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Anopheles gambiae
cluster # 9740 cluster # 9740       Sequences # 20       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9740#0 length = 615 sequences # 14  
consensus_9740#1 length = 516 sequences # 3  
consensus_9740#2 length = 458 sequences # 3  

consensusID : consensus_9740#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 14
consensus length = 615
fasta sequence
                              [CCGCTGCCAATTTCGCTGCAAGTCGGTGTCGCACGATTGAAATAAAAACAACACAGCTCAGCTCAGCAGCGGAAAAACAA-----ACGCCGGAATGGCCTCACGGATGATTCTTTCGCCCGCCCGGCGACTGGCGAGCGTGGTCAGCACGCGCTCCATCACCACCCAGGTGCTTGCTACGCAGTGCGCCACCATTAAGGACGAAATCACACACACGGGACAGTTCTACGAAGCGAACGACTATCGGAATGCCCGTTTCGT-GAACGCTACCAAGGTGGTCAACCCGAACTGGGCCATTAAGCTGATCGACGAGCTGCCAATCGTCAAGTCGGAGCAGCGCGTCGTGTGCTGCGACGGTGGAACCGATCCCGCCCTTGGCCATCCCAAAGTGTACATCAATTTGGACAAACCCGGTGCCCATGCCTGCGGATACTGTGGGCAGCGTTTCGAGAAGATCGATCATCATCACTGAAGCAGCTTGCTTTTTTGCTGTGTGATCAAACAAA--ACAAACACAAATACGCCCGTCATGCTGCTTCGTTGAACCTTTAGTCAAATAAACGGAGGATATAAAAACCAAACT------AAAAAAAAAAAAAAAAAAAGGCCACATGTGCTCGAGCTTT]

