These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9716#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 19 consensus length = 1416 fasta sequence [CTGGATTGTTTACATTGGAGGAAATCAATCTATTTACAGCTCTTCGGGACCGCTCACGAAAAATACTGAAAAAGCGT-AGCAG-TTGATCCAAAAATGGTCTTTAAATGCCAGGAGGATAGTTTTCTGAAGGAATTTCAAACAAAGGTAGTGTCTTGCGAAAAAGTTTTAGGCGGCTTCAACGTAATATTTGAAGACACCATCCTATTCCCCGAGGGAGGCGGACAACCTACCGACCACGGAACGGTTGGTGGCCGGGCGGTAAAATCGGTTGTCCGAAAGGGTTCCGAG-GCCATCCACTTCCTA-GAAGACGATGGCAACGGCAACCAACCTTTCGCAGCGGGAGAGCAAGTCGTCCAATGCGTTGACTGGAACCGCCGGTTCGACCACATGCAACAACACTCTGGCCAGCATC--TCATAACGGCGATATTTGATCGCGAGTTCAAGTACAACACGAAATCCTGGTGGCTGGGTACGGAAAGCTCGTACATAGATCTCGAAGCGAAGGACGTAACTCGC-GA-GCAGCTGGAAAGGGTGGAAAGCATCTGCAACCAGCTGATCGTCGATTGCACTCCCGTCAGGGTG-GACGTATACGAACCGGACGATCCGGCACTCAAGTCCGATGTTACGCGAGCAACTCGTGGCCTTCCGGAGGATGTGTCTGGTCCGTTGCGCGTAGTAACGATCGCGGGCATCGAAAGCAACATGTGCTGCGGAACGCAC-GTCCGTAATCTAGGCCAGCTGCAATCCGTCAAGCTGCTTAGCGTGGAGAAAGCGAAGGGTAAGTGTCTGGTACACTTCCTGGTGGGTGGCCGTGTGCTGCGAAAGCTGTCCGAATGCTACGACCGGGAGGTTCAACTCAATACCCTCCTAAACGGTGGACCATCTTCACACATCGATCTGGCAAAGAAGCTGCAATCGACCGTACGGGCCACCCAGCGTATTGCCAAGAAGTTAACCACCGAGCTGGCCACTGCCGAGGCGGAAAAGTTAAACCAACAGCGGGACAGC-GGCAGTGCTCCGAAGTATGTTTCGCTTCACAGAGGCGACGGTCAAGATTCTGATTTCATCAACACCTTTCTGCGGATGGTGAAGCT-GCCGGATTGCTTCATCTTCCTCACGAACGCGGACACTAATGGGAGCGGCAAAGGGCAGCTCGTTCTGCA-GGGCCGCCCGGACGATGTGGCCAAGCTGGGACCGGAGATATGCACGTTGCTGGAAGGCAAAGGCAACGGAAAAGGTACGCGCTACAACGCGAAGGTGAATAAGTTGAAGAATTTGCCACAGTGC-GAAAAGCTAGTCCAAGAATACTTTTCTTCCTGTGATGGTGGCACTACTGCTGCCGTCGTTGAGAAGTAAAA----AACGAAATAAAGCATTGCTTTGAGTGATACGTTCGTGATGTTTTA------AAAAAAAAAAAAA] [+] EMBL CNS09HYR [CTGGATTGTTTACATTGGAGGAAATCAATCTATTTACAGCTCTTCGGGACCGCTCACGAAAAATACTGAAAAAGCGT AGAAGTTTGATCCAAAAATGGTCTTTAAATGCCAGGAGGATAGTTTTCTGAAGGAATTTCAAACAAAGGTAGTGTCTTGCGAAAAAGTTTTAGGCGGCTTCAACGTAATATTTGAAGACACCGTCCTATTCCCCGAGGGAGGCGGACAACCTACCGACCACGGAACGGTTGGCGGCCGGGCGGTAAAATCGGTTGTCCGAAAGGGTTCCGAG GCCATCCACTTCCTA GAAGACGATGGCAACGGCAACCAACCTTTCGCAGCGGGAGAGCAAGTCGTCCAATGCGTTGACTGGAACCGCCGGTTCGACCACATGCAACAACACTCTGGCCAGCATC TCATAACGGCGATATTTGATCGCGAGTTCAAGTACAACACGAAATCCTGGTGGCTGGGTACGGAAAGCTCGTACATAGATCTCGAAGCGAAGGACGTAACTCGC GA GCAGCTGGAAAGGGTGGAAAGCATCTGCAACCAGCTGATCGTCGATTGCACTCCCGTCAGGGTGAGACGTATACGAACCGGACGATCCGGCACTCAAGTCCGATGTTACGCGAGCAACTCGTGGCCTTCCGGAGGATGTGTCTGGTCCGTTGCGCGTAGTAACGATCGCGGGCATCGAAAGCAACATGTGCTGCGGAAC CAC GTCCGTAATCTAGGCCAGCCGCAATCCGTCAAGCTGCTTAGCGTGGAGAAAGCGAAGGGTAAGTGTCTGGTACACTTCCTGGTGGGTGGCCGTGTGCTGCGAAA