These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9708#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 17 consensus length = 1256 fasta sequence [TTTTTGAGGTAAAAAGAGTATTGATTGTTTATTGACGCGGCCGTGGTTCACTGATCTTTGAGAGCCTGAATGGTAACGCACCCT-AAATCCATGATTTGAATATATTCCGACCCTCCGCCATGTAATCGGAAGCAACATTCACCAAGCTTGTCACAGATCACTGCCTTTTGCTTTTCCGTAAGACCGTCATTGTACACGATGTACTCCGTCAGCTGCTCAAACAGCTGGCCCACGCTGTACGCATCGTACGACAGGTTTTGGACGTACTCCTCCAGCTTGCTGTAGTTGGAGCTTTTGCACACCGAGATGAATTCCTCCAGATAGCGTTCCGGCACCACGCCGGACATCTCCAGTATGTCCTGCCTTTCGATGCGCGCCTGGGCACCTTTCAGCCGGTGGCAAGATTGCAGCGTGGTAATCGCTCGCCGCAAATCGCCGCCGGAAATGTCCACAATGTCCTTG-TAAACGCCATCGTCCACAGTAACGCCCTCCTGGTCGCAGATGTAACGCAGCCGCTCGATGATCTTCTCCTCCCCCAGCGGCTTGAAACGAAACTTG-GTACAGCGCGATGTGATCGGTTCGATAATGCGCGACACGTAGTTGCACACCAGACAGAACCGTGTCGTTTTCGTTTCCTTCTCCATCGTGCGGCGCAGGGCGGCCTGCGCTGCGTGCGTCATCGCGTCGGCCTCATCCAGGATGACGATTTTGAACGGTGGACAGGGCTTAC-CGTCCGT-CCGCGTACCGCTCGCCGTTAGCTGGGCGAACGTTTTCACCTTGTTGCGAATGA-CCGCAATG-CCACGGTCGTCCGACGCATTCAGCTCGAGAATGCGCTCCTTGAACATGTCGCCGAACAGCTGTCTCGCCG-CCGCCAGGATTGTGCTGGTTTTACCGGTGCCGGGTGGTCCGTACAGCAGCAGATTCGGCAGATCGGTAGTGGAAAGGCTTTCGCGTAACACGGCAACCACTTCCGCTTGTTCCACCACATCGTCGACGCTTTTCGGCCGGTATTTTTCGACCCATGGTACGCTGTGCTTTGGTCGCTTGGTTGCTGTTGTTGTGCCGCTATCGCCGCCGGGGCCGGCTGCCGAGCTCTCGCCCGTTGTGCGACCAGTTTTCAGGAATGCTTGCATC-TTTGTGTTGTAAGAATGAACCAGGAAAAACGAGGTTTAACAAAATTAAGACAAAAAATGA-GAATAATGTACACACGACTTGAGTTTGTTTGCA-AGCGCGGGCGGGCATCTGGCTNAGGAATT] [+] EMBL CNS09GA6 [TTTTTGAGGTAAAAAGAGTATTGATTGTTTATGGACGCGGCCGTGGTTCACTGATCTTTGAGAGCCTGAATGGTAACGCACCCT AAATCCATGATTTGAATATATTCCGACCCTCCGCCATGTAATCGGAAGCAACATTCACCAAGCTTGTCACAGATCACTGCCTTTTGCTTTTCCGTAAGACCGTCATTGTACACGATGTACTCCGTCAGCTGCTCAAACAGCTGGCCCACGCTGTACGCATCGTACGACAGGTTTTGGACGTACTCCTCCAGCTTGCTGTAGTTGGAGCTTTTGCACACCGAGATGAATTCCTCCAGATAGCGTTCCGGCACCACGCCGGACATCTCCAGTATGTCCTGCCTTTCGATGCGCGCCTGGGCACCTTTCAGCCGGTGGCAAGATTGCAGCGTGGTAATCGCTCGCCGCAAATCGCCGCCGGAAATGTCCACAATGTCCTTG TAAACGCCATCGTCCACAGTAACGCCCTCCTGGTCGCAGATGTAACGCAGCCGCTCGATGATCTTCTCCTCCCCCAGCGGCTTGAAACGAAACTTG GTACAGCGCGA ] [-] EMBL BX615017 [ AGAGCATTGATTGTTTATTGACGCGGCCGTGGTTCACTGATCTTTGAGAGCCTGAATGGTAACGCACCCT AAATCCATGATTTGAATATATTCCGACCCTCCGCCATGTAATCGGAAGCAACATTCACCAAGCTTGTCACAGATCACTGCCTTTTGCTTTTCCGTAAGACCGTCATTGTACACGATGTACTCCGTCAGCTGCTCAAACAGCTGGCCCACGCTGTACGCATCGTACGACAGGTTTTGGACGTACTCCTCCAGCTTGCTGTAGTTGGAGCTTTTGCACACCGAGATGAATTCCTCCAGATAGCGTTCCGGCACCACGCCGGACATCTCCAGTATGTCCTGCCTTTCGATGCGCGCCTGGGCACCTTTCAGCCGGTGGCAAGACTGCAGCGTGGTAATCGCTCGCCGCAAATCGCCGCCGGAAATGTCCACAATGTCCTTG