[+] EMBL BM592189             [CCGCTGCCAATTTCGCTGCAAGTCGGTGTCGCACGATTGAAATAAAAACAACACAGCTCAGCTCAGCAGCGGAAAAACAA     ACGCCGGAATGGCCTCACGGATGATTCTTTCGCCCGCCCGGCGACTGGCGAGCGTGGTCAGCACGCGCTCCATCACCACCCAGGTGCTTGCTACGCAGTGCGCCACCATTAAGGACGAAATCACACACACGGGACAGTTCTACGAAGCGAACGACTATCGGAATGCCCGTTTCGT GAACGCTACCAAGGTGGTCAACCCGAACTGGGCCATTAAGCTGATCGACGAGCTGCCAATCGTCAAGTCGGAGCAGCGCATCGTGTGCTGCGACGGTGGAACCGATCCCGCCCTTGGCCATCCCAAAGTGTACATCAATTTGGACAAACCCGGTGCCCATGCCTGCGGATACTGTGGGCAGCGTTTCGAGAAGATCGATCATCATCACTGAAGCAGCTTGCTTTTTTGCTGTGTGATCAAACAAA  ACAAACACAAATACGCCCGTCATGCTGCTTCGTTGAACCTTTAGTCAAATAAACGGAGGATATAAAAAC                                                    ]
[+] EMBL BM641976             [                 ccgAGTCGGTGTCGCACGATTGAAATAAAAACAACACAGCTCAGCTCAGCAGCGGAAAAACAA     ACGCCGGAATGGCCTCACGGATGATTCTTTCGCCCGCCCGGCGACTGGCGAGCGTGGTCAGCACGCGCTCCATCACCACCCAGGTGCTTGCTACGCAGTGCGCCACCATTAAGGACGAAATCACACACACGGGACAGTTCTACGAAGCGAACGACTATCGGAATGCCCGTTTCGT GAACGCTACCAAGGTGGTCAACCCGAACTGGGCCATTAAGCTGATCGACGAGCTGCCAATCGTCAAGTCGGAGCAGCGCATCGTGTGCTGCGACGGTGGAACCGATCCCGCCCTTGGCCATCCCAAAGTGTACATCAATTTGGACAAACCCGGTGCCCATGCCTGCGGATACTGTGGGCAGCGTTTCGAGAAGATCGATCATCATCACTGAAGCAGCTTGCTTTTTTGCTGTGTGATCAAACAAA  ACAAACACAAATACGCCCGTCATGCTGCTTCGTTGAAC                                                                                   ]
[+] EMBL BM607734             [                          ccgCGCACGATCGAAATAAAAACAACACAGCTCAGTTCAGCAGCGGAAAAACAAATCACACGCCGGAATGGCCTCACGGATGATTCTTTCGCCCGCCCGGCGACTGGCGAACGTGGTCAGCACGCGCTCCATCACCACCCAGGTGCTTGCTACGCAGTGCGCCACCATTAAGGACGAAATCACACACACGGGACAGTTCTACGAAGCGAACGACTATCGGAATGCCCGTTTCGT GAACGCTACCAAGGTGGTCAACCCGAACTGGGCCATTAAGCTGATCGACGAGCTGCCAATCGTCAAGTCGGAGCAGCGCGTCGTGTGCTGCGACGGTGGAACCGATCCCGCCCTTGGCCATCCCAAAGTGTACATCAATTTGGACAAACCCGGTGCCCATGCCTGCGGATACTGTGGGCAGCGTTTCGAGAAGATCGATCATCATCACTGAAGCTGCTTGCTTTTTTGCTGTGTGATCAAACAAA  ACAAACACAAATACGCCCGTCATGCTGCTTCGTTGAACCTTTAGTCAAATAAACGGAGGATAT                                                          ]
[+] EMBL BM595977             [                           ccgGCACGATTGAAATAAAAACAACACAGCTCAGCTCAGCAGCGGAAAAACAA     ACGCCGGAATGGCCTCACGGATGATTCTTTCGCCCGCCCGGCGACTGGCGAGCGTGGTCAGCACGCGCTCCATCACCACCCAGGTGCTTGCTACGCAGTGCGCCACCATTAAGGACGAAATCACACACACGGGACAGTTCTACGAAGCGAACGACTATCGGAATGCCCGTTTCGT GAACGCTACCAAGGTGGTCAACCCGAACTGGGCCATTAAGCTGATCGACGAGCTGCCAATCGTCAAGTCGGAGCAGCGCATCGTGTGCTGCGACGGTGGAACCGATCCCGCCCTTGGCCATCCCAAAGTGTACATCAATTTGGACAAACCCGGTGCCCATGCCTGCGGATACTGTGGGCAGCGTTTCGAGAAGATCGATCATCATCACTGAAGCAGCTTGCTTTTTTGCTGTGTGATCAAACAAA  ACAAACACAAATACGCCCGTCATGCTGCTTCGTTGAACCTTTAGTCAAATAAACGGAGGATAT                                                          ]
[+] EMBL BM635136             [                                 ccgTTGAAATAAAAACAACACAGCTCAGCTCAGCAGCGGAAAAACAA     ACGCCGGAATGGCCTCACGGATGATTCTTTCGCCCGCCCGGCGACTGGCGAGCGTGGTCAGCACGCGCTCCATCACCACCCAGGTGCTTGCTACGCAGTGCGCCACCATTAAGGACGAAATCACACACACGGGACAGTTCTACGAAGCGAACGACTATCGGAATGCCCGTTTCGT GAACGCTACCAAGGTGGTCAACCCGAACTGGGCCATTAAGCTGATCGACGAGCTGCCAATCGTCAAGTCGGAGCAGCGCATCGTGTGCTGCGACGGTGGAACCGATCCCGCCCTTGGCCATCCCAAAGTGTACATCAATTTGGACAAACCCGGTGCCCATGCCTGCGGATACTGTGGGCAGCGTTTCGAGAAGATCGATCATCATCACTGAAGCAGCTTGCTTTTTTGCTGTGTGATCAAACAAA  ACAAACACAAATACGCCCGTCATGCTGCTTCGTTGA                                                                                     ]
[+] EMBL BX621332             [                                      GAAATAAAAACAACACAGCTCAGCTCAGCAGCGGAAAAACAAATCACACGCCGGAATGGCCTCACGGATGATTCTTTCGCCCGCCCGGCGACTGGCGAGCGTGGTCAGCACGCGCTCCATCACCACCCAGGTGCTTGCTACGCAGTGCGCCACCATTAAGGACGAAATCACACACACGGGACAGTTCTACGAAGCGAACGACTATCGGAATGCCCGTTTCGT GAACGCTACCAAGGTGGTCAACCCGAACTGGGCCATTAAGCTGATCGACGAGCTGCCAATCGTCAAGTCGGAGCAGCGCGTCGTGTGCTGCGACGGTGGAACCGATCCCGCCCTTGGCCATCCCAAAGTGTACATCAATTTGGACAAACCCGGTGCCCATGCCTGCGGATACTGTGGGCAGCGTTTCGAGAAGATCGATCATCATCACTGAAGCAGCTTGCTTTTTTGCTGTGTGATCAAACAAA    AAACACAAATACGCCCGTCATGCTGCTTCGTTGAACCTTTAGTCAAATAAACGGAGGATATAAA                                                       ]
[+] EMBL BX623219             [                                                                   AGCGGAAAAACAAATCACACGCCGGAATGGCCTCACGGATGATTCTTTCGCCCGCCCGGCGACTGGCGAGCGTGGTCAGCACGCGCTCCATCACCACCCAGGTGCTTGCTACGCAGTGCGCCACCATTAAGGACGAAATCACACACACGGGACAGTTCTACGAAGCGAACGACTATCGGAATGCCCGTTTCGT GAACGCTACCAAGGTGGTCAACCCGAACTGGGCCATTAAGCTGATCGACGAGCTGCCAATCGTCAAGTCGGAGCAGCGCGTCGTGTGCTGCGACGGTGGAACCGATCCCGCCCTTGGCCATCCCAAAGTGTACATCAATTTGGACAAACCCGGTGCCCATGCCTGCGGATACTGTGGGCAGCGTTTCGAGAAGATCGATCATCATCACTGAAGCAGCTTGCTTTTTTGCTGTGTGATCAAACAAA  ACAAACACAAATACGCCCGTCATGCTGCTTCGTTGAACCTTTAGTCAAATAAACGGAGGATATAAA                                                       ]