CTGTCCGAATGCTACGACCGGGAGGTTCAACTCAATACCCTCCTAAACGGTGGACCATCTTCACACATCGATCTGGCAAAGAAGCTGCAATCGACCGTACGGGCCACCCAGCGTATTGCCAAGAAGTTAACCACCGAGCTGGCCACTGCCGAGGCGGAAAA ] [+] EMBL CNS09685 [ TTGGAGGAAATCAATCTATTTACAGCTCTTCGGGACCGCTCACGAAAAATACTGAAAAAGCGT CAGTTTGATCCAAAAATGGTCTTTAAATGCCAGGAGGATAGTTTTCTGAAGGAATTTCAAACAAAGGTAGTGTCTTGCGAAAAAGTTTTAGGCGGCTTCAACGTAATATTTGAAGACACCATCCTATTCCCCGAGGGAGGCGGACAACCTACCGACCACGGAACGGTTGGTGGCCGGGCGGTAAAATCGGTTGTCCGAAAGGGTTCCGAG GCCATCCACTTCCTA GAAGACGATGGCAACGGCAACCAACCTTTCGCAGCGGGAGAGCAAGTCGTCCAATGCGTTGACTGGAACCGCCGGTTCGACCACATGCAACAACACTCTGGCCAGCATC TCATAACGGCGATATTTGATCGCGAGTTCAAGTACAACACGAAATCCTGGTGGCTGGGTACGGAAAGCTCGTACATAGATCTCGAAGCGAAGGACGTAACTCGCGGAGGCAGCTGGAAAGGGTGGAAAGCATCTGCAACCAGCTGATCGTCGATTGCACTCCCGTCAGGTGG GACGTATACGAACCGGACGATCCGGCACTCAAGTCCGATGTTACGCGAGCAACTCGTGGCCTTCCGGAGGATGTGTCTGGTCCGTTGCGCGTAGTAACGATCGCGGGCATCGAAAGCAACATGTGCTGCGGAAC CACGGTCCGTAATCTAGGCCAGCTGCAATCCGTCAAGCTGCTTAGCGTGGAGAAAGCGAAGGGTAAGTGTCTGGTACACTTCCTGGTGGGTGGCCGTGTGCTGCGAAA CTGTCCGAATGCTACGACCGGGAGGTTCAACTCAATACCCTCCTAAACGGTGGACCATCTTCACACATCGATCTGGCAAAGAAACTGCAATCGACCGTACGGGCCACCCAGCGTATTGCCAAGAAGTTAACCACCGAGCTG ] [+] EMBL BM605345 [ ccgaaaAAATCAATCTATTTACAGCTCTTCGGGACCGCTCACGAAAAATACCGAAAAAGCGT AGCAG TTGATCCAAAAATGGTCTTTAAATGCCAGGAGGATAGTTTTCTGAAGGAATTTCAAACAAAGGTAGTGTCTTGCGAAAAAGTTGCAGGCGGCTTCAATGTAATATTTGAAGACACCATCCTATTCCCCGAGGGAGGCGGACAACCTACCGACCACGGAACGGTTGGTGGCCGGGCGGTAAAATCGGTTGTCCGAAAGGGTTCCGAG GCCATCCACTTCCTA GAAGACGATGGCAAAGGCAGCCAACCTTTCGCAGCGGGAGAGCAAGTCGTTCAATGCGTTGACTGGAACCGCCGGTTCGACCACATGCAGCAACACTCTGGCCAGCATC TCATAACGGCGATATTTGATCGCGAGTTCAAGTACAACACGAAATCCTGGTGGCTGGGTACGGAAAGCTCGTACATAGATCTCGAAGCGAAGGACGTAACTCGC GA GCAGCTGGAAAGGGTGGAAAGCATCTGCAACCAGCTGATCGTCGATTGCACc ] [+] EMBL CNS09L9A [ ggAATCAATCTATTTACAGCTCTTCGGGACCGCTCACGAAAAATACTGAAAAAGCGTAAGC TTGATCCAAAAATGGTCTTTAAATGCCAGGAGGATAGTTTTCTGAAGGAATTTCAAACAAAGGTAGTGTCTTGCGAAAAAGTTTTAGGCGGCTTCAACGTAATATTTGAAGACACCATCCTATTCCCCGAGGGAGGCGGACAACCTACCGACCACGGAACGGTTGGTGGCCGGGCGGTAAAATCGGTTGTCCGAAAGGGTTCCGAGAGCCATCCACTTCCTA GAAGACGATGGCAACGGCAACCAACCTTTCGCAGCGGGAGAGCAAGTCGTCCAATGCGTTGACTGGAACCGCCGGTTCGACCACATGCAACAACACTCTGGCCAGCATC TCATAACGGCGATATTTGATCGCGAGTTCAAGTACAACACGAAATCCTGGTGGCTGGGTACGGAAAGCTCGTACATAGATCTCGAAGCGAAGGACGTAACTCGC GA GCAGCTGGAAAGGGTGGAAAGCATCTGCAACCAGCT ] [+] EMBL CNS08IWW [ CTCACGAAAAATACTGAAAAAGCGT AAGTT TTGATCCAAAAATGGTCTTTAAATGCCAGGAGGATAGTTTTCTGAAGGAATTTCAAACAAAGGTAGTGTCTTGCGAAAAAGTTTTAGGCGGCTTCAACGTAATATTTGAAGACACCATCCTATTCCCCGAGGGAGGCGGACAACCTACCGACCACGGAACGGTTGGTGGCCGGGCGGTAAAATCGGTTGTCCGAAAGGGTTCCGAG