These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9718#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 16 consensus length = 1318 fasta sequence [CCGCCCACGCGTCCGCCGCGACTGAATCGGTTACAGGCGTATCGTAGCTGCTGGTCGAGCGCGTTTCATTACGCACTCCTCCAAACCTCCGCCACCCTCCCCCACTAGAAACGTTGTGCTCTACGCCGTTGTGTGGTTCGGGGATCAGAGAGAGAGAGTGAGCGAGCGAGCGAGCGCTGGTGCTGGGAACGAGTTTGCTGCTGTTTGCGAGTGTGTGCATGGGTGTGTGAGCGTTCGCGCGCGTGTTTGTGGATAACCGAAAGCGGAAGCGGAAGCGAGAGAGCGAGAGCGGTGCATCGAGAAAGAAGAAGCAGTAGAGGGAGAGAGGAAAAAACAAGTGCTCGTCGTGTACCTTGTGCGGTGCTCGAAGGATCAAAGATCGATTGCCTGCCTGGCCCAGTAATACGGGCGTGTGTGTGGTCGTGTGGCCGTGTGTGAGAGAGTGTGTGTGTGTGAGTGTTTGTGAAGAAAAGCTGCGAACCAGCACAGGTGCGATCGTCGCGCGCGCGTTCGACAGGACTGAACGGACCACTGCCAATTCAGAGTCAGCACAGCATTAGACAGAGTCAGCAG------CAGCAGCAGCCATGGCCGACAAAAAGGTAGCGGAACAGTACTATGCCCCGCCGCCCAAGCTGGGCAAATGGGAAGGATTTAGGACGTTCCTGTGGAACAGCGAAACCAGCCAATGCCTTGGCCGCACCGGATCGAGCTGGGCGAAAATCCTCTTCTTCTACGTGTGCTTTTATGCTGCCCTGGTCGGATTCTTTGCCGCGATGCTGGCCGTGTTCTGGCAGACGCTCGACATGCATATGCCTAAATATCAGCTTGACAGTTCGCTGATTGGATCGAATCCAGGTCTGGGCTTTCGACCAACACCGCCAGAGTACCAGAACGTGGAGAGCTCGTTAATCTGGTACAAAGCTTCCGACAATGGAAACGTTGGGATCTGGACCAAACTAATCGATGAGTTTCTGGAGCCTTACACGGTAGAGGAAGACAACCGCGTCGATTGCTCGTTCGACAATCCGCCGCCGGAGGGCAAGGTTTGCAAAGTTCCTATGACTAACTGGTCTCCGTGCGTCAAGGAAAATCAATACAACTTTAAGAAGAAGAGCCCGTGCATATTCTTGAAGCTGAACAAGATCTACAACTGGGTCCCAGATATGTACAATACCTCGACCAACTTGCCGGAGAAAATGCCCGATGATCTGAAGGAGCACATCCGCGGAGAGGAAGCCCGAGGAAATAAGAACACCAACGTGGTTTGGGTTTCCTGCTCCGGTGAAAACCCTGCCGATAATGAGCACATCGGTGCGAT] [+] EMBL BM654091 [CCGCCCACGCGTCCGCCGCGACTGAATCGGTTACAGGCGTATCGTAGCTGCTGGTCGAGCGCGTTTCATTACGCACTCCTCCAAACCTCCGCCACCCTCCCCCACTAGAAACGTTGTGCTCTACGCCGTTGTGTGGTTCGGGGATCAGAGAGAGAGAGTGAGCGAGCGAGCGAGCGCTGGTGCTGGGAACGAGTTTGCTGCTGTTTGCGAGTGTGTGCATGGGTGTGTGAGCGTTCGCGCGCGTGTTTGTGGATAACCGAAAGCGGAAGCGGAAGCGAGAGAGCGAGAGCGGTGCATCGAGAAAGAAGAAGCAGTAGAGGGAGAGAGGAAAAAACAAGTGCTCGTCGTGTACCTTGTGCGGTGCTCGAAGGATCAAAGATCGATTGCCTGCCTGGCCCAGTAATACGGGCGTGTGTGTGGTCGTGTGGCCGTGTGTGAGAGAGTGTGTGTGTGTGAGTGTTTGTGAAGAAAAGCTGCGAACCAGCACAGGTGCGATCGTCGCGCGCGCGTTCGACAGGACTGAACGGACCACTGCCAATTCAGAGTCAGCACAGCATTAGACAGAGTCAGCAG CAGCAGCAGCCATGGCCGACAAAAAGGTAGCGGAACAGTACTATGCCCCGCCGCCCAAGCTGGGCAAATGGGAAGGATTTAGGACGTTCCTGTGGAACAGCGAAACCAGCCCATGCCTTGGCCGCACCG ] [+] EMBL BM657184 [ CCG CGCGACTGAATCGGTTACAGGCGTATCGTAGCTGCTGGTCGAGCGCGTTTCATTACGCACTCCTCCAAACCTCCGCCACCCTCCCCCACTAGAAACGTTGTGCTCTACGCCGTTGTGTGGTTCGGGGATCAGAGAGAGAGAGTGAGCGAGCGAGCGAGCGCTGGTGCTGGGAACGAGTTTGCTGCTGTTTGCGAGTGTGTGCATGGGTGTGTGAGCGTTCGCGCGCGTGTTTGTGGATAACCGAAAGCGGAAGCGGAAGCGAGAGAGCGAGAGCGGTGCATCGAGAAAGAAGAAGCAGTAGAGGGAGAGAGGAAAAAACAAGTGCTCGTCGTGTACCTTGTGCGGTGCTCGAAGGATCAAAGATCGATTGCCTGCCTGGCCCAGTAATACGGGCGTGTGTGTGGTCGTGTGGCCGTGTGTGAGAGAGTGTGTGTGTGTGAGTGTTTGTGAAGAAAAGCTGCGAACCAGCACAGGTGCGATCGTCGCGCGCGCGTTCGACAGGACTGAACGGACCACTGCCAATTCAGAGTCAGCACAGCATTAGACAGAGTCAGCAG CAGCAGCAGCCATGGCCGACAA ] [+] EMBL BM644496 [ CCGCCGCGACTGAATCGGTTACAGGCGTATCGTATCTGCTGGTCGAGCGCGTTTCATTACGCACTCCTCCAAACCTCCGCCACCCTCCCCCACTAGAAACGTTGTGCTCTACGCCGTTGTGTGGTTCGGGGATCAGAGAGAGAGAGTGAGCGAGCGAGCGAGCGCTGGTGCTGGGAACGAGTTTGCTGCTGTTTGCGAGTGTGTGCATGGGTGTGTGAGCGTTCGCGCGCGTGTTTGTGGATAACCGAAAGCGGAAGCGGAAGCGAGAGAGCGAGAGCGGTGCATCGAGAAAGAAGAAGCAGTAGAGGGAGAGAGGAAAAAACAAGTGCTCGTCGTGTACCTTGTGCGGTGCTCGAAGGATCAAAGATCGATTGCCTGCCTGGCCCAGTAATACGGGCGTGTGTGTGGTCGTGTGGCCGTGT ] [+] EMBL BM654386 [ CCGCGACTGAATCGGTTACAGGCGTATCGTAGCTGCTGGTCGAGCGCGTTTCATTACGCACTCCTCCAAACCTCCGCCACCCTCCCCCACTAGAAACGTTGTGCTCTACGCCGTTGTGTGGTTCGGGGATCAGAGAGAGAGAGTGAGCGAGCGAGCGAGCGCTGGTGCTGGGAACGAGTTTGCTGCTGTTTGCGAGTGTGTGCATGGGTGTGTGAGCGTTCGCGCGCGTGTTTGTGGATAACCGAAAGCGGAAGCGGAAGCGAGAGAGCGAGAGCGGTGCATCGAGAAAGAAGAAGCAGTAGAGGGAGAGAGGAAAAAACAAGTGCTCGTCGTGTACCTTGTGCGGTGCTCGAAGGATCAAAGATCGATTGCCTGCCTGGCCCAGTAATACGGGCGTGTGTGTGGTCGTGTGGCCGTGTGTGAGAGAGTGTGTGTGTGTGAGTGTTTGTGAAGAAAAGCTGCGAACCAGCACAGGTGCGATCGTCGCGCGCGCGTTCGACAGGACTGAACGGACCACTGCCAATTCAGAGTCAGCACAGCATTAGACAGAGTCAGCAG CAGCAGCAGCCATGGCCGACAAAAAGGTAGCGGAACAGTACTATGCCCCGCCGCCCAAGCTGGGCAAATGGGAAGGATTTAGGACGTTCCTGTGGAACAGCGAAACCAGCCAATGCCTTGGCCGCACCG ] [+] EMBL BM629558 [ CCGCGACTGAATCGGTTACAGGCGTATCGTAGCTGCTGGTCGAGCGCGTTTCATTACGCACTCCTCCAAACCTCCGCCACCCTCCCCCACTAGAAACGTTGTGCTCTACGCCGTTGTGTGGTTCGGGGATCAGAGAGAGAGAGTGAGCGAGCGAGCGAGCGCTGGTGCTGGGAACGAGTTTGCTGCTGTTTGCGAGTGTGTGCATGGGTGTGTGAGCGTTCGCGCGCGTGTTTGTGGATAACCGAAAGCGGAAGCGGAAGCGAGAGAGCGAGAGCGGTGCATCGAGAAAGAAGAAGCAGTAGAGGGAGAGAGGAAAAAACAAGTGCTCGTCGTGTACCTTGTGCGGTGCTCGAAGGATCAAAGATCGATTGCCTGCCTGGCCCAGTAATACGGGCGTGTGTGTGGTCGTGTGGCCGTGTGTGAGAGAGTGTGTGTGTGTGAGTGTTTGTGAAGAAAAGCTGCGAACCAGCACAGGTGCGATCGTCGCGCGCGCGTTCGACAGGACTGAACGGACCACTGCCAATTCAGAGTCAGCACAGCATTAGACAGA ] [+] EMBL BM625400 [ ccgCTGAATCGGTTACAGGCGTATCGTAGCTGCTGGTCGAGCGCGTTTCATTACGCACTCCTCCAAACCTCCGCCACCCTCCCCCACTAGAAACGTTGTGCTCTACGCCGTTGTGTGGTTCGGGGATCAGAGAGAGAGAGTGAGCGAGCGAGCGAGCGCTGGTGCTGGGAACGAGTTTGCTGCTGTTTGCGAGTGTGTGCATGGGTGTGTGAGCGTTCGCGCGCGTGTTTGTGGATAACCGAAAGCGGAAGCGGAAGCGAGAGAGCGAGAGCGGTGCATCGAGAAAGAAGAAGCAGTAGAGGGAGAGAGGAAAAAACAAGTGCTCGTCGTGTACCTTGTGCGGTGCTCGAAGGATCAAAGATCGATTGCCTGCCTGGCCCAGTAATACGGGCGTGTGTGTGGTCGTGTGGCCGTGTGTGAGAGAGTGTGTGTGTGTGAGTGTTTGTGAAGAAAAGCTGCGAACCAGCACAGGTGCGATCGTCGCGCGCGCGTTCGACAGGACTGAACGGACCACTGCCAATTCAGAGTCAGCACAGCATTAGACAGAGTCAGCAG GCAGCAGCCATGGCCGACAAAAAGGTAGCGGAACAGTACTATGCCCCGCCGCCCAAGCTGGGCAAATGGGAAGGATTTAGGACGTTCCTGTGGAACAGCGAAACCAGCCAATGCCTTGGCCGCACCGGATCGAGCTG ] [+] EMBL BM590421 [ ccgGAATCGGTTACAGGCGTATCGTAGCTGCTGGTCGAGCGCGTTTCATTACGCACTCCTCCAAACCTCCGCCACCCTCCCCCACTAGAAACGTTGTGCTCTACGCCGTTGTGTGGTTCGGGGATCAGAGAGAGAGAGTGAGCGAGCGAGCGAGCGCTGGTGCTGGGAACGAGTTTGCTGCTGTTTGCGAGTGTGTGCATGGGTGTGTGAGCGTTCGCGCGCGTGTTTGTGGATAACCGAAAGCGGAAGCGGAAGCGAGAGAGCGAGAGCGGTGCATCGAGAAAGAAGAAGCAGTAGAGGGAGAGAGGAAAAAACAAGTGCTCGTCGTGTACCTTGTGCGGTGCTCGAAGGATCAAAGATCGATTGCCTGCCTGGCCCAGTAATACGGGCGTGTGTGTGGTCGTGTGGCCGTGTGTGAGAGAGTGTGTGTGTGTGAGTGTTTGTGAAGAAAAGCTGCGAACCAGCACAGGTGCGATCGTCGCGCGCGCGTTCGACAGGACTGAACGGACCACTGCCAATTCAGAGTCAGCACAGCATTAGACAGAGTCAGCAG CAGCAGCAACCATGGCCGACAAAAAGGTAGCGGAACAGTACTATGCCC ] [+] EMBL BM634482 [ ccgATCGGTTACAGGCGTATCGTAGCTGCTGGTCGAGCGCGTTTCATTACGCACTCCTCCAAACCTCCGCCACCCTCCCCCACTAGAAACGTTGTGCTCTACGCCGTTGTGTGGTTCGGGGATCAGAGAGAGAGAGTGAGCGAGCGAGCGAGCGCTGGTGCTGGGAACGAGTTTGCTGCTGTTTGCGAGTGTGTGCATGGGTGTGTGAGCGTTCGCGCGCGTGTTTGTGGATAACCGAAAGCGGAAGCGGAAGCGAGAGAGCGAGAGCGGTGCATCGAGAAAGAAGAAGCAGTAGAGGGAGAGAGGAAAAAACAAGTGCTCGTCGTGTACCTTGTGCGGTGCTCGAAGGATCAAAGATCGATTGCCTGCCTGGCCCAGTAATACGGGCGTGTGTGTGGTCGTGTGGCCGTGTGTGAGAGAGTGTGTGTGTGTGAGTGTTTGTGAAGAAAAGCTGCGAACCAGCACAGGTGCGATCGTCGCGCGCGCGTTCGACAGGACTG ] [+] EMBL BM631468 [ ccgATCGGTTACAGGCGTATCGTAGCTGCTGGTCGAGCGCGTTTCATTACGCACTCCTCCAAACCTCCGCCACCCTCCCCCACTAGAAACGTTGTGCTCTACGCCGTTGTGTGGTTCGGGGATCAGAGAGAGAGAGTGAGCGAGCGAGCGAGCGCTGGTGCTGGGAACGAGTTTGCTGCTGTTTGCGAGTGTGTGCATGGGTGTGTGAGCGTTCGCGCGCGTGTTTGTGGATAACCGAAAGCGGAAGCGGAAGCGAGAGAGCGAGAGCGGTGCATCGAGAAAGAAGAAGCAGTAGAGGGAGAGAGGAAAAAACAAGTGCTCGTCGTGTACCTTGTGCGGTGCTCGAAGGATCAAAGATCGATTGCCTGCCTGGCCCAGTAATACGGGCGTGTGTGTGGTCGTGTGGCCGTGTGTGAGAGAGTGTGTGTGTGTGAGTGTTTGTGAAGAAAAGCTGCGAACCAGCACAGGTGCGATCGTCGCGCGCGCGTTCGACAGGACTGAACGGACCACTGCCAATTCAGAGTCAGCACAGCATTAGACAGAGTCAGCAG CAGCAGCAGCCATGGCCGACAAAAAGGTAGCGGAACAGTACTATGCCCCGCCGCCCAAGCTGGGCAAATGGGAAGGATTTAGGACGTTCCTGTGGAACAGCGAAACCAGCCAATGCCTTGGCCGCAC ] [+] EMBL BM611751 [ ccGGTCGAGCGCGTTTCATTACGCACTCCTCCAAACCTCCGCCACCCTCCCCCACTAGAAACGTTGTGCTCTACGCCGTTGTGTGGTTCGGGGATCAGAGAGAGAGAGTGAGCGAGCGAGCGAGCGCTGGTGCTGGGAACGAGTTTGCTGCTGTTTGCGAGTGTGTGCATGGGTGTGTGAGCGTTCGCGCGCGTGTTTGTGGATAACCGAAAGCGGAAGCGGAAGCGAGAGAGCGAGAGCGGTGCATCGAGAAAGAAGAAGCAGTAGAGGGAGAGAGGAAAAAACAAGTGCTCGTCGTGTACCTTGTGCGGTGCTCGAAGGATCAAAGATCGATTGCCTGCCTGGCCCAGTAATACGGGCGTGTGTGTGGTCGTGTGGCCGTGTGTGAGAGAGTGTGTGTGTGTGAGTGTTTGTGAAGAAAAGCTGCGAACCAGCACAGGTGCGATCGTCGCGCGCGCGTTCGACAGGACTGAACGGACCACTGCCAATTCCGAGTCAGCACAGCATTAGACAGAGTCAGCAG CAGCAGCAGCCATGGCCGACAAAAAGGTAGCGGAACAGTACTATGCCCCGCCGCCCAAGCTGGGCAAATGGGAAGGATTTAGGACGTTCCTGTGGAACAGCGAAACCAGCCAATGCCTTGGCCGCACCGGATCGAGCTGGGCGAATATCCTCTTCTTCTACGTGTGCTTTTATGCTG ] [+] EMBL BM629888 [ ccgGGTGCATCGAGAAAGAAGAAGCAGTAGAGGGAGAGAGGAAAAAACAAGTGCTCGTCGTGTACCTTGTGCGGTGCTCGAAGGATCAAAGATCGATTGCCTGCCTGGCCCAGTAATACGGGCGTGTGT GTGTGGCCGTGTGTGAGAGAGTGTGTGTGTGTGAGTGTTTGTGAAGAAAAGCTGCGAACCAGCACAGGTGCGATCGTCGCGCGCGCGTTCGACAGGACTGAACGGACCACTGCCAATTCAGAGTCAGCACAGCATTAGACAGAG ] [+] EMBL BM652484 [ ccGGAGAGAGGAAAAAACAAGTGCTCGTCGTGTACCTTGTGCGGTGCTCGAAGGATCAAAGATCGATTGCCTGCCTGGCCCAGTAATACGGGCGTGTGT GTGTGGCCGTGTGTGAGAGAGTGTGTGTGTGTGAGTGTTTGTGAAGAAAAGCTGCGAACCAGCACAGGTGCGATCGTCGCGCGCGCGTTCGACAGGACTGAACGGACCACTGCCAATTCAGAGTCAGCACAGCATTAGACAGAGTCAGCAGCAGCACCAGCAGCAGCCATGGCCGACAAAAAGGTAGCGGAACAGTACTATGCCCCGCCGCCCAAGCTGGGCAAATGGGAAGGATTTAGGACGTTCCTGTGGAACAGCGAAACCAGCCAATGCCTTGGCCGCACCGGATCGAGCTGGGCGAAAATCCTCTTCTTCTACGTGTGCTTTTATGCTGCCCTGGTCGGATTCTTTGCCGCGATGCTGGCCGTGTTCTGGCAGACGCTCGACATGCATATGCCTAAATAT ] [+] EMBL BM638308 [ ccGGCCGTGTGTGAGAGAGTGTGTGTGTGTGAGTGTTTGTGAAGAAAAGCTGCGAACCAGCACAGGTGCGATCGTCGCGCGCGCGTTCGACAGGACTGAACGGACCACTGCCAATTCAGAGTCAGCACAGCATTAGACAGAGTCAGCAG CAGCAGCAGCCATGGCCGACAAAAAGGTAGCGGAACAGTACTATGCCCCGCCGCCCAAGCTGGGCAAATGGGAAGGATTTAGGACGTTCCTGTGGAACAGCGAAACCAGCCAATGCCTTGGCCGCACCGGATCGAGCTGGGCGAAAATCCTCTTCTTCTACGTGTGCTTTTATGCTGCCCTGGTCGGATTCTTTGCCGCGATGCTGGCCGTGTTCTGGCAGACGCTCGACATGCATATGCCTAAATATCAGCTTGACAGTTCGCTGATTGGATCGAATCCAGGTCTGGGCTTTCGACCAACACCGCCAGAGTACCAGAACGTGGAGAGCTCGTTAATCTGGTACAAAGCTTCCGACAATGGAAACGTTGGGATCTGGACCAAACTAATCGATGAGTTTCTGGAGCCTTACACGGTAGAGGAAGACAACCGCGTCGATTGCTCGTTCGACAATCCGCCGCCGGAGGGCAAGG ] [+] EMBL BM653412 [ ccGGCAAATGGGAAGGATTTAGGACGTTCCTGTGGAACAGCGAAACCAGCCAATGCCTTGGCCGCACCGGATCGAGCTGGGCGAAAATCCTCTTCTTCTACGTGTGCTTTTATGCTGCCCTGGTCGGATTCTTTGCCGCGATGCTGGCCGTGTTCTGGCAGACGCTCGACATGCATATGCCTAAATATCAGCTTGACAGTTCGCTGATTGGATCGAATCCAGGTCTGGGCTTTCGACCAACACCGCCAGAGTACCAGAACGTGGAGAGCTCGTTAATCTGGTACAAAGCTTCCGACAATGGAAACGTTGGGATCTGGACCAAACTAATCGATGAGTTTCTGGAGCCTTACACGGTAGAGGAAGACAACCGCGTCGATTGCTCGTTCGACAATCCGCCGCCGGAGGGCAAGGTTTGCAAAGTTCCTATGACTAACTGGTCTCCGTGCGTCAAGGAAAATCAATACAACTTTAAGAAGAAGAGCCCGTGCATATTCTTGAAGCTGAACAAGATCTACAACTGGGTCCCAGATATGTACAATACCTCGACCAACTTGCCGGAGAAAATGCCCGATGATCTGAAGGAGCACATCCGCGGAGAGGAAGCCCGAGGAAACAAGAACACCAACGTGGTTTGGGTTTCCTGCTCCGGTGAAAACCCTGCCGATAATGAGCACATCGGTGCGAT] [+] EMBL BM638535 [ ccgGGACGTTCCTGTGGAACAGCGAAACCAGCCAATGCCTTGGCCGCACCGGATCGAGCTGGGCGAAAATCCTCTTCTTCTACGTGTGCTTTTATGCTGCCCTGGTCGGATTCTTTGCCGCGATGCTGGCCGTGTTCTGGCAGACGCTCGACATGCATATGCCTAAATATCAGCTTGACAGTTCGCTGATTGGATCGAATCCAGGTCTGGGCTTTCGACCAACACCGCCAGAGTACCAGAACGTGGAGAGCTCGTTAATCTGGTACAAAGCTTCCGACAATGGAAACGTTGGGATCTGGACCAAACTAATCGATGAGTTTCTGGAGCCTTACACGGTAGAGGAAGACAACCGCGTCGATTGCTCGTTCGACAATCCGCCGCCGGAGGGCAAGGTTTGCAAAGTTCCTATGACTAACTGGTCTCCGTGCGTCAAGGAAAATCAATACAACTTTAAGAAGAAGAGCCCGTGCATATTCTTGAAGCTGAACAAGATCTACAACTGGGTCCCAGATATGTACAATACCTCGACCAACTTGCCGGAGAAAATGCCCGATGATCTGAAGGAGCACATCCGCGGAGAGGAAGCCCGAGGAAATAAGAACACCA ] [+] EMBL BM654876 [ ccgGCCTTGGCCGCACCGGATCGAGCTGGGCGAAAATCCTCTTCTTCTACGTGTGCTTTTATGCTGCCCTGGTCGGATTCTTTGCCGCGATGCTGGCCGTGTTCTGGCAGACGCTCGACATGCATATGCCTAAATATCAGCTTGACAGTTCGCTGATTGGATCGAATCCAGGTCTGGGCTTTCGACCAACACCGCCAGAGTACCAGAACGTGGAGAGCTCGTTAATCTGGTACAAAGCTTCCGACAATGGAAACGTTGGGATCTGGACCAAACTAATCGATGAGTTTCTGGAGCCTTACACGGTAGAGGAAGACAACCGCGTCGATTGCTCGTTCGACAATCCGCCGCCGGAGGGCAAGGTTTGCAAAGTTCCTATGACTAACTGGTCTCCGTGCGTCAAGGAAAATCAATACAACTTTAAGAAGAAGAGCCCGTGCATATTCTTGAAGCTGAACAAGATCTACAACTGGGTCCCAGATATGTACAATACCTCGACCAACTTGCCGGAGAAAATGCCCGATGATCTGAAGGAGCACATCCGCGGAGAGGAAGCCCGAGGAAATAAGAACACCAACGTGGTTTGGGTTTCCTGCTCCGGTGAAAA ] consensusID : consensus_9718#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 680 fasta sequence [GAATTGCCCGAGGTTTGTGTGGTTTTCGTCTAAATAACGGAAACAATTTCCATCGATTTCGGATTCGTACGGTTTATCTACAGATCGTCCAACAATGTCCACTGTAGCAAGTGCCCTAGCCTTGTGCCGGCAACCGGTCGTCCGGAGCGCCCGTCCGCACACAAAATGTGATGGCCTGCAAGCTCAATCGCAAACATAGTGAAATCCTCACTCGGACCTGTCGGCCTGGACAAGATGCTGGTGGACGATATCGGCGACGTGACGGTGACCAACGATGGGGCTACCATTTTTGAAGCTGCTGGAGGTGGAACATCCGGCTGCCAAGGTGCTGTGCGAGCTGGCCCAGCTGCAGGACGAGGAGGTCGGCGATGGCACCACCTCGGTCGTAATCATTGCGGTGAGCTGCTGAAGAACGCCGACGAGCTGGTGAAACAGAAGATCCATCCGAACTCGATCATTGCCGGCTACCGTTTGGCGTGTAAGGAGGCGTGCAAATACATTTCCGAGCACCTGACCGCCCGGTGGACGATCTGGGACGCGAAACACTGATCAATGTGGCGAAAACATCGATGAGCTCTAAGATCATCGGTGCCGATGACGGACTTTNTTCGCCACNATGGTGGTGGACGCAGCACAGGCAGTGAAAATCCTCGACCCGAAGGGCAACCCGGCTACCCGAT] [+] EMBL AL930307 [GAATTGCCCGAGGTTTGTGTGGTTTTCGTCTAAATAACGGAAACAATTTCCATCGATTTCGGATTCGTACGGTTTATCTACAGATCGTCCAACAATGTCCACTGTAGCAAGTGCCCTAGCCTTGTGCCGGCAACCGGTCGTCCGGAGCGCCCGTCCGCACACAAAATGTGATGGCCTGCAAGCTCAATCGCAAACATAGTGAAATCCTCACTCGGACCTGTCGGCCTGGACAAGATGCTGGTGGACGATATCGGCGACGTGACGGTGACCAACGATGGGGCTACCATTTTTGAAGCTGCTGGAGGTGGAACATCCGGCTGCCAAGGTGCTGTGCGAGCTGGCCCAGCTGCAGGACGAGGAGGTCGGCGATGGCACCACCTCGGTCGTAATCATTGCGGTGAGCTGCTGAAGAACGCCGACGAGCTGGTGAAACAGAAGATCCATCCGAACTCGATCATTGCCGGCTACCGTTTGGCGTGTAAGGAGGCGTGCAAATACATTTCCGAGCACCTGACCGCCCGGTGGACGATCTGGGACGCGAAACACTGATCAATGTGGCGAAAACATCGATGAGCTCTAAGATCATCGGTGCCGATGACGGACTTTNTTCGCCACNATGGTGGTGGACGCAGCACAGGCAGTGAAAATCCTCGACCCGAAGGGCAACCCGGCTACCCGAT] consensusID : consensus_9718#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 580 fasta sequence [TTTTTTTTTTTTTTTCTTCTTCTACGTGTGCTTTTATGCTGCCCTGGTCGGATTCTTTGCCGCGATGCTGGCCGTGTTCTGGCAGACGCTCGACATGCATATGCCTAAATATCAGCTTGACAGTTCGCTGATTGGATCGAATCCAGGTCTGGGCTTTCGACCAACACCGCCAGAGTACCAGAACGTGGAGAGCTCGTTAATCTGGTACAAAGCTTCCGACAATGGAAACGTTGGGATCTGGACCAAACTAATCGATGAGTTTCTGGAGCCTTACACGGTAGAGGAAGACAACCGCGTCGATTGCTCGTTCGACAATCCGCCGCCGGAGGGCAAGGTTTGCAAAGTTCCTATGACTAACTGGTCTCCGTGCGTCAAGGAAAATCAATACAACTTTAAGAAGAAGAGCCCGTGCATATTCTTGAAGCTGAACAAGATCTACAACTGGGTCCCAGATATGTACAATACCTCGACCAACTTGCCGGAGAAAATGCCCGATGATCTGAAGGAGCACATCCGCGGAGAGGAAGCCCGAGGAAATAAGAACACCAACGTGGTTTGGGTTTCCTGCTCCGGTGAAAAC] [+] EMBL AGA284552 [TTTTTTTTTTTTTTTCTTCTTCTACGTGTGCTTTTATGCTGCCCTGGTCGGATTCTTTGCCGCGATGCTGGCCGTGTTCTGGCAGACGCTCGACATGCATATGCCTAAATATCAGCTTGACAGTTCGCTGATTGGATCGAATCCAGGTCTGGGCTTTCGACCAACACCGCCAGAGTACCAGAACGTGGAGAGCTCGTTAATCTGGTACAAAGCTTCCGACAATGGAAACGTTGGGATCTGGACCAAACTAATCGATGAGTTTCTGGAGCCTTACACGGTAGAGGAAGACAACCGCGTCGATTGCTCGTTCGACAATCCGCCGCCGGAGGGCAAGGTTTGCAAAGTTCCTATGACTAACTGGTCTCCGTGCGTCAAGGAAAATCAATACAACTTTAAGAAGAAGAGCCCGTGCATATTCTTGAAGCTGAACAAGATCTACAACTGGGTCCCAGATATGTACAATACCTCGACCAACTTGCCGGAGAAAATGCCCGATGATCTGAAGGAGCACATCCGCGGAGAGGAAGCCCGAGGAAATAAGAACACCAACGTGGTTTGGGTTTCCTGCTCCGGTGAAAAC] consensusID : consensus_9718#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 379 fasta sequence [GCCCGAGGCNGTTAAGGCGTATGTAGCTGCTGGTCGAGCGCGTTTCATTACGCACTCCTCCAAACCTCCGCCACCCTCCCCCACTAGAAACGTTGTGCTCTACGCCGTTGTGTGGTTCGGGGATCAGAGAGAGAGAGTGAGCGAGCGAGCGAGCGCTGGTGCTGGGAACGAGTTTGCTGCTGTTTGCGAGTGTGTGCATGGGTGTGTGAGCGTTCGCGCGCGTGTTTGTGGATAACCGAAAGCGGAAGCGGAAGCGAGAGAGCGAGAGCGGTGCATCGAGAAAGAAGAAGCAGTAGAGGGAGAGAGGAAAAAACAAGTGCTCGTCGTGTACCTTGTGCGGTGCTCGAAGGATCAAAGATCGATTGCCTGCCTGGCCCAG] [+] EMBL AL930129 [GCCCGAGGCNGTTAAGGCGTATGTAGCTGCTGGTCGAGCGCGTTTCATTACGCACTCCTCCAAACCTCCGCCACCCTCCCCCACTAGAAACGTTGTGCTCTACGCCGTTGTGTGGTTCGGGGATCAGAGAGAGAGAGTGAGCGAGCGAGCGAGCGCTGGTGCTGGGAACGAGTTTGCTGCTGTTTGCGAGTGTGTGCATGGGTGTGTGAGCGTTCGCGCGCGTGTTTGTGGATAACCGAAAGCGGAAGCGGAAGCGAGAGAGCGAGAGCGGTGCATCGAGAAAGAAGAAGCAGTAGAGGGAGAGAGGAAAAAACAAGTGCTCGTCGTGTACCTTGTGCGGTGCTCGAAGGATCAAAGATCGATTGCCTGCCTGGCCCAG] consensusID : consensus_9718#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 216 fasta sequence [TNATGGCCTCGAGGCAAGAATCGCCAGCAGGTTTCAACTTCACTCACAATTCTGTGCATTTCTGTGATAAAACACTCTACAAGATTTCCCATCCTCCGGTCATCCCGTCCAAACCCAACATGGATGCACTGAACGTGATCGAGAAGCGCATTGATAATCTAAACAACTGGTCGGACCGCTGGCAACGATGAGAGCCAGGCGGAAAAACTAACGATG] [+] EMBL AL696654 [TNATGGCCTCGAGGCAAGAATCGCCAGCAGGTTTCAACTTCACTCACAATTCTGTGCATTTCTGTGATAAAACACTCTACAAGATTTCCCATCCTCCGGTCATCCCGTCCAAACCCAACATGGATGCACTGAACGTGATCGAGAAGCGCATTGATAATCTAAACAACTGGTCGGACCGCTGGCAACGATGAGAGCCAGGCGGAAAAACTAACGATG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9718#0 ----------------------------------------------------------CC 2 consensus_9718#3 ------------------------------------------------------------ consensus_9718#2 TTTTTTTTTTTTTTTCTTCTTCTACGTGTGCTTTTATGCTGCCCTGGTCGGATTCTTTGC 60 consensus_9718#4 -----------------------------------------------------TNATGGC 7 consensus_9718#1 ---------GAATTGCCCGAGGTTTGTGTGGTTTTCGTCTAAATAACGGAAACAATTTCC 51 consensus_9718#0 GCCCACGCGTC--CGCCGCGACTGAATCGGTTACAGGCGTA-TCGTAGCTGCTGGTCGAG 59 consensus_9718#3 -------------------GCCCGAGGCNGTTA-AGGCGTA-T-GTAGCTGCTGGTCGAG 38 consensus_9718#2 CGCGATGCTGG--CCGTGTTCTGGCAGACGCTCGACATGCA-T-ATGCCTAAATATC-AG 115 consensus_9718#4 CTCGAGGCAAGAATCGCCAGCAGGTTTCAACTTCACTCACAATTCTGTGCATTTCTGTGA 67 consensus_9718#1 ATCGATTTCGGATTCGTACG-GTTTATCTACAGATCGTCCAACAATGTCCACTGTAGCAA 110 * * consensus_9718#0 ----CGCGTTTCATTACGCACTCCTCCAAACCTCCGCCACCCTCCCCCA--CTAGAAAC- 112 consensus_9718#3 ----CGCGTTTCATTACGCACTCCTCCAAACCTCCGCCACCCTCCCCCA--CTAGAAAC- 91 consensus_9718#2 ----CTTGACAGTTCGCTGATTGGATCGAATCCAGGTCTGGGCTTTCGA--CCAACACC- 168 consensus_9718#4 ----TAAAACACTCTACAAGATTTCCCATCCTCCGGTCATCCCGTCCAAACCCAACATG- 122 consensus_9718#1 GTGCCCTAGCCTTGTGCCGG-CAACCGGTCGTCCGGAGCGCCCGTCCGCACACAAAATGT 169 * * * * * consensus_9718#0 GTT-GTGCTCTACGCCGTTGTGTGGTTCGGGGATCAGAGAGAG--AGAGTGAGCGAGCG- 168 consensus_9718#3 GTT-GTGCTCTACGCCGTTGTGTGGTTCGGGGATCAGAGAGAG--AGAGTGAGCGAGCG- 147 consensus_9718#2 GCCAGAGTACCAGAACGTGGAG-AGCTCGTTAATCTGGTACAA--AGCTT--CCGACAA- 222 consensus_9718#4 GAT-GCACTGAACGTGATCGAGAAGCGCATTGATAATCTAAAC--AACTGGTCGGACCGC 179 consensus_9718#1 GATGGCCTGCAAGCTCAATCGCAAACATAGTGAAATCCTCACTCGGACCTGTCGGCCTGG 229 * * * * * consensus_9718#0 AGCGAGCGCTGG-TGCTGGGAAC--GAGTTTGCTGCTG--TTTGCGAGTGTGTGCATGGG 223 consensus_9718#3 AGCGAGCGCTGG-TGCTGGGAAC--GAGTTTGCTGCTG--TTTGCGAGTGTGTGCATGGG 202 consensus_9718#2 TGGAAACGTTGG-GATCTGGACC--AAACTAATCGATGAGTTTCTGGAGCCTTACACGGT 279 consensus_9718#4 TGGCAACGATGA-GAGCCAGGCGGAAAAACTAACGATG---------------------- 216 consensus_9718#1 ACAAGATGCTGGTGGACGATATCGGCGACGTGACGGTGA-CCAACGATGGGGCTACCATT 288 * ** * ** consensus_9718#0 TGTGTGAG-CGTTCGCG-CGCGTGTTTGTG-GATAACCGAAAGCGGAAGCGGAAG----- 275 consensus_9718#3 TGTGTGAG-CGTTCGCG-CGCGTGTTTGTG-GATAACCGAAAGCGGAAGCGGAAG----- 254 consensus_9718#2 AGAGGAAGACAACCGCGTCGATTGCTCGTTCGACAATCCGCCGCCGGAGGGCAAGGTTTG 339 consensus_9718#4 ------------------------------------------------------------ consensus_9718#1 TTTGAAGCTGCTGGAGGTGGAACATCCGGCTGCCAAGGTGCTGTGCGAGCTGGCCCAGC- 347 consensus_9718#0 CGAGA-------GAGCGAGAGCGGTGCATCGAGAAAGAAGAAGCAGTAGAGGGAGAGAGG 328 consensus_9718#3 CGAGA-------GAGCGAGAGCGGTGCATCGAGAAAGAAGAAGCAGTAGAGGGAGAGAGG 307 consensus_9718#2 CAAAGTTCCTATGACTAACTGGTCTCCGTGCGTCAAGGAAAATCAATACAACTTTAAGAA 399 consensus_9718#4 ------------------------------------------------------------ consensus_9718#1 TGCAGGACGAGGAGGTCGGCGATGGCACCACCTCGGTCGTAATCATTGCGGTGAGCTGCT 407 consensus_9718#0 AAAAAACAAGTGCTCGTCGTGTACCTTGTGCGGTGCTCGAA---GGATCAAAGATCGATT 385 consensus_9718#3 AAAAAACAAGTGCTCGTCGTGTACCTTGTGCGGTGCTCGAA---GGATCAAAGATCGATT 364 consensus_9718#2 GAAGAGCCCGTGCATATTCTTGAAGCTGAACAAGATCTACAACTGGGTCCCAGATATGTA 459 consensus_9718#4 ------------------------------------------------------------ consensus_9718#1 GAAGAACGCCGACGAGCTGGTGAAACAGAAGATCCATCCGAACTCGATCATTGCCGGCTA 