[+] EMBL BM642496             [                                                                   ccgaacAAATCAC     ACGCCGGAATGGCCTCACGGATGATTCTTTCGCCCGCCCGGCGACTGGCGAACGTGGTCAGCACGCGCTCCATCACCACCCAGGTGCTTGCTACGCAGTGCGCCACCATTAAGGACGAAATCACACACACGGGACAGTTCTACGAAGCGAACGACTATCGGAATGCCCGTTTCGT GAACGCTACCAAGGTGGTCAACCCGAACTGGGCCATTAAGCTGATCGACGAGCTGCCAATCGTCAAGTCGGAGCAGCGCGTCGTGTGCTGCGACGGTGGAACCGATCCCGCCCTTGGCCATCCCAAAGTGTACATCAATTTGGACAAACCCGGTGCCCATGCCTGCGGATACTGTGGGCAGCGTTTCGAGAAGATCGATCATCATCACTGAAGCTGCTTGCTTTTTTGCTGTGTGATTAAACAAA  ACAAACACAAATACGCCCGTCATGCTGCTTCGTTGAACCTTTAGTCAAATAAACGGAGGATATAAAAAC                                                    ]
[+] EMBL BX627937             [                                                                    aaaacAAATCAC     ACGCCGGAATGGCCTCACGGATGATTCTTTCGCCCGCCCGGCGACTGGCGAGCGTGGTCAGCACGCGCTCCATCACCACCCAGGTGCTTGCTACGCAGTGCGCCACCATTAAGGACGAAATCACACACACGGGACAGTTCTACGAAGCGAACGACTATCGGAATGCCCGTTTCGT GAACGCTACCAAGGTGGTCAACCCGAACTGGGCCATTAAGCTGATCGACGAGCTGCCAATCGTCAAGTCGGAGCAGCGCGTCGTGTGCTGCGACGGTGGAACCGATCCCGCCCTTGGCCATCCCAAAGTGTACATCAATTTGGACAAACCCGGTGCCCATGCCTGCGGATACTGTGGGCAGCGTTTCGAGAAGATCGATCATCATCACTGAAGCAGCTTGCTTTTTTGCTGTGTGATCAAACAAA  ACAAACACAAATACGCCCGTCATGCTGCTTCGTTGAACCTTTAGTCAAATAAACGGAGGATATAAAAA                                                     ]
[+] EMBL CNS08D5G             [                                                                           atCAC     ACGCCGGAATGGCCTCACGGATGATTCTTTCGCCCGCCCGGCGACTGGCGAGCGTGGTCAGCACGCGCTCCATCACCACCCAGGTGCTTGCTACGCAGTGCGCCACCATTAAGGACGAAATCACACACACGGGACAGTTCTACGAAGCGAACGACTATCGGAATGCCCGTTTCGT GAACGCTACCAAGGTGGTCAACCCGAACTGGGCCATTAAGCTGATCGACGAGCTGCCAATCGTCAAGTCGGAGCAGCGCGTCGTGTGCTGCGACGGTGGAACCGATCCCGCCCTTGGCCATCCCAAAGTGTACATCAATTTGGACAAACCCGGTGCCCATGCCTGCGGATACTGTGGGCAGCGTTTCGAGAAGATCGATCATCATCACTGAAGCAGCTTGCTTTTTTGCTGTGTGATCAAACAGA  ACAAACACAAATACGCCCGTCATGCTGCTTCGTTGAACCTTTAGTCAAATAAACGGAGGATATAAAAACCAAACT      AAAAAAAAAAAAAAAAAAAGGCCACATGTGCTCGAGCTTT]
[+] EMBL BX621107             [                                                                                     ACGCCGGAATGGCCTCACGGATGATTCTTTCGCCCGCCCGGCGACTGGCGAGCGTGGTCAGCACGCGCTCCATCACCACCCAGGTGCTTGCTACGCAGTGCGCCACCATTAAGGACGAAATCACACACACGGGACAGTTCTACGAAGCGAACGACTATCGGAATGCCCGTTTCGT GAACGCTACCAAGGTGGTCAACCCGAACTGGGCCATTAAGCTGATCGACGAGCTGCCAATCGTCAAGTCGGAGCAGCGCGTCGTGTGCTGCGACGGTGGAACCGATCCCGCCCTTGGCCATCCCAAAGTGTACATCAATTTGGACAAACCCGGTGCCCATGCCTGCGGATACTGTGGGCAGCGTTTCGAGAAGATCGATCATCATCACTGAAGCAGCTTGCTTTTTTGCTGTGTGATCAAACAAA  ACAAACACAAATACGCCCGTCATGCTGCTTCGTTGAACCTTTAGTCAAATAAACGGAGGATA                                                           ]
[+] EMBL BM630732             [                                                                                    ccgGCCGGAATGGCCTCACGGATGATTCTTTCGCCCGCCCGGTGACTGGCGAACGTGGTGAGCACGCGCTCCATCACCACCCAGGTGCTTGCTACGCAGTGCGCCACCATTAGGGACGAAATCACACACACGGGACAGCTCTACGAAGCGAACGACTATCGGAATGCCCGTTTCAA GAACGCTACCAAGGTGGTCAACCCGAACTGGGCCATTAAGCTGATCGACGAGCTGCCAATCGACAAGTCGGAGCAGCGCGTCGAGTGCTGCGACGGGGGAACCGATCCCGCCCTTGGTCATCCCAAAGTGTACATCAATTTGGACAAACCCGGGGCCCATGCCTGCGGATACTGTGGGCAGCGTTTCGAGAAGATCGATCATCATC                                                                                                                                                                  ]
[+] EMBL CNS08M97             [                                                                                            AATGGCCTCACGGATGATTCTTTCGCCCGCCCGGCGACTGGCGAGCGTGGTCAGCACGCGCTCCATCACCACCCAGGTGCTTGCTACGCAGTGCGCCACCATTAAGGACGAAAT  CACACACGGGACAGTTCTACGAAGCGAACGACTATCGGAATGCCCGTTTCGTGGAACGCTACCAAGGTGGTCAACCCGAACTGGGCCATTAAGCTGATCGACGAGCTGCCAATCGTCAAGTCGGAGCAGCGCGTCGTGTGCTGCGACGGTGGAACCGATCCCGCCCTTGGCCATCCCAAAGTGTACATCAATTTGGACAAACCCGGTGCCCATGCCTGCGGATACTGTGGGCAGCGTTTCGAGAAGATCGATCATCATCACTGAAGCAGCTTGCTTTTTTGCTGTGTGATCAAACACACCCCACCCACAAATACGCCCGTTATGCTGCTTCGTTGAACCTTTAGTCAAATAAACGGAGGATATAAAAACCAAACTAAAAAAAAAAAAAAAAAAAAAAAAAGGCCACATGTGCcc       ]
[-] EMBL CNS08D5H             [                                                                                                                                                                                                             taaaaaACACGGGACAGTTCTACGAAGCGAACGACTATCGGAATGCCCGTTTCGT GAACGCTACCAAGGTGGTCAACCCGAACTGGGCCATTAAGCTGATCGACGAGCTGCCAATCGTCAAGTCGGAGCAGCGCGTCGTGTGCTGCGACGGTGGAACCGATCCCGCCCTTGGCCATCCCAAAGTGTACATCAATTTGGACAAACCCGGTGCCCATG CTGCGGATACTGTGGGCAGCGTTTCGAGAAGATCGATCATCATCACTGAAGCAGCTTGCTTTTTTGCTGTGTGATCAAACAGA  ACAAACACAAATACGCCCGTCATGCTGCT                                                                                            ]