GCCATCCACTTCCTA GAAGACGATGGCAACGGCAACCAACCTTTCGCAGCGGGAGAGTAAGTCGTCCAATGCGTTGACTGGAACCGCCGGTTCGACCACATGCAACAACACTCTGGCCAGCATC TCATAACGGCGATATTTGATCGCGAGTTCAAGTACAACACGAAATCCTGGTGGCTGGGTACGGAAAGCTCGTACATAGATCTCGAAGCGAAGGACGTAACTCGC GA GCAGCTGGAAAGGGTGGAAAGCATCTGCAACCAGCTGATCGTCGATTGCACTCCCGTCA GGTG GACGTATACGAACCGGACGATCCGGCACTCAAGTCCGATGTTACGCGAGCAACTCGTGGCCTTCCGGA GATGTGTCTGGTCCGTTGCGCGTAGTAACGATCGCGGGCATCGAAAGCAACATGTGCTGCGGAAC CAC GTCCGTAATCTAGGCCAGCTGCAATCCGTCAAGCTGCTTAGCGTGGAGAAAGCGAAGGGTAAGTGTCTGGTACACTTCCTGGTGGGTGGCCGTGTGCTGCGAAA CTGTCCGAATGCTACGACCGGGAGGTTCAACTCAATACCCTCCTAAACGGTGGACCATCTTCACACATCGATCTGGCAAAGAAGCTGCAATCGACCGTACGGGCCACCCAGCGTATTGCCAAGAAGTTAACCACCGAGCTGGCCACTGCCGAGGCGGAAAAGTTAAACCAACAGCGGGACAGC GGCAGT ] [+] EMBL BM585154 [ ccgGAAAAATACCGAAAAAGCGT AGCAG TTGATCCAAAAATGGTCTTTAAATGCCAGGAGGATAGTTTTCTGAAGGAATTTCAAACAAAGGTAGTGTCTTGCGAAAAAGTTGCAGGCGGCTTCAATGTAATATTTGAAGACACCATCCTATTCCCCGAGGGAGGCGGACAACCTACCGACCACGGAACGGTTGGTGGCCGGGCGGTAAAATCGGTTGTCCGAAAGGGTTCCGAG GCCATCCACTTCCTA GAAGACGATGGCAAAGGCAGCCAACCTTTCGCAGCGGGAGAGCAAGTCGTTCAATGCGTTGACTGGAACCGCCGGTTCGACCACATGCAGCAACACTCTGGCCAGCATC TCATAACGGCGATATTTGATCGCGAGTTCAAGTACAACACGAAATCCTGGTGGCTGGGTACGGAAAGCTCGTACATAGATCTCGAAGCGAAGGACGTAACTCGC GA GCAGCTGGAAAGGGTGGAAAGCATCTGCAACCAGCTGATCGTCGATTGCACCCCCGTCAGGGTG GACGTATACGAACCGGACGATCCGGCACTCAAGTCCGATGTTACGCGAGCAACTCGTGGCCTTCCGGAGGATGTGTCTGGTCCGTTGCGCGTGGTAACGATCGCGGGCATC ] [+] EMBL CNS08GA0 [ CTGAAAAAGCGT CG AGCTTGATCCAAAAATGGTCTTTAAATGCCAGGAGGATAGTTTTCTGAAGGAATTTCAAACAAAGGTAGTGTCTTGCGAAAAAGTTTTAGGCGGCTTCAACGTAATATTTGAAGACACCATCCTATTCCCCGAGGGAGGCGGACAACCTACCGACCACGGAACGGTTGGTGGCCGGGCGGTAAAATCGGTTGTCCGAAAGGGTTCCGAG GCCATCCACTTCCTA GAAGACGATGGCAACGGCAACCAACCTTTCGCAGCGGGAGAGTAAGTCGTCCAATGCGTTGACTGGAACCGCCGGTTCGACCACATGCAACAACACTCTGGCCAGCATC TCATAACGGCGATATCCGATCGCGAGTTCAAGTACAACACGAAATCCTGGTGGCTGGGTACGGAAAGCTCGTACATAGATCTCGAAGCGAAGGACGTAACTCGC GA GCAGCTGGGAAGGGTGGAAAGCATCTGCAACCAGCTGATCGTCGATTGCACTCCCGTCAGGTGG GACGTATACGAACCGGACGATCCGGCACTCAAGTCCGATGTTACGCGAGCAACTCGTGGCCTTCCGGAGGATGTGTCTGGTCCGTTGCGCGTAGTAACGATCGCGGGCATCGAAAGCAACATGTGCTGCGGAAC CACGGTCCGTAATCTAGGCCAGCTGCAATCCGTCAAGCTGCTTAGCGTGGAGAAAGCGAAGGGTAAGTGTCTGGTACACTTCCTGGTGGGTGGCCGTGTGCTGCGAAA CTGTACGAATGCTACGACCGGGAGGTTCAACTCAATACCCTCCTAAACGGTGGACCATCTTCACAC ] [+] EMBL CNS09BRO [ GGCGGCTTCAACGTAATATTTGAAGACACCATCCTATTCCCCGAGGGAGGCGGACAACCTACCGACCACGGAA GGTTGGTGGCCGGGCGGTAAAATCGGTTGTCCGAAAGGGTTCCGAG