TAAACGCCATCGTCCACAGTAACGCCCTCCTGGTCGCAGATGTAACGCAGCCGCTCGATGATCTTCTCCTCCCCCAGCGGTTTGAAGCGAAA ] [+] EMBL CNS09EVY [ GATTGTTTATTGACGCGGCCGTGGTTCACTGATCTTTGAGAGCCTGAATGGTAACGCACCCT AAATCCATGATTTGAATATATTCCGACCCTCCGCCATGTAATCGGAAGCAACATTCACCAAGCTTGTCACAGATCACTGCCTTTTGCTTTTCCGTAAGACCGTCATTGTACACGATGTACTCCGTCAGCTGCTCAAACAGCTGGCCCACGCTGTACGCATCGTACGACAGGTTTTGGACGTACTCCTCCAGCTTGCTGTAGTTGGAGCTTTTGCACACCGAGATGAATTCCTCCAGATAGCGTTCCGGCACCACGCCGGACATCTCCAGTATGTCCTGCCTTTCGATGCGCGCCTGGGCACCTTTCAGCCGGTGGCAAGATTGCAGCGTGGTAATCGCTCGCCGCAAATCGCCGCCGGAAATGTCCACAATGTCCTTG TAAACGCCATCGTCCACAGTAACGCCCTCCTGGTCGCAGATGTAACGCAGCCGCTCGATGATCTTCTCCTCCCCCAGCGGCTTGAAACGAAACTTGTGTACAGCGCGATGTGATCGGTTCGATAATGCGCGACACGTAGTTGCACACCAGACAGAACCGTGTCGTTTTCGTTTCCTTCTCCATCGTGCGGCGCAGGGCGGCCTGCGCTGCGTGCGTCATCGCGTCGGCCTCATCCAGGATGACGATTTTGAACGGTGGACAGGGCTTAC CGTCCGT CCGCGTACCGCTCGCCGTTAGCTGGGCGAACGTTTTCACCTTGTTGCGAATTA CCGCAATG CCACGGTCGTCCGACGCATTCAGCTCGAGAATGCGCTCCTTGAACATGTCGCCGAACAGCTGTCTCGCCG CCGCCAGGATTGTGCTGGTTTTACCGGTGCCGGGTGGTCCGTACAGCAGCAGAATCGGCAGAACGGTAGTTGAAAGGCTTTCGCGTAACACGGCAACCAC ] [+] EMBL CNS09LNP [ GATTGTTTATTGACGCGGCCGTGGTTCACTGATCTTTGAGAGCCTGAATGGTAACGCACCCT AAATCCATGATTTGAATATATTCCGACCCTCCGCCATGTAATCGGAAGCAACATTCACCAAGCTTGTCACAGATCACTGCCTTTTGCTTTTCCGTAAGACCGTCATTGTACACGATGTACTCCGTCAGCTGCTCAAACAGCTGGCCCACGCTGTACGCATCGTACGACAGGTTTTGGACGTACTCCTCCAGCTTGCTGTAGTTGGAGCTTTTGCACACCGAGATGAATTCCTCCAGATAGCGTTCCGGCACCACGCCGGACATCTCCAGTATGTCCTGCCTTTCGATGCGCGCCTGGGCACCTTTCAGCCGGTGGCAAGATTGCAGCGTGGTAATCGCTCGCCGCAAATCGCCGCCGGAAATGTCCACAATGTCCTTG TAAACGCCATCGTCCACAGTAACGCCCTCCTGGTCGCAGATGTAACGCAGCCGCTCGATGATCTTCTCCTCCCCCAGCGGCTTGAAACGAAACTTG GTACAGCGCGATGTGATCGGTTCGATAATGCGCGACACGTAGTTGCACACCAGACAGAACCGTGTCGTTTTCGTTTCCTTCTCCATCGTGCGGCGCAGGGCGGCCTGCGCTGCGTGCGTCATCGCGTCGGCCTCATCCAGGATGACGATTTTGAACGGTGGACAGGGCTTAC CGTCCGT CCGCGTACCGCTCGCCGTTAGCTGGGCGAACGTTTTCACCTTGTTGCGAATGA CCGCAATG CCACGGTCGTCCGACGCATTCAGCTCGAGAATGCGCTCCTTGAACATGTCGCCGAACAGCTGTCTCGCCG CCGCCAGGATTGTGCTGGTTTTACCGGTGCCGGGTGGTCCGTACAGCAGCAGATTCGGCAGATCGGTAGTGGAAAGGCTTTCGCGTAACACGGCAA ] [+] EMBL CNS09PK1 [ TGACGCGGCCGTGGTTCACTGATCTTTGAGAGCCTGAATGGTAACGCACCCT