>consensus_9740#0 CCGCTGCCAATTTCGCTGCAAGTCGGTGTCGCACGATTGAAATAAAAACAACACAGCTCA GCTCAGCAGCGGAAAAACAAACGCCGGAATGGCCTCACGGATGATTCTTTCGCCCGCCCG GCGACTGGCGAGCGTGGTCAGCACGCGCTCCATCACCACCCAGGTGCTTGCTACGCAGTG CGCCACCATTAAGGACGAAATCACACACACGGGACAGTTCTACGAAGCGAACGACTATCG GAATGCCCGTTTCGTGAACGCTACCAAGGTGGTCAACCCGAACTGGGCCATTAAGCTGAT CGACGAGCTGCCAATCGTCAAGTCGGAGCAGCGCGTCGTGTGCTGCGACGGTGGAACCGA TCCCGCCCTTGGCCATCCCAAAGTGTACATCAATTTGGACAAACCCGGTGCCCATGCCTG CGGATACTGTGGGCAGCGTTTCGAGAAGATCGATCATCATCACTGAAGCAGCTTGCTTTT TTGCTGTGTGATCAAACAAAACAAACACAAATACGCCCGTCATGCTGCTTCGTTGAACCT TTAGTCAAATAAACGGAGGATATAAAAACCAAACTAAAAAAAAAAAAAAAAAAAGGCCAC ATGTGCTCGAGCTTT