GCCATCCACTTCCTA GAAGACGATGGCAACGGCAACCAACCTTTCGCAGCGGGAGAGCAAGTCGTCCAATGCGTTGACTGGAACCGCCGGTTCGACCACATGCAACAACACTATGGCCAGCATC TCATAA ] [+] EMBL BX619682 [ TCGGTTGTCCGAAAGGGTTCCGAG GCCATCCACTTCCTAGGAAGACTATGGCAACGGCAACCAACCTTTCGCAGCGGGAGAGCAAGTCGTCCAATGCGTTGACTGGAACCGCCGGTTCGACCACATGCAGCAACACTCTGGCCAGCATCGTTCATAACGGCTATATTTGATCGCGAGTTCAAGTACAACACGAAATCCTGGTGGCTGGGTACGGAAAGCTCGTACATAGATCTCGAAGCGAAGGACGTAACTCGC GA GCAGCTGGAAAGGGTGGAAAGCATCTGCAACCAGCTGATCGTCGATTGCACTCCCGTCAa ] [+] EMBL BX610349 [ CAGCGGGAGAGCAAGTCGTCCAATGCGTTGACTGGAACCGCCGGTTCGACCACATGCAGCAACACTCTGGCCAGCATC TCATAACGGCTATATTTGATCGCGAGTTCAAGTACAACACGAAATCCTGGTGGCTGGGTACGGAAAGCTCGTACATAGATCTCGAAGCGAAGGACGTAACTCGC GA GCAGCTGGAAAGGGTGGAAAGCATCTGCAACCAGCTGATCGTCGATTGCACTCCCGTCAAGGTG GACGTATACGAACCGGACGATCCGGCACTCAAGTCCGATGTTACGCGAGCAACTCGTGGCCTTCCGGAGGATGTGTCTGGTCCGTTGCGCGTAGTAACGATCGCGGGCATCGAAAGCAACATGTGCTGCGGAACGCAC GTCCGTAATCTAGGCCAGCTGCAATCCGTCAAGCTGCTTAGCGTGGAGAAAGCGAAGGGTAAGTGTCTGGTACATTTCCTGGTGGGTGGCCGTGTGCTGCGAAAGCTGTCCGAATGCTACGACCGGGAGGTTCAACTCAATACCCTCCTAAACGGTGGACCATCTTCACACATCGATCTGGCAAAAAAGCTGCAATCGACCGTACGGGCCACCCAGCGTATTGCCAAGAAGTTAACCACCGAGCTGGCCACTACCGAGGCGGAAAAGTTAAACCAACAGCG ] [-] EMBL CNS08IWX [ GTGGCTGGGTACGGAAAGCTCGTACATAGATCTCGAAGCGAAGGACGTAACTCGC GA GCAGCTGGAAAGGGTGGAAAGCATCTGCAACCAGCTGATCGTCGATTGAACTCCCGTCAGGGTG GACGTATACGAACCGGACGATCCGGAACTCAAGTCCGTTGTTACGCGAGCAACTCGTGGCCTTCCGGAGGATGTGTCTGGTCCGTTGCGCGTAGTAACGATCGCGGGCATCGAAAGCAACATGTGCTGCGGAACGCAC GTCCGTAATCTAGGCCAGCTGCAATCCGTCAAGCTGCTTAGCGTGGAGAAAGCGAAGGGTAAGTGTCTGGTACACTTCCTGGTGGGTGGCCGTGTGCTGCGAAAGCTGTCCGAATGCTACGACCGGGAGGTTCAACTCAATACCCTCCTAAACGGTGGACCATCTTCACACATCGTTCTGGCAAAGAAGCTGCAATCGACCGTACGGGCCACCCAGCGTATTGCCAAGAAGTTAACCACCGAGCTGGCCACTGCCGAGGCGGAAAAGTTAAACCAACAGCGGGACAGC GGCAGTGCTCCGAAGTATGTTTCGCTTCACAGAGGCGACGGTCAAGATTCTGATTTCATCAACACCTTTCTGCGGATGGTGAAGCT GCCGGATTGCTTCATCTTCCTCACGAACGCGGACACTAATGGGAGCGGCAAAGGGCAGCTCGTTCTGCA GGGCCGCCCGGACGATGTGGCCAAGCTGGGACCGGAGATATGCACGTTGCTGGAAGGCAAAGGCAACGGAAAAGGTACGCGCTACAACGCGAAGGTGAATAAGTTGAAGAATTTGCCACAGTGC GAAAAGCTAGTCCAAGAATACTTTTCTTCCTGTGATGGTGGCACTACTGCTGCCGTCGTTGAGAAGTAAAA AACGAAATAAAGCATTGCTT ] [-] EMBL CNS09HYS [ CGTACATAGATCTCGAAGCGAAGGACGTAACTCGC GA GCAGCTGGAAAGGGTGGAAAGCATCTGCAACCAGCTGATCGTCGATTGAACTCCCGTCAGGGTG GACGTATACGAACCGGACGATCCGGAACTCAAGTCCGATGTTACGCGAGCAACTCGTGGCCTTCCGGAGGATGTGTCTGGTCCGTTGCGCGTAGTAACGATCGCGGGCATCGAAAGCAACATGTGCTGCGGAACGCAC