AAATCCATGATTTGAATATATTCCGACCCTCCGCCATGTAATCGGAAGCAACATTCACCAAGCTTGTCACAGATCACTGCCTTTTGCTTTTCCGTAAGACCGTCATTGTACACGATGTACTCCGTCAGCTGCTCAAACAGCTGGCCCACGCTGTACGCATCGTACGACAGGTTTTGGACGTACTCCTCCAGCTTGCTGTAGTTGGAGCTTTTGCACACCGAGATGAATTCCTCCAGATAGCGTTCCGGCACCACGCCGGACATCTCCAGTATGTCCTGCCTTTCGATGCGCGCCTGGGCACCTTTCAGCCGGTGGCAAGATTGCAGCGTGGTAATCGCTCGCCGCAAATCGCCGCCGGAAATGTCCACAATGTCCTTGTTAAACGCCATCG ] [-] EMBL BM586439 [ ATCTTTGAGGCCCTGAATGGTAACGCACCCTAAAATCCATGATTTGAATATATTCCGACCCTCCGCCATGTAATCGGAAACAACATTCACCAAGCTTGTCACAGATCACTGCCTTTTGCTTTTCCGTAAGACCGTCATTGTACACGATGTATTCCGTTAGCTGTTCAAATAGCTGGCCCACGCTGTACGCATCATACGAAAGGTTTTGGACGTACTCCTCCAGCTTGCTGTAGTTGGAGCTTTTGCACACCGAGATAAATTCCTCCAGATAGCGTTCCGGCACCACGCCGGACATCTCCAGTATGTCCTGCCTTTCGATGCGCGCCTGGGCACCTTTCAGCCGGTGGCAAGATTGCAGCGTGGTAATCGCTCGCCGCAAATCGCCGCCGGAAATGTCCACAATGTCCTTG TAAACGCCATCGTCCACAGTAACGCCCTCCTGGTCGCAGATGTAACGCAGCCGCTCGATGATCTTCTCCTCCCCCAGCGGTTTGAAGCGAAACTTG GTACAGCGCGATGTGATCGGTTCGATAATGCGCGACACGTAGTTGCACACCAGACAGAACCGTGTCGTTTTCGTTTCCTTCTCCATCGTGCGGCGCAGGGCGGCCTGCGCTGCGTGCGTCATCGCGTCGGCCTCATCCAGGATGACGATTTTGAACGGTGGACAGGGCTTAC Ccgg ] [-] EMBL CNS09LNO [ ACATTTTTTGGACGTACTCCTCCAGCTTGCTGTAGTTGGAGCTTTTGCACACCGAGATGAATTCCTCCAGATAGCGTTCCGGCACCACGCCGGACATCTCCAGTATGTCCTGCCTTTCGATGCGCGCCTGGGCACCTTTCAGCCGGTGGCAAGATTGCAGCGTGGTAATCGCTCGCCGCAAATCGCCGCCGGAAATGTCCACAATGTCCTTG TAAACGCCATCGTCCACAGTAACGCCCTCCTGGTCGCAGATGTAACGCAGCCGCTCGATGATCTTCTCCTCCCCCAGCGGCTTGAAACGAAACTTG GTACAGCGCGATGTGATCGGTTCGATAATGCGCGACACGTAGTTGCACACCAGACAGAACCGTGTCGTTTTCGTTTCCTTCTCCATCGTGCGGCGCAGGGCGGCCTGCGCTGCGTGCGTCATCGCGTCGGCCTCATCCAGGATGACGATTTTGAACGGTGGACAGGGCTTAC CGTCCGTCCCGCGTACCGCTCGCCGTTAGCTGGGCGAACGTTTTCACCTTGTTGCGAATGA CCGCAATG CCACGGTCGTCCGACGCATTCAGCTCGAGAATGCGCTCCTTGAACATGTCGCCGAACAGCTGTCTCGCCG CCGCCAGGATTGTGCTGGTTTTACCGGTGCCGGGTGGTCCGTACAGCAGCAGATTCGGCAGATCGGTAGTGGAAAGGCTTTCGCGTAACACGGCAACCACTTCCGCTTGTTCCACCACATCGTCGACGCTTTTCGGCCGGTATTTTTCGACCCATGGTACGCTGTGCTTTGGTCGCTTGGTTGCTGTTGTTGTGCCG TATCGCCGCCGGGGCCGGCTGCCGAGCTCTCGCCCGTTGTG ] [-] EMBL CNS09EVX [ TCCAGCTTGCTGTAGTTGGAGCTTTTGCACACCGAGATGAATTCCTCCAGATAGCGTTCCGGCACCACGCCGGACATCTCCAGTATGTCCTGCCTTTCGATGCGCGCCTGGGCACCTTTCAGCCGGTGGCAAGATTGCAGCGTGGTAATCGCTCGCCGCAAATCGCCGCCGGAAATGTCCACAATGTCCTTG TAAACGCCATCGTCCACAGTAACGCCCTCCTGGTCGCAGATGTAACGCAGCCGCTCGATGATCTTCTCCTCCCCCAGCGGCTTGAAACGAAACTTG GTACAGCGCGATGTGATCGGTTCGATAATGCGCGACACGTAG TGCACACCAGACAGAACCGTGTCGTTTTCGTTTCCTTCTCCATCGTGCGGCGCAGGGCGGCCTGCGCTGCGTGCGTCATCGCGTCGGCCTCATCCAGGATGACGATTTTGAACGGTGGACAGGGCTTAC CGTCCGT ACGCGTACCGCTCGCCGTTAGCTGGGCGAACGTTTTCACCTTGTTGCGAATGA CCGCAATG CCACGGTCGTCCGACGCATTCAGCTCGAGAATGCGCTCCTTGAACATGTCGCCGAACAGCTGTCTCGCCG CCGCCAGGATTGTGCTGGTTTTACCGGTGCCGGGTGGTCCGTACAGCAGCAGATTCGGCAGATCGGTAGTGGAAAGGCTTTCGCGTAACACGGCAACCACTTCCGCTTGTTCCACCACATCGTCGACGCTTTTCGGCCGGTATTTTTCGACCCATGGTACGCTGTGCTTTGGTCGCTTGGTTGCTGTTGTTGTGCCGCTATCGCCGCCGGGGCCGGCTGCCGAGCTCTCGCCCGTTGTGCGACCAGTCTTCAGGAATGCTTGCATC TTTGTGTTGTAAGAATGAACCAGGAAAAACGAGGTTTAACAAAATTAAAACAAAAAATGA GAATAATGTACACACGACTTGA ] [+] EMBL CNS09E7X [ CCACGCCGGACATCTCCAGTATTTCCTGCCTTTCGATGCGCGCCTGGGCACCTTTCAGCCGGTGGCAAGATTGCAGCGTGGTAATCGCTCGCCGCAAATCGCCACCGGAAATGTCCACAATGTCCTTG TAAACGCCATCGTCCACAGTAACGCCCTCCTGGTCGCAGATGTAACGCAGCCGCTCGATGATTTTCTCCTCCCCCAGCGGTTTGAAGCGAAACTTG GTACAGCGCGATGTGATCGGTTCGATAATGCGCGACACGTAGTTGCACACCAGACAGAACCGTGTCGTTTTCGTTTCCTTCTCCATCGTGCGGGGCAGGG ] [-] EMBL CNS09E7W [ GTATGTCCTGCCTTTCGATGCGCGCCTGGGCACCTTTCAGCCGGTGGCAAGATTGCAGCGTGGTAATCGCTCGCCGCAAATCGCCACCGGAAATGTCCACAATGTCCTTG TAAACGCCATCGTCCACAGTAACGCCCTCCTGGTCGCAGATGTAACGCAGCCGCTCGATGATCTTCTCCTCCCCCAGCGGTTTGAAGCGAAACTTG GTACAGCGCGATGTGATCGGTTCGATAATGCGCGACACGTAG TGCACACCAGACAGAACCGTGTCGTTTTCGTTTCCTTCTCCATCGTGCGGCGCAGGGCGGCCTGCGCTGCGTGCGTCATCGCGTCGGCCTCATCCAGGATGACGATTTTGAACGGTGGACAGGGCTTAC CGTCCGT CCGCGTACCGCTCGCCGTTAGCTGGGCGAACGTTTTCACCTTGTTGCGAATGA CCGCAATG CCACGGTCGTCCGACGCATTCAGCTCGAGAATGCGCTCCTTGAACATGTCGCCGAACAGCTGTCTCGCCG CCGCCAGGATTGTGCTGGTTTTACCGGTGCCGGGTGGTCCGTACAGCAGCAGATTCGGCAGATCGGTAGTGGAAAGGCTTTCGCGTAACACGGCAACCACTTCCGCTTGTTCCACCACATCGTCGACGCTTTTCGGCCGGTATTTTTCGACCCATGGTACGCTGTGCTTTGGTCGCTTGGTTGCTGTTGTTGTGCCGCTATCGCCGCCGGGGCCGGCTGCCGAGCTCTCGCCCGTTGTG ] [-] EMBL BM599036 [ TTTTCGTTTCCTTCTCCATCGTGCGGCGCAGGGCGGCCTGCGCTGCGTGCGTCATCGCGTCGGCCTCATCCAGGATGACGATTTTGAACGGTGGACAGGGCTTAC CGTCCGT CCGCGTACCGCTCGCCGTCAGCTGGGCGAACGTTTTCACCTTGTTGCGAATGA CCGCAATG CCACGGTCGTCCGACGCATTCAGCTCGAGAATGCGCTCCTTGAACATGTCGCCGAACAGCTGTCTCGCCG CCGCCAGGATTGTGCTGGTTTTACCGGTGCCGGGTGGTCCATACAGCAGCAGATTCGGCAGATCGGTAGTGGAAAGGCTTTCGCGTAACACGGCAACCACTTCCGCTTGTTCCACCACATCGTCGACGCTTTTCGGCCGGTATTTTTCGACCCATGGTACGCTGTGCTTTGGTCGCTTGGTTGCTGTTGTTGTGCCGCTATCGCCGCCGGGGCCGGCTGCCGAGCTCTCGCCCGTTGTGCGACCAGTTTTCAGGAATGCTTGCATC GTTGTGTTGTGAGAATGGACCGGGAAATACGAGGTTTAACAAAATTAAGACAAAAAATGA GAATAATGTACACACGACTTGAGTTTGTTCGGA CGCGTGGGCGG ] [-] EMBL CNS09GA5 [ GCCTGCGCTGCGTGCGTCATCGCGTCGGCCTCATCCAGGATGACGATTTTGAACGGTGGACAGGGCTTACACGTCCGT CCCCGTACCGCTCGCCGTTAGCTGGGCGAACGTTTTCACCTTGTTGCGAATGACCCGCAATG CCACGGTCGTCCGACGCATTCAGCTCGAGAATGCGCTCCTTGAACATGTCGCCGAACAGCTGTCTCGCCGCCCGCCAGGATTGTGCTGGTTTTACCGGTGCCGGGTGGTCCGTACAGCAGCAGATTCGGCAGATCGGTAGTGGAAAGGCTTTCGCGTAACACGGCAACCACTTCCGCTTGTTCCACCACATCGTCGACGCTTTTCGGCCGGTATTTTTCGACCCATGGTACGCTGTGCTTTGGTCGCTTGGTTGCTGTTGTTGTGCCGCTATCGCCGCCGGGGCCGGCTGCCGAGCTCTCGCCCGTTGTG ] [-] EMBL BX602713 [ TCATCGCGTCGGCCTCATCCAGGATGACGATTTTGAACGGTGGACAGGGCTTAC CGTCCGT CCGCGTACCGCTCGCCGTTAGCTGGGCGAACGTTTTCACCTTGTTGCGAATGA CCGCAATG CCACGGTCGTCCGACGCATTCAGCTCGAGAATGCGCTCCTTGAACATGTCGCCGAACAGCTGTCTCGCCG CCGCCAGGATTGTGCTGGTTTTACCGGTGCCGGGTGGTCCGTACAGCAGCAGATTCGGCAGATCGGTAGTGGAAAGGCTTTCGCGTAACACGGCAACCACTTCCGCTTGTTCCACCACATCGTCGACGCTTTTCGGCCGGTATTTTTCGACCCATGGTACGCTGTGCTTTGGTCGCTTGGTTGCTGTTGTTGTGCCGCTATCGCCGCCGGGGCCGGCTGCCGAGCTCTCGCCCGTTGTGCGACCAGTTTTCAGGAATGCTTGCATC TTTGTGTTGTAAGAATGAACCAGGAAAAACGAGGTTTAACAAAATTAAGACAAAAAATGA GAATAATGTACACACGACTTGAGTTTGTTTGCA A ] [-] EMBL BM593100 [ CGGTGGACAGGGCTTAC CGTCCGT CCGCGTACCGCTCGCCGTTAGCTGGGCGAACGTTTTCACCTTGTTGCGAATGA CCGCAATGCCCACGGTCGTCCGACGCATTCAGCTCGAGAATGCGCTCCTTGAACATGTCGCCGAACAGCTGTCTCGCCG CCGCCAGGATTGTGCTGGTTTTACCGGTGCCGGGTGGTCCGTACAGCAGCAGATTCGGCAGATCGGTAGTGGAAAGGCTTTCGCGTAACACGGCAACCACTTCCGCTTGTTCCACCACATCGTCGACGCTTTTCGGCCGGTATTTTTCGACCCATGGTACGCTGTGCTTTGGTCGCTTGGTTGCTGTTGTTGTGCCGCTATCGCCGCCGGGGCCGGCTGCCGAGCTCTCGCCCGTTGTGCGACCAGTTTTCAGGAATGCTTGCATC TTTGTGTTGTAAGAATGAACCAGGAAAAACGAGGTTTAACAAAATTAAGACAAAAAATGA GAATAATGTACACACGACTTGAGTTTGTTTGCA ACAGCGCGCGG ] [-] EMBL CNS09PK0 [ TCCGACGCATTCAGCTCGAGAATGCGCTCCTTGAACATGTGGCGGGACGGCTGTCTCGCCG CCGCCAGGATTGTGCTGGTTTTACCGGTGCCGGGTGGTCCGTACAGCAGCAGATTCGGCAGATCGGTAGTGGAAAGGCTTTCGCGTAACACGGCAACCACTTCCGCTTGTTCCACCACATCGTCGACGCTTTTCGGCCGGTATTTTTCGACCCATGGTACGCTGTGCTTTGGTCGCTTGGTTGCTGTTGTTGTGCCG TATCGCCGCCGGGGCCGGCTGCCGAGCTCTCGCCCGTTGTG ] [-] EMBL BX602333 [ GTCGCTTGGTTGCTGTTGTTGTGCCGCTTTCGCCGCCGGGGCCGGCTGCCGAGCTCTCGCCCGTTGTGCGACCGGTTTTCAGGATTGCTTGCTTC TTTGTGTTGTAAGAAT ] [-] EMBL BX469362 [ CGCCCGTGGTGCGACCAGTTTT AGGAATGCTTGCATCNTTTGTGTTGTAAGAATGAACCAGG AAAACGAGGTTTAACAAAATTAAGACAAAAAATGAGGAATAATGTACACACGAC TGAG TTG TTGCACAGCtnatctctgcatctggctnaggaatt] consensusID : consensus_9708#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 632 fasta sequence [CAGAACCGTGTCGTTTTCGTTTCCTTCTCCATCGTGCGGCGCAGGGCGGC-CTGCGCTG-CGTG-CGTCATCGCGTCGGCC-TCAT-CCAGGAT-G-ACGATTTTGAACGGTGGACAGGGCTTACCGTCCGT-CCGCGTCCCGCTCGCCGTCAG-CTGG-GCGAACGTTTTCACCTTGTTGCGAATGACCGCAATGCCACGGTCGTCCGACGCATTCAGCTCGAGAATGCGCTCCTTGAACATGTCACCGAACAGCTGTCTCGCCGCCGCCAGGATTGTGCTGGTTTTACCGGTGCCGGGTGGTCCGTACAGCAGCAGATTCGGCAGATCGGTGGTGGAAAGGCTTTCGCGTAACACGGCAACTACTTCCGCTTGTTCCACCACATCGTCGACGCTTTTCGGCCGATATTTTTCGACCCATGGTACGCTGTGCTTTGGTCGCTTGGTTGCTGTTGTTGTGCCGCTATCGCCGCCAGGGCCGGCTGCCGAGCTCTCGCCCGTTGTGCGACCAGTTTTCAGGAATGCTTGCATCTTTGTGTTGTAAGAATGGACCGGGGAACACGAGGTTTAACAAAATTAAGACAAAAAAATGAGAATAATGTACACACGACTTGAGTTTGTTTGCAACAGCACGA-TCTGCGG] [-] EMBL BM591726 [CAGAACCGTGTCGTTTTCGTTTCCTTCTCCATCGTGCGGCGCAGGGCGGC CTGCGCTG CGTG CGTCATCGCGTCGGCC TCAT CCAGGAT G ACGATTTTGAACGGTGGACAGGGCTTACCGTCCGT CCGCGTCCCGCTCGCCGTCAG CTGG GCGAACGTTTTCACCTTGTTGCGAATGACCGCAATGCCACGGTCGTCCGACGCATTCAGCTCGAGAATGCGCTCCTTGAACATGTCACCGAACAGCTGTCTCGCCGCCGCCAGGATTGTGCTGGTTTTACCGGTGCCGGGTGGTCCGTACAGCAGCAGATTCGGCAGATCGGTGGTGGAAAGGCTTTCGCGTAACACGGCAACTACTTCCGCTTGTTCCACCACATCGTCGACGCTTTTCGGCCGATATTTTTCGACCCATGGTACGCTGTGCTTTGGTCGCTTGGTTGCTGTTGTTGTGCCGCTATCGCCGCCAGGGCCGGCTGCCGAGCTCTCGCCCGTTGTGCGACCAGTTTTCAGGAATGCTTGCATCTTTGTGTTGTAAGAATGGACCGGGGAACACGAGGTTTAACAAAATTAAGACAAAAAAATGAGAATAATGTACACACGACTTGAGTTTGTTTGCAACAGCACGA TCTGCGG] [-] EMBL BX469792 [ cCGGCTCTGCGCTGCCGTGCCGTCATCGCGTCGGCCTTCATCCCAGGATNGCACGATTTTGAACGGTGGACAGGGCTTACCGTCCGTCCCGCGTCCCGCTCGCCGTCAGNCTGGCGCGAACGTTTTCACCTTGTTGCGAATGACCGCAATGCCACGGTCGTCCGACGCATTCAGCTCGAGAATGCGCTCCTTGAACATGTCACCGAACAGCTGTCTCGCCGCCGCCAGGATTGTGCTGGTTTTACCGGTGCCGGGTGGTCCGTACAGCAGCAGATTCGGCAGATCGGTGGTGGAAAGGCTTTCGCGTAACACGGCAACTACTTCCGCTTGTTCCACCACATCGTCGACGCTTTTCGGCCGATATTTTTCGACCCATGGTACGCTGTGCTTTGGTCGCTTGGTTGCTGTTGTTGTGCCGCTATCGCCGCCAGGGCCGGCTGCCGAGCTCTCGCCCGTTGTGCGACCAGTTTTCAGGAATGCTTGCATCTTTGTGTTGTAAGAATGGACCGGGGAACACGAGGTTTAACAAAATTAAGACAAAAAAATGAGAATAATGTACACACGACTTGAG TTG TCCACGTGC CGATTCTGCc ] consensusID : consensus_9708#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 100 fasta sequence [GTGTTAGTAAAACTTTATTACTCTCTCTTGCAGGAATGTTGCTTCCGATTACATGGGGGAGGGTCGGAATATATTCAAATCATGGATTTAGGGGGCGTTA] [+] EMBL CNS08V7J [GTGTTAGTAAAACTTTATTACTCTCTCTTGCAGGAATGTTGCTTCCGATTACATGGGGGAGGGTCGGAATATATTCAAATCATGGATTTAGGGGGCGTTA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9708#0 TTTTTGAGGTAAAAAGAGTATTGATTGTTTATTGACGCGGCCGTGGTTCACTGATCTTTG 60 consensus_9708#1 ------------------------------------------------------------ consensus_9708#2 ------------------------------------------------------------ consensus_9708#0 AGAGCCTGAATGGTAACGCACCCTAAATCCATGATTTGAATATATTCCGACCCTCCGCCA 120 consensus_9708#1 ------------------------------------------------------------ consensus_9708#2 ------------------------------------------------------------ consensus_9708#0 TGTAATCGGAAGCAACATTCACCAAGCTTGTCACAGATCACTGCCTTTTGCTTTTCCGTA 180 consensus_9708#1 ------------------------------------------------------------ consensus_9708#2 ------------------------------------------------------------ consensus_9708#0 AGACCGTCATTGTACACGATGTACTCCGTCAGCTGCTCAAACAGCTGGCCCACGCTGTAC 240 consensus_9708#1 ------------------------------------------------------------ consensus_9708#2 ------------------------------------------------------------ consensus_9708#0 GCATCGTACGACAGGTTTTGGACGTACTCCTCCAGCTTGCTGTAGTTGGAGCTTTTGCAC 300 consensus_9708#1 ------------------------------------------------------------ consensus_9708#2 ------------------------------------------------------------ consensus_9708#0 ACCGAGATGAATTCCTCCAGATAGCGTTCCGGCACCACGCCGGACATCTCCAGTATGTCC 360 consensus_9708#1 ------------------------------------------------------------ consensus_9708#2 ------------------------------------------------------------ consensus_9708#0 TGCCTTTCGATGCGCGCCTGGGCACCTTTCAGCCGGTGGCAAGATTGCAGCGTGGTAATC 420 consensus_9708#1 ------------------------------------------------------------ consensus_9708#2 ------------------------------------------------------------ consensus_9708#0 GCTCGCCGCAAATCGCCGCCGGAAATGTCCACAATGTCCTTGTAAACGCCATCGTCCACA 480 consensus_9708#1 ------------------------------------------------------------ consensus_9708#2 ------------------------------------------------------------ consensus_9708#0 GTAACGCCCTCCTGGTCGCAGATGTAACGCAGCCGCTCGATGATCTTCTCCTCCCCCAGC 540 consensus_9708#1 ------------------------------------------------------------ consensus_9708#2 ------------------------------------------------------------ consensus_9708#0 GGCTTGAAACGAAACTTGGTACAGCGCGATGTGATCGGTTCGATAATGCGCGACACGTAG 600 consensus_9708#1 ------------------------------------------------------------ consensus_9708#2 ------------------------------------------------------------ consensus_9708#0 TTGCACACCAGACAGAACCGTGTCGTTTTCGTTTCCTT-CTCCATCGTGCGGCGCAGGGC 659 consensus_9708#1 ------------CAGAACCGTGTCGTTTTCGTTTCCTT-CTCCATCGTGCGGCGCAGGGC 47 consensus_9708#2 -------------------GTGTTAGTAAAACTTTATTACTCTCTCTTGCAG-GAATGTT 40 **** * ** ** *** ** *** * * * * consensus_9708#0 GGCCTGCGCTGCGTGCGTCATCGCGTCGGCCTCATCCAGGATGACGATTTTGAACGGTGG 719 consensus_9708#1 