consensusID : consensus_9740#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 516
fasta sequence
                              [CCGCCCACGCGTCCGCCCACGC--CCGAAACGCCGGAATGGCCTCACGGATGATTCTTTCGCCCGCCCGGCGACTGGCGAGCGTGGTCAGCACGCGCTCCATCACCACCCAGGTGCTTGCTACGCAGTGCGCCACCATTAAGGACGAAATCACACACACGGGACAGTTCTACGAAGCGAACGACTATCGGAATGCCCGTTTCGTGAACGCTACCAAGGTGGTCAACCCGAACTGGGCCATTAAGCTGATCGACGAGCTGCCAATCGTCAAGTCGGAGCAGCGCATCGTGTGCTGCGACGGTGGAACCGATCCCGCCCTTGGCCATCCCAAAGTGTACATCAATTTGGACAAACCCGGTGCCCATGCCTGCGGATACTGTGGGCAGCGTTTCGAGAAGATCGATCATCATCACTGAAGCAGCTTGCTTTTTTGCTGTGTGATCAAACAAAACAAACACAAATACGCCCGTCATGCTGCTTCGTTGAACCTTTAGTCAAATAAACGGAGGATATAAAAAC]

[+] EMBL BM650264             [CCGCCCACGCGTCCGCCCACGCGTCCG  ACGCCGGAATGGCCTCACGGATGATTCTTTCGCCCGCCCGGCGACTGGCGAGCGTGGTCAGCACGCGCTCCATCACCACCCAGGTGCTTGCTACGCAGTGCGCCACCATTAAGGACGAAATCACACACACGGGACAGTTCTACGAAGCGAACGACTATCGGAATGCCCGTTTCGTGAACGCTACCAAGGTGGTCAACCCGAACTGGGCCATTAAGCTGATCGACGAGCTGCCAATCGTCAAGTCGGAGCAGCGCATCGTGTGCTGCGACGGTGGAACCGATCCCGCCCTTGGCCATCCCAAAGTGTACATCAATTTGGACAAACCCGGTGCCCATGCCTGCGGATACTGTGGGCAGCGTTTCGAGAAGATCGATCATCATCACTGAAGCAGCTTGCTTTTTTGCTGTGTGATCAAACAAAACAAACACAAATACGCCCGTCATGCTGCTTCGTTGAACCTTTAGTCAAATAAACGGAGGATATAAAAAC]
[+] EMBL BM633054             [                        CCGAAACGCCGGAATGGCCTCACGGATGATTCTTTCGCCCGCCCGGCGACTGGCGAGCGTGGTCAGCACGCGCTCCATCACCACCCAGGTGCTTGCTACGCAGTGCGCCACCATTAAGGACGAAATCACACACACGGGACAGTTCTACGAAGCGAACGACTATCGGAATGCCCGTTTCGTGAACGCTACCAAGGTGGTCAACCCGAACTGGGCCATTAAGCTGATCGACGAGCTGCCAATCGTCAAGTCGGAGCAGCGCATCGTGTGCTGCGACGGTGGAACCGATCCCGCCCTTGGCCATCCCAAAGTGTACATCAATTTGGACAAACCCGGTGCCCATGCCTGCGGATACTGTGGGCAGCGTTTCGAGAAGATCGATCATCATCACTGAAGCAGCTTGCTTTTTTGCTGTGTGATCAAACAAAACAAACACAAATACGCCCGTCATGCTGCTTCGTTGAACCTTTAGTCAAATAAACGGAGGATA       ]
[+] EMBL BM608722             [                        CCGAAACGCCGGAATGGCCTCACGGATGATTCTTTCGCCCGCCCGGCGACTGGCGAGCGTGGTCAGCACGCGCTCCATCACCACCCAGGTGCTTGCTACGCAGTGCGCCACCATTAAGGACGAAATCACACACACGGGACAGTTCTACGAAGCGAACGACTATCGGAATGCCCGTTTCGTGAACGCTACCAAGGTGGTCAACCCGAACTGGGCCATTAAGCTGATCGACGAGCTGCCAATCGTCAAGTCGGAGCAGCGCATCGTGTGCTGCGACGGTGGAACCGATCCCGCCCTTGGCCATCCCAAAGTGTACATCAATTTGGACAAACCCGGTGCCCATGCCTGCGGATACTGTGGGCAGCGTTTCGAGAAGATCGATCATCATCACTGAAGCAGCTTGCTTTTTTGCTGTGTGATCAAACAAAACAAACACAAATACGCCCGTCATGCTGCTTCG                                     ]