GTCCGTAATCTAGGCCAGCCGCAATCCGTCAAGCTGCTTAGCGTGGAGAAAGCGAAGGGTAAGTGTCTGGTACACTTCCTGGTGGGTGGCCGTGTGCTGCGAAAGCTGTCCGAATGCTACGACCGGGAGGTTCAACTCAATACCCTCCTAAACGGTGGACCATCTTCACACATCGATCTGGCAAAGAAGCTGCAATCGACCGTACGGGCCACCCAGCGTATTGCCAAGAAGTTAACCACCGAGCTGGCCACTGCCGAGGCGGAAAAGTTAAACCAACAGCGGGACAGC GGCAGTGCTCCGAAGTATGTTTCGCTTCACAGAGGCGACGGTCAAGATTCTGATTTCATCAACACCTTTCTGCGGATGGTGAAGCT GCCGGATTGCTTCATCTTCCTCACGAACGCGGACACTAATGGGAGCGGCAAAGGGCAGCTCGTTCTGCA GGGCCGCCCGGACGATGTGGCCAAGCTGGGACCGGAGATATGCACGTTGCTGGAAGGCAAAGGCAACGGAAAAGGTACGCGCTACAACGCGAAGGTGAATAAGTTGAAGAATTTGCCACAGTGC GAAAAGCTAGTCCAAGAATACTTTTCTTCCTGTGATGGTGGCACTACTGCTGCCGTCGTTGAGAAGTAAAA AACGAAATAAAGCATTGCTTTGAGTGATACGTTCGTGATGTTTTA AAAAAAAAAAAAA] [-] EMBL CNS09BRP [ CTCAAGTCCGATGTTACGCGAGCAACTCGTGGCCTTCCGGAGGATGTGTCTGGTCCGTTGCGCGTAGTAACGATCGCGGGCATCGAAAGCAACATGTGCTGCGGAACGCAC GTCCGTAATCTAGGCCAGCTGCAATCCGTCAAGCTGCTTAGCGTGGAGAAAGCGAAGGGTAAGTGTCTGGTACACTTCCTGGTGGGTGGCCGTGTGCTGCGAAAGCTGTCCGAATGCTACGACCGGGAGGTTCAACTCAATACCCTCCTAAACGGTGGACCATCTTCACACATCGATCTGGCAAAGAAGCTGCAATCGACCGTACGGGCCACCCAGCGTATTGCCAAGAAGTTAACCACCGAGCTGGCCACTGCCGAGGCGGAAAAGTTAAACCAACAGCGGGACAGCAGGCAGTGCTCCGAAGTATGTTTCGCTTCACAGAGGCGACGGTCAAGATTCTGATTTCATCAGCACCTTTCTGTGGATGGTGAAGCT GCCGGATTGCTTCATCTTCCTCACGAACGCGGACACTAATGGGAGCGGCAAAGGGCAGCTCTTTCTGCATGGGCCGCCCGGACGATGTGGCCAAGCTGGGACCGGAGATATGCACGTTGCTGGAAGGCAAAGGCAACGGAAAAGGTACGCGCTACAACGCGAAGGTGAATAAGTTGAAGAATTTGCCACAGTGCAGAAAAGCTAGTCCAAGAATACTTTTCTTCCTGTGATAGTGCTACTACTGCTGCCCTCG ] [-] EMBL CNS08GA1 [ CGATCGCGGGCATCGAAAGCAACATGTGCTGCGGAACGCAC GTCCGTAATCTAGCCCCGCTGCAATCCGTCAAGCTGCTTAGCGTGGAGAAAGCGAAGGGTAAGTGTCTGGTACACTTCCTGGTGGGTGGCCGTGTGCTGCGAAAGCTGTCCCAATGCTACGACCGGGAGGTTCAACTCAATACCCTCCTAAACGGTGGACCATCTTCACACATCGTTCTGGCAAAGAAGCTGCAATCGACCGTACGGGCCACCCAGCGTATTGCCAAGAAGTTAACCACCGAGCTGGCAACTGCCGAGGCGGAAAAGTTAAACCAACAGGGGAACAGC GGCAGTGCTCCGAAGTATTTTTCGCTTCACAGAGGCGACGGTCAAGATTCTGATTTCATCAACACCTTTCTGCGGATGGTGAAGCTGGCCGGATTGCTTCATCTTCCTCACGAACGCGGACACTAATGGGAGCGGCAAAGGGCAGCTCGTTCTGCA GGGCCGCCCGGACGATGTGGCCAAGCTGGGACCGGAGATATGCACGTTGCTGGAAGGCAAAGGCAACGGAAAAGGTACGCGCTACAACGCGAAGGTGAATAAGTTGAAGAATTTGCCACAGTGC GAAAAGCTAGTCCAAGAATACTTTTCTTCCTGTGATGGTGGCACTACTGCTGCCGTCGTTGAGAAGTAAAA AACGAAATAAAGCATTGCTTTGAa ] [+] EMBL BM603872 [ ccgCGCGGGCATCGAAAGCAACATGTGCTGCGGAACGCAC GTCCGTAATCTAGGCCAGCTGCAATCCGTCAAGCTGCTTAGCGTGGAGAAAGCGAAGGGTAAGTGTCTGGTACACTTCCTGGTGGGTGGCCGTGTGCTGCGAAAGCTGTCCGAATGCTACGACCGGGAGGTTCAACTCAATACCCTCCTAAACGGTGGACCATCTTCACACATCGATCTGGCAAAGAAGCTGCAATCGACCGTTCGGGCCACCCAGCGTATTGCCAAGAAGTTAACCACCGAGCTGGCCACTGCCGAGGCGGAAAAGTTAAACCAACAGCGGGACAGC