Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 9707 cluster # 9707       Sequences # 20       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9707#0 length = 1196 sequences # 7  
consensus_9707#1 length = 990 sequences # 13  

consensusID : consensus_9707#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 7
consensus length = 1196
fasta sequence
                              [CCGCCCACGCGTCCGCCCACGCGTCCGCAACAAACCAAGTGAAAAATGCTGCTCTGCCCAATGTTGTGTAATTTTTCGGTGCCAAAATCGGTGTAAAACTCTTCGTGTTAGCATTTAACTCGTCTCTTTTCTT--AAAAAGAAAGGAATGCATACCGATCTATCCCCGCATTTACATTCAACTGAATGCAATCTCATCATCGAGGAGCTAAAAAAGTGCCACTCTGAGAATAAGTTCGCCAAGTTTCTTGGTATCTGCAATGATCTCGATCGGCAAATGATAGTGTGCTTGCGGAATGAACGCAAAACCAGACAGAAACTAAATCGCGAAAAAGCACTCGAAAAGCAGAAGCGTGTCCAACAGCTCATGCGAGAACATCAGGGATGATGATGATGGCGGCACCAACCTTAGAAGATTACTGGTACGAGGCGGAAACGCAGGAAATCTGCGGCGTAAAAGTCCCGTCAATTTT-AAACGATTTCATCGAAAATCAACCATCGATAGTAGAGCGCTTCTACACGAAGCTGTATTCCGTACCGCCGAACAAGACAGACGAACCGCAGCAGATACTGTTCCACTCCAACCGCATCTGTCTGGTGGGATTAGCAAAGGAGCATGTCGCATTTGAAAAGGGAATTCGGAGCA-TTAGCTTCGAGGTGGGCAAGTTCGACCGCAGCGAGAACAAGGTGTCGGGACGGAAGAAAAGCGGTGGAATGATCCTGCAGGCCGATTCCACGCTCGCCCTGGTGACCTGCGTGGACGGCAGCGTGTACAAGGTAAGATCGTGCGTGCAGGGGAAGCTGGTGGAGGTAAATGAGCGTATCGTTAGCCGGCCGGATCTGATGCGCACCAGCGGGGAAGGATACGTGGCCATAGTGATGCCCAAGATCGAGCATTGTGACGTGCTGAAGGAAAAGTTGTTGAGCGAGGAAGCGTACCGCGAGATGTGCGAAAAGAAATAAAGCTTG-TGGTTAAGAGTTAATGTT-GGATTAAAAAAAAGTATGATGTTAGCCGAAAATTAGCGAAGCGAAGTAGAGCTTGTAATTGTAAATTTTATCTTTTTAGTCTACTGCTTTTGCATCTTTGCATCAACTAACGCTCATCCTCACATTTTCAAACGTAACTTTAATTTACAAATAATTTTGTATAAGAGAAAACCTAAGGGACCAGATTTTCGCAGCTTATATGCGTCTCTCTC]

