These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9704#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 18 consensus length = 1594 fasta sequence [ATTTCAAACACACCGCGTTGCATCGGACAAAGTTCACGTCCCGCGACGTCGTTCCCCGTTCCGCGAAAGTGCACCGTACCAAACACTCACACACACACTTACACACACACGCCGCAGCCTTAATCCCTGAAAATCAGTGCCTGCATCGGTGAGTCGCACAGTTTATCTTCATCCGCAGTAGAGAGTCGCACCGCCCGTCGCTCCTGCGCTCCG-CCAACTTGATTTCGCGTGTGATTCCGTGCCCCAAAAAGGACTAACCATTGAACACAAGGACAGCAAAATGGCAAAACGGGCGGCCGGCTTTCTCATATTTCGCCGACTGCGCGAACGTATCGAGTATCTGATGCTGCAGGCATCGTACGGCCAGCATCACTGGTCGCCACCGAAAGGTCACGTCGATCCGGGGGAGGACGATTATGCGACGGCCCTGCGGGAAACGACCGAGGAAGCCGGATACGCCGAAAGTGACCTAAACATTCACCGGAAGCAATCGTGCACGCTCGAGTACAAAGTGAAGGGGCACGACAAGGTGGTCGTTTACTGGCTGGCGGAG-TGCGCAATCCCGCCCAGGAGGCGAAGCTG-TCCGACGAGCACCAGGACATGAAGTGGCTGGACTGTGATGAAGCGATCCAAATTGCGGGCTACGAAGACTTCGCGAAGATGGTACGCGCATTCGATGCTAAGATTAAGGCAAACGAGCTGTGAACG---------GCGGGGGGGGGGGG-TGGAGG-AGAGAGTGAAC--GTGTGTGTGTGTGTGATTGTGTGACCGCGTGTATGTGTGGTTGCGTGTTTCGATCGAGTACAAGTCTATTTATCCGTCTCTTGCACCGTCTCTTGTTCCGCGCTATGCAGTTTTACACGTATATCTCTATACATACATACATACATATATATACACACACATAGACACGTGCGCGCGCGCCAATCGCTTTCTCTAATTGGATAATTGACAATTATCGATTGTTCTCTATGACCTACTGTACTGTAAACTTTAGCCACGATTATATATGATATATGCCGAGTG-A-AAACTGTTCACTTTAAACCGAGCGAATAAATGAGAGTCATACTCTGACGACGATGATCGGGTTTGCTTAATTTTACGAGCTCTTTGACTACTGACGCGACGTCCACGTGCATTTATTGCTGCGTAACTGGTGCAACGCTATTGAACAACATTTACAAAAGTGGGGGGGGGTGTCC-TTCCCATCCTACCTGCCCTTCTTATGGTACGCACTGCGCTTTGGTTCACTTTCCACCTCCTCCCGCTCCAGCTCATCGTCCGTTTCGTCCTGCTCGTCCTGCTCCATCTCGCGCCGGTACAGCTCCTGAAACACTTCGTACTCTTCCAGCGTAACGTACGCCACCTTCACCGCGAACCGCTTGTCGCTCGTGTCCGTAATCTGGTGCAGCGGAGGATTGCCCGTCGGTGTGCTTTTCTCCGCCTTGAGCGACCGCGGCTTAAACAGTCCCAGCCGCTCCAGGAACGTGTGCCGGCAGCGCAAATGGTCCANATCGTGCGCAAAGGCGCTGGATTTCACCACCTCCAGTACCTCGTGGCGCATCGCCTGCAGCANGTAGGCGATCTTTGCCTCCGTCA] [+] EMBL AGA281395 [ATTTCAAACACGCCGCGTTGCATCGGACAAAGTTCACGTCCCGCGACGTCGTTCCCCGTTCCGCGAAAGTGCACCGTACCAAACACTCACACACACACTTACACACACACGCCGCAGCCTTAATCCCTGAAAATCAGTGCCTGCATCGGTGAGTCGCACAGTTTATCTTCATCCGCAGTAGAGAGTCGCACCGCCCGTCGCTCCTGCGCTCCG CCAACTTGATTTCGCGTGTGATTCCGTGCCCCAAAAAGGACTAACCATTGAACACAAGGACAGCAAAATGGCAAAACGGGCGGCCGGCTTTCTCATATTTCGCCGACTGCGCGAACGTATCGAGTATCTGATGCTGCAGGCATCGTACGGCCAGCATCACTGGTCGCCACCGAAAGGTCACGTCGATCCGGGGGAGGACGATTATGCGACGGCCCTGCGGGAAACGACCGAGGAAGCCGGATACGCCGAAAGTGACCTAAACATTCACCGGAAGCAATCGTGCACGCTCGAGTACAAAGTGAAGGGGCACGACAAGGTGGTCGTTTACTGGCTGGCGGAGCTGCGCAATCCCGCCCAGGAGGCGAAGCTG TCCGACGAGCACCAGGACATGAAGTGGCTGGACTGTGATGAAGC ] [+] EMBL CNS08XMC [ ACCGCGTTGCATCGGACAAAGTTCACGTCCCGCGACGTCGTTCCCCGTTCCGCGAAAGTGCACCGTACCAAACACTCACAAACACACTTACACACACACGCCGCAGCCTTAATCCCTGAAAATCAGTGCCTGCATCGGTGAGTCGCACAGTTTATCTTCATCCGCAGTAGAGAGTCGCACCGCCCGTCGCTCCTGCGCTCCG CCAACTTGATTTCGCGTGTGATTCCGTGCCCCAAAAAGGACTAACCATTGAACACAAGGACAGCAAAATGGCAAAACGGGCGGCCGGCTTTCTCATATTTCGCCGACTGCGCGAACGTATCGAGTATCTGATGCTGCAGGCATCGTACGGCCAGCATCACTGGTCGCCACCGAAAGGTCACGTCGATCCGGGGGGGGACGATTATGCGACGGCCCTGCGGGAAACGACCGAGGAAGCCGGATACGCCGAAAGTGACCTAAACATTCACCGGAAGCAATCGTGCACGCTCGAGTACAAAGTGAAGGGGCACGACAAGGTGGTCGTTTACTGGCTGGCGGAC TGCGCAATCCCGCCCAGGAGGCGAA CTG