GGCAGTACTCCGAAGTATGTTTCGCTTCACAGAGGCGACGGTCAAGATTCTGATTTCATCAACACCTTTCTGCGGATGGTGAAGCT GCCGGATTGCTTCATCTTCCTCACGAACGCGGACACGGACGGGAGCGGCAAAGGGCAGCTCGTTCTGCA GGGCCGCCCGGACGATGTGGCCAAGCTGGGACCGGAGATATGCACGTTGCTGGAAGGCAAAGGCAACGGGAAAGGTACGCGCTACAACGCGAAGGTGAATAAGTTGAAGAATTTGCCACAGTGC GAAAAGCTAGTCCAGGAATACTTTTCTTCCTGTGA ] [+] EMBL BX622336 [ CCGTAATCTAGGCCAGCTGCAATCCGTCAAGCTGCTTAGCGTGGAGAAAGCGAAGGGTAAGTGTCTGGTACATTTCCTGGTGGGTGGCCGTGTGCTGCGAAAGCTGTCCGAATGCTACGACCGGGAGGTTCAACTCAATACCCTCCTAAACGGTGGACCATCTTCACACATCGATCTGGCAAAAAAGCTGCAATCGACCGTACGGGCCACCCGGCGTATTGCCAAGAAGTTAACCACCGAGCTGGCCACTACCGAGGCGGAAAAGTTAAACCAACAGCGGGACAGC GGCAGTGCTCCGAAGTATGTTTCGCTTCATAGAGGCGACGGTCAAGATTCTGATTTCATCAACACCTTTCTGCGGATGGTGAAGCT GCCGGATTGCTTCATTTTCCTCACGAACGCGGACACGGATGGAAGCGGCAAAGGGCAGCTCGTTCTGCA GGGCCGCCCGGACGATGTGGCCAAGCTGGGACCGGAGATATGCACATTGCTGGAAGGCAAAGGCAACGGGAAAGGTACGCGCTACAACGCGAAGGTGAATAAGTTGAAGAATTTGCCACAGTGC GAAAAGCTAGTCCAAGAATACTTTTCTTCCTGTGATGGTGGCACTACTGCTGCCGTCGTTGAGAAGTAAAAAAAGAACGAAATAAAGCATTGCTTTTAGTGATACGTTCG ] [-] EMBL CNS09L9B [ CTAAACGGTGGACCATCTTCACACATCGATCTGGCAAAGAAGCTGCAATCGACCGTACGGGCCACCCAGCGTATTGCCAAGAAGTTAACCACCGAGCTGGCCACTGCCGAGGCGGAAAAGTTAAACCAACAGCGGGACAGC GGCAGTGCTCCGAAGTATGTTTCGCTTCACAGAGGCGACGGTCAAGATTCTGATTTCATCAACACCTTTCTGCGGATGGTGAAGCT GCCGGATTGCTTCATCTTCCTCACGAACGCGGACACTAATGGGAGCGGCAAAGGGCAGCTCGTTCTGCA GGGCCGCCCGGACGATGTGGCCAAGCTGGGACCGGAGATATGCACGTTGCTGGAAGGCAAAGGCAACGGAAAAGGTACGCGCTACAACGCGAAGGTGAATAAGTTGAAGAATTTGCCACAGTGC GAAAAGCTAGTCCAAGAATACTTTTCTTCCTGTGATGGTGGCACTACTGCTGCCGTCGTTGAGAAGTAAAA AACGAAATAAAGCATTGCTTTGAGTGATACGTTCGTG ] [-] EMBL CNS09686 [ TAAACCAACAGCGGGACAGC GGCAGTGCTCCGAAGTATGTTTCGCTTCACAGAGGCGACGGTCAAGATTCTGATTTCATCAACACCTTTCTGCGGATGGTGAAGCT GCCGGATTGCTTCATCTTCCTCACGAACGCGGACACTAATGGGAGCGGCAAAGGGCAGCTCGTTCTGCA GGGCCGCCCGGACGATGTGGCCAAGCTGGGACCGGAGATATGCACGTTGCTGGAAGGCAAAGGCAACGGAAAAGGTACGCGCTACAACGCGAAGGTGAATAAGTTGAAGAATTTGCCACAGTGC GAAAAGCTAGTCCAAGAATACTTTTCTTCCTGTGATGGTGGCACTACTGCTGCCGTCGTTGAGAAGTAAAA AACGAAATAAAGCATTGCTTTGAGTGATACGTTCGTGATGTTTTAGTTTCTAAAAAAAAAAAA ] [-] EMBL CNS094M5 [ AAGCTAGTCCAAGAATACTTTTCTTCCTGTGATGGTGGCACTACTGCTGCCGTCGTTGAGAAGTAAAA AACGAAATAAAGCAT ] consensusID : consensus_9716#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 410 fasta sequence [ATCGCCGAGGTTTACAGCTCTTCGGGACGCTCACGAAAAATACGAAAAAGCGTAGCAGTTGATCCAAAAATGGTCTTTAAATGCCAGGAGGATAGTTTTCTGAAGGAATTTCAAACAAAGGTAGTGTCTTGCGAAAAAGTTGCAGGCGGCTTCAATGTAATATTTGAAGACACCATCCTATTCCCCGAGGGAGGCGGACAACCTACCGACCACGGAACGGTTGGTGGCCGGGCGGTAAAATCGGTTGTCCGAAAGGGTTCCGAGGCCATCCACTTCCTAGAAGACGATGGCAAAGGCAGCCAACCTTTCGCAGCGGGAGAGCAAGTCGTTCAATGCGTTGACTGGAACCGCCGGTTCGACCACATGCAGCAACACTCTGGCCAGCATCTCATAACGGCGATATTTGATCG] [+] EMBL