[+] EMBL BM614874             [CCGCCCACGCGTCCGCCCACGCGTCCGCAACAAACCAAGTGAAAAATGCTGCTCTGCCCAATGTTGTGTAATTTTTCGGTGCCAAAATCGGTGTAAAACTCTTCGTGTTTGCATTTAACTCGTCTCTTTTCTT  AAAAAGAAAGGAATGCATACCGATCTATCCCCGCATTTACATTCAACTGAATGCAATCTCATCATCGAGGAGCTAAAAAAGTGCCACTCTGAGAATAAGTTCGCCAAGTTTCTTGGTATCTGCAATGATCTCGATCGGCAAATGATAGTGTGCTTGCGGAATGAACGCAAAACCAGACAGAAACTAAATCGCGAAAAAGCACTCGAAAAGCAGAAGCGTGTCCAGCAGCTCATGCGAGAACATCAGGGATGATAACGATGTCGGCACCAACCTTAGAAGATTACTGGTACGAGGCGGAAACGCAGGAAATCTGCGGCGTAAAAGTCCCGTCAATTTT AAACGATTTCATCGAAAATCAACCATCGATAGTAGAGCGCTTCTACACGAAGCTGTATTCCGTACCACCGAACAAGACAGACGAGCCGCAGCAGATACTGTTCCACTCCAACCGCATCTGTCTGGTGGGATTAGCAAAGGAGCATGTCGCATTTGAGAAGGGAATTCGGAGCATTTAGCTTCGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BM644598             [                                        ccgAAATGCTGCTCTGCCCAATGTTGTGTAATTTTTCGGTGCCAAAATCGGTGTAAAACTCTTCGTGTTAGCATTTAACTCGTCTGGGGGCGG  AGAAAGAAAGGAATGCATACCGATCTATCCCCGCATTTACATTCAACTGAATGCAATCTCATCATCGAGGAGCTAAAAAAGTGCCACTCTGAGAATAAGTTCGCCAAGTTTCTTGGTATCTGCAATGATCTCGATCGGCAAATGATAGTGTGCTTGCGGAATGAACGCAAAACCAGACAGAAACTAAATCGCGAAAAAGCACTCGAAAAGGAGAGGGGTGTCCAACAGCTCATGCGAGAACATCAGGGATGATGATGATGGCGGCACCAACCTTAGAAGATTACTGGTACGAGGCGGAAACGCAGGAAATCTGCGGCGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BX609058             [                                                                                     AATCGGTGTAAAACTCTTCGTTTTTGCATTTAACTCGTCTCTTTTCTTTAAAAAAGAAAGGAATGCATACCGATCTATCCCCGCATTTACATTCAACTGAATGCAATCTCATCATCGAGGAGCTAAAAAAGTGCCACTCTGAGAATAAGTTCGCCAAGTTTCTCGGCATCTGCAATGATCTCGATCGGCAAATGATAGTGTGCTTGCGGAATGAACGCAAAACCAGACAGAAACTAAATCGCGAAAAAGCACTCGAAAAGCAGAAGCGTGTCCAGCAGCTCATGCGAGAACATCAGGGATGATGATGATGGCGGCACCAACCTTAGAAGATTACTGGTACGAGGCGGAAACGCAGGAAATCTGCGGCGTAAAAGTCCCGTCCATTTT AAACGATTTCATCAAAAATCAACCATCGATAGTAGAGCGCTTCTACACGAAGCTGTATTCCGTACCGCCGAACAAGACAGACGAGCCGCAGCAGATACTGTTCCACTCCAACCGCATCTGTCTGGTGGGATTAGCAAAGGAGCATGTTGCATTTGAGAAGGGAATTCGGAGCA TTAGCTTCGAGGTGGGCAAGTTCGACCGCAGCGAGAACAAGGTGTCGGGACGGAAGAAAAGCGGTGGAATGATCCTGCAGGCGGATTCCACGCTCGCCCTGGTGACCTGCGTGGACGGCAGCGTGTACAAGGTAAGATCGTGCGTGCAGGGGAAGCTGGTGGAGGTAAATGAGCGTATCGTTAGCCGGCCGGATCTGATGCGCACCAGCGGGG                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CNS092LT             [                                                                                              AAAACTCTTCGTGTTAGCATTTAACTCGTCTCTTTTCTT  AAAAAGAAAGGAATGCATACCGATCTATCCCCGCATTTACATTCAACTGAATGCAATCTCATCATCGAGGAGCTAAAAAAGTGCCACTCTGAGAATGGGTTCGCCAAGTTTCTTGGTATCTGCAATGATCTCGATCGGCAAATGATAGTGTGCTTGCGGAATGAACGCAAAACCAGACAGAAACTAAATCGCGAAAGAGCACTCGAAAAGCAGAAGCGTGTGCAACAGCTCATGCGAGAACATCAGGGATGATGATGATGGCGGCACCAACCTTAGAAGATTACTGGTACGAGGCGGAAACGCAGGAAATCTGCGGCGTAAAAGTCCCGTCAATTTT AAACGATTTCATCGAAAATCAACCATCGATAGTAGAGCGCTTCTACACGAAGCTGTATTCCGTACCGCCGAACAAGACAGACGAACCGCAGCAGATACTGTTCCACTCCAACCGCATCTGTCTGGTGGGATTAGCAAAGGAGCATGTGGCATTTAAAAAGGGAATTCGGAGCA TTAGCTTCGAGGTGGGCAAGTTCGACCGCAGCGAGAACAAGGTGTCGGGACGGAAGAAAAGCGGTGGAATGATCCTGCAGGCCGATTCCACGCTCGCCCTGGTGACCTGCGTGGACGGCAGCATGTACAAGGTAAGATCGTGCGTACAGGGGAAGCTGGTGGGGGTAAATGAGCGTATCGTTAGCCGGCCGGATCTGATGCGCACAAGCGGGGAAGGATACGTGGCCATAATTATGCCCAAAATCGAGCATTGTGACGTGCTGAAGGAAAAGTTGTTGAGCGAGGAAGCGTACCGCGAGAAGTGCGAAAAGAAATAAAGCTTG TGGTGAAGAGTTAATGTT GGATTAAAAAAAAGTATGATGTGAGCCGAAAA                                                                                                                                                                                    ]
[+] EMBL CNS09PFY             [                                                                                                         TGTTAGCATTTAACTCGTCTCTTTTCTT  AAAAAGAAAGGAATGCATACCGATCTATCCCCGCATTTACATTCAACTGAATGCAATCTCATCATCGAGGAGCTAAAAAAGTGCCACTCTGAGAATAAGTTCGCCAAGTTTCTTGGTATCTGCAATGATCTCGATCGGCAAATGATAGTGTGCTTGCGGAATGAACGCAAAACCAGACAGAAACTAAATCGCGAAAAAGCACTCGAAAAGCAGAAGCGTGTCCAACAGCTCATGCGAGAACATCAGGGATGATGATGATGGCGGCACCAACCTTAGAAGATTACTGGTACGAGGCGGAAACGCAGGAAATCTGCGGCGTAAAAGTCCCGTCAATTTT AAACGATTTCATCGAAAATCAACCATCGATAGTAGAGCGCTTCTACACGAAGCTGTATTCCGTACCGCCGAACAAGACAGACGAACCGCAGCAGATACTGTTCCACTCCAACCGCATCTGTCTGGTGGGATTAGCAAAGGAGCATGTCGCATTTGAAAAGGGAATTCGGAGCA TTAGCTTCGAGGTGGGCAAGTTCGACCGCAGCGAGAACAAGGTGTCGGGACGGAAGAAAAGCGGTGGAATGATCCTGCAGGCCGATTCCACGCTCGCCCTGGTGACCTGCGTGGACGGCAGCGTGTACAAGGTAAGATCGTGCGTGCAGGGGAAGCTGGTGGAGGTAAATGAGCGTATCGTTAGCCGGCCGGATCTGATGCGCACCAGCGGGGAAGGATACGTGGCCATAGTGATGCCCAAGATCGAGCATTGTGACGTGCTGAAGGAAAAGTTGTTGAGCGAGGTAGCGTACCGCGAGATGTGCGAAAAGAAATAAAGCTTGTTGTTTAAGAGTTAATGTTGGGATTAAAAAAAAGTATGATGTTAG                                                                                                                                                                                           ]
[-] EMBL CNS09PFZ             [                                                                                                                                                                                                                                                              CTGCAATGATCTCGATCGGCAAATGATAGTGTGCTTGCGGAATGAACGCAAAACCAAACAGAAACTAAATCGCGAAAAAGAACTCGAAAAGAAAAAGCGTGTCCAACAGTTCATGCGAGAACATCAGGGATGATGATGATGGCGGCACCAACCTTAGAAGATAACTGGTACGAGGCGGAAACGCAGGAAATCTGCGGCGTAAAAGTCCCGTCAATTTTAAAACGATTTCATCGAAAATCAACCATCGATAGTAGAGCGCTTCTACACGAAGCTGTATTCCGTACCGCCGAACAAAACAGACGAACCGCAGCAGATACTGTTCCACTCCAACCGCATCTTTCTGGTGGGATTAGCAAAGGAGCTTGTCGCATTTGAAAAGGGAATTCGGAGCA TTAGCTTCGAGGTGGGCAAGTTCGACCGCAGCGAGAACAAGGTGTCGGGACGGAAGAAAAGCGGTGGAATGATCCTGCAGGCCGATTCCACGCTCGCCCTGGTGACCTGCGTGGACGGCAGCGTGTACAAGGTAAGATCGTGCGTGCAGGGGAAGCTGGTGGAGGTAAATGAGCGTATCGTTAGCCGGCCGGATCTGATGCGCACCAGCGGGGAAGGATACGTGGCCATAGTGATGCCCAAGATCGAGCATTGTGACGTGCTGAAGGAAAAGTTGTTGAGCGAGGAA CGTACCGCGAGATGTGCGAAAAGAAATAAAGCTTG TTGTTAAGAGTAAATGTT GGATTAAAAAAAAGTATGATGTTAGCCGAAAATTAGCGAAGCGAAGTAGAGCTTGTAATTGTAAATTTTATCTTTTTAGTCTACTGCTTTTGCATCTTTGCATCAACTAACGCTCATCCTCACATTTTCAAACGTAACTTTAATTTACAAATAATTTTGTATAAGAGAAAACCTAAGGGACCAGATTTTCGCAGCTTATATGCGTCTCTC  ]
[-] EMBL CNS092LU             [                                                                                                                                                                                                                                                                                                                         AGAAACTCAATCGCGAAAAAGGACTCGAAAAGAATAAGCGTGTCCAACAGGTCATGCGAGAACATCAGGGATGATGATGATGGCGGCACCAACCTTAGAAGATTACTGGTACGAGGCGGAAACGCAGGAAATCTGCGGCGTAAAAGTCCCGTCAATTTTAAAACGATTTCATCGAAAATCAACCATCGATAGTAGAGCGCTTCTACACGAAGCTGTATTCCGTACCGCCGAACAAAACAGACGAACCGCAGTAGATACTGTTCCACTCCAACCGCATCTGTCTGGTGGGATTAGCAAAGGAGCATGTCGCATTTGAAAAGGGAATTCGGAGCA TTAGCTTCGAGGTGGGCAAGTTCGACCGCAGCGAGAACAAGGTGTCGGGACGGAAGAAAAGCGGTGGAATGATCCTGCAGGCCGATTCCACGCTCGCCCTGGTAACCTGCGTGGACGGCAGCGTGTACAAGGTAAGATCGTGCGTGCAGGGGAAGCTGGTGGGGGTAAATGAGCGTATCGTTAGCCGGCCGGATCTGATGCGCACCAGCGGGGAAGGATACGTGGCCATAGTGATGCCCAAGATCGAGCATTGTGACGTGCTGAAGGAAAAGTTGTTGAGCGAGGAAGCGTACCGCGAGATGTGCGAAAAGAAATAAAGCTTG TTGTTAAGAGTAAATGTT GGATTAAAAAAAAGTATGATGTTAGCCGAAAATTAGCGAAGCGAAGTAGAGCTTGTAATTGTAAATTTTATCTTTTTAGTCTACTGCTTTTGCATCTTTGCATCAACTAACGCTCATCCTCACATTTTCAAACGTAACTTTAATTTACAAATAATTTTGTATAAGAGAAAACCTAAGGGACCAGATTTTCGCAGCTTATATGCGTCTCTCTC]