TCCGACGAGCACCAGGACATGAAGTGGCTGGACTGTGATGAAGCGATCCAAATTGCGGGCTACGAAGACTTCGCGAAGATGGTACGCGCATTCGATGCTAAGATTAAGGCAAACGAGCTGTGAACG GCGGGGGGGGGGGG TGGAGG AGAGAGTAAAC GTGTGTTTTTTTTTAATTTTTTAACCGCGTGTATTTTTGGTTGCGTtt ] [+] EMBL CNS0909J [ aaaaaGCGTTGCATCGGACAAAGTTCACGTCCCGCGACGTCGTTCCCCGTTCCGCGAAAGTGCACCGTACCAAACACTCACAAACACACTTACACACACACGCCGCAGCCTTAATCCCTGAAAATCAGTGCCTGCATCGGTGAGTCGCACAGTTTATCTTCATCCGCAGTAGAGAGTCGCACCGCCCGTCGCTCCTGCGCTCCG CCAACTTGATTTCGCGTGTGATTCCGTGCCCCAAAAAGGACTAACCATTGAACACAAGGACAGCAAAATGGCAAAACGGGCGGCCGGCTTTCTCATATTTCGCCGACTGCGCGAACGTATCGAGTATCTGATGCTGCAGGCATCGTACGGCCAGCATCACTGGTCGCCACCGAAAGGTCACGTCGATCCGGGGGAGGACGATTATGCGACGGCCCTGCGGGAAACGACCGAGGAAGCCGGATACGCCGAAAGTGACCTAAACATTCACCGGAAGCAATCGTGCACGCTCGAGTACAAAGTGAAGGGGCACGACAAGGTGGTCGTTTACTGGCTGGCGGAC TGCGCAATCCCGCCCAGGAGGCGAA CTG TCCGACGAGCACCAGGACATGAAGTGGCTGGACTGTGATGAAGCGATCCAAATTGCGGGCTACGAAGACTTCGCGAAGATGGTACGCGCATTCGATGCTAAGATTAAGGCAAACGAGCTGTGAACG GCGGGGGGGGGGGG TGGAGG AGAAATTAAAC GTTTTTTTTTTTTTAATTTTTTAACCcct ] [+] EMBL BX627277 [ CGTTGCATCGGACAAAGTTCACGTCCCGCGACGTCGTTCCCCGTTCCGCGAAAGTGCACCGTACCAAACACTCACACACACACTTACACACACACGCCGCAGCCTTAATCCCTGAAAATCAGTGCCTGTATCGGTGAGTCGCACAGTTTATCTTCATCCGCAGTAGAGAGTCGCACCGCCCGTCGCTCCTGCGCTCCG CCAACTTGATTTCGCGTGTGATTCCGTGCCCCAAAAAGGACTAACCATTGAACACAAGGACAGCAAAATGGCAAAACGGGCGGCCGGCTTTCTCATATTTCGCCGACTGCGCGAACGTATCGAGTATCTGATGCTGCAGGCTTCGTACGGCCAGCATCACTGGTCGCCACCGAAAGGTCACGTCGATCCGGGGGAGGACGATTATGCGACGGCCCTGCGGGAAACGACCGAGGAAGCCGGATACGCCGAAAGTGACCTAAACATTCACCGGAAGCAATCGTGCACGCTCGAGTACAAAGTGAAGGGGCACGACAAGGTGGTCGTTTACTGGCTGGCGGAGCTGCGCAATCCCGCCCAGGAGACGAAGCTG TCCGACGAGCACCAGGACATGAAGTGGCTGGACTGTGATGAAGCGATCCAAATTGCGGGCTACGAAGACTTCGCGAAGATGGTACGCGCATTCGATGCTAAGATTAAGGCAAA ] [+] EMBL CNS08D26 [ CGGACAAAGTTCACGTCCCGCGACGTTGTTCCCCGTTCCGCGAAAGTGCACCGTACCAAACACTCACAAACACACTTACACACACACGCCGCAGCCTTAATCCCTGAAAATCAGTGCCTGCATCGGTGAGTCGCACAGTTTATCTTCATCCGCAGTAGAGAGTCGCACCGCCCGTCGCTCCTGCGCTCCG CCAACTTGATTTCGCGTGTGATTCCGTGCCCCAAAAAGGACTAACCATTGAACACAAGGACAGCAAAATGGCAAAACGGGCGGCCGGCTTTCTCATATTTCGCCGACTGCGCGAACGTATCGAGTATCTGATGCTGCAGGCATCGTACGGCCAGCATCACTGGTCGCCACCGAAAGGTCACGTCGATCCGGGGGAGGACGATTATGCGACGGCCCTGCGGGAAACGACCGAGGAAGCCGGATACGCCGAAAGTGACCTAAACATTCACCGGAAGCAATCGTGCACGCTCGAGTACAAAGTGAAGGGGCACGACAAGGTGGTCGTTTACTGGCTGGCGGAC TGCGCAATCCCGCCCAGGAGGCGAA CTG TCCGACGAGCACCAGGACATGAAGTGGCTGGACTGTGATGAAGCGATCCAAATTGCGGGCTACGAAGACTTCGCGAAGATGGTACGCGCATTCGATGCTAAGATTAAGGCAAACGAGCTGTGAACG GCGGGGGGGGGGGG TGGAGG AGAAAGTAAAC GTTTTTTTTTTTTTTATTTTTTAACCGCGTTTATTTTTGGTTGCGTTTTTCGAT ] [+] EMBL CNS08RW5 [ GGACAAAGTTCACGTCCCGCGACGTCGTTCCCCGTTCCGCGAAAGTGCACCGTACCAAACACTCACAAACACACTTACACACACACGCCGCAGCCTTAATCCCTGAAAATCAGTGCCTGCATCGGTGAGTCGCACAGTTTATCTTCATCCGCAGTAGAGAGTCGCACCGCCCGTCGCTCCTGCGCTCCG CCAACTTGATTTCGCGTGTGATTCCGTGCCCCAAAAAGGACTAACCATTGAACACAAGGACAGGGAAATGGCAAAACGGGCGGCCGGCTTTCTCATATTTCGCCGACTGCGCGAACGTATCGAGTATCTGATGCTGCAGGCATCGTACGGCCAGCATCACTGGTCGCCACCGAAAGGTCACGTCAATCCGGGGGAGGACGATTATGCGACGGCCCTGCGGGAAACGACCGAGGGGGCCGGATACGCCGAAAGTGACCTAAACATTCACCGGAAGCAATCGTGCACGCTCGAGTACAAAGTGAAGGGGCACGACAAGGTGGTCGTTTACTGGCTGGCGGAC TGCGCAATCCCGCCCAGGAGGCGAA CTGTTCCGACGAGCACCAGGACATGAAGTGGCTGGACTGTGA ] [+] EMBL