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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9745#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 18 consensus length = 1250 fasta sequence
[AGTTCTGGCCAGCTTCAGGTAAATGTGGTAATTTGT-GTGGG-GCATGTGAACGAAAATCTAAACTAAAAATATGAGTGGTAAACAGCAACCGAAAATTCTGCTCAAA-AC-TCGGTCCACCGATGATCCTGCAGCGGGCCCTTCCGTATCCACCCCCAG-AAG-AACTCCG-ACCA-TCTTGGCCAGTACCACACCACAGATCGCCGTCACATCCAAGGGGTCCGAATCTAGGCATGCAGCATCCGCTAA-ATCACTGCCGGCAACGGCAGCCCCCCGATCCGTACAGCTACACGCCG-ATGGAGGGGTCCTTGGTGCTGCTGAAGAATCACAATGCGATCAACTATCGCACGCTGGATTTTCTACACGAG-ACCAATCAGGATTA-CGTCGT-AATCGGAACTATCGGTATGCCCGGCGTTGGTAAATCGACCGTGTTAAACTTGCTCAACACAAACCTTTACGCGCCCGATCAAAGCGACAACAGGAAGGAAACTATCTTTCCC-GTGCACAGTACAATTAACGTTGCGGGCGAAAATGAAGTGCGGATGCACATCACCGAGGATCGGTTAATACTGTTGGACTGTAGCGAGCCGGTGTTTGGGCACGCGAGAAAAGACTTCATTCAGAACGAGCAAGACGAGCTGAAGAAGCTGATGATTTTGCTCCGTATTTGTCACGTCATGCTGGTGGTGCAGGAAGAATATTACAACATCCGGCTGATGCGTACCCTGATGTGGGCAGAAATGATGACCCAGGTACATTCCGCCCAGCCCACCAAGCTTGTGTTCATCCGGAACAAGGTAGTGCCGCACGGCACCAG-TCACGATTCCCGCGAACGGATGATCAATCTGTACCGGCAGATGTTTCTTAACGTGGCGTCGTTTTCCGTGACGAGCGCCAGCTTTAGC-GGTGACTCCGGAGCACAGGAGGAAATGTTCAATTATGTAGAATTTCCCCGCATAGAAAA---AGGTGAAACGGTGAGCATTCCGGAACATTTGAAGGAAACCATACTGTCGCTACGGCAGATCGTGTACGCTGGACGGGAAAGTATAATGGCACGCAATTGCTCGGAAAAGGCATGGGGCCAAGCGCTTGTAAAGCTAATCGATTGCCCGGAGGGTAACTTTTTCGTCGACAAGTACGAAAAGCTGA-AGGAAA-AGTACAACCTTCACAATCATGTAAAAATTACGGAAAATCAATATCGCGATCAGACATCGCTACATTTTGTGGAATAAAACTAATGCATCCTCAGAAACCCC]
[+] EMBL CNS08UEP [AGTTCTGGCCAGCTTCAGGTAAATGTGGTAATTTGT GTGGG GCATGTGAACGAAAATCTAAACTAAAAATATGAGTGGTAAACAGCAACCGAAAATTCTGCTCAAA AC TCGGTCCACCGATGATCCTGCAGCGGGCCCTTCCGTATCCACCCCCAG AAG AACTCCA ACCA TCTTGGCCAGTACCACACCACAGATCGCCGGCACA ]
[+] EMBL CNS08CQ5 [ CTGGCCAGCTTCAGGTAAATGTGGTAATTTGT GTGGG GCATGTGAACGAAAATCTAAACTAAAAATATGAGTGGTAAACAGCAACCGAAAATTCTGCTCAAA AC TCGGTCCACCGATGATCCTGCAGCGGGCCCTTCCGTATCCACCCCCAG AAG AACTCCG ACCA TCTTGGCCAGTACCACACCACAGATCGTCGGCACATCCAAGGGGTCCGAATCTAGGCATGCAGCATCCGCTAA ATCACTGCCGGCTACGGCAGCTCCCCGATCCGTACAGCTACACGCCG ATGGAGGGGTCCTTGGTGCTGCTGAAGAATCACAATGCGATCAACTATCGCACGCTGGATTTTCTACACGAG ACCAATCAGGATTA CGTCGT AATCGGAACCATCGGCATGCCCGGCGTTGGTAAATCGACCGTGTTAAACTTGCTCAACACAAACCTTTACGCGCCCGATCAAAGCGACAACAGGAAGGAAACTATCTTTCCC