467 consensus_9718#0 GCCTGCCTGGCCCAGTAATACGGGCGTGTGTGTGGTCGTGTGGCCGTG-TGTGAGAGAGT 444 consensus_9718#3 GCCTGCCTGGCCCAG--------------------------------------------- 379 consensus_9718#2 CAATACCTCGACCAACTTGCCGGAGAAAATGCCCGATGATCTGAAGGA-GCACATCCGCG 518 consensus_9718#4 ------------------------------------------------------------ consensus_9718#1 CCGTTTGGCGTGTAAGGAGGCGTGCAAATACATTTCCGAGCACCTGACCGCCCGGTGGAC 527 consensus_9718#0 GTGTGTGTGTGAGTGTTTGTGAAGAAAAGCTGCGAACCAGCACAGGTGCGATCGTCGCGC 504 consensus_9718#3 ------------------------------------------------------------ consensus_9718#2 GAGAGGAAGCCCGAGGAAATAAGAACACCAACGTGGTTTGGGTTTCCTGCTCCGGTGAAA 578 consensus_9718#4 ------------------------------------------------------------ consensus_9718#1 GATCTGGGACGCGAAACACTGATCAATGTGGCGAAAACATCGATGAGCTCTAAGATCATC 587 consensus_9718#0 GCGCGTTCGACAGGACTGAACGGACCACTGCCAATTCAGAGTCAGCACAGCATTAGACAG 564 consensus_9718#3 ------------------------------------------------------------ consensus_9718#2 AC---------------------------------------------------------- 580 consensus_9718#4 ------------------------------------------------------------ consensus_9718#1 GGTGCCGATGACGGACTTTNTTCGCCACNATGGTGGTGGACGCAGCACAGGCAGTGAAAA 647 consensus_9718#0 AGTCAGCAGCAGCAGCAGCCATGGCCGACAAAAAGGTAGCGGAACAGTACTATGCCCCGC 624 consensus_9718#3 ------------------------------------------------------------ consensus_9718#2 ------------------------------------------------------------ consensus_9718#4 ------------------------------------------------------------ consensus_9718#1 TCCTCGACCCGAAGGGCAACCCGGCTACCCGAT--------------------------- 680 consensus_9718#0 CGCCCAAGCTGGGCAAATGGGAAGGATTTAGGACGTTCCTGTGGAACAGCGAAACCAGCC 684 consensus_9718#3 ------------------------------------------------------------ consensus_9718#2 ------------------------------------------------------------ consensus_9718#4 ------------------------------------------------------------ consensus_9718#1 ------------------------------------------------------------ consensus_9718#0 AATGCCTTGGCCGCACCGGATCGAGCTGGGCGAAAATCCTCTTCTTCTACGTGTGCTTTT 744 consensus_9718#3 ------------------------------------------------------------ consensus_9718#2 ------------------------------------------------------------ consensus_9718#4 ------------------------------------------------------------ consensus_9718#1 ------------------------------------------------------------ consensus_9718#0 ATGCTGCCCTGGTCGGATTCTTTGCCGCGATGCTGGCCGTGTTCTGGCAGACGCTCGACA 804 consensus_9718#3 ------------------------------------------------------------ consensus_9718#2 ------------------------------------------------------------ consensus_9718#4 ------------------------------------------------------------ consensus_9718#1 ------------------------------------------------------------ consensus_9718#0 TGCATATGCCTAAATATCAGCTTGACAGTTCGCTGATTGGATCGAATCCAGGTCTGGGCT 864 consensus_9718#3 ------------------------------------------------------------ consensus_9718#2 ------------------------------------------------------------ consensus_9718#4 ------------------------------------------------------------ consensus_9718#1 ------------------------------------------------------------ consensus_9718#0 TTCGACCAACACCGCCAGAGTACCAGAACGTGGAGAGCTCGTTAATCTGGTACAAAGCTT 924 consensus_9718#3 ------------------------------------------------------------ consensus_9718#2 ------------------------------------------------------------ consensus_9718#4 ------------------------------------------------------------ consensus_9718#1 ------------------------------------------------------------ consensus_9718#0 CCGACAATGGAAACGTTGGGATCTGGACCAAACTAATCGATGAGTTTCTGGAGCCTTACA 984 consensus_9718#3 ------------------------------------------------------------ consensus_9718#2 ------------------------------------------------------------ consensus_9718#4 ------------------------------------------------------------ consensus_9718#1 ------------------------------------------------------------ consensus_9718#0 CGGTAGAGGAAGACAACCGCGTCGATTGCTCGTTCGACAATCCGCCGCCGGAGGGCAAGG 1044 consensus_9718#3 ------------------------------------------------------------ consensus_9718#2 ------------------------------------------------------------ consensus_9718#4 ------------------------------------------------------------ consensus_9718#1 ------------------------------------------------------------ consensus_9718#0 TTTGCAAAGTTCCTATGACTAACTGGTCTCCGTGCGTCAAGGAAAATCAATACAACTTTA 1104 consensus_9718#3 ------------------------------------------------------------ consensus_9718#2 ------------------------------------------------------------ consensus_9718#4 ------------------------------------------------------------ consensus_9718#1 ------------------------------------------------------------ consensus_9718#0 AGAAGAAGAGCCCGTGCATATTCTTGAAGCTGAACAAGATCTACAACTGGGTCCCAGATA 1164 consensus_9718#3 ------------------------------------------------------------ consensus_9718#2 ------------------------------------------------------------ consensus_9718#4 ------------------------------------------------------------ consensus_9718#1 ------------------------------------------------------------ consensus_9718#0 TGTACAATACCTCGACCAACTTGCCGGAGAAAATGCCCGATGATCTGAAGGAGCACATCC 1224 consensus_9718#3 ------------------------------------------------------------ consensus_9718#2 ------------------------------------------------------------ consensus_9718#4 ------------------------------------------------------------ consensus_9718#1 ------------------------------------------------------------ consensus_9718#0 GCGGAGAGGAAGCCCGAGGAAATAAGAACACCAACGTGGTTTGGGTTTCCTGCTCCGGTG 1284 consensus_9718#3 ------------------------------------------------------------ consensus_9718#2 ------------------------------------------------------------ consensus_9718#4 ------------------------------------------------------------ consensus_9718#1 ------------------------------------------------------------ consensus_9718#0 AAAACCCTGCCGATAATGAGCACATCGGTGCGAT 1318 consensus_9718#3 ---------------------------------- consensus_9718#2 ---------------------------------- consensus_9718#4 ---------------------------------- consensus_9718#1 ---------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||