>consensus_9740#1 CCGCCCACGCGTCCGCCCACGCCCGAAACGCCGGAATGGCCTCACGGATGATTCTTTCGC CCGCCCGGCGACTGGCGAGCGTGGTCAGCACGCGCTCCATCACCACCCAGGTGCTTGCTA CGCAGTGCGCCACCATTAAGGACGAAATCACACACACGGGACAGTTCTACGAAGCGAACG ACTATCGGAATGCCCGTTTCGTGAACGCTACCAAGGTGGTCAACCCGAACTGGGCCATTA AGCTGATCGACGAGCTGCCAATCGTCAAGTCGGAGCAGCGCATCGTGTGCTGCGACGGTG GAACCGATCCCGCCCTTGGCCATCCCAAAGTGTACATCAATTTGGACAAACCCGGTGCCC ATGCCTGCGGATACTGTGGGCAGCGTTTCGAGAAGATCGATCATCATCACTGAAGCAGCT TGCTTTTTTGCTGTGTGATCAAACAAAACAAACACAAATACGCCCGTCATGCTGCTTCGT TGAACCTTTAGTCAAATAAACGGAGGATATAAAAAC



consensusID : consensus_9740#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 458
fasta sequence
                              [TCCGGACGCGTGGGTGGCGAACGTGGTCAGCACGCGCTCCATCACCACCCAGGTGCTTGCTACGCAGTGCGCCACCATTAAGGACGAAATCACACACACGGGACAGTTCTACGAAGCGAACGACTATCGGAATGCCCGTTTCGTGAACGCTACCAAGGTGGTCAACCCGAACTGGGCCATTAAGCTGATCGACGAGCTGCCAATCGTCAAGTCGGAGCAGCGCGTCGTGTGCTGCGACGGTGGAACCGATCCCGCCCTTGGCCATCCCAAAGTGTACATCAATTTGGACAAACCCGGTGCCCATGCCTGCGGATACTGTGGGCAGCGTTTCGAGAAGATCGATCATCATCACTGAAGCTGCTTGCTTTTTTGCTGTGTGATTAAACAAAACAAACACAAATACGCCCGTCATGCTGCTTCGTTGAACCTTTAGTCAAATAAACGGAGGATATAAAAAC]

[+] EMBL BM628563             [TCCGGACGCGTGGGTGGCGAACGTGGTCAGCACGCGCTCCATCACCACCCAGGTGCTTGCTACGCAGTGCGCCACCATTAAGGACGAAATCACACACACGGGACAGTTCTACGAAGCGAACGACTATCGGAATGCCCGTTTCGTGAACGCTACCAAGGTGGTCAACCCGAACTGGGCCATTAAGCTGATCGACGAGCTGCCAATCGTCAAGTCGGAGCAGCGCGTCGTGTGCTGCGACGGTGGAACCGATCCCGCCCTTGGCCATCCCAAAGTGTACATCAATTTGGACAAACCCGGTGCCCATGCCTGCGGATACTGTGGGCAGCGTTTCGAGAAGATCGATCATCATCACTGAAGCTGCTTGCTTTTTTGCTGTGTGATTAAACAAAACAAACACAAATACGCCCGTCATGCTGCTTCGTTGAACCTTTAGTCAAATAAACGGAGGATATAAAAAC]
[-] EMBL CNS08M98             [                                                                                   ACGAAAT A AAACACGGGACAGTTTTACGAAGCGAACGACTATCGGAATGCCCGTTTCGTGAACGCTACCAAGGTGGTCAACCCGAACTGGGCCATTAAGCTGATCGACGGGCTGCCAATCGTCAAGTCGGAGCAGCGCGTCG GGGGTGCGACGGTGGAACCGATCCCGCCCTTGGCCATCCCAAAGTGTACATCAATTTGGAAAAACCCGGTGCCCATGCCTGCGGATACTGTGGGCAGCGTTTCGAGAAGA                                                                                                                        ]
[+] EMBL BM649463             [                                                                                             ccgCACGGGACAGTTCTACGAAGCGAACGACTATCGGAATGCCCGTTTCGTGAACGCTACCAAGGTGGTCAACCCGAACTGGGCCATTAAGCTGATCGACGAGCTGCCAATCGTCAAGTCGGAGCAGCGCGTCGTGTGCTGCGACGGTGGAACCGATCCCGCCCTTGGCCATCCCAAAGTGTACATCAATTTGGACAAACCCGGTGCCCATGCCTGCGGATACTGTGGGCAGCGTTTCGAGAAGATCGATCATCATCACTGAAGCTGCTTGCTTTTTTGCTGTGTGATTAAACAAAACAAACACAAATACGCCCGTCATGCTGCTTCGTTGAACCTTTAGTCAAATAAACGGAGGATAT      ]


>consensus_9740#2 TCCGGACGCGTGGGTGGCGAACGTGGTCAGCACGCGCTCCATCACCACCCAGGTGCTTGC TACGCAGTGCGCCACCATTAAGGACGAAATCACACACACGGGACAGTTCTACGAAGCGAA CGACTATCGGAATGCCCGTTTCGTGAACGCTACCAAGGTGGTCAACCCGAACTGGGCCAT TAAGCTGATCGACGAGCTGCCAATCGTCAAGTCGGAGCAGCGCGTCGTGTGCTGCGACGG TGGAACCGATCCCGCCCTTGGCCATCCCAAAGTGTACATCAATTTGGACAAACCCGGTGC CCATGCCTGCGGATACTGTGGGCAGCGTTTCGAGAAGATCGATCATCATCACTGAAGCTG CTTGCTTTTTTGCTGTGTGATTAAACAAAACAAACACAAATACGCCCGTCATGCTGCTTC GTTGAACCTTTAGTCAAATAAACGGAGGATATAAAAAC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9740#0      CCGCTGCCAATTTCGCTGCAAGTCGGTGTCGCACGATTGAAATAAAAACAACACAGCTCA 60
consensus_9740#2      ------------------------------------------------------------
consensus_9740#1      -----------------------------------------------------CCGCCCA 7
                                                                                  

consensus_9740#0      GCTCAGCAGCGGAAAAACAAACGCCGGAATGGCCTCACGGATGATTCTTTCGCCCGCCCG 120
consensus_9740#2      ---------------------------------------------------TCCGGACGC 9
consensus_9740#1      CGCGTCCGCCCACGCCCGAAACGCCGGAATGGCCTCACGGATGATTCTTTCGCCCGCCCG 67
                                                                          ** * *  

consensus_9740#0      GCGACTGGCGAGCGTGGTCAGCACGCGCTCCATCACCACCCAGGTGCTTGCTACGCAGTG 180
consensus_9740#2      GTGGGTGGCGAACGTGGTCAGCACGCGCTCCATCACCACCCAGGTGCTTGCTACGCAGTG 69
consensus_9740#1      GCGACTGGCGAGCGTGGTCAGCACGCGCTCCATCACCACCCAGGTGCTTGCTACGCAGTG 127
                      * *  ****** ************************************************

consensus_9740#0      CGCCACCATTAAGGACGAAATCACACACACGGGACAGTTCTACGAAGCGAACGACTATCG 240
consensus_9740#2      CGCCACCATTAAGGACGAAATCACACACACGGGACAGTTCTACGAAGCGAACGACTATCG 129
consensus_9740#1      CGCCACCATTAAGGACGAAATCACACACACGGGACAGTTCTACGAAGCGAACGACTATCG 187
                      ************************************************************

consensus_9740#0      GAATGCCCGTTTCGTGAACGCTACCAAGGTGGTCAACCCGAACTGGGCCATTAAGCTGAT 300
consensus_9740#2      GAATGCCCGTTTCGTGAACGCTACCAAGGTGGTCAACCCGAACTGGGCCATTAAGCTGAT 189
consensus_9740#1      GAATGCCCGTTTCGTGAACGCTACCAAGGTGGTCAACCCGAACTGGGCCATTAAGCTGAT 247
                      ************************************************************

consensus_9740#0      CGACGAGCTGCCAATCGTCAAGTCGGAGCAGCGCGTCGTGTGCTGCGACGGTGGAACCGA 360
consensus_9740#2      CGACGAGCTGCCAATCGTCAAGTCGGAGCAGCGCGTCGTGTGCTGCGACGGTGGAACCGA 249
consensus_9740#1      CGACGAGCTGCCAATCGTCAAGTCGGAGCAGCGCATCGTGTGCTGCGACGGTGGAACCGA 307
                      ********************************** *************************

consensus_9740#0      TCCCGCCCTTGGCCATCCCAAAGTGTACATCAATTTGGACAAACCCGGTGCCCATGCCTG 420
consensus_9740#2      TCCCGCCCTTGGCCATCCCAAAGTGTACATCAATTTGGACAAACCCGGTGCCCATGCCTG 309
consensus_9740#1      TCCCGCCCTTGGCCATCCCAAAGTGTACATCAATTTGGACAAACCCGGTGCCCATGCCTG 367
                      ************************************************************

consensus_9740#0      CGGATACTGTGGGCAGCGTTTCGAGAAGATCGATCATCATCACTGAAGCAGCTTGCTTTT 480
consensus_9740#2      CGGATACTGTGGGCAGCGTTTCGAGAAGATCGATCATCATCACTGAAGCTGCTTGCTTTT 369
consensus_9740#1      CGGATACTGTGGGCAGCGTTTCGAGAAGATCGATCATCATCACTGAAGCAGCTTGCTTTT 427
                      ************************************************* **********

consensus_9740#0      TTGCTGTGTGATCAAACAAAACAAACACAAATACGCCCGTCATGCTGCTTCGTTGAACCT 540
consensus_9740#2      TTGCTGTGTGATTAAACAAAACAAACACAAATACGCCCGTCATGCTGCTTCGTTGAACCT 429
consensus_9740#1      TTGCTGTGTGATCAAACAAAACAAACACAAATACGCCCGTCATGCTGCTTCGTTGAACCT 487
                      ************ ***********************************************

consensus_9740#0      TTAGTCAAATAAACGGAGGATATAAAAACCAAACTAAAAAAAAAAAAAAAAAAAGGCCAC 600
consensus_9740#2      TTAGTCAAATAAACGGAGGATATAAAAAC------------------------------- 458
consensus_9740#1      TTAGTCAAATAAACGGAGGATATAAAAAC------------------------------- 516
                      *****************************                               

consensus_9740#0      ATGTGCTCGAGCTTT 615
consensus_9740#2      ---------------
consensus_9740#1      ---------------
                                     




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)