GTGCACAGTACAATTAACGTTGCGGGCGAAAATGAAGTGCGGATGC CATCACCGAGGATCGGTTAATACTGTTGGACTGTAGCGAGCCGGTGTTTGGGCACGCGAGAAAAGACTTCATTCAGAACTTTCAAGACGAGCTGAAGAAGCTGATGATTTTGCTCCGTATTTGTCACGTCATGCTGGTGGTGCAGGAAGAATATTACAACATCCGGCTGATGCGTACCCTGATGTGGGCAGAAATGATGACCCAGGTACATTCCGCCCAGCCCACCAAGCTTGTGTTCATCCGGAACAAGGTAGTGCCACACGGCACCAG TCACGATTCCCGCGAACGGATGATCAATCTGTACCGGCAGATGTTTCTTAACGTGGCGTCGTTTTCCGTGACGAGCGCCACTTTTAGC GGTGACTCCGGAGCACAGGAGGAAATGTTCAATTATGTAGAATTTCCTCGCATAGAAAA AGGTGAACGGGTGA ]
[+] EMBL CNS08HT9 [ aaaaaGGCCAGCTTCAGGTAAATGTGGTAATTTGT GTGGG GCATGTGAACGAAAATCTAAACTAAAAATATGAGTGGTAAACAGCAACCGAAAATTCTGCTCAAACAC TCGGTCCACCGATGATCCTGCAGCGGGCCCTTCCGTATCCACCCCCAG AAG AACTCCA ACCA TCTTGGCCAGTACCACACCACAGATCGCCGGCACATCCAAGGGGTCCGAATCTAGACATGCAGCATCCGCTAA ATCACTGCCGGCTACGGCA CCCCCCGATCCGTACAGCTACACGCCG ATGGAGGGGTCCTTGGTGCTGCTGAAGAATCACAATGCGATCAACTATCGCACGCTGGATTTTCTACACGAG ACCAATCAGGATTA CGTCGT AATCGGAACTATCGGCATGCCCGGCGTTGGTAAATCGACCGTGTTAAACTTGCTCAATACAAATCTTTACGCGCCCGATCAAAGCGACAACAAAAAGGAAAGCATCTTTCCC GTGCACAGTACAATTAACGTTGCGGGCGAAAATGAAGTGCGGATGCACATCACCGAGGATCGGTTAATACTGTTGGACTGTAGCGAGCCGGTGTTTGGGCACGCGAGAAAAGACTTCATTCAGAACGAGCAAGACGAGCTGAAGAAGCTGATGATTTTGCTCCGTATTTGTCACGTCATTCTGGTGGTGCAGGAAGAATATTACAACATCCGGCTGATGCGTACCCTGATGTGGGCAGAAATGATGACCCAGGTACATTCCGCCCAGCCCACCAAGCTTGTGTTCATCCGGAACAAGGTAGTGCCGCACGGCACATG TCACGATTCCCGCGAACGGATGATCAATCTGTACCGGCAGATGGTTCTTAACGTGGCGTCGTTTTCCGTGACGTGCGCCACTTTTAGC GGTGACTCCGGAGCACAGGAGGAAATGTTCAATTATGTA ]
[+] EMBL CNS09O2V [ GTAAATGTGGTAATTTGT GTGGG GCATGTGAACGAAAATCTAAACTAAAAATATGAGTGGTAAACAGCAACCGAAAATTCTGCTCAAA AC TCGATCCACCGATGATCCTGCAGCGGGCCCTTCCGTATCCACCCCCAG AAG AACTCCG ACCA TCTTGGCCAGTACCACACCACAGATCGCCGTCACATCCAAGGGGTCCGAATCTAGGCATGCAGCATCCGCTAA ATCACTGCCGGCAACGGCA CCCCCCGATCCGTACAGCTACACGCCG ATGGAGGGGTCCTTGGTGCTGCTGAAGAATCACAATGCGATCAACTATCGCACGCTGGATTTTCTACACGAG ACCAATCAGGATTA CGTCGT AATCGGAACTATCGGTATGCCCGGCGTTGGTAAATCGACCGTGTTAAACTTGCTCAACACAAACCTTTACGCGCCCGATCAAAGCGACAACAGGAAGGAAACTATCTTTCCC GTGCACAGTACACTTAACGTTGCGGGCGAAAATGAAGTGCGGATG AAATCACCGAGGATCGGTTAATACTGTTGGACTGTAGCGAGCCGGTGTTTGGGC ]