>consensus_9707#0 CCGCCCACGCGTCCGCCCACGCGTCCGCAACAAACCAAGTGAAAAATGCTGCTCTGCCCA ATGTTGTGTAATTTTTCGGTGCCAAAATCGGTGTAAAACTCTTCGTGTTAGCATTTAACT CGTCTCTTTTCTTAAAAAGAAAGGAATGCATACCGATCTATCCCCGCATTTACATTCAAC TGAATGCAATCTCATCATCGAGGAGCTAAAAAAGTGCCACTCTGAGAATAAGTTCGCCAA GTTTCTTGGTATCTGCAATGATCTCGATCGGCAAATGATAGTGTGCTTGCGGAATGAACG CAAAACCAGACAGAAACTAAATCGCGAAAAAGCACTCGAAAAGCAGAAGCGTGTCCAACA GCTCATGCGAGAACATCAGGGATGATGATGATGGCGGCACCAACCTTAGAAGATTACTGG TACGAGGCGGAAACGCAGGAAATCTGCGGCGTAAAAGTCCCGTCAATTTTAAACGATTTC ATCGAAAATCAACCATCGATAGTAGAGCGCTTCTACACGAAGCTGTATTCCGTACCGCCG AACAAGACAGACGAACCGCAGCAGATACTGTTCCACTCCAACCGCATCTGTCTGGTGGGA TTAGCAAAGGAGCATGTCGCATTTGAAAAGGGAATTCGGAGCATTAGCTTCGAGGTGGGC AAGTTCGACCGCAGCGAGAACAAGGTGTCGGGACGGAAGAAAAGCGGTGGAATGATCCTG CAGGCCGATTCCACGCTCGCCCTGGTGACCTGCGTGGACGGCAGCGTGTACAAGGTAAGA TCGTGCGTGCAGGGGAAGCTGGTGGAGGTAAATGAGCGTATCGTTAGCCGGCCGGATCTG ATGCGCACCAGCGGGGAAGGATACGTGGCCATAGTGATGCCCAAGATCGAGCATTGTGAC GTGCTGAAGGAAAAGTTGTTGAGCGAGGAAGCGTACCGCGAGATGTGCGAAAAGAAATAA AGCTTGTGGTTAAGAGTTAATGTTGGATTAAAAAAAAGTATGATGTTAGCCGAAAATTAG CGAAGCGAAGTAGAGCTTGTAATTGTAAATTTTATCTTTTTAGTCTACTGCTTTTGCATC TTTGCATCAACTAACGCTCATCCTCACATTTTCAAACGTAACTTTAATTTACAAATAATT TTGTATAAGAGAAAACCTAAGGGACCAGATTTTCGCAGCTTATATGCGTCTCTCTC



consensusID : consensus_9707#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 13
consensus length = 990
fasta sequence
                              [GGCTGTCACCCAAACCAAGTGAAAAATGCTGCTCTGCCCAGTGTTGTGTAATTTTTCGGTGCC-AAAATCGGTGTAAAACTCTTCGTGTTTGCATTTAACTCGTCTCTTTTCTTAAAAAGAAAGGAATGCATACCGATCTATCCCCGCATTTACATTCAACTGAATGCAATCTCATCATCGAGGAGCTAAAAAAGTGCCACTCTGAGAATAAGTTCGCCAAGTTTCTTGGTATCTGCAATGATCTCGATCGGCAAATGATAGTGTGCTTGCGGAATGAACGCAAAACCAGACAGAAACTAAATCGCGAAAAAGCACTCGAAAAGCAGAAGCGTGTCCAGCAGCTCATGCGAGAACATCAGGGATGATAACGATGTCGGCACCAACCTTAGAAGATTACTGGTACGAGGCGGAAACGCAGGAAATCTGCGGCGTAAAAGTCCCGTCAATTTTAAACGATTTCATCGAAAATCAACCATCGATAGTAGAGCGCTTCTACACGAAGCTGTATTCCGTACCACCGAACAAGACAGA-CGAGCCGCAGCAGATACTGTTCCACTCCAACCGCATCTGTCTGGTGGGATTAGCAAAGGAGCATGTCGCATTTGAGAAGGGAATTCGGAGCATTAGCTTCGAGGTGGGCAAGTTCGACCGCAGCGAGAATAAGGTGTCGGGACGGAAGAAAAGCGGTGGAATGATCCTGCAGGCCGATTCCACGCTCGCCCTGGTGACCTGCGTGGACGGCAGCGTGTACAAGGTAAGATCGTGCGTGCAGGGGAAGCTGGTGGAGGTAAATGAGCGTATCGTCAACCGGCCGGATCTGATGCGCACCAGCGGGGAAGGCTACGTGGCCATAGTGATGCCCAAGATCGAGCATTGTGACGTGCTGAAGGAAAAGTTGTTGAGCGAGGAA--GTACCGCGAGATGTGCGAAAAGAAATAAAGCTTGTTGTTGAAGAGTAAAAAAAAAAAAAAAAGGCCACATGTGCCCGAGC]