BM644517 [ ccgCACGTCCCGCGACGTCGTTCCCCGTTCCGCGAAAGTGCACCGTACCAAACACTCACACACACACTTACACACACACGCCGCAGCCTTAATCCCTGAAAATCAGTGCCTGTATCGGTGAGTCGCACAGTTTATCTTCATCCGCAGTAGAGAGTCGCACCGCCCGTCGCTCCTGCGCTCCG CCAACTTGATTTCGCGTGTGATTCCGTGCCCCAAAAAGGACTAACCATTGAACACAAGGACAGCAAAATGGCAAAACGGGCGGCCGGCTTTCTCATATTTCGCCGACTGCGCGAACGTATCGAGTATCTGATGCTGCAGGCTTCGTACGGCCAGCATCACTGGTCGCCACCGAAAGGTCACGTCGATCCGGGGGAGGACGATTATGCGACGGCCCTGCGGGAAACGACCGAGGAAGCCGGATACGCCGAAAGTGACCTAAACATTCACCGGAAGCAATCGTGCACGCTCGAGTACAAAGTGAAGGGGCACGACAAGGTGGTCGTTTACTGGCTGGCGGAGCTGCGCAATCCCGCCCAGGAGACGAAGCTG TCCGACGAGCACCAGGACATGAAGTGGCTGGACTGTGATGAAGCGATCCAAATTGCGGGCTACGAAG ] [+] EMBL BX605856 [ ACGTCGTTCCCCGTTCCGCGAAAGTGCACCGTACCAAACACTCACACACACACTTACACACACACGCCGCAGCCTTAATCCCTGAAAATCAGTGCCTGTATCGGTGAGTCGCACAGTTTATCTTCATCCGCAGTAGAGAGTCGCACCGCCCGTCGCTCCTGCGCTCCG CCAACTTGATTTCGCGTGTGATTCCGTGCCCCAAAAAGGACTAACCATTGAACACAAGGACAGCAAAATGGCAAAACGGGCGGCCGGCTTTCTCATATTTCGCCGACTGCGCGAACGTATCGAGTATCTGATGCTGCAGGCTTCGTACGGCCAGCATCACTGGTCGCCACCGAAAGGTCACGTCGATCCGGGGGAGGACGATTATGCGACGGCCCTGCGGGAAACGACCGAGGAAGCCGGATACGCCGAAAGTGACCTAAACATTCACCGGAAGCAATCGTGCACGCTCGAGTACAAAGTGAAGGGGCACGACAAGGTGGTCGTTTACTGGCTGGCGGAGCTGCGCAATCCCGCCCAGGAGACGAAGCTG TCCGACGAGCACCAGGACATGAAGTGGCTGGACTGTGATGAAGCGATCCAAATTGCGGGCTACGAAGACTTCGCGAAGATGGTACGCGCATTCGATGCTAAGA ] [+] EMBL BM590644 [ ccgCCCGTTCCGCGAAAGTGCACCGTACCAAACACTCACACACACACTTACACACACACGCCGCAGCCTTAATCCCTGAAAATCAGTGCCTGCATCGGTGAGTCGCACAGTTTATCTTCATCCGCAGTAGAGAGTCGCACCACCCGTCGCTCCTGCGCTCCG CCACCTTGATTTCGCGTGTGATTCCGTTCCCCAAAAAGGACTAACCATTGAACACAAGGACAGCAAAATGGCAAAACGGGCGGCCGGCTTTCTCATATTTCGCCGACTGCGCGAACGTATCGAGTATCTGATGCTGCAGGCATCGTACGGCCAGCATCACTGGTCGCCACCGAAAGGTCACGTCGATCCGGGGGAGGACGATTATGCGACGGCCCTGCGGGAAACGACCGAGGAAGCCGGATACGCCGAAAGTGACCTAAACATTCACCGGAAGCAATCGTGCACGCTCGAGTACAAAGTGAAGGGGCACGACAAGGTGGTCGTTTACTGGTTGGCGGAGCTGCGCAATCCCGCCCAGGAGGCGAAGCTG TCCGACGAGCACCAGGACATGAAGTGGCTGGACTGTGATGAAGCGATCCAAATTGCGGGCTA ] [-] EMBL CNS0909K [ GTCGCACCGCCCGTTGCTCCTGCG TCCG CCAACTTGTTTTCGCGTGTGATTCCGTGCCCCAAAAAGGACTAACCATTGAAAACAAGAACAGCAAAATGGCAAAACGGGCGGCCGGCTTTTTCATATTTCGCCGACTGCGCGAACGTATCGAGTTTCTGATGCTGCAGGCATCGTACGGCCAGCATAACTGGTCGCCACCGAAAGGTCACGTCGATCCGGGGGAGGACGATTATGCGACGG GCTGCGGGAAACGACCGAGGAAGCCGGATACGCCGAAAGTGACCTAAACATTCACCGGAAGAAATCGTGGACGCTCGAGTACAAAGTGAAGGGGCACGACAAGGTGGTCGTTTACTTGCTGGCGGAG TGCGAAATCCCGCCCAGGAGGCGAAGCTG TCCGACGAGCACCAGGACATGAAGTGGCTGAACTGTGATGAAGCGATCCAAATTGCGGGCTACGAAGACTTCGCGAAGGTGGTACGCGCATTCGATGCTAAGATTAAGGCAAACGAGCTGTGAACG GCGGGGGGGGGGGG TGGAGG AGAGAGTGAAC GTGTGTGTGTGTGTGATTGTGTGACCGCGTGTATGTGTGGTTGCGTGTTTCGATCGAGTACAAGTCTATTTATCCGTCTCTTGCACCGTCTCTTGTTCCGCGCTATGCAGTTTTACACGTATATCTCTATACATACATACATACATATATATAAACACACATAGAAACGTGCGCGCGCGCCAATCGCTTTCTCTAATTGGATAATTGACAATTATCGATTGTTCTCTATGACCTACTGTACTGTAAACTTTAGCCACGATTATATATGATATATGCCGAGTGTATAAACTGTTCACTTTAAACCGAGCG ] [+] EMBL BX611528 [ CCGCCCGTCGCTCCTGCGCTCCG CCAACTTGATTTCGCGTGTGATTCCGTGCCCCAAAAAGGACTAACCATTGAACACAAGGACAGCAAAATGGCAAAACGGGCGGCCGGCTTTCTCATATTTCGCCGACTGCGCGAACGTATCGAGTATCTGATGCTGCAGGCTTCGTACTGCCAGCATCACTGGTCGCCACCGAAAGGTCACGTCGATCCGGGGGAGGACGATTATGCGACGGCCCTGCGGGAAACGACCGAGGAAGCCGGATACGCCGAAAGTGACCTAAACATTCACCGGAAGCAATCGTGCACGCTCGAGTACAAAGTGAAGGGGCACGACAAGGTGGTCGTTTACTGGCTGGCGGAGCTGCGCAATCCCGCCCAGGAGACGAAGCTG TCCGACGAGCACCAGGACATGAAGTGGCTGGACTGTGATGAAGCGATCCAAATTGCGGGCTACGAAGACTTCGCGAAGATGGTACGCGCATTCG ] [-] EMBL CNS08XMD [ gTCCGCCCAACTTGTTTTCGCGTGTGATTCCGTGCCCCAAAAAGGACTAACCATTGAAAACAAGAACAGCAAAATGGCAAAACGGGCGGCCGGCTTTCTCATATTTCGCCGACTGCGCGAACGTATCGAGTTTCTGATGCTGCAGGCATCGTACGGCCAGCATAACTGGTCGCCACCGAAAGGTCACGTCGATCCGGGGGGGGACGATTATGCGACGG GCTGCGGGAAACGACCGAGGAAGCCGGATACGCCGAAAGTGACCTAAACATTCACCGGAAGCAATCGTGCACGCTCGAGTACAAAGTGAAGGGGCACGACAAGGTGGTCGTTTACTGGCTGGCGGAG TGCGCAATCCCGCCCAGGAGGCGAAGCTG TCCGACGAGCACCAGGACATGAAGTGGCTGGACTGTGATGAAGCGATCCAAATTGCGGGCTACGAAGACTTCGCGAAGATGGTACGCGCATTCGATGCTAAGATTAAGGCAAACGAGCTGTGAACG GCGGGGGGGGGGGG TGGAGG AGAGAGTGAAC GTGTGTGTGTGTGTGATTGTGTGACCGCGTGTATGTGTGGTTGCGTGTTTCGATCGAGTACAAGTCTATTTATCCGTCTCTTGCACCGTCTCTTGTTCCGCGCTATGCAGTTTTACACGTATATCTCTATACATACATACATACATATATATACACACACATAGACACGTGCGCGCGCGCCAATCGCTTTCTCTAATTGGATAATTGACAATTATCGATTGTTCTCTATGACCTACTGTACTGTAAACTTTAGCCACGATTATATATGATATATGCCGAGTG A AAACTGTTCACTTTAAACCGAGCGAATAAATGAGAGTCA ] [-] EMBL CNS08D27 [ CG CCCACTTGTTTTCGCGTGTGATTCCGTGCCCCAAAAAGGACTAACCATTGAACACAAGAACAGCAAAATGGCAAAACGGGCGGCCGGCTTTCTCATATTTCGCCGACTGCGCGAACGTATCGAGTTTCTGATGCTGCAGGCATCGTACGGCCAGCATAACTGGTCGCCACCGAAAGGTCACGTCGATCCGGGGGAGGACGATTATGCGACGG GCTGCGGGAAACGACCGAGGAAGCCGGATACGCCGAAAGTGACCTAAACATTCACCGGAAGCAATCGTGCACGCTCGAGTACAAAGTGAAGGGGCACGACAAGGTGGTCGTTTACTGGCTGGCGGAG TGCGCAATCCCGCCCAGGAGGCGAAGCTG TCCGACGAGCACCAGGACATGAAGTGGCTGGACTGTGATGAAGCGATCCAAATTGCGGGCTACGAAGACTTCGCGAAGATGGTACGCGCATTCGATGCTAAGATTAAGGCAAACGAGCTGTGAACG GCGGGGGGGGGGGG TGGAGG AGAGAGTGAAC GTGTGTGTGTGTGTGATTGTGTGACCGCGTGTATGTGTGGTTGCGTGTTTCGATCGAGTACAAGTCTATTTATCCGTCTCTTGCACCGTCTCTTGTTCCGCGCTATGCAGTTTTACACGTATATCTCTATACATACATACATACATATATATACACACACATAGACACGTGCGCGCGCGCCAATCGCTTTCTCTAATTGGATAATTGACAATTATCGATTGTTCTCTATGACCTACTGTACTGTAAACTTTAGCCACGATTATATATGATATATGCCGAGTG A AAACTGTTCACTTTAAACCGAGCGAATAA ] [-] EMBL BM606348 [ AGTGACCTAAACATTCACCGGAAGCAATCGTGCACGCTCGAGTACAAAGTGAAGGGGCACGACAAGGTGGTCGTTTACTGGCTGGCGGAGCTGCGCAATCCCGCCCAGGAGACGAAGCTG TCCGACGAGCCCCAGGACATGAAGTGGCTGGACTGTGATGAAGCGATCCAAATTGCGGGCTACGAAGACTTCGCGAAGATGGTACGCGCATTCGATGCTAAGATTAAGGCAAACGAGCTGTGAACGCCGGGGGAAGGGGGGGGGGGGGGTTGGAGGAAGAGAGTGGAC CGTGTGTGTGTGT TTGTGTGACCGCGTGTATGTGTGGTTGCGTGTTTCGATCGAGTACAAGTCTATTTATCCGTCTCTTGCACCGTCTCTTGTTCCGCGCTATGCAGTTTTACACGTATATCTCT ATACATACATACATATATATACACACACATAGACACGTGCGCGCGCGCCAATCGCTTTCTCTAATTGGATAATTGACAATTATCGATTGTTCTCTATGACCTACTGTACTGTAAACTTTAGCCACGATTATATATGATATATGCCGAGTG A AAACTGTTCACTTTAAACCGAGCGAATAAATGAGAGTCATACTCTGA ] [-] EMBL AGA283009 [ GGGGGGG TGGAGG AGAGTGTGGAC GTGTGTGTGTGTGT TTGTGTGACCGCGTGTATGTGTGGTTGCGTGTTTCGATCGAGTACAAGTCTATTTATCCGTCTCTTGCACCGTCTCTTGTTCCGCGCTATGCAGTTTTACACGTATATCTCT ATACATACATACATATATATACACACACATAGACACGTGCGCGCGCGCCAATCGCTTTCTCTAATTGGATAATTGACAATTATCGATTGTTCTCTATGACCTACTGTACTGTAAACTTTAGCCACGATTATATATGATATATGCCGAGTG A AAACTGTTCACTTTAAACCGAGCGAATAAATGAGAGTCATACTCTG ] [-] EMBL CNS08RW6 [ AGAGTGAACGTGTGTGTGTGTGTGTGATTGTGTGACCGCGTGTATGTGTGGTTGCGTGTTTCGACCGAGTACAAGTCTATTTATCCGTCTCTTGCACCGTCTCTTGTTCCGCGCTATGCAGTTTTACACGTATATCTCTATACATACATACATACATATATATACACACACAT ] [+] EMBL CNS09DR0 [ ttttttttTTTCGATCGAG CCAAGTCTATTTATCCGTCTCTTGCACCGTCTCTTGTTCCGCGCTATGCAGTTTTACACGTATATCTCTATACATACATACATACATATATATACACACACATAGACACGTGCGCGCGCGCCAATCGCTTTCTCTAATTGGATAATTGACAATTATCGATTGTTCTCTATGACCTACTGTACTGTAAACTTTAGCCACGATTATATATGATATATGCCGAGTG A AAACTGTTCACTTTAAACCGAGCGAATAAATGAGAGTCATACTCTGACGACGATGATCGGGTTTGCTTAATTTTACGAGCTCTTTGACTACTGACGCGACGTCCACGTGCATTTATTGCTGCGTAACTGGTGCAACGCTATTGAACAACATTTACAAAAGTGGGGGGGGGTGTCC TTCCCATCCTACCTGCCCTTCTTATGGTACGCACTGCGCTTTGGTTCACTTTCCACCTCCTCCCGCTCCAGCTCATCGTCCGTTTCGTCCTGCTCGTCCTGCTCCATCTCGCGCCGGTACAGCTCCTGAAACACTTCGTACTCTTCCAGCGTAACGTACGCCACCTTCACCGCGAACCGCTTGTCGCTCGTGTCCGTAATCTGGTGCAGCGGAGGATTGCCCGTCGGTGTGCTTTTCTCCGCCTTGAGCGACCGCGGCTTAAACAGTCCCAGCCGCTCCAGGAACG ] [+] EMBL BX621007 [ TATTGCTGCGTAACTGGTGCAACGCTATTGGACAACATTTAAATAAAAAAACGAAAGTCACCTTTCCCATCCTATCTGCCCTTCTTATGGTACGCACTGCGCTTTGGTTCACTTTCCACCTCCTCCCGCTCCAGCTCATCGTCCGTTTCGTCCTGCTCGTCCTGCTCCATCTCGCGCCGGTACAGCTCCTGAAACACTTCGTACTCTTCCAGCGTAACGTACGCCACCTTCACCGCGAACCGCTTGTCGCTCGTGTCCGTAATCTGGTGCAGCGGAGGATTGCCCGTCGGTGTGCTTTTCTCCGCCTTGAGCGACCGCGGCTTAAACAGTCCCAGCCGCTCCAGGAACGTGTGCCGGCAGCGCAAATGGTCCANATCGTGCGCAAAGGCGCTGGATTTCACCACCTCCAGTACCTCGTGGCGCATCGCCTGCAGCANGTAGGCGATCTTTGCCTCCGTCA] consensusID : consensus_9704#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1482 fasta sequence [GCAAGAATTGCCCGAGGGTTTCCTGCGACGTTGTTCCCCGTTCTGCGAAAGTGCACCTGTACCAAACACTCACACACACACTTACACACACACGCCGCAGCCTTAATCCCTGAAAATCAGTGCCTGTATCGGTGAGTCGCACAGTTTATCTTCATCCTGCAGTAGAGATGTCGCACCTGCGCCGTCTGCTCCTGCNGCTCCGGCAACTTTGATTTCGCGTGGTAGATTCCCTGTGCCCCAAAAAAAGGACTAAACCAATTTGAAAACCACCAATGGGGACCAGGGCCAAAANAATTGGGTGCACAAACACACCTGTNGTGGCCGTGCCCCGGGCATTNTACCTTACAATTAATTTTCACGGCCCGAAACTTTGGCGGCCNGGAACACCGGTTANTTTCGGAAGGGTTAATTCCTTGGACATTTGCCTTGGCAAGGGGCTTATTACCGGACTAACCNGGTGGCCCCAAGGCAAATCCCAAACCTCTTTGGTGGGGTTACCCTGTCACCCAAACACCCCGGGACANACACTGGGGGGTTTCCCCAACGCGGTTTTCCGGGAAATTTCCCCTCGTGGGTGTGGNGATGGACAAGNGTGGGACACCCGGANAACTTTNACATTTGCTTGCAACAACCTCGAGTGGGGNCCCCCCCTTTGGGTATCNGNGTCGGGCACACTAATACACNGGTACANCCNCCTGGNANTGTGANAAAATGGCCCCGGGTGGACTATTTAAAACCTGGGTCCCACCGGAGAATACAACACNTGGTNTTTTTAGTAAACNCCCNTTTTANAACTAGACAGCAGGCCAATTTTTATCCCAAANTACCCCTCGGGGTAGACAACATNGGGCCGACAAAATACCAAGNGTTTAGGGCTCGACTGNGGCCCTTTCCCCGGCAAAGGTATCAAACACANAAACACACNGGTTTATGGAGACACACTNCTGTCGGCTAGNAGCCATACACGCNGGACAACGTGCACAACATGTGGGATTNGGGGAGGGTAACCCCCAGNGGATNATTACNNANAACGANCTTTCGTGGGAGCCGTCATTCNTTTGGCGGACATGCGGTCGAAAACGGNTCCACCTTTTTTGNGCACTGAGGCCCACCAANAAGAGTTTTACGCCCCACGCCNCCNGGGGAGAGAACCACCCCCAAAAGGGGTGGCNTAACGATGCAAACACCTAGCGTGCANAGAACAACGNGACCACTTTTGTGGGTATTACACCCCCGAGNGAACAAGCNTGGAGAAAGTGNGGGCNATACAACNCCCACAAAGCGNTGGCGAACAGCCCACTGTTTTGGTACAACAACTGCATTTCATGNGATGGCCACATNTTGGTGGATNAACCACACCCGTTATGGGGATCNGTGCACACANATTTGCGGCCAACACAANGATCNACCGCAGTCANATCAAGATATTCCGACACCNAANAATCANCAAAACATTAAATGNGCACCCTACGANATGCAGGA] [+] EMBL AL693891 [GCAAGAATTGCCCGAGGGTTTCCTGCGACGTTGTTCCCCGTTCTGCGAAAGTGCACCTGTACCAAACACTCACACACACACTTACACACACACGCCGCAGCCTTAATCCCTGAAAATCAGTGCCTGTATCGGTGAGTCGCACAGTTTATCTTCATCCTGCAGTAGAGATGTCGCACCTGCGCCGTCTGCTCCTGCNGCTCCGGCAACTTTGATTTCGCGTGGTAGATTCCCTGTGCCCCAAAAAAAGGACTAAACCAATTTGAAAACCACCAATGGGGACCAGGGCCAAAANAATTGGGTGCACAAACACACCTGTNGTGGCCGTGCCCCGGGCATTNTACCTTACAATTAATTTTCACGGCCCGAAACTTTGGCGGCCNGGAACACCGGTTANTTTCGGAAGGGTTAATTCCTTGGACATTTGCCTTGGCAAGGGGCTTATTACCGGACTAACCNGGTGGCCCCAAGGCAAATCCCAAACCTCTTTGGTGGGGTTACCCTGTCACCCAAACACCCCGGGACANACACTGGGGGGTTTCCCCAACGCGGTTTTCCGGGAAATTTCCCCTCGTGGGTGTGGNGATGGACAAGNGTGGGACACCCGGANAACTTTNACATTTGCTTGCAACAACCTCGAGTGGGGNCCCCCCCTTTGGGTATCNGNGTCGGGCACACTAATACACNGGTACANCCNCCTGGNANTGTGANAAAATGGCCCCGGGTGGACTATTTAAAACCTGGGTCCCACCGGAGAATACAACACNTGGTNTTTTTAGTAAACNCCCNTTTTANAACTAGACAGCAGGCCAATTTTTATCCCAAANTACCCCTCGGGGTAGACAACATNGGGCCGACAAAATACCAAGNGTTTAGGGCTCGACTGNGGCCCTTTCCCCGGCAAAGGTATCAAACACANAAACACACNGGTTTATGGAGACACACTNCTGTCGGCTAGNAGCCATACACGCNGGACAACGTGCACAACATGTGGGATTNGGGGAGGGTAACCCCCAGNGGATNATTACNNANAACGANCTTTCGTGGGAGCCGTCATTCNTTTGGCGGACATGCGGTCGAAAACGGNTCCACCTTTTTTGNGCACTGAGGCCCACCAANAAGAGTTTTACGCCCCACGCCNCCNGGGGAGAGAACCACCCCCAAAAGGGGTGGCNTAACGATGCAAACACCTAGCGTGCANAGAACAACGNGACCACTTTTGTGGGTATTACACCCCCGAGNGAACAAGCNTGGAGAAAGTGNGGGCNATACAACNCCCACAAAGCGNTGGCGAACAGCCCACTGTTTTGGTACAACAACTGCATTTCATGNGATGGCCACATNTTGGTGGATNAACCACACCCGTTATGGGGATCNGTGCACACANATTTGCGGCCAACACAANGATCNACCGCAGTCANATCAAGATATTCCGACACCNAANAATCANCAAAACATTAAATGNGCACCCTACGANATGCAGGA] consensusID : consensus_9704#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 330 fasta sequence [GCAAGAATTGCCCGAGGTNNTACCGCGACGTCGTTCCCCGGTTCCGCGAAAGTGCACCGTACCAAACACTCACACACACACTTACACACACACGCCGCAGCCTTAATCCCTGAAAATCAGTGCCTGTATCGGTGAGTCGCACAGTTTATCTTCATCCGCAGTAGAGAGTCGCACCGGCCGTCGCTCCTGCGCTCCGGCAACTTGATTTCGCGTGTGATTCCGTGCCCCAAAAAGGACTAACCATTGAACACAAGGACATGCAAAATGGNAAAACGGGCTGGCGGCTTTCTCATATTTCGCCGACTGCGCGAACGTATCGAGTATCTGATG] [+] EMBL AL930121 [GCAAGAATTGCCCGAGGTNNTACCGCGACGTCGTTCCCCGGTTCCGCGAAAGTGCACCGTACCAAACACTCACACACACACTTACACACACACGCCGCAGCCTTAATCCCTGAAAATCAGTGCCTGTATCGGTGAGTCGCACAGTTTATCTTCATCCGCAGTAGAGAGTCGCACCGGCCGTCGCTCCTGCGCTCCGGCAACTTGATTTCGCGTGTGATTCCGTGCCCCAAAAAGGACTAACCATTGAACACAAGGACATGCAAAATGGNAAAACGGGCTGGCGGCTTTCTCATATTTCGCCGACTGCGCGAACGTATCGAGTATCTGATG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9704#0 ATTTCAAACACACCGCGTTGCATCGGACAAAGTTCACGTCCCGCGACGTCGTTCCCCG-T 59 consensus_9704#2 --------------GCAA-GAATTGCCCGAGGT---NNTACCGCGACGTCGTTCCCCGGT 42 consensus_9704#1 --------------GCAA-GAATTGCCCGAGGG---TTTCCTGCGACGTTGTTCCCCG-T 41 ** * ** * * * * * * ******* ******** * consensus_9704#0 TCCGCGAAAGTGCACC-GTACCAAACACTCACACACACACTTACACACACACGCCGCAGC 118 consensus_9704#2 TCCGCGAAAGTGCACC-GTACCAAACACTCACACACACACTTACACACACACGCCGCAGC 101 consensus_9704#1 TCTGCGAAAGTGCACCTGTACCAAACACTCACACACACACTTACACACACACGCCGCAGC 101 ** ************* ******************************************* consensus_9704#0 CTTAATCCCTGAAAATCAGTGCCTGCATCGGTGAGTCGCACAGTTTATCTTCATCC-GCA 177 consensus_9704#2 CTTAATCCCTGAAAATCAGTGCCTGTATCGGTGAGTCGCACAGTTTATCTTCATCC-GCA 160 consensus_9704#1 CTTAATCCCTGAAAATCAGTGCCTGTATCGGTGAGTCGCACAGTTTATCTTCATCCTGCA 161 ************************* ****************************** *** consensus_9704#0 