[+] EMBL CNS09KBF [ AAATGTGGTAATTTGT GTGGGAGCATGTGAACGAAAATCTAAACTAAAAATATGAGTGGTAAACAGCAACCGAAAATTCTGCTCAAA AC TCGATCCACCGATGATCCTGCAGCGGGCCCTTCCGTATCCACCCCCAG AAG AACTCCG ACCA TCTTGGCCAGTACCACACCACAGATCGCCGTCACATCCAAGGGGTCCGAATCTAGGCATGCAGCATCCGCTAA ATCACTGCCGGCAACGGCAGCTCCCCGATCCGTACAGCTACACGCCG ATGGAGGGGTCCTTGGTGCTGCTGAAGAATCACAATGCGATCAACTATCGCACGCTGGATTTTCTACACGAG ACCAATCAGGATTA CGTCGT AATCGGAACTATCGGTATGCCCGGCGTTGGTAAATCGACCGTGTTAAACTTGCTCAACCCAAACCTTTACGCGCCCGATCAAAGCGACAACAGGAAGGAAACTATCTTTCCC GTGCACAGTACACTTAACGTTGCGGGCGAAAATGAAGTGCGGATGCACATCACCGAGGATCGGTTAATACTGTTGGACTGTAGCGAGCCGGTGTTTGGGCACGCGAGAAAAGACTTCATTCAGAACGAGCAAGACGAGCTGAAGAAGCTGATGATTTTGCTCCGTATTTGTCACGTCATGCTGGTGGTGCAGGAAGAATATTACAACATCCGGCTGATGCGTACCCTGATGTGGGCAGAAATGATGACCCAGGTACATTCCGCCCAGCCCACCAAGCTTGTGTTCATCCGGAACAAGGTAGTGCCGCACGGCACCAGTTCACGATTCCCGCGAACGGATGATCAATCTGTACCGGCAGATGTTTCTTAACGTGGCGTCGTTTTCCGTGACGAGCGCCACTTTTAGCGGGTGACTCCGGAGCACAGGAGGAAATGTTCAATTATGTAGAATTTCCCCGCATAGAAAA AGGTGAAACGGTGAGCATTCCGGAACATTTGAAGGAAACCATACTGTCGCTACGGCAGATCGTGTACGCTGGACGGGAAAGTATAAT ]
[+] EMBL CNS0975K [ TGGTAATTTGTGGTGGG GCATGTGAACGAAAATCTAAACTAAAAATATGAGTGGTAAACAGCAACCGAAAATACTGCTCAAA AC TCGATCCACCGATGATCCTGCAGCGGGCCCTTCCGTATCCACCCCCAG AAG AACTCCG ACCACTCTTGGCCAGTACCACACCACAGATCGCCGTCACATCCAAGGGGTCCGAATCTAGGCATGCAGCATCCGCTAA ATCACTGCCGGCAACGGCAGCACCCCGATCCGTACAGCTACACGCCG ATGGAGGGGTCCTTGGTGCTGCTGAAGAATCACAATGCGATCAACTATCGCACGCTGGATTTTCTACACGAG ACCAATCAGGATTA CGTCGT AATCGGAA TTTCGGTATGCCCGGCGTTGGTAAATCGACCGTGTTAAACTTGCTCAACACAAACCTTTACGCGCCCGATCAAAGCGACAACAGGAAGGAAACTATCTTTCCCTGTGCACAGTACACTTAACGTTGCGGGCGAAAATGAAGTGCGGATGCACATCACCGAGGATCGGTTACTACTGTTGGACTGTAGCGAGCCGGTGTTTG ]
[+] EMBL CNS08PBA [ aGGTAATTTGT GTGGG GCATGTGAACGAAAATCTAAACTAAAAATATGAGTGGTAAACAGCAACCGAAAATTCTGCTCAAA AC TCGGTCCACCGATGATCCTGCAGCGGGCCCTTCCGTATCCACCCCCAG AAG AACTCCG ACCA TCTTGGCCAGTACCACACCACAGATCGTCGGCACATCCAAGGGGTCCGAATCTAAGCATGCAGCATCCGCTAA ATCACTGCCGGCTACGGCAG CCCCCGATCCGTACAGCTACACGCCG ATGGAGGGGTCCTTGGTGCTGCTGAAGAATCACAATGCGATCAACTATCGCACGCTGGATTTTCTACACGAG ACCAATCAGGATTA CGTCGT AATCGGAACCATCGGCATGCCCGGCGTTGGTAAATCGACCGTGTTAAACTTGCTCAACACAAACCTTTACGCGCCCGATCAAAGCGACAACAGGAAGGAAACTATCTTTCCC