[+] EMBL CNS098ES             [GGCTGTCACCCAAACCAAGTGAAAAATGCTGCTCTGCCCAGTGTTGTGTAATTTTTCGGTGCC AAAATCGGTGTAAAACTCTTCGTGTTTGCATTTAACTCGTCTCTTTTCTTAAAAAGAAAGGAATGCATACCGATCTATCCCCGCATTTACATTCAACTGAATGCAATCTCATCATCGAGGAGCTAAAAAAGTGCCACTCTGAGAATAAGTTCGCCAAGTTTCTTGGTATCTGCAATGATCTCGATCGGCAAATGATAGTGTGCTTGCGGAATGAACGCAAAACCAGACAGAAACTAAATCGCGAAAAAGCACTCGAAAAGCAGAAGCGTGTCCAGCAGCTCATGCGAGAACATCAGGGATGATAACGATGTCGGCACCAACCTTAGAAGATTACTGGTACGAGGCGGAAACGCAGGAAATCTGCGGCGTAAAAGTCCCGTCAATTTTAAACGATTTCATCGAAAATCAACCATCGATAGTAGAGCGCTTCTACACGAAGCTGTATTCCGTACCACCGAACAAGACAGA CGAGCCGCAGCAGATACTGTTCCACTCCAACCGCATCTGTCTGGTGGGATTAGCAAAGGAGCATGTCGCATTTGAGAAGGGAATTCGGAGCATTAGCTTCGAGGTGGGCAAGTTCGACCGCAGCGAGAATAAGGTGTCGGGACGGAAGAAAAGCGGTGGAATGATCCTGCAGGCCGATTCCACGCTCGCCCTGGTGACCTGCGTGGACGGCAGCGTGTACAAGGTAAGATCGTGCGTGCAGGGGAAGCTGGTGGAGGTAAATGAGCGTATCGTCAACCGGCCGGATCTGATGCGCACCAGCCGGGAAGGCTACGTGGCCATAGTGATGCCCAAGATCGAGCATTGTGACGTGCTGAAGGAAAAGTTGTTGAGCGAGGAAGCGTACCGCGAGATGTGCGAAAAGAAATAAAGCTTGTTGTTGAAGAGTAAAAAAAAAAAAAAAAGGCCACATGTGC      ]
[+] EMBL CNS098EG             [      CACCCCAACCAAGTGAAAAATGCTGCTCTGCCCAGTGTTGTGTAATTTTTCGGTGCC AAAATCGGTGTAAAACTCTTCGTGTTTGCATTTAACTCGTCTCTTTTCTTAAAAAGAAAGGAATGCATACCGATCTATCCCCGCATTTACATTCAACTGAATGCAATCTCATCATCGAGGAGCTAAAAAAGTGCCACTCTGAGAATAAGTTCGCCAAGTTTCTTGGTATCTGCAATGATCTCGATCGGCAAATGATAGTGTGCTTGCGGAATGAACGCAAAACCAGACAGAAACTAAATCGCGAAAAAGCACTCGAAAAGCAGAAGCGTGTCCAGCAGCTCATGCGAGAACATCAGGGATGATAACGATGTCGGCACCAACCTTAGAAGATTACTGGTACGAGGCGGAAACGCAGGAAATCTGCGGCGTAAAAGTCCCGTCAATTTTAAACGATTTCATCGAAAATCAACCATCGATAGTAGAGCGCTTCTACACGAAGCTGTATTCCGTACCACCGAACAAGACAGA CGAGCCGCAGCAGATACTGTTCCACTCCAACCGCATCTGTCTGGTGGGATTAGCAAAGGAGCATGTCGCATTTGAGAAGGGAATTCGGAGCATTAGCTTCGAGGTGGGCAAGTTCGACCGCAGCGAGAATAAGGTGTCGGGACGGAAGAAAAGCGGTGGAATGATCCTGCAGGCCGATTCCACGCTCGCCCTGGTGACCTGCGTGGACGGCAGCGTGTACAAGGTAAGATCGTGCGTACAGGGGAAGCTGGTGGAGGTAAATGAGCGTATCGTCAACCGGCCGGATCTGATGCGC                                                                                                                                                                      ]
[-] EMBL CNS098ET             [     aacaaCAAACCAAGTGAAAAATGCTGCTCTGCCCAGTGTTGTGTAATTTTTCGGTGCC AAAATCGGTGTAAAACTCTTCGTGTTTGCATTTAACTCGTCTCTTTTCTTAAAAAGAAAGGAATGCATACCGATCTATCCCCGCATTTACATTCAACTGAATGCAATCTCATCATCGAGGAGCTAAAAAAGTGCCACTCTGAGAATAAGTTCGCCAAGTTTCTTGGTTTCTGCAATGATCTCGATCGGCAAATGATAGTGTGCTTGCGGAATGAACGCAAAACCAGACAGAAACTAAATCGCGAAAAAGAACTCGAAAAGCAGAAGCGTGTCCAGCAGCTCATGCGAGAACATCAGGGATGATAACGATGTCGGCACCAACCTTAGAAGATAACTGGTACGAGGCGGAAACGCAGGAAATCTGCGGCGTAAAAGTCCCGTCAATTTTAAACGATTTCATCGAAAATCAACCATCGATAGTAGAGCGCTTCTACACGAAGCTGTATTCCGTACCACCGAACAAAACAGA CGAGCCGCAGCAGATACTGTTCCACTCCAACCGCATCTGTCTGGTGGGATTAGCAAAGGAGCATGTCGCATTTGAGAAGGGAATTCGGAGCATTAGCTTCGAGGTGGGCAAGTTCGACCGCAGCGAGAATAAGGTGTCGGGACGGAAGAAAAGCGGTGGAATGATCCTGCAGGCCGATTCCACGCTCGCCCTGGTGACCTGCGTGGACGGCAGCGTGTACAAGGTAAGATCGTGCGTGCAGGGGAAGCTGGTGGAGGTAAATGAGCGTATCGTCAACCGGCCGGATCTGATGCGCACCAGCGGGGAAGGCTACGTGGCCATAGTGATGCCCAAGATCGAGCATTGTGACGTGCTGAAGGAAAAGTTGTTGAGCGAGGAA  GTACCGCGAGATGTGCGAAAAGAAATAAAGC GGGTGTTGAAGAGTAAAAAA                            ]
[-] EMBL CNS096DQ             [                          TGCTGCTCTGCCCAGTGTTGTGTAATTTTTCGGTGCC AAAATCGGTGTAAAACTCTTCGTGTCTGCATTTAACTCGTCTCTTTTCTTAAAAAGAAAGGAATGCATACCGATCTATCCCCGCATTTACATTCAACTGAATGCAATCTCATCATCGAGGAGCTAAAAAAGTGCCACTCTGAGAATAAGTTCGCCAAGTTTCTTGGTTTCTGCAATGATCTCGATCGGCAAATGATAGTGTGCTTGCGGAATGAACGCAAAACCAGACAGAAACTTAATCGCGAAAAAGCACTCGAAAAGAAGAAGCGTGTCCAGCAGTTCATGCGAGAACATCAGGGATGATAACGATGTCGGCACCAACCTTAGAAGATTACTGGTACGAGGCGGAAACGCAGGCCCCCTGCGGCGTAAAAGTCCCGTCAATTTTAAACGATTTCATCGAAAATCAACCATCGATAGTAGAGCGCTTCTACACGAAGCTGTATTCCGTACCACCGAACAAAACAGA CGAGCCGCAGCAGATACTGTTCCACTCCAACCGCATCTTTCTGGTGGGATTAGCAAAGGAGCATGTCGCATTTGAGAAGGGAATTCGGAGCATTAGCTTCGAGGTGGGCAAGTTCGACCGCAGCGAGAATAAGGTGTCGGGACGGAAGAAAAGCGGTGGAATGATCCTGCAGGCCGATTCCACGCTCGCCCTGGTGACCTGCGTGGACGGCAGCGTGTACAAGGTAAGATCGTGCGTGCAGGGGAAGCTGGTGGAGGTAAATGAGCGTATCGTCAACCGGCCGGATTTGATGCGCACCAGCGGGGAAGGCTACGTGGCCATAGTGATGCCCAAGATCGAGCATTGTGACGTGCTGAAGGAAAAGTTGTTGAGCGAGGAA  GTACCGCGAGATGTGCGAAAAGAAATAAAGGAGGTTGTg                                         ]
[+] EMBL CNS096DP             [                            CTGCTCTGCCCAGTGTTGTGTAATTTTTCGGTGCC AAAATCGGTGTAAAACTCTTCGTGTCTGCATTTAACTCGTCTCTTTTCTTAAAAAGAAAGGAATGCATACCGATCTATCCCCGCATTTACATTCAACTGAATGCAATCTCATCATCGAGGAGCTAAAAAAGTGCCACTCTGAGAATAAGTTCGCCAAGTTTCTTGGTATCTGCAATGATCTCGATCGGCAAATGATAGTGTGCTTGCGGAATGAACGCAAAACCAGACAGAAACTAAATCGCGAAAAAGCACTCGAAAAGCAGAAGCGTGTCCAGCAGCTCATGCGAGAACATCAGGGATGATAACGATGTCGGCACCAACCTTAGAAGATTACTGGTACGAGGCGGAAACGCAGGAAATCTGCGGCGTAAAAGTCCCGTCAATTTTAAACGATTTCATCGAAAATCAACCATCGATAGTAGAGCGCTTCTACACGAAGCTGTATTCCGTACCACCGAACAAGACAGAGCGAGCCGCAGCAGATACTGTTCCACTCCAACCGCATCTGTCTGGTGGGATTAGCAAAGGAGCATGTCGCATTTGAGAAGGGAATTCGGAGCATTAGCTTCGAGGTGGGCAAGTTCGACCGCAGCGAGAATAAGGTGTCGGGACGGAAGAAAAGCGGTGGAATGATCCTGCAGGCCGATTCCACGCTCGCCCTGGTGACCTGCGTGGACGGCAGCGTGTACAAGGTAAGATCGTGCGTACAGGGGAAGCTGGTGGAGGTAAATGAGCGTATCGTCAACCGGCCGGATCTGATGCGCACCAGCGGGGAAGGCTACGTGGCCATAGTGATGCCCAAGATCGAGCATTGTGACGTGCTGAAGGAAAAGTTGTTGAGCGAGGAAGCGTACCGCGAGAAGTGCGAAAAGAAATAAAGCTTGTTGTTGAAGAGT AAAAAAAAAAAAAAAGGGCACATGTGCCCGAGC]