GTAGAGA-GTCGCACC---GCCCGTCGCTCCTGCG-CTCCGCCAACTT-GATTTCGCGTG 231 consensus_9704#2 GTAGAGA-GTCGCACC---GGCCGTCGCTCCTGCG-CTCCGGCAACTT-GATTTCGCGTG 214 consensus_9704#1 GTAGAGATGTCGCACCTGCGCCGTCTGCTCCTGCNGCTCCGGCAACTTTGATTTCGCGTG 221 ******* ******** * * ******** ***** ****** *********** consensus_9704#0 T--GATTCC--GTGCCCCAAAAA--GGACTAA-CCA--TTGAACACAAG-GACA-GCAAA 280 consensus_9704#2 T--GATTCC--GTGCCCCAAAAA--GGACTAA-CCA--TTGAACACAAG-GACATGCAAA 264 consensus_9704#1 GTAGATTCCCTGTGCCCCAAAAAAAGGACTAAACCAATTTGAAAACCACCAATGGGGACC 281 ****** ************ ******* *** ***** ** * * * * consensus_9704#0 ATGGCAAAACGGGCGGCCGGCTTTCTCATATTTCGCCGACTGCGCGAACGTATCGAGTAT 340 consensus_9704#2 ATGGNAAAACGGGCTGGCGGCTTTCTCATATTTCGCCGACTGCGCGAACGTATCGAGTAT 324 consensus_9704#1 AGGGCCAAAANAATTG--GGTGCACAAACA---CACCTGTNGTGGCCGTGCCCCGGGCAT 336 * ** *** * ** * * * * ** * * * ** * ** consensus_9704#0 CTGATGCTGCAGGCA--TCGTACGGCCAGCATCACTGGTCGCCACCGAAAGGTCACGTCG 398 consensus_9704#2 CTGATG------------------------------------------------------ 330 consensus_9704#1 TNTACCTTACAATTAATTTTCACGGCCCGAAACTTTGGCGGCCN--GGAACACCGGTTAN 394 * consensus_9704#0 ATCCGGGGGAGGACGATTATGCGACG---GCCCTG-CGGGAAACG----ACCGAGGAAGC 450 consensus_9704#2 ------------------------------------------------------------ consensus_9704#1 TTTCGGAAGGGTTAATTCCTTGGACATTTGCCTTGGCAAGGGGCTTATTACCGGACTAAC 454 consensus_9704#0 CGGATACGCCGAAAGTGA--CCTAAACATTCACCG-GAAGCAATCGTGCACGCTCGAGTA 507 consensus_9704#2 ------------------------------------------------------------ consensus_9704#1 CNGGTGGCCCCAAGGCAAATCCCAAACCTCTTTGGTGGGGTTACCCTGT-CACCCAAACA 513 consensus_9704#0 CAAAGTGAAGGGGCACGACAAGGTGGTCGTTTACTGGCTGGCGGAGTGCGCAATCCCGCC 567 consensus_9704#2 ------------------------------------------------------------ consensus_9704#1 CCCCG-GGACANACACTGGGGGGTTTCCCCAACGCGGTTTTCCGGGA----AATTTCCCC 568 consensus_9704#0 CAGGAGGCGAAGCTGTCCGACGAGCACCAGG-ACATGAAGTGGCTGGACTGTGA--TGAA 624 consensus_9704#2 ------------------------------------------------------------ consensus_9704#1 TCGTGGGTGTGGNGATG-GACAAGNGTGGGACACCCGGANAACTTTNACATTTGCTTGCA 627 consensus_9704#0 GCGATCCAAATTGCGGGCTACGAAGACTTCGCGAAGATGGTACGCGCATTCGATGCTAAG 684 consensus_9704#2 ------------------------------------------------------------ consensus_9704#1 ACAACCTCGAGTGGGGNCCCCC---CCTTTGGGTATCNGNGTCGGGCACACTAATACACN 684 consensus_9704#0 ATTAAGGCAAACGAGCTGTGAACGGCGGGGGGGGGGGGTGGAGGAGAGAGTGAACGTGTG 744 consensus_9704#2 ------------------------------------------------------------ consensus_9704#1 GGTACANCCNCCTGGNANTGTGANAAAATGGCCCCGGGTGGACTATTTAA--AACCTGGG 742 consensus_9704#0 TGTGTGTGTGATTGTGTGACCGCGTGTATGTGTGGTTGCGTGTTTCGATCGAGTACAAGT 804 consensus_9704#2 ------------------------------------------------------------ consensus_9704#1 TCCCACCG-GAGAATACAACACNTGGTNTTTTTAGTAAAC--NCCCNTTTTANAACTAGA 799 consensus_9704#0 CTATTTATCCGTCTCTTGCACCGTCTCTTGTTCCGCGCTATGCAGTTTTACACGTATATC 864 consensus_9704#2 ------------------------------------------------------------ consensus_9704#1 C-AGCAGGCCAATTTTTATCCCAAANTACCCCTCGGGGTAGACAACATNGGGCCGACAA- 857 consensus_9704#0 TCTATACATACATACATACATATATATACACACACATAGACACGTGCGCGCGCGCCAATC 924 consensus_9704#2 ------------------------------------------------------------ consensus_9704#1 --AATAC---CAAGNGTTTAGGGCTCGACTGNGGCCCTTTCCCCGGCAAAGGTATCAAAC 912 consensus_9704#0 GCTTTCTCTAATTGGATAATTGACAATTATCGATTGTTCTCTATGACCTACTGTACTGTA 984 consensus_9704#2 ------------------------------------------------------------ consensus_9704#1 ACANAAACACACNGGTTTATGGAGACACA-CTNCTGTCGGCTAGNAGCCA-TACACGCNG 970 consensus_9704#0 AACTTTAGCCACGATTATATATGATATATGCCGAGTGAA----AACTGTTCACTTTAAAC 1040 consensus_9704#2 ------------------------------------------------------------ consensus_9704#1 GACAACGTGCACAAC-ATGTGGGATTNGGGGAGGGTAACCCCCAGNGGATNATTACNNAN 1029 consensus_9704#0 CGAGCGAATAAATGAGAGTCAT-ACTCTGACGACGATGATCGGGTTTGCTTAATTTTACG 1099 consensus_9704#2 ------------------------------------------------------------ consensus_9704#1 AACGANCTTTCGTGGGAGCCGTCATTCNTTTGGCGGACAT-GCGGTCGAAAACGGNTCCA 1088 consensus_9704#0 AGCTCTTTGACTACTGACGCGACGTCCACGTGCATTTATTGCTGCGTAACTGGTGCAACG 1159 consensus_9704#2 ------------------------------------------------------------ consensus_9704#1 CCTTTTTTGNGCACTGAGGCC-CACCAANAAGAGTTTTACGCCCCACGCCNCCNGGGG-- 1145 consensus_9704#0 CTATTGAACAACATTTACAAAAGTGGGGGGGGGTGTCCTTCCCATCCTACCTGCCCTTCT 1219 consensus_9704#2 ------------------------------------------------------------ consensus_9704#1 ----AGAGAACCACCCCCAAAAG--GGGTGGCNTAACGATGCAAAC--ACCTAGCGTGCA 1197 consensus_9704#0 TATGGTACGCACTGCGCTTTGGTTCACTTTCCACCTCCTCCCGCTCCAGCTCATCGTCCG 1279 consensus_9704#2 ------------------------------------------------------------ consensus_9704#1 NAGAACAACGNGACCACTTTTGTGGGTATTACACCCCCGAGNGAACAAGCNTGGAGAAAG 1257 consensus_9704#0 TTTCGTCCTGCTCGTCCTGCTCCATCTCGCGCCGGTACAGCTCCTGAAACACTTCGTACT 1339 consensus_9704#2 ------------------------------------------------------------ consensus_9704#1 TGNGGGCN---------------ATACAACNCCCACAAAGCGN-TGGCGAACAGCCCACT 1301 consensus_9704#0 CTTCCAGCGTAACGTACGCCACCTTCACCGCGAACCGCTTGTCGCTCGTGTCCGTAATCT 1399 consensus_9704#2 ------------------------------------------------------------ consensus_9704#1 GTTTTGGTACAACA-ACTGCATTTCATGNGATGGCCACATNTTGGTGGATNAACCACACC 1360 consensus_9704#0 GGTGCAGCGGAGGATTGCCCGTCGGTGTGCTTTTCTCCGCCTTGAGCGACCGCGGCTTAA 1459 consensus_9704#2 ------------------------------------------------------------ consensus_9704#1 CGTTATGGGGATCNGTGCACACANATTTGCGGC-CAACACAANGATCNACCGCAGTCANA 1419 consensus_9704#0 ACAGTCCCAGCCGCTCCAGGAACGTGTG-CCGGCAGCGCAAATGGTCCANATCGTGCGCA 1518 consensus_9704#2 ------------------------------------------------------------ consensus_9704#1 TCA-----AGATATTCCGACACCNAANAATCANCAAAACATTAAATGNGCACCCTACG-- 1472 consensus_9704#0 AAGGCGCTGGATTTCACCACCTCCAGTACCTCGTGGCGCATCGCCTGCAGCANGTAGGCG 1578 consensus_9704#2 ------------------------------------------------------------ consensus_9704#1 -ANATGCAGGA------------------------------------------------- 1482 consensus_9704#0 ATCTTTGCCTCCGTCA 1594 consensus_9704#2 ---------------- consensus_9704#1 ---------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||