AL930097 [ATCGCCGAGGTTTACAGCTCTTCGGGACGCTCACGAAAAATACGAAAAAGCGTAGCAGTTGATCCAAAAATGGTCTTTAAATGCCAGGAGGATAGTTTTCTGAAGGAATTTCAAACAAAGGTAGTGTCTTGCGAAAAAGTTGCAGGCGGCTTCAATGTAATATTTGAAGACACCATCCTATTCCCCGAGGGAGGCGGACAACCTACCGACCACGGAACGGTTGGTGGCCGGGCGGTAAAATCGGTTGTCCGAAAGGGTTCCGAGGCCATCCACTTCCTAGAAGACGATGGCAAAGGCAGCCAACCTTTCGCAGCGGGAGAGCAAGTCGTTCAATGCGTTGACTGGAACCGCCGGTTCGACCACATGCAGCAACACTCTGGCCAGCATCTCATAACGGCGATATTTGATCG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9716#0 CTGGATTGTTTACATTGGAGGAAATCAATCTA-TTTACAGCTCTTCGGGACCGCTCACGA 59 consensus_9716#1 -----------------------ATCGCCGAGGTTTACAGCTCTTCGGGAC-GCTCACGA 36 *** ****************** ******** consensus_9716#0 AAAATACTGAAAAAGCGTAGCAGTTGATCCAAAAATGGTCTTTAAATGCCAGGAGGATAG 119 consensus_9716#1 AAAATAC-GAAAAAGCGTAGCAGTTGATCCAAAAATGGTCTTTAAATGCCAGGAGGATAG 95 ******* **************************************************** consensus_9716#0 TTTTCTGAAGGAATTTCAAACAAAGGTAGTGTCTTGCGAAAAAGTTTTAGGCGGCTTCAA 179 consensus_9716#1 TTTTCTGAAGGAATTTCAAACAAAGGTAGTGTCTTGCGAAAAAGTTGCAGGCGGCTTCAA 155 ********************************************** ************ consensus_9716#0 CGTAATATTTGAAGACACCATCCTATTCCCCGAGGGAGGCGGACAACCTACCGACCACGG 239 consensus_9716#1 TGTAATATTTGAAGACACCATCCTATTCCCCGAGGGAGGCGGACAACCTACCGACCACGG 215 *********************************************************** consensus_9716#0 AACGGTTGGTGGCCGGGCGGTAAAATCGGTTGTCCGAAAGGGTTCCGAGGCCATCCACTT 299 consensus_9716#1 AACGGTTGGTGGCCGGGCGGTAAAATCGGTTGTCCGAAAGGGTTCCGAGGCCATCCACTT 275 ************************************************************ consensus_9716#0 CCTAGAAGACGATGGCAACGGCAACCAACCTTTCGCAGCGGGAGAGCAAGTCGTCCAATG 359 consensus_9716#1 CCTAGAAGACGATGGCAAAGGCAGCCAACCTTTCGCAGCGGGAGAGCAAGTCGTTCAATG 335 ****************** **** ****************************** ***** consensus_9716#0 CGTTGACTGGAACCGCCGGTTCGACCACATGCAACAACACTCTGGCCAGCATCTCATAAC 419 consensus_9716#1 CGTTGACTGGAACCGCCGGTTCGACCACATGCAGCAACACTCTGGCCAGCATCTCATAAC 395 ********************************* ************************** consensus_9716#0 GGCGATATTTGATCGCGAGTTCAAGTACAACACGAAATCCTGGTGGCTGGGTACGGAAAG 479 consensus_9716#1 GGCGATATTTGATCG--------------------------------------------- 410 *************** consensus_9716#0 CTCGTACATAGATCTCGAAGCGAAGGACGTAACTCGCGAGCAGCTGGAAAGGGTGGAAAG 