GTGCACAGTACAATTAACGTTGCGGGCGAAAATGAAGTGCGGATGCACATCACCGAGGATCGGTTAATACTGTTGGACTGTAGCGAGCCGGTGTTTGGGCACGCGAGAAAAGACTTCATTCAGAACGAGCAAGACGAGCTGAAGAAGCTGATGATTTTGCTCCGTATTTGTCACGTCATGCTGGTGGTGCAGGAAGAATATTACAACATCCGGCTGATGCGTACCCTGATGTGGGCAGAAATGATGACCCAGGTACATTCCGCCCAGCCCACCAAGCTTGTGTTCATCCGGAACAAGGTAGTGCCACACGGCACCAG TCACGATTCCCGCGAACGGATGATTAATCTGTACCGGCAGATGTTTCTTAACGTGGCGTCGTTTTCCGTGACGAGCGCCAGTTTTAGC GGTGACTCCGGAGC ]
[+] EMBL CNS09HP6 [ GTGGG GCATGTGAACGAAAATCTAAACTAAAAATATGAGTGGTAAACAGCAACCGAAAATTCTGCTCAAA AC TCGATCCACCGATGATCCTGCAGCGGGCCCTTCCGTATCCACCCCCAG AAG AACTCCG ACCA TCTTGGCCAGTACCACACCACAGATCGCCGTCACATCCAAGGGGTCCGAATCTAGGCATGCAGCATCCGCTAA ATCACTGCCGGCAACGGCA CTCCCCGATCCGTACAGCTACACGCCG GTGGAGGGGTCCTTGGTGCTGCTGAAGAATCACAATGCGATCAACTATCGCACGCTGGATTTTCTACACGAG ACCAATCAGGATTA CGTCGT AATCGGAACTATCGGTATGCCCGGCGTTGGTAAATCGACCGTGTTAAACTTGCTCAACACAAACCTTTACGCGCCCGATCAAAGCGACAACAGGAAGGAAACTATCTTTCCC GTGCACAGTACACTTAACGTTGCGGGCGAAAATGAAGTGCGGATGC CATCACCGAGGATCGGTTAATACTGTTGGACTGTAGCGAGCCGGTGTTTGGGCACGCGAGAAAAGACTTCATTCAGAACGAGCAAGACGAGCTGAAGAAGCTGATGATTTTGCTCCGTATTTGTCACGTCATGCTGGTGGTGCAGGAAGAATATTACAACATCCGGCTGATTCTTACCCTTATTTTTTCATAAA ]
[+] EMBL BX619350 [ GAAAATTCTGCTCAAA ACGTCGGTCCACCGATGATCCTGCAGCGGGCCCTTCCGTATCCACCCCCAGNAAGAAACTCCGNACCA TCTTGGCCAGTACCACACCACAGATCGCCGTCACATCCAAGGGGTCCGAATCTAGGCATGCAGCATCCGCTAANATCACTGCCGGCAACGGCAGCCCCCGGATCCGTACAGCTACACGCCGNATGGNGGGGTCCTTGGTGCTGCTGAAGAATCACAATGCGATCAACTATCGCACGCTGGATTTTCTACACGAGAACCAATCAGGATTANCGTCGTNAATCGGAACTATCGGTATGCCCGGCGTTGGTAAAT ]
[-] EMBL CNS09KBG [ AACGGCAG CCCCCGATCCGTACAGCTACACGCCG ATGGAGGGGTCCTTGGTGCTGCTGAAGAATCACAATGCGATCAACTATCGCACGCTGGATTTTCTACACGAG ACCAATCAGGATTA CGTCGT AATCGGAACTATCGGTATGCCCGGCGTTGGTAAATCGACCGTGTTAAACTTGCTCAACCCAAACCTTTACGCGCCCGATCAAAGCGACAACAGGAAGGAAACTATCTTTCCC GTGCACAGTACACTTAACGTTGCGGGCGAAAATGAAGTGCGGATGCACATCACCGAGGATCGGTTAATACTGTTGGACTGTAGCGAGCCGGTGTTTGGGCACGCGAGAAAAGACTTCATTCAGAACGAGCAAGACGAGCTGAAGAAGCTGATGATTTTGCTCCGTATTTGTCACGTCATGCTGGTGGTGCAGGAAGAATATTACAACATCCGGCTGATGCGTACCCTGATGTGGGCAGAAATGATGACCCAGGTACATTCCGCCCAGCCCACCAAGCTTGTGTTCATCCGGAACAAGGTAGTGCCGCACGGCACCAG TCACGATTCCCGCGAACGGATGATCAATCTGTACCGGCAGATGTTTCTTAACGTGGCGTCGTTTTCCGTGACGAGCGCCAGCTTTAGC GGTGACTCCGGAGCACAGGAGGAAATGTTCAATTATGTAGAATTTCCCCGCATAGAAAA AGGTGAAACGGTGAGCATTCCGