGTTTACGCGTGAACACCACACCACCAACACCCAACACACCCCGCAGCCGCAGTGGTGCGCC] [+] EMBL BX617315 [GACGATCGCCGAGAAGACCGCCATGAAGAGCGCCGTGAGGAACGTCGTGAGGAACGCCGTGAGGACCGCCGGGAGGATCGCCGCGAGGACCGCCGTGAAGACCGACGCGATACTACCCGTGAAGACAACCGCCAAAGCAGTGCTCGATGACCGAGTCGATGAACGTCATGAAGAACGCCGAACAGATCGCCTTAACGAGCACCGTGAAGAGCGACGAGACGAACGCCGGGAGGAGGGACGTGACAATCGAGATGATCGTCGTCAAGTCGTACACACAAAATTACGTTGAACAACGGTGCTAGAGGTGTATCAGTTACAGCCATTTAGAGGGATGATGTAAAGAGAGAAGAAAATGAATCAAATCAAATAACAGAACAAGAACACGTTTGCTGTGGCCTTCCCGAAATACAAGCCTCTTAGCAAAAGGACAGGAAGAAAGAAAAGACAGTTTACGCGTGAACACCACACCACCAACACCCAACACACCCCGCAGCCGCAGTGGTGCGCC] consensusID : consensus_97#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 392 fasta sequence [CCGCCCACGCGTCCGACCGGATATCAAGAGCCCCCAGCAGCCAGATGCGCCGGCACCAACGCCGGTCACCACCGCCCCGGCCGTAGAGCGCCGATCGGTGCTATCGCTCAAGATCGACGACGATGCGCACGTGCGTCGGATGTTCGATAAGTTCCGGCACCATCATCGCCGTCAGTACGCTAGCTCGATGGAGCATGAGATGCGCTTCAACATCTTCCGCAACAATCTGTTCAAGATCGAGCAGCTGAACAAGTTCGAGCGCGGTACGGCCAAGTACGGTGTGACCAAGTTCGCCGACATGACGGGGGCCGAGTATCGGGCGCACACGGGGCTGGTGGTGCCGAAGCACGACCGCGCCAACCACGTCGGCAACCGGGTGGCCTCGGAGGAGG] [+] EMBL BM599883 [CCGCCCACGCGTCCGACCGGATATCAAGAGCCCCCAGCAGCCAGATGCGCCGGCACCAACGCCGGTCACCACCGCCCCGGCCGTAGAGCGCCGATCGGTGCTATCGCTCAAGATCGACGACGATGCGCACGTGCGTCGGATGTTCGATAAGTTCCGGCACCATCATCGCCGTCAGTACGCTAGCTCGATGGAGCATGAGATGCGCTTCAACATCTTCCGCAACAATCTGTTCAAGATCGAGCAGCTGAACAAGTTCGAGCGCGGTACGGCCAAGTACGGTGTGACCAAGTTCGCCGACATGACGGGGGCCGAGTATCGGGCGCACACGGGGCTGGTGGTGCCGAAGCACGACCGCGCCAACCACGTCGGCAACCGGGTGGCCTCGGAGGAGG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_97#0 GACGATCGCCGAGAAGACCGCCATGAAGAGCGCCGTGAGGAACGTCGTGAGGAAC--GCC 58 consensus_97#1 -----------------CCGCCC----ACGCGTCCGACCGGATATCAAGAGCCCCCAGCA 39 ***** *** * * * ** *** * ** consensus_97#0 GTGAGGACCGCCGGGAGGATCGCCGCGAGGACCGCCGTGAAGACCGACGCGATACTACCC 118 consensus_97#1 GCCAGATGCGCCGGCACCAACGCCG--GTCACCACCGCCCCGGCCGTAGAGCGCCGATCG 97 * ** ****** * * ***** *** *** * *** * * * * * consensus_97#0 GTGAAGACAACCGCCAAAGCAGTGCTCGATGACCGAGTCGATGAACGTCATGAAGAACGC 178 consensus_97#1 GTG----CTATCGCTCAAG-----ATCGACGACGATGCGCACGTGCGTC-----GGATGT 143 *** * * *** *** **** *** * * * **** * * * consensus_97#0 CGAACAGATCGCCTTAACGAGCACCGTGAAGAGCGACGAGACGAACGCCGGGAGGAGGGA 238 consensus_97#1 TCGATAAGTT-CCGGCACCATCATCGCCGTCAGT-ACGCTA-GCTCGATGGAGCATGAGA 200 * * * ** ** * ** ** ** *** * * ** ** * ** consensus_97#0 CGTGACAATCGAGATGATCGTCGTCAAGTCGTACACACAAAATTACGTTGAACAACGGTG 298 consensus_97#1 TGCGCT--TCAACATCTTCCGCAACAATCTGTTCAAGATCGAGCA-GCTGAACAAGTTCG 257 * * ** * ** ** * *** ** ** * * * ******* * consensus_97#0 CTAGAGGTGTA-TCAGTTACAGCC--ATTTAGAGGGATGATGTAAAGAGAGAAGAAAATG 355 consensus_97#1 AGCGCGGTACGGCCAAGTACGGTGTGACCAAGTTCGCCGACATGACGGGGGCCGAGTATC 317 * *** ** *** * * ** * ** * * * * * ** ** consensus_97#0 AATCAAATCAAA---TAACAGAACAAGAACACGTTTGCTGTGGCCTTCCCGAAATACAAG 412 consensus_97#1 GGGCGCACACGGGGCTGGTGGTGCCGAAGCACGACCGCGCCAACCACGTCGGCAACCGGG 377 * * * * * * **** ** ** ** * * * consensus_97#0 CCTCTTAGCAAAAGGACAGGAAGAAAGAAAAGACAGTTTACGCGTGAACACCACACCACC 472 consensus_97#1 TGGCCTCGGAGGAGG--------------------------------------------- 392 * * * * *** consensus_97#0 AACACCCAACACACCCCGCAGCCGCAGTGGTGCGCC 508 consensus_97#1 ------------------------------------ |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||