GGCCTGCGCTGCGTGCGTCATCGCGTCGGCCTCATCCAGGATGACGATTTTGAACGGTGG 107 consensus_9708#2 GCTTCCGATTACATGGGGGA--GGGTCGGAATATATTCAAATCATGGATTTAGGGGGCGT 98 * * * ** * * * ***** * ** * * *** ** * consensus_9708#0 ACAGGGCTTACCGTCCGTCCGCGTACCGCTCGCCGTTAGCTGGGCGAACGTTTTCACCTT 779 consensus_9708#1 ACAGGGCTTACCGTCCGTCCGCGTCCCGCTCGCCGTCAGCTGGGCGAACGTTTTCACCTT 167 consensus_9708#2 TA---------------------------------------------------------- 100 consensus_9708#0 GTTGCGAATGACCGCAATGCCACGGTCGTCCGACGCATTCAGCTCGAGAATGCGCTCCTT 839 consensus_9708#1 GTTGCGAATGACCGCAATGCCACGGTCGTCCGACGCATTCAGCTCGAGAATGCGCTCCTT 227 consensus_9708#2 ------------------------------------------------------------ consensus_9708#0 GAACATGTCGCCGAACAGCTGTCTCGCCGCCGCCAGGATTGTGCTGGTTTTACCGGTGCC 899 consensus_9708#1 GAACATGTCACCGAACAGCTGTCTCGCCGCCGCCAGGATTGTGCTGGTTTTACCGGTGCC 287 consensus_9708#2 ------------------------------------------------------------ consensus_9708#0 GGGTGGTCCGTACAGCAGCAGATTCGGCAGATCGGTAGTGGAAAGGCTTTCGCGTAACAC 959 consensus_9708#1 GGGTGGTCCGTACAGCAGCAGATTCGGCAGATCGGTGGTGGAAAGGCTTTCGCGTAACAC 347 consensus_9708#2 ------------------------------------------------------------ consensus_9708#0 GGCAACCACTTCCGCTTGTTCCACCACATCGTCGACGCTTTTCGGCCGGTATTTTTCGAC 1019 consensus_9708#1 GGCAACTACTTCCGCTTGTTCCACCACATCGTCGACGCTTTTCGGCCGATATTTTTCGAC 407 consensus_9708#2 ------------------------------------------------------------ consensus_9708#0 CCATGGTACGCTGTGCTTTGGTCGCTTGGTTGCTGTTGTTGTGCCGCTATCGCCGCCGGG 1079 consensus_9708#1 CCATGGTACGCTGTGCTTTGGTCGCTTGGTTGCTGTTGTTGTGCCGCTATCGCCGCCAGG 467 consensus_9708#2 ------------------------------------------------------------ consensus_9708#0 GCCGGCTGCCGAGCTCTCGCCCGTTGTGCGACCAGTTTTCAGGAATGCTTGCATCTTTGT 1139 consensus_9708#1 GCCGGCTGCCGAGCTCTCGCCCGTTGTGCGACCAGTTTTCAGGAATGCTTGCATCTTTGT 527 consensus_9708#2 ------------------------------------------------------------ consensus_9708#0 GTTGTAAGAATGAACCAGGAAAAACGAGGTTTAACAAAATTAAGACAAAAAA-TGAGAAT 1198 consensus_9708#1 GTTGTAAGAATGGACCGGGGAACACGAGGTTTAACAAAATTAAGACAAAAAAATGAGAAT 587 consensus_9708#2 ------------------------------------------------------------ consensus_9708#0 AATGTACACACGACTTGAGTTTGTTTGCAAGCGCGGGCGGGCATCTGGCTNAGGAATT 1256 consensus_9708#1 AATGTACACACGACTTGAGTTTGTTTGCAACAGCA--CGATCTGCGG----------- 632 consensus_9708#2 ---------------------------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||