539 consensus_9716#1 ------------------------------------------------------------ consensus_9716#0 CATCTGCAACCAGCTGATCGTCGATTGCACTCCCGTCAGGGTGGACGTATACGAACCGGA 599 consensus_9716#1 ------------------------------------------------------------ consensus_9716#0 CGATCCGGCACTCAAGTCCGATGTTACGCGAGCAACTCGTGGCCTTCCGGAGGATGTGTC 659 consensus_9716#1 ------------------------------------------------------------ consensus_9716#0 TGGTCCGTTGCGCGTAGTAACGATCGCGGGCATCGAAAGCAACATGTGCTGCGGAACGCA 719 consensus_9716#1 ------------------------------------------------------------ consensus_9716#0 CGTCCGTAATCTAGGCCAGCTGCAATCCGTCAAGCTGCTTAGCGTGGAGAAAGCGAAGGG 779 consensus_9716#1 ------------------------------------------------------------ consensus_9716#0 TAAGTGTCTGGTACACTTCCTGGTGGGTGGCCGTGTGCTGCGAAAGCTGTCCGAATGCTA 839 consensus_9716#1 ------------------------------------------------------------ consensus_9716#0 CGACCGGGAGGTTCAACTCAATACCCTCCTAAACGGTGGACCATCTTCACACATCGATCT 899 consensus_9716#1 ------------------------------------------------------------ consensus_9716#0 GGCAAAGAAGCTGCAATCGACCGTACGGGCCACCCAGCGTATTGCCAAGAAGTTAACCAC 959 consensus_9716#1 ------------------------------------------------------------ consensus_9716#0 CGAGCTGGCCACTGCCGAGGCGGAAAAGTTAAACCAACAGCGGGACAGCGGCAGTGCTCC 1019 consensus_9716#1 ------------------------------------------------------------ consensus_9716#0 GAAGTATGTTTCGCTTCACAGAGGCGACGGTCAAGATTCTGATTTCATCAACACCTTTCT 1079 consensus_9716#1 ------------------------------------------------------------ consensus_9716#0 GCGGATGGTGAAGCTGCCGGATTGCTTCATCTTCCTCACGAACGCGGACACTAATGGGAG 1139 consensus_9716#1 ------------------------------------------------------------ consensus_9716#0 CGGCAAAGGGCAGCTCGTTCTGCAGGGCCGCCCGGACGATGTGGCCAAGCTGGGACCGGA 1199 consensus_9716#1 ------------------------------------------------------------ consensus_9716#0 GATATGCACGTTGCTGGAAGGCAAAGGCAACGGAAAAGGTACGCGCTACAACGCGAAGGT 1259 consensus_9716#1 ------------------------------------------------------------ consensus_9716#0 GAATAAGTTGAAGAATTTGCCACAGTGCGAAAAGCTAGTCCAAGAATACTTTTCTTCCTG 1319 consensus_9716#1 ------------------------------------------------------------ consensus_9716#0 TGATGGTGGCACTACTGCTGCCGTCGTTGAGAAGTAAAAAACGAAATAAAGCATTGCTTT 1379 consensus_9716#1 ------------------------------------------------------------ consensus_9716#0 GAGTGATACGTTCGTGATGTTTTAAAAAAAAAAAAAA 1416 consensus_9716#1 ------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||