These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9701#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 1474 fasta sequence [CCGCCCACGCGTCCGGTTTTGTTGCGT-GATTTCTGCCCTGCACACCCGCTCAATTCTACAAC-TTTTTTTCGGCATTTTCACGGAAAGTAAGCGGCGGAAGCATTTGCAAAGTCTGGAGGAAAAATGCTCTCCCGAGCGTGTAGACTTGTGTCCAGGAATTCCTTACATGGAAGGGTTGTTTGTGTGCGGGAAGGAGCAGCAGTACCAACCAGTGTCCACCGAGGGCGCGATTACCACATTGCCTCGGGACATGCGACAGCCACCCTGCTAAACGCGAGGTTCTCCCCCGTCAAACCCATCACGGCTACAGTGCTGATGCGAAATCTCAGCACAGCCGATGGCGACAAAAGTGCGCTGCTGGAAACGATCCCGGAACCGCCCGCGATTCCACAGGCTGGCGCACCGGAGATTGCCGACATTGTGGCCGGTGCCGAGCCCGCCTTTTCCACGCTCGGACTGGGCGGCTGGACACCGGTCGGCATTGTGCAAAACTGCATGGAATTCCTGCACATCGGGCTCGACCTGCCGTGGTGGGGCTGCATCGCGATCGGTACGGTCTGCGTGCGAACGCTGCTGTTCCCGCTCGTCATTGCGTCCC-AGCGCAATG-CGGCCAAGATGAACAACTACATGCCACAGCTGCAGGTGCTGCAGATGAAGATGACCGAAGCGCGGCAGGCGGGCAATGCGATCGATTCCGCCCGCTACGGCCAGGAGATGGTGCTGTTCATGAAGGAGAAAAACCTGAACCCGCTCAAGAACATGCTCGTACCGCTGGCCCAGGCGCCGATCTTCATTTCCTTCTTTATGGGGTTGCGCGAGATGGCCAACACGCCGGTCGAGTCGATGCGCGACGGAGGGCTGTTTTGGTTCACGGATTTGACGATCTGCGACCAGTTCTATGCGCTACCGATCATCACCAGCTTGACGCTGTTCGCTACGATCGAGCTCGGCACGGACAGTGCGCGAATGTCGGCCGCCAACATGCAAACGGCCAAGTACATTCTGCGCGCACTGCCGCTGTTCATCTTCCCGTTCACGATCAATTTCCCGGGCGCCATTCTGTGCTACTGGGCGTGCAGTAACTTCTTCTCGCTAGTGCAGGTCGGCTT-CTGCGGATACCGAAGGTGCGCGACTTCTTCAAGATCGATCGTATCGTTACGCACAAACCGGAAACGCTGCCCATCAAGAAGAAGGGCTTTACCGATGGTATTAAAGAATCCTGGACCAACATGAAAATTAGCCGAGAGCTGGAGGAGCGAGCACGCATCGATGAGATTCGTTTCCAGAAGGCCGGCAAGGGACCGCTGGTGAAAACGTTCAAATACGACCCGACAGCACCACGAACGGGCACCTCCAGCGCGGTTAATGCGAAAAAGCGGTAATGCCCACGATCGGATAACTTCACACAGTGTAAAACCAAACCACTTCTACAGTAGCGTGCATGCAGTAATGCAATAAAACATCCAACTCCTGG] [+] EMBL BM597710 [CCGCCCACGCGTCCGGTTTTGTTGCGT GATTTCTGCCCTGCACACCCGCTCAATTCTACAAC TTTTTTTCGGCATTTTCACGGAAAGTAAGCGGCGGAAGCATTTGCAAAGTCTGGAGGAAAAATGCTCTCCCGAGCGTGTAGACTTGTGTCCAGGAATTCCTTACATGGAAGGGTTGTTTGTGTGCGGGAAGGAGCAGCAGTACCAACCAGTGTCCACCGAGGACGCGATTACCACATTGCCTCGGGACATGCGACAGCCACCCTGCTAAACGCGAGGTTCTCCCCCGTCAAACCCATCACGGCTACAGTGCTGATGCGAAATCTCAGCACAGCCGATGGCGACAAAAGTGCGCTGCTGGAAACGATCCCGGAACCGCCCGCGATTCCACAGGCTGGCGCACCGGAGATTGCCGACATTGTGGCCGGTGCCGAGCCCGCCTTTTCCACGCTCGGACTGGGCGGCTGGACACCGGTCGGCATTGTGCAAAACTGCATGGAATTCCTGCACATCGGGCTCGACCTGCCGTGGTGGGGCTGCATCGCGATCGGTACGGTCTGCGTGCGAACGCTGCTGTTCCCGCTCGTCATTGCGTCCC AGCGCAATGACGGCCAAGATGAACAACTACATGCCACAGCTGCAGGTGCTGCAGATGAAGATGA ] [+] EMBL CNS09DXE [ TTGTTGCGT GATTTCTGCCCTGCACACCCGCTCAATTCTACAAC TTTTTTTCGGCATTTTCACGGAAAGTAAGCGGC GAAACATTTTCAAAGTCTGGAGGAAAAATGCTCTCCCGAGCGTGTAGACTTGTGTACAGGAATTCCTTACATGGAAGGGTTGTTTGTGTGCGGGAAGGAGCAGCAGTACCAACCAGTGTCCACCGAGGGCGCGATTACCACATTGCCTCGGGACATGCGACA CCACCCTGCTAAACGCGAGGTTCTCCCCCGTCAAACCCATCACGGCTACAGTGCTGATGCGAAATCTCAGCACAGCCGATGGCGACAAAAGTGCGCTGCTGGAAACGATCCCGGAACCGCCCGCGATTCCACAGGCTGGCGCACCGGAGATTGCCGACATTGTGGCCGGTGCCGAGCCCGCCTTTTCCACGCTCGGACTGGGCGGCTGGACACCGGTCGGCATTGTGCAAAACTGCATGGAATTCCTGCACATCGGGCTCGACCTGCCGTGGTGGGGCTGCATCGCGATCGGTACGGTCTGCGTGCGAACGCTGCTGTTCCCGCTCGTCATTGCGTCCC AGCGCAATG CGGCCAAGATGAACAACTACATGCCACAGCTGCAGGTGCTGCAGATGAAGATGACCGAAGCGCGGCAGGCGGGCAATGCGATCGATTCCGCCCGCTACGGCCAGGAGATGGTGCTGTTCATGAAAAAAAAAAACCTGAACCCGCTCAAGAACATGCTCGTACCGCTGGCCCAGGCGCCGATCTTCATTTCCTTCTTTATGGGGTTGCGCGAGATGGCCAACACGCCGGTCGAGTCGATGCGCGACGGAGGGCTGTTTTGGTTCACGGATTTGACGATCTGCGACCAGTTCTATGCGCTACCGATCATCACCAGCTTGACGCTGTTCGCTACGATCGAGCTCGGCACGGACAGTGCGCGAATGTCGGCCGCCAACATGCAAACGGCCAAGTACATTCTGCGCGCACTGCCGCTGTTCATCTTCCCGTT ] [+] EMBL BM611286 [ ccgGCGT GATTTCTGCCCTGCACACCCGCTCAATTCTACAAC TTTTTTTCGGCATTTTCACGGAAAGTAAGCGGCGAAAGCATTTTCAAAGTCTGGAGGAAAAATGCTCTCCCGAGCGTGTAGACTTGTGTACAGGAATTCCTTACATGGAAGGGTTGTTTGTGTGCGGGAAGGAGCAGCAGTACCAACCAGTGTCCACCGAGGGCGCGATTACCACATTGCCTCGGGACATGCGACAGCCACCCTGCTAAACGCGAGGTTCTCCCCCGTCAAACCCATCACGGCTACAGTGCTGATGCGAAATCTCAGCACAGCCGATGGCGACAAAAGTGCGCTGCTGGAAACGATCCCGGAACCGCCCGCGATTCCACAGGCTGGCGCACCGGAGATTGCCGACATTGTGGCCGGTGCCGAGCCCGCCTTTTCCACGCTCGGACTGGGCGGCTGGACACCGGTCGGCATTGTGCAAAACTGCATGGAATTCCTGCACATCGGGCTCGACCTGCCGTGGTGGGGCTGCATCGCGATCGGTACGGTCTGCGTGCGAACGCTGCTGTTCCCGCTCGTCATTGCGTCCC AGCGCAATG CGGCCAAGATGAACAACTACATGCCACAGCTGCAGGTGCTGCAGATGAAGATGA CGAAa ] [+] EMBL BM623030 [ ccgcggacGCGTGGGTTTCTGCCCTGCACACCCGCTCAATTCTACAAC TTTTTTTCGGCATTTTCACGGAAAGTAAGCGGCGAAAGCATTTTCAAAGTCTGGAGGAAAAATGCTCTCCCGAGCGTGTAGACTTGTGTACAGGAATTCCTTACATGGAAGGGTTGTTTGTGTGCGGGAAGGAGCAGCAGTACCAACCAGTGTCCACCGAGGGCGCGATTACCACATTGCCTCGGGACATGCGACAGCCACCCTGCTAAACGCGAGGTTCTCCCCCGTCAAACCCATCACGGCTACAGTGCTGATGCGAAATCTCAGCACAGCCGATGGCGACAAAAGTGCGCTGCTGGAAACGATCCCGGAACCGCCCGCGATTCCACAGGCTGGCGCACCGGAGATTGCCGACATTGTGGCCGGTGCCGAGCCCGCCTTTTCCACGCTCGGACTGGGCGGCTGGACACCGGTCGGCATTGTGCAAAACTGCATGGAATTCCTGCACATCGGGCTCGACCTGCCGTGGTGGGGCTGCATCGCGATCGGTACGGTCTGCGTGCGAACGCTGCTGTTCCCGCTCGTCATTGCGTCCC AGCGCAATG CGGCCAAGATGAACAACTACATGCCACAGCTGCAGGTGCTGCAGATGAAGATGACCGAAGC ] [+] EMBL BM633794 [ ccg GATTTTTGCCCTGCACACCCGCTCAATTCTACAACTTTTTTTTCAGCATTTTCACTGAAAGTAAGCGGCAAAAGCATTTGCAAAGTCTGGAGGAAAAATGCTCTCCCGAGCGTGTAGACTTGTGTCCAGGAATTCCTTACATGGAAGGGTTGTTTGTGTGCGGGAAGGAGCAGCAGTACCAACCAGTGTCCACCGAGGGCGCGATTACCACATTGCCTCGGGACATGCGACAGCCACCCTGCTAAACGCGAGGTTCTCCCCCGTCAAACCCATCACGGCTACAGTGCTGATGCGAAATCTCAGCACAGCCGATGGCGACAAAAGTGCGCTGCTGGAAACGATCCCAGAACCGCCCGCGATTCCACAGGCTGGCGCACCGGAGATTGCCGACATTGTGGCCGGTGCCGAGCCCGCCTTTTCCACGCTCGGACTGGGCGGCTGGACACCGGTCGGCATTGTGCAAAACTGCATGGAATTCCTGCACATCGGGCTCGACCTGCCGTGGTGGGGCTGCATCGCGATCGGTACGGTCTGCGTGCGAACGCTGCTGT ] [+] EMBL BX617662 [ GCACACCCGCTCAATTCTACAACTTTTTTTTCGGCATTTTCACGGAAAGTAAGCGGCGAAAGCATTTGCAAAGTCTGGAGGAAAAATGCTCTCCCGAGCGTGTAGACTTGTGTCCAGGAATTCCTTACATGGAAGGGTTGTTTGTGTGCGGGAAGGAGCAGCAGTACCAACCAGTGTCCACCGAGGGCGCGATTACCACATTGCCTCGGGACATGCGACAGCCACCCTGCTAAACGCGAGGTTCTCCCCCGTCAAACCCATCACGGCTACAGTGCTGATGCGAAATCTCAGCACAGCCGATGGCGACAAAAGTGCGCTGCTGGAAACGATCCCGGAACCGCCCGCGATTCCACAGGCTGGCGCACCGGAGATTGCCGACATTGTGGCCGGTGCCGAGCCCGCCTTTTCCACGCTCGGACTGGGCGGCTGGACACCGGTCTGCATTGTGCAAAACTGCATGGAATTCCTGCACATCGGGCTCGACCTGCCGTGGTGGGGCTGCATCGCGATCGGTACGGTCTGCGTGCGAACGCTGCTGTTCCCGCTCGTCATTGCGTCCC AGCGCAATG CGGCCAAGATGAACAACTACATGCCACAGCTGCAGGTGCTGCAGATGAAGATGACCGAAGCGCGGCAGGCGGGCAATGCGATC ] [+] EMBL BM596290 [ ccgCCCGCTCAATTCTACAAC TTTTTTTCGGCATTTTCACGGAAAGTAAGCGGCGGAAGCATTTGCAAAGTCTGGAGGAAAAATGCTCTCCCGAGCGTGTAGACTTGTGTCCAGGAATTCCTTACATGGAAGGGTTGTTTGTGTGCGGGAAGGAGCAGCAGTACCAACCAGTGTCCACCGAGGGCGCGATTACCACATTGCCTCGGGACATGCGACAGCCACCCTGCTAAACGCGAGGTTCTCTCCCGTCAAACCCATCACGGCTACAGTGCTGATGCGAAATCTCAGCACAGCCGATGGCGACAAAAGTGCGCTGCTGGAAACGATCCCGGAACCGCCCGCGATTCCACAGGCTGGCGCACCGGAGATTGCCGACATTGTGGCCGGTGCCGAGCCCGCCTTTTCCACGCTCGGACTGGGCGGCTGGACACCGGTCGGCATTGTGCAAAACTGCATGGAATTCCTGCACATCGGGCTCGACCTGCCGTGGTGGGGCTGCATCGCGATCGGTACGGTCTGCGTGCGAACGCTGCTGTTCCCGCTt ] [+] EMBL BM599615 [ ccgCAATTCTACAAC TTTTTTTCGGCATTTTCACGGAAAGTAAGCGGCGGAAGCATTTGCATAGTCTGGAGGAAAAATGCTCTCCCGAGCGTGTAGACTTGTGTCCAGGAATTCCTTACATGGAAGGGTTGTTTGTGTGCGGGAAGGAGCAGCAGTACCAACCAGTGTCCACCGAGGGCGCGATTACCACATTGCCTCGGGACATGCGACAGCCACCCTGCTAAACGCGAGGTTCTCCCCCGTCAAACCCATCACGGCTACAGTGCTGATGCGAAATCTCAGCACAGCCGATGGCGACAAAAGTGCGCTGCTGGAAACGATCCCGGAACCGCCCGCGATTCCACAGGCTGGCGCACCGGAGATTGCCGACATTGTGGCCGGTGCCGAGCCCGCCTTTTCCACGCTCGGACTGGGCGGCTGGACACCGGTCGGCATTGTGCAAAACTGCATGGAATTCCTGCACATCGGGCTCGACCTGCCGTGGTGGGGCTGCATCGCGATCGGTACGGTCTGCGTGCGAACGCTGCTGTTCCCGCTCGTCATTGCGTCCC AGCGCAATG CGGCCAAGATGAA ] [+] EMBL BM652451 [ CTACAAC TTTTTTTCGGCATTTTCACGGAAAGTAAGCGGCGGAAGCATTTGCAAAGTCTGGAGGAAAAATGCTCTCCCGAGCGTGTAGACTTGTGTCCAGGAATTCCTTACATGGAAGGGTTGTTTGTGTGCGGGAAGGAGCAGCAGTACCAACCAGTGTCCACCGAGGGCGCGATTACCACATTGCCTCGGGACATGCGACAGCCACCCTGCTAAACGCGAGGTTCTCTCCCGTCAAACCCATCACGGC ] [+] EMBL BX627607 [ AGTAAGCGGCGGAAGCATTTGCAAAGTCTGGAGGAAAAATGCTCTCCCGAGCGTGTAGACTTGTGTCCAGGAATTCCTTACATGGAAGGGTTGTTTGTGTGCGGGAAGGAGCAGCAGTACCAACCAGTGTCCACCGAGGGCGCGATTACCACATTGCCTCGGGACATGCGACAGCCACCCTGCTAAACGCGAGGTTCTCTCCCGTCAAACCCATCACGGCTACAGTGCTGATGCGAAATCTCAGCACAGCCGATGGCGACAAAAGTGCGCTGCTGGAAACGATCCCGGAACCGCCCGCGATTCCACAGGCTGGCGCACCGGAGATTGCCGACATTGTGGCCGGTGCCGAGCCCGCCTTTTCCACGCTCGGACTGGGCGGCTGGACACCGGTCGGCATTGTGCAAAACTGCATGGAATTCCTGCACATCGGGCTCGACCTGCCGTGGTGGGGCTGCATCGCGATCGGTACGGTCTGCGTGCGAACGCTGCTGTTCCCGCTTGTCATTGCGTCCC AGCGCAATG CGGCCAAGATGAACAACTATATGCCACAGCTGCAGGTGCTGCAGATGAAGATGACCGAAGCGCGGCAGGCGGGCAATGCGATCGATTCCGCCCGCTACGGCCAGGAGATGGTGCTGTTCATGAAGGAGAAAAA CTGAACCCGCTCAA NACATGCTCGTAC ] [+] EMBL BX609611 [ ACGCGAGGTTCTCCCCCGTCAAACCCATCACGGCTACAGTGCTGATGCGAAATCTCAGCACAGCCGATGGCGACAAAAGTGCGCTGCTGGAAACGATCCCGGAACCGCCCGCGATTCCACAGGCTGGCGCACCGGAGATTGCCGACATTGTGGCCGGTGCCGAGCCCGCCTTTTCCACGCTCGGACTGGGCGGCTGGACACCGGTCGGCATTGTGCAAAACTGCATGGAATTCCTGCACATCGGGCTCGACCTGCCGTGGTGGGGCTGCATCGCGATCGGTACGGTCTGCGTGCGAACGCTGCTGTTCCCGCTCGTCATTGCGTCCC AGCGCAATG CGGCCAAGATGAACAACTACATG ] [-] EMBL CNS09DXF [ TCGACCTGCCGTGGTGGGGCTGCATCGCGATCGGTACGGTCTGCGTGCGAACGCTGCTGTTCCCGCTCGTCATTGCGTCCCAAGCGCAATG CGGCCAAGATGAACAACTACATGCCACAGCTGCAGGTGCTGCAGATGAAGATGACCGAAGCGCGGCAGGCGGGCAATGCGATCGATTCCGCCCGCTACGGCCAGGAGATGGTGCTGTTCATGAAGGAGAAAAACTTTTACCCGCTCAAGAACATGCTCGTACCGCTGGCCCAGGCGCCGATCTTCATTTCCTTCTTTATGGGGTTGCGCGAGATGGCCAACACGCCGGTCGAGTCGATGCGCGACGGAGGGCTGTTTTGGTTCACGGATTTGACGATCTGCGACCAGTTCTATGCGCTACCGATCATCACCAGCTTGACGCTGTTCGCTACGATCGAGCTCGGCACGGACAGTGCGCGAATGTCGGCCGCCAACATGCAAACGGCCAAGTACATTCTGCGCGAACTGCCGCTGTTCATCTTCCCGTTCACGATCAATTTCCCGGGCGCCATTCTGTGCTACTGGGCGTGCAGTAACTTCTTCTCGCTAGTGCAGGTCGGCTT CTGCGGATACCGAAGGTGCGCGACTTCTTCAAGATCGATCGTATCGTTACGCACAAACCGGAAACGCTGCCCATCAAGAAGAAGGGCTTTACCGATGGTATTAAAGAATCCTGGACCAACATGAAAATTAGCCGAGAGCTGGAGGAGCGAGCACGCATCGATGAGATTCGTTTCCAGAAGGCCGGCAAGGGACCGCTGGTGAAAACGTTCAAATACGACCCGACAGCACCACGAACGGGCACCTCCAGCGCGGTTAATGCGAAAAAGCGGTAATGCCCACGATCGGATAACTTCACACAGTGTAAAACCAAACCACTTCTACAGTAGCGTGCATGCAGTAATGCAATAAAACATCCAACTCCTGG] [+] EMBL BX616797 [ TCATGAAGGAGAAAAACCTGAACCCGCTCAAGAACATGCTCGTACCGCTGGCCCAGGCGCCGATCTTCATTTCTTTCTTTATGGGGTTGCGCGAGATGGCCAACACGCCGGTCGAGTCGATGCGCGACGGAGGGCTGTTTTGGTTCACGGATTTGACGATCTGCGACCAGTTCTATGCGCTACCGATCATCACCAGCTTGACGCTGTTCGCTACGATCGAGCTCGGCACGGACAGTGCGCGAATGTCGGCCGCCAACATGCAAACGGCCAAGTACATTCTGCGCGCACTGCCGCTGTTCATCTTTCCGTTCACGATCAATTTCCCGGGCGCCATTCTATGCTACTGGGCGTGCAGTAACTTCTTCTCGCTAGTGCAGGTCGGCTTCCTGCGGATACCGAAGGTGCGCGACTTCTTCAAGATCGATCGTATCGTTACGCACAAACCGGAAACACTTCCCATCAAGAAGAAGGGCTTTACCGATGGTATTAAAGAATCCTGGACCAACATGAAAATTAGCCGAGAGCTGGAGGAGCGAGCACGCATCGATGAGATTCGTTTCCAGAAGGCCGGCAAGGGACCGCTGGTGAAAACGTTCAAATACGACCCGACGGCACCACGAACGGGCACCTCCAGCGC ] consensusID : consensus_9701#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 767 fasta sequence [CGTTCAAAGTGGTTTAGAATTAATCTATGGCGCCCCTCCGAAGCCGTTGCATCATGCCCCATCTTACGGGTAGGTGTCTGGACCAGGTGGGCGAGAAGATGATCGGAAAAGTTGCTCGTGGAATAGCAAAACAAAGAATCGGTGCAGTACTGCTACTCCTGGTGCTTTCGCTTTCAAATGCCCATCACAGTGGAAAATGCAATGCCGTGTGGTGTATGTGGTGCTCCATTAGTGGTGCAGAAATCATTTTCACCCGATTCGATGATCTCAATTACACCACCGTGTCTCGTTAAAATGAGGGGTGGTCAGTGTGAAAAGCTCCTACGGTTCGTGAGACGCAAACGTTAAAGCAGCCCCCTCAAGAACCTCCTGTTCATGTGCGGAGAAATTGATTTTAATGCTAATTCAAATGGCCTTAAGCGATCGCGTCA--GTAGAGTGAACGAATAGCAATCGCTCTCGCCGGGGTCTGTTCTCGGCCTCTAAACGATAATGCACAACGCGGCTTGGGAGAGACAGTATGCACACATATGCGCATCGCCGTGTGCATCTTCGACCTTTTGCACAAATGTGCAGCCAGCCGGAGGACGACAACTGGAGTTGGTCTGGTTTTGTTGCCAGCCGGAGGAACGGGTCGTTTCTCGAGCGCACGCATCCGAGCACGCGGTGAACAAGCAGCTGACCGACAAGGAACGTGTGGCGGCCGCACTGGAAAACACGCACCTGATGGAGGTTATCAATCAGTGTATCGGAACGCCGTTGAAATAAA] [+] EMBL CNS09QRU [CGTTCAAAGTGGTTTAGAATTAATCTATGGCGCCCCTCCGAAGCCGTTGCATCATGCCCCATCTTACGGGTAGGTGTCTGGACCAGGTGGGCGAGAAGATGATCGGAAAAGTTGCTCGTGGAATAGCAAAACAAAGAATCGGTGCAGTACTGCTACTCCTGGTGCTTTCGCTTTCAAATGCCCATCACAGTGGAAAATGCAATGCCGTGTGGTGTATGTGGTGCTCCATTAGTGGTGCAGAAATCATTTTCACCCGATTCGATGATCTCAATTACACCACCGTGTCTCGTTAAAATGAGGGGTGGTCAGTGTGAAAAGCTCCTACGGTTCGTGAGACGCAAACGTTAAAGCAGCCCCCTCAAGAACCTCCTGTTCATGTGCGGAGAAATTGATTTTAATGCTAATTCAAATGGCCTTAAGCGATCGCGTCA GTAGAGTGAACGAATAGCAATCGCTCTCGCCGGGGTCTGTTCTCGGCCTCTAAACGATAATGCACAACGCGGCTTGGGAGAGACAGTATGCACACATATGCGCATCGCCGTGTGCATCTTCGACCTTTTGCACAAATGTGCAGCCAGCCGGAGGACGACAACTGGAGTTGGTCTGGTTTTGTTGCCAGCCGGAGGAACGGGTCGTTTCTCGAGCGCACGCATCCGAGCACGCGGTGAACAAGCAGCTGACCGACAAGGAACGTGTGGCGGCCGCACTGGAAAACACGCACCTGATGGAGGTTATCAATCAGTGTATCGGAACGCCGTTGAAATAAA] [-] EMBL CNS09QRV [ CGTGGAATAGCAAAACAAAGAATCGGTGCAGGAATGCTACTCCTGGTG TTTCGCTTTCAAATGCCCATCACAGTGGAAAATGAAATGCCCTGTGGTGTATTTGGTGCTCCATTAGTGGTGCAGAAATCATTTTTACCCGATTCGATGTTTTCAATTACACCACCCTTTCTCGTTAAAATGAGGGGTGGTCAGTGTGAAAAGCT CTACGGTTCGTGAGACGCAAACGTTAAAGCAGCCCCCTCAAGAACCTCCTGTTCATGTGCGGAGAAATTGATTTTAATGCTAATTCAAATGGCCTTAAGCGATCGCGTCAGCGTA AGTGAACGAATAGAAATTGCTCTCGCCG ] consensusID : consensus_9701#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 531 fasta sequence [CCCCGAGGTTTTGCTCGACCTGCCGTGGTGGGGCTGCATCGCGATCGGTACGGTCTGCGTGCGAACGCTGCTGTTCCCGCTCGTCATTGCGTCCCAGCGCAATGCGGCCAAGATGAACAACTACATGCCACAGCTGCAGGTGCTGCAGATAAGATGACCGAAGCGCGGCAGGCGGGCAATGCGATCGATTCCGCCCGCTACGGCCAGGAGATGGTGCTGTTCATGAAGGAGAAAAACCTGAACCCGCTCAAGAACATGCTCGTACCGCTGGCCCAGGCGCCGATCTTCATTTCTTTCTTTATGGGGTTGCGCGAGATGGCCAACACGCCGGTCGAGTCGATGCGCGACGGAGGGCTGTTTTGGTTCACGGATTTGACGATCTGCGACCAGTTCTATGCGCTACCGATCATCACCAGCTTGACGCTGTTCGCTACGATCGAGCTCGGCACGGACAGTGCGCGAATGTCCGGCGCAACATGCAAACGGNCAAGTACATTCTTGCGCGCACTGCCGCTGTTCATCTTTCCGTTC] [+] EMBL AL693728 [CCCCGAGGTTTTGCTCGACCTGCCGTGGTGGGGCTGCATCGCGATCGGTACGGTCTGCGTGCGAACGCTGCTGTTCCCGCTCGTCATTGCGTCCCAGCGCAATGCGGCCAAGATGAACAACTACATGCCACAGCTGCAGGTGCTGCAGATAAGATGACCGAAGCGCGGCAGGCGGGCAATGCGATCGATTCCGCCCGCTACGGCCAGGAGATGGTGCTGTTCATGAAGGAGAAAAACCTGAACCCGCTCAAGAACATGCTCGTACCGCTGGCCCAGGCGCCGATCTTCATTTCTTTCTTTATGGGGTTGCGCGAGATGGCCAACACGCCGGTCGAGTCGATGCGCGACGGAGGGCTGTTTTGGTTCACGGATTTGACGATCTGCGACCAGTTCTATGCGCTACCGATCATCACCAGCTTGACGCTGTTCGCTACGATCGAGCTCGGCACGGACAGTGCGCGAATGTCCGGCGCAACATGCAAACGGNCAAGTACATTCTTGCGCGCACTGCCGCTGTTCATCTTTCCGTTC] consensusID : consensus_9701#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 460 fasta sequence [ATCCGTTCGATGAGCGGGAAATCTTCGACATAATCCGCAACATCAATGATCCGGAACATCCTCTCACGCTGGAAGAACTGCACGTCCTGGAGCAGAGTCTCATCACGGTGGATAATGAGAAGAACATCGTCAACATCCTGTTCACACCGACCATCCCACACTGCAGCATGGCAACGCTGATCGGTCTCTCGATACGGGTGAAGCTTCTCCGGGCGCTGCCTCCGCGCTTCAAGGTGTCGGTAGAAATCAACCCCGGCACGCACGCATCCGAGCACGCGGTGAACAAGCAGCTGACCGACAAGGAACGTGTGGCGGCCGCACTGGAAAACACGCACCTGATGGAGGTTATCAATCAGTGTATCGGAACGCCGTTGAAATAAACCGAACCGAGGGCCCTGTTCCTCCAAGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCAAATTTTCCCAGGAG] [+] EMBL CNS08VWS [ATCCGTTCGATGAGCGGGAAATCTTCGACATAATCCGCAACATCAATGATCCGGAACATCCTCTCACGCTGGAAGAACTGCACGTCCTGGAGCAGAGTCTCATCACGGTGGATAATGAGAAGAACATCGTCAACATCCTGTTCACACCGACCATCCCACACTGCAGCATGGCAACGCTGATCGGTCTCTCGATACGGGTGAAGCTTCTCCGGGCGCTGCCTCCGCGCTTCAAGGTGTCGGTAGAAATCAACCCCGGCACGCACGCATCCGAGCACGCGGTGAACAAGCAGCTGACCGACAAGGAACGTGTGGCGGCCGCACTGGAAAACACGCACCTGATGGAGGTTATCAATCAGTGTATCGGAACGCCGTTGAAATAAACCGAACCGAGGGCCCTGTTCCTCCAAGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCAAATTTTCCCAGGAG] consensusID : consensus_9701#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 438 fasta sequence [ATCCGTTCGATGAGCGGGAAATCTTCGACATAATCCGCAACATCAACGATCCGGAACATCCTCTCACGCTGGAAGAACTGCACGTCCTGGAGCAGAGTCTCATCACGGTGGATAATGAGAAGAACATCGTCAACATCCTGTTCACACCGACCATCCCACACTGCAGCATGGCAACGCTGATCGGTCTCTCGATACGGGTGAAGCTTCTCCGGGCGCTGCCTCCGCGCTTCAAGGTGTCGGTAGAGATCAACCCCGGCACGCACGCATCCGAGCACGCGGTGAACAAGCAGCTGACCGACAAGGAACGTGTGGCGGCCGCACTGGAAAACACGCACCTGATGGAGGTTATCAATCAGTGTATCGGAACGCCGTTGAAATAAACCGAACCGAGGGCCCTGTTCCTCCAAGGAGTTGGATGTTTTATTGCATTACTGCATG] [+] EMBL BX609524 [ATCCGTTCGATGAGCGGGAAATCTTCGACATAATCCGCAACATCAACGATCCGGAACATCCTCTCACGCTGGAAGAACTGCACGTCCTGGAGCAGAGTCTCATCACGGTGGATAATGAGAAGAACATCGTCAACATCCTGTTCACACCGACCATCCCACACTGCAGCATGGCAACGCTGATCGGTCTCTCGATACGGGTGAAGCTTCTCCGGGCGCTGCCTCCGCGCTTCAAGGTGTCGGTAGAGATCAACCCCGGCACGCACGCATCCGAGCACGCGGTGAACAAGCAGCTGACCGACAAGGAACGTGTGGCGGCCGCACTGGAAAACACGCACCTGATGGAGGTTATCAATCAGTGTATCGGAACGCCGTTGAAATAAACCGAACCGAGGGCCCTGTTCCTCCAAGGAGTTGGATGTTTTATTGCATTACTGCATG] [+] EMBL BX615563 [ATCCGTTCGATGAGCTGGAAATCTTCGACATAATCCGCAACATCAACGATCCGGAACATCCTCTCACGCTGGAAGAACTGCACGTCCTGGAGCAGAGTCTCATCACGGTGGATAATGAGAAGAACATCGTCAACATCCTGTTCACACCGACCATCCCACACTGCAGCATGGCAACGCTGATCGGTCTCTCGATACGGGTGAAGCTTCTCCGGGCGCTGCCTCCGCGCTTCAAGGTGTCGGTAGAGATCAACCCCGGCACGCACGCATCCGAGCACGCGGTGAACAAGCAGCTGACCGACAAGGAACGTGTGGCGGCCGCACTGGAAAACACGCACCTGATGGAGGTTATCAATCAGTGTATCGGAACGCCGTTGAAATAAACCGAACCGA ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9701#3 ------------------------------------------------------------ consensus_9701#4 ------------------------------------------------------------ consensus_9701#0 CCGCCCACGCGTCCGGTTTTGTTGCGTGATTTCTGCCCTGCACACCCGCTCAATTCTACA 60 consensus_9701#2 ------------------------------------------------------------ consensus_9701#1 ------------------------------------------------------------ consensus_9701#3 ------------------------------------------------------------ consensus_9701#4 ------------------------------------------------------------ consensus_9701#0 ACTTTTTTTCGGCATTTTCACGGAAAGTAAGCGGCGGAAGCATTTGCAAAGTCTGGAGGA 120 consensus_9701#2 ------------------------------------------------------------ consensus_9701#1 ------------------------------------------------------------ consensus_9701#3 ------------------------------------------------------------ consensus_9701#4 ------------------------------------------------------------ consensus_9701#0 AAAATGCTCTCCCGAGCGTGTAGACTTGTGTCCAGGAATTCCTTACATGGAAGGGTTGTT 180 consensus_9701#2 ------------------------------------------------------------ consensus_9701#1 ------------------------------------------------------------ consensus_9701#3 ------------------------------------------------------------ consensus_9701#4 ------------------------------------------------------------ consensus_9701#0 TGTGTGCGGGAAGGAGCAGCAGTACCAACCAGTGTCCACCGAGGGCGCGATTACCACATT 240 consensus_9701#2 ------------------------------------------------------------ consensus_9701#1 ---CGTTCAAAGTGGTTTAGAATTAATCTATGGCGCCCCTCCGAAGCCGTTGCATCATGC 57 consensus_9701#3 ------------------------------------------------------------ consensus_9701#4 ------------------------------------------------------------ consensus_9701#0 GCCTCGGGACATGCGACAGCCACCCTGCTAAACGCGAGGTTCTCCCCCGTCAAACCCATC 300 consensus_9701#2 ------------------------------------------------------------ consensus_9701#1 CCCATCTTACGGGTAGGTGTCTGGACCAGGTGGGCGAGAAGATGATCGGAAAAGTTGCTC 117 consensus_9701#3 ------------------------------------------------------------ consensus_9701#4 ------------------------------------------------------------ consensus_9701#0 ACGGCTACAGTGCTGATGCGAAATCTCAGCACAGCCGATGGCGACAAAAGTGCGCTGCTG 360 consensus_9701#2 ------------------------------------------------------------ consensus_9701#1 GTGGAATAGCAAAACAAAGAATCGGTGCAGTACTGCTACTCCTGGTGCTTTCGCTTTCAA 177 consensus_9701#3 ------------------------------------------------------------ consensus_9701#4 ------------------------------------------------------------ consensus_9701#0 GAAACGATCCCGGAACCGCCCGCGATTCCACAGGCTGGCGCACCGGAGATTGCCGACATT 420 consensus_9701#2 ------------------------------------------------------------ consensus_9701#1 ATGCCCATCACAGTGGAAAATGCAATGCCGTGTGGTGTATGTGGTGCTCCATTAGTGGTG 237 consensus_9701#3 ------------------------------------------------------------ consensus_9701#4 ------------------------------------------------------------ consensus_9701#0 GTGGCCGGTGCCGAGCCCGCCTTTTCCACGCTCGGACTGGGCGGCTGGACACCGGTCGGC 480 consensus_9701#2 ------------------------------------------------------------ consensus_9701#1 CAGAAATCATTTTCACCCGATTCGATGATCTCAATTACACCACCGTGTCTCGTTAAAATG 297 consensus_9701#3 ------------------------------------------------------------ consensus_9701#4 ------------------------------------------------------------ consensus_9701#0 ATTGTGCAAAACTGCATGGAATTCCTGCACATCGGGCTCGACCTGCCGTGGTGGGGCTGC 540 consensus_9701#2 -----------------------CCCCGAGGTTTTGCTCGACCTGCCGTGGTGGGGCTGC 37 consensus_9701#1 AGGGGTGGTCAGTGTGAAAAGCTCCTACGGTTCGTGAGACGCAAACGTTAAAGCAGCCCC 357 consensus_9701#3 ------ATCCGTTCGATGA-GCGGGAAATCTTCGACATAATC-CGCAACATCAATGATCC 52 consensus_9701#4 ------ATCCGTTCGATGA-GCGGGAAATCTTCGACATAATC-CGCAACATCAACGATCC 52 consensus_9701#0 ATCGCGATCGGTACGGTCT-GCGTGCGAACGCTGCTGTTCCCGCTCGTCATTG-CGTCCC 598 consensus_9701#2 ATCGCGATCGGTACGGTCT-GCGTGCGAACGCTGCTGTTCCCGCTCGTCATTG-CGTCCC 95 consensus_9701#1 CTCAAGAACCTCCTGTTCATGTGCGGAGAAATTGATTTTAATGC-TAATTCAAATGGCCT 416 * * * * * * * * * * * * consensus_9701#3 GGAACA-TCCTCTCAC---GCTGGAAGAACTGCA--CGTCCTGGAGCAGAGTCTCATCAC 106 consensus_9701#4 GGAACA-TCCTCTCAC---GCTGGAAGAACTGCA--CGTCCTGGAGCAGAGTCTCATCAC 106 consensus_9701#0 AGCGCAATGCGGCCAA---GATG-AACAACTACA--TGCCACAGCTGCAGGT---GCTGC 649 consensus_9701#2 AGCGCAATGCGGCCAA---GATG-AACAACTACA--TGCCACAGCTGCAGGT---GCTGC 146 consensus_9701#1 TAAGCGATCGCGTCAGTAGAGTGAACGAATAGCAATCGCTCTCGC-CGGGGTCTGTTCTC 475 * * ** ** * ** ** * * ** * consensus_9701#3 GG----TGGATAATGA-GAAGAACATCGTC-----AACATCCTGTTCACACCGA--C-CA 153 consensus_9701#4 GG----TGGATAATGA-GAAGAACATCGTC-----AACATCCTGTTCACACCGA--C-CA 153 consensus_9701#0 AG----ATGAAGATGA-CCGAAGCGCGGCA-----GGCGGGCAATGCG-ATCGATTC-CG 697 consensus_9701#2 AG----AT-AAGATGA-CCGAAGCGCGGCA-----GGCGGGCAATGCG-ATCGATTC-CG 193 consensus_9701#1 GGCCTCTAAACGATAATGCACAACGCGGCTTGGGAGAGACAGTATGCACACATATGCGCA 535 * * ** * * * * * * * * * * consensus_9701#3 TCCCACACTGCAGCATGGCAACGCTGATCGGTCTCTCGATACGGGTGAAG-CTTCTCCGG 212 consensus_9701#4 TCCCACACTGCAGCATGGCAACGCTGATCGGTCTCTCGATACGGGTGAAG-CTTCTCCGG 212 consensus_9701#0 CCCGCTACGGCCAGGAGATGGTGCTGTTCATGAAGGAGAAAAACCTGAAC-CCGCTCAAG 756 consensus_9701#2 CCCGCTACGGCCAGGAGATGGTGCTGTTCATGAAGGAGAAAAACCTGAAC-CCGCTCAAG 252 consensus_9701#1 TCGCCGTGTGCATCTTCGACCTTTTGCACAAATGTGCAGCCAGCCGGAGGACGACAACTG 595 * ** ** * ** * * * consensus_9701#3 GCGCTGCCT---CCGCGCTTCAAGGTGTCGGTAGAAATCAACCCCGGCACGCACGCATCC 269 consensus_9701#4 GCGCTGCCT---CCGCGCTTCAAGGTGTCGGTAGAGATCAACCCCGGCACGCACGCATCC 269 consensus_9701#0 AACATGCTCGTACCGCTGGCCCAGGCGCCGATCTTCATTTCCTTCTTTATGGGGTTGCGC 816 consensus_9701#2 AACATGCTCGTACCGCTGGCCCAGGCGCCGATCTTCATTTCTTTCTTTATGGGGTTGCGC 312 consensus_9701#1 GAGTTGGTCTGGTTTTGTTGCCAGCCGGAGGAACGGGTCGTTTCTCGAGCGCACGCATCC 655 ** * ** * * * * * consensus_9701#3 GAGC------ACGCGGTGAACAAGCAGCTGACCGACAAGGAACG--TGTGGCGGCCGCAC 321 consensus_9701#4 GAGC------ACGCGGTGAACAAGCAGCTGACCGACAAGGAACG--TGTGGCGGCCGCAC 321 consensus_9701#0 GAGATGGCCAACACGCCGGTCGAGTCGATGCGCGACGGAGGGCTGTTTTGGTTCACGGAT 876 consensus_9701#2 GAGATGGCCAACACGCCGGTCGAGTCGATGCGCGACGGAGGGCTGTTTTGGTTCACGGAT 372 consensus_9701#1 GAGC------ACGCGGTGAACAAGCAGCTGACCGACAAGGAACG--TGTGGCGGCCGCAC 707 *** ** ** * * ** * ** **** * * * *** ** * consensus_9701#3 TGGAAAACACGCACCTGAT---GGAGGTTATCAATCAGTGT-ATCGGAACGCCGTTGAAA 377 consensus_9701#4 TGGAAAACACGCACCTGAT---GGAGGTTATCAATCAGTGT-ATCGGAACGCCGTTGAAA 377 consensus_9701#0 TTGACGATCTGCGACCAGTTCTATGCGCTACCGATCATCACCAGCTTGACGCTGTTCGCT 936 consensus_9701#2 TTGACGATCTGCGACCAGTTCTATGCGCTACCGATCATCACCAGCTTGACGCTGTTCGCT 432 consensus_9701#1 TGGAAAACACGCACCTGAT---GGAGGTTATCAATCAGTGT-ATCGGAACGCCGTTGAAA 763 * ** * ** * * * ** * **** * * **** *** consensus_9701#3 TAAACCGAACCGAGGGCCCTGTTCCTCCAAGGA-AAAAAAAAAAAAAAAAAAAAAAAAAA 436 consensus_9701#4 TAAACCGAACCGAGGGCCCTGTTCCTCCAAGGA-GTTGGATGTTTTATTGCATTACTGCA 436 consensus_9701#0 ACGATCGAGCT--CGGCACGGACAGTGCGCGAATGTCGGCCGCCAACATGCAAACGGCCA 994 consensus_9701#2 ACGATCGAGCT--CGGCACGGACAGTGCGCGAATGTCCGGCGC-AACATGCAAACGGNCA 489 consensus_9701#1 TAAA-------------------------------------------------------- 767 * consensus_9701#3 AAAAAGGCCAAATTTTCCCAGGAG------------------------------------ 460 consensus_9701#4 TG---------------------------------------------------------- 438 consensus_9701#0 AGTACATTCT-GCGCGCACTGCCGCTGTTCATCTTCCCGTTCACGATCAATTTCCCGGGC 1053 consensus_9701#2 AGTACATTCTTGCGCGCACTGCCGCTGTTCATCTTTCCGTTC------------------ 531 consensus_9701#1 ------------------------------------------------------------ consensus_9701#3 ------------------------------------------------------------ consensus_9701#4 ------------------------------------------------------------ consensus_9701#0 GCCATTCTGTGCTACTGGGCGTGCAGTAACTTCTTCTCGCTAGTGCAGGTCGGCTTCTGC 1113 consensus_9701#2 ------------------------------------------------------------ consensus_9701#1 ------------------------------------------------------------ consensus_9701#3 ------------------------------------------------------------ consensus_9701#4 ------------------------------------------------------------ consensus_9701#0 GGATACCGAAGGTGCGCGACTTCTTCAAGATCGATCGTATCGTTACGCACAAACCGGAAA 1173 consensus_9701#2 ------------------------------------------------------------ consensus_9701#1 ------------------------------------------------------------ consensus_9701#3 ------------------------------------------------------------ consensus_9701#4 ------------------------------------------------------------ consensus_9701#0 CGCTGCCCATCAAGAAGAAGGGCTTTACCGATGGTATTAAAGAATCCTGGACCAACATGA 1233 consensus_9701#2 ------------------------------------------------------------ consensus_9701#1 ------------------------------------------------------------ consensus_9701#3 ------------------------------------------------------------ consensus_9701#4 ------------------------------------------------------------ consensus_9701#0 AAATTAGCCGAGAGCTGGAGGAGCGAGCACGCATCGATGAGATTCGTTTCCAGAAGGCCG 1293 consensus_9701#2 ------------------------------------------------------------ consensus_9701#1 ------------------------------------------------------------ consensus_9701#3 ------------------------------------------------------------ consensus_9701#4 ------------------------------------------------------------ consensus_9701#0 GCAAGGGACCGCTGGTGAAAACGTTCAAATACGACCCGACAGCACCACGAACGGGCACCT 1353 consensus_9701#2 ------------------------------------------------------------ consensus_9701#1 ------------------------------------------------------------ consensus_9701#3 ------------------------------------------------------------ consensus_9701#4 ------------------------------------------------------------ consensus_9701#0 CCAGCGCGGTTAATGCGAAAAAGCGGTAATGCCCACGATCGGATAACTTCACACAGTGTA 1413 consensus_9701#2 ------------------------------------------------------------ consensus_9701#1 ------------------------------------------------------------ consensus_9701#3 ------------------------------------------------------------ consensus_9701#4 ------------------------------------------------------------ consensus_9701#0 AAACCAAACCACTTCTACAGTAGCGTGCATGCAGTAATGCAATAAAACATCCAACTCCTG 1473 consensus_9701#2 ------------------------------------------------------------ consensus_9701#1 ------------------------------------------------------------ consensus_9701#3 - consensus_9701#4 - consensus_9701#0 G 1474 consensus_9701#2 - consensus_9701#1 - |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||