[+] EMBL CNS09KDV             [                                    CCCAATGTTGTGTAATTTTTCGGTGCC AAAATCGGCGTAAAACTCTTCGTGTTTGCATTTAACTCGTCTCTTTTCTTAAAAAGAAAGGAATGCATACCGATCTATCCCCGCATTTACATTCAACTGAATGCAATCTCATCATCGAGGAGCTAAAAAAGTGCCACTCTGAGAATAAGTTCGCCAAGTTTCTCGGCATCTGCAATGATCTCGATCGACAAATGATAGTGTGCTTGCGGAATGAACGCAAAACCAGACAGAAACTAAATCGCGAAAAAGCACTCGAAAAGCAGAAGCGTGTCCAGCAGCTCATGCGAGAACATCAGGGATGATAACGATGGCGGCACCAACCTTAGAAGATTACTGGTACGAGGCGGAAACGCAGGAAATCTGCGGCGTAAAAGTCCCGTCAATTTTAAACGATTTCATCGAAAATCAACCATCGATAGTAGAGCGCTTCTACACGAAGCTGTATTCCGTACCGCCGAACAAGACAGA TGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CNS08O3X             [                                        aTGTTGTGTAATTTTTCGGTGCC AAAATCGGTGT AAACTCTTCGTGTTTGCATTTAACTCGTCTCTTTTCTTAAAAAGAAAGGAATGCATACCGATCTATCCCCGCATTTACATTCAACTGAATGCAATCTCATCATCGAGGAGCTAAAAAAGTGCCACTCGGAGAATAAGTTCGCCAAGTTTCTTGGTATCTGCAATGATCTCGATCGGCAAATGATAGTGTGCTTGCGGAATGAACGCAAAACCAGACAGAAACTAAATCGCGAAAAAGCACTCGAAAAGCAGAAGCGTGTCCAGCAGCTCATGCGAGAACATCAGGGATGATAACGATGTCGGCACCAACCTTAGAAGATTACTGGTACGAGGCGGAAACGCAGGAAATCTGCGGCGTAAAAGTCCCGTCAATTTTAAACGATTTCATCGAAAATCAACCATCGATAGTAGAGCGCTTCTACACGAAGCTGTATTCCGTACCACCGAGCAAGACAGA CGAGCCGCAGCAGATACTGTTCCACTCCAACCGCATCTGTCTGGTGGGATTAGCAAAGGAGCATGTCGCATTTGAGAAGGGAATTCGGAGCATTAGCTTCGAGGTGGGCAAGTTCGACCGCAGCGAGAATAAGGTGTCGGGACGGAAGAAAAGCGGTGGAATGATCCTGCAGGCCGATTCCACGCTCGCCCTGGTGACCTGCGTGGACGGCAGCGTGTACAAGGTAAGATCGTGCGTGCAGGGGAAGCTGGTGGAGGTAAATGAGCGTATCGTCAACCGGCCGGATCTGATGCGCACCAGCGGGGAAGGCTACGTGGCCATAGTGATGCCCAAGATCGAGCATTGTGACGTGCTGAAGGAAAAGTTGTTGAGCGAGGAAGCGTACCGCGAGATGTGCGAAAAGAAATAAAGCTTGTTG                                           ]
[-] EMBL CNS08O3Y             [                                                    TTTTCGGTGCCAAAAATCGGTGTAAAACTCTTCGTGTTTGCATTTAACTCGTCTCTTTTCTTAAAAAGAAAGGAATGCATACCGATCTATCCCCGCATTTACATTCAACTGAATGCAATCTCATCATCGAGGAGCTAAAAAAGTGCCACTCGGAGAATAAGTTCGCCAAGTTTCTTGGTTTCTGCAATGATCTCGATCGGCAAATGATAGTGTGCTTGCGGAATGAACGCAAAACCAGACAGAAACTAAATCGCGAAAAAGCACTCGAAAAGCAGAAGCGTGTCCAGCAGCTCATGCGAGAACATCAGGGATGATAACGATGTCGGCACCAACCTTAGAAGATTACTGGTACGAGGCGGAAACGCAGGAAATCTGCGGCGTAAAAGTCCCGTCAATTTTAAACGATTTCATCGAAAATCAACCATCGATAGTAGAGCGCTTCTACACGAAGCTGTATTCCGTACCACCGAGCAAAACAGA CGAGCCGCAGCAGATACTGTTCCACTCCAACCGCATCTGTCTGGTGGGATTAGCAAAGGAGCATGTCGCATTTGAGAAGGGAATTCGGAGCATTAGCTTCGAGGTGGGCAAGTTCGACCGCAGCGAGAATAAGGTGTCGGGACGGAAGAAAAGCGGTGGAATGATCCTGCAGGCCGATTCCACGCTCGCCCTGGTGACCTGCGTGGACGGCAGCGTGTACAAGGTAAGATCGTGCGTGCAGGGGAAGCTGGTGGAGGTAAATGAGCGTATCGTCAACCGGCCGGATCTGATGCGCACCAGCGGGGAAGGCTACGTGGCCATAGTGATGCCCAAGATCGAGCATTGTGACGTGCTGAAGGAAAAGTT TTGAGCGAGGAA  GTACCGCGAGATGTGCGAAAAGAAATA                                                     ]
[+] EMBL CNS09DCV             [                                                                                                  ACTCGTCTCTTTTCTTAAAAAGAAAGGAATGCATACCGATCTATCCCCGCATTTACATTCAACTGAATGCAATCTCATCATCGAGGAGCTAAAAAAGTGCCACTCTGAGAATAAGTTCGCCAAGTTTCTTGGTATCTGCAATGATCTCGATCGGCAAATGATAGTGTGCTTGCGGAATGAACGCAAAACCAGACAGAAACTAAATCGCGAAAAAGCACTCGAAAAGCAGAAGCGTGTCCAGCAGCTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CNS09DCW             [                                                                                                                                                                                                                                                                                                                                                                                                               GGTACGAGGCGGAAACGCAGGAAATATGCGGCGTAAAAGTCCCGTCAATTTTAAACGATTTCATCGAAAATCAACCATCGATAGTAGAGCGCTTCTACACGAAGCTTTATTCCGTACCACCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CNS098EH             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TTCTACACGAAGCTGTATTCCGTACCACCGAACAAAACAGA CGAGCCGCAGCAGATACTGTTCCACTCCAACCGCATCTGTCTGGTGGGATTAGCAAAGGAGCATGTCGCATTTGAGAAGGGAATTCGGAGCATTAGCTTCGAGGTGGGCAAGTTCGACCGCAGCGAGAATAAGGTGTCGGGACGGAAGAAAAGCGGTGGAATGATCCTGCAGGCCGATTCCACGCTCGCCCTGGTGACCTGCGTGGACGGCAGCGTGTACAAGGTAAGATCGTGCGTGCAGGGGAAGCTGGTGGAGGTAAATGAGCGTATCGTCAACCGGCCGGATCTGATGCGCACCAGCGGGGAAGGCTACGTGGCCATAGTGATGCCCAAGATCGAGCATTGTGACGTGCTGAAGGAAAAGTTGTTGAGCGAGGAA  GTACCGCGAGATGTGCGAAAAGAAATAAAGCGTGTTGTTGAAGAGTAAAAAAA                           ]
[-] EMBL CNS09KDW             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ACAAAACAGA CGAGCCGCAGCAGATACTGTTCCACTCCAACCGCATCTTTCTGGTGGGATTAGCAAAGGAGCTTTTCGCATTTGAGAAGGGAATTCGGAGCATCAGCTTCGAGGTGGGAAAGTTCGACCGCAGCGAGAACAAGGTGTCGGGACGGAAGAAAAGCGGTGGAATGATCTTGCAGGCCGATTCAACGCTCGCCCTGGTGACCTGCGTGGACGGCAGCGTGTATAAGGTAAGATCGTGCGTGCAGGGGAAGCTGGTGGAGGTAAATGAGCGTATCGTCAGCCGGCCGGATCTGATGCGCACCAGCGGGGAAGGCTACGTGGCCATAGTGATGCCCAAGATTGAGCATTGTGACGTGCTGAAGGAAAAGTTGTTGAGCGAGGAA  GTACCGCGAGATGTGCGAAAAGAAATAAAG                                                  ]
[-] EMBL AGA281086            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GGTGTCGGGACGGAAGAAAAGCGGTGGAATGATCTTGCAGGCCGATTCAACGCTCGCCCTGGTGACCTGCGTGGACGGCAGCGTGTATAAGGTAAGATCGTGCGTGCAGGGGAAGCTGGTGGAGGTAAATGAGCGTATCGTCAGCCGGCCGGATCTGATGCGCACCAGCGGGGAAGGCTACGTGGCCATAGTGATGCCCAAGATTGAGCATTGTGACGTGCTGAAGGAAAAGTTGTTGAGCGAGGAAGCGTACCGCGAGATGTGCGAAAAGAAATAAAGCTTGTTGTT AAGAGTAAAAAAAA                          ]


>consensus_9707#1 GGCTGTCACCCAAACCAAGTGAAAAATGCTGCTCTGCCCAGTGTTGTGTAATTTTTCGGT GCCAAAATCGGTGTAAAACTCTTCGTGTTTGCATTTAACTCGTCTCTTTTCTTAAAAAGA AAGGAATGCATACCGATCTATCCCCGCATTTACATTCAACTGAATGCAATCTCATCATCG AGGAGCTAAAAAAGTGCCACTCTGAGAATAAGTTCGCCAAGTTTCTTGGTATCTGCAATG ATCTCGATCGGCAAATGATAGTGTGCTTGCGGAATGAACGCAAAACCAGACAGAAACTAA ATCGCGAAAAAGCACTCGAAAAGCAGAAGCGTGTCCAGCAGCTCATGCGAGAACATCAGG GATGATAACGATGTCGGCACCAACCTTAGAAGATTACTGGTACGAGGCGGAAACGCAGGA AATCTGCGGCGTAAAAGTCCCGTCAATTTTAAACGATTTCATCGAAAATCAACCATCGAT AGTAGAGCGCTTCTACACGAAGCTGTATTCCGTACCACCGAACAAGACAGACGAGCCGCA GCAGATACTGTTCCACTCCAACCGCATCTGTCTGGTGGGATTAGCAAAGGAGCATGTCGC ATTTGAGAAGGGAATTCGGAGCATTAGCTTCGAGGTGGGCAAGTTCGACCGCAGCGAGAA TAAGGTGTCGGGACGGAAGAAAAGCGGTGGAATGATCCTGCAGGCCGATTCCACGCTCGC CCTGGTGACCTGCGTGGACGGCAGCGTGTACAAGGTAAGATCGTGCGTGCAGGGGAAGCT GGTGGAGGTAAATGAGCGTATCGTCAACCGGCCGGATCTGATGCGCACCAGCGGGGAAGG CTACGTGGCCATAGTGATGCCCAAGATCGAGCATTGTGACGTGCTGAAGGAAAAGTTGTT GAGCGAGGAAGTACCGCGAGATGTGCGAAAAGAAATAAAGCTTGTTGTTGAAGAGTAAAA AAAAAAAAAAAAGGCCACATGTGCCCGAGC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9707#0      CCGCCCACGCGTCCGCCCACGCGTCCGCAACAAACCAAGTGAAAAATGCTGCTCTGCCCA 60
consensus_9707#1      -------------------GGCTGTCACC-CAAACCAAGTGAAAAATGCTGCTCTGCCCA 40
                                          **   * *  ******************************

consensus_9707#0      ATGTTGTGTAATTTTTCGGTGCCAAAATCGGTGTAAAACTCTTCGTGTTAGCATTTAACT 120
consensus_9707#1      GTGTTGTGTAATTTTTCGGTGCCAAAATCGGTGTAAAACTCTTCGTGTTTGCATTTAACT 100
                       ************************************************ **********

consensus_9707#0      CGTCTCTTTTCTTAAAAAGAAAGGAATGCATACCGATCTATCCCCGCATTTACATTCAAC 180
consensus_9707#1      CGTCTCTTTTCTTAAAAAGAAAGGAATGCATACCGATCTATCCCCGCATTTACATTCAAC 160
                      ************************************************************

consensus_9707#0      TGAATGCAATCTCATCATCGAGGAGCTAAAAAAGTGCCACTCTGAGAATAAGTTCGCCAA 240
consensus_9707#1      TGAATGCAATCTCATCATCGAGGAGCTAAAAAAGTGCCACTCTGAGAATAAGTTCGCCAA 220
                      ************************************************************

consensus_9707#0      GTTTCTTGGTATCTGCAATGATCTCGATCGGCAAATGATAGTGTGCTTGCGGAATGAACG 300
consensus_9707#1      GTTTCTTGGTATCTGCAATGATCTCGATCGGCAAATGATAGTGTGCTTGCGGAATGAACG 280
                      ************************************************************

consensus_9707#0      CAAAACCAGACAGAAACTAAATCGCGAAAAAGCACTCGAAAAGCAGAAGCGTGTCCAACA 360
consensus_9707#1      CAAAACCAGACAGAAACTAAATCGCGAAAAAGCACTCGAAAAGCAGAAGCGTGTCCAGCA 340
                      ********************************************************* **

consensus_9707#0      GCTCATGCGAGAACATCAGGGATGATGATGATGGCGGCACCAACCTTAGAAGATTACTGG 420
consensus_9707#1      GCTCATGCGAGAACATCAGGGATGATAACGATGTCGGCACCAACCTTAGAAGATTACTGG 400
                      ************************** * **** **************************

consensus_9707#0      TACGAGGCGGAAACGCAGGAAATCTGCGGCGTAAAAGTCCCGTCAATTTTAAACGATTTC 480
consensus_9707#1      TACGAGGCGGAAACGCAGGAAATCTGCGGCGTAAAAGTCCCGTCAATTTTAAACGATTTC 460
                      ************************************************************

consensus_9707#0      ATCGAAAATCAACCATCGATAGTAGAGCGCTTCTACACGAAGCTGTATTCCGTACCGCCG 540
consensus_9707#1      ATCGAAAATCAACCATCGATAGTAGAGCGCTTCTACACGAAGCTGTATTCCGTACCACCG 520
                      ******************************************************** ***

consensus_9707#0      AACAAGACAGACGAACCGCAGCAGATACTGTTCCACTCCAACCGCATCTGTCTGGTGGGA 600
consensus_9707#1      AACAAGACAGACGAGCCGCAGCAGATACTGTTCCACTCCAACCGCATCTGTCTGGTGGGA 580
                      ************** *********************************************

consensus_9707#0      TTAGCAAAGGAGCATGTCGCATTTGAAAAGGGAATTCGGAGCATTAGCTTCGAGGTGGGC 660
consensus_9707#1      TTAGCAAAGGAGCATGTCGCATTTGAGAAGGGAATTCGGAGCATTAGCTTCGAGGTGGGC 640
                      ************************** *********************************

consensus_9707#0      AAGTTCGACCGCAGCGAGAACAAGGTGTCGGGACGGAAGAAAAGCGGTGGAATGATCCTG 720
consensus_9707#1      AAGTTCGACCGCAGCGAGAATAAGGTGTCGGGACGGAAGAAAAGCGGTGGAATGATCCTG 700
                      ******************** ***************************************

consensus_9707#0      CAGGCCGATTCCACGCTCGCCCTGGTGACCTGCGTGGACGGCAGCGTGTACAAGGTAAGA 780
consensus_9707#1      CAGGCCGATTCCACGCTCGCCCTGGTGACCTGCGTGGACGGCAGCGTGTACAAGGTAAGA 760
                      ************************************************************

consensus_9707#0      TCGTGCGTGCAGGGGAAGCTGGTGGAGGTAAATGAGCGTATCGTTAGCCGGCCGGATCTG 840
consensus_9707#1      TCGTGCGTGCAGGGGAAGCTGGTGGAGGTAAATGAGCGTATCGTCAACCGGCCGGATCTG 820
                      ******************************************** * *************

consensus_9707#0      ATGCGCACCAGCGGGGAAGGATACGTGGCCATAGTGATGCCCAAGATCGAGCATTGTGAC 900
consensus_9707#1      ATGCGCACCAGCGGGGAAGGCTACGTGGCCATAGTGATGCCCAAGATCGAGCATTGTGAC 880
                      ******************** ***************************************

consensus_9707#0      GTGCTGAAGGAAAAGTTGTTGAGCGAGGAAGCGTACCGCGAGATGTGCGAAAAGAAATAA 960
consensus_9707#1      GTGCTGAAGGAAAAGTTGTTGAGCGAGGAAG--TACCGCGAGATGTGCGAAAAGAAATAA 938
                      *******************************  ***************************

consensus_9707#0      AGCTTGTGGTTAAGAGTTAATGTTGGATTAAAAAAAAGTATGATGTTAGCCGAAAATTAG 1020
consensus_9707#1      AGCTTGTTGTTGAAGAGTAA----AAAAAAAAAAAAAAGGCCACATGTGCCCGAGC---- 990
                      ******* *** *    ***      *  ********     *  *  ***  *      

consensus_9707#0      CGAAGCGAAGTAGAGCTTGTAATTGTAAATTTTATCTTTTTAGTCTACTGCTTTTGCATC 1080
consensus_9707#1      ------------------------------------------------------------
                                                                                  

consensus_9707#0      TTTGCATCAACTAACGCTCATCCTCACATTTTCAAACGTAACTTTAATTTACAAATAATT 1140
consensus_9707#1      ------------------------------------------------------------
                                                                                  

consensus_9707#0      TTGTATAAGAGAAAACCTAAGGGACCAGATTTTCGCAGCTTATATGCGTCTCTCTC 1196
consensus_9707#1      --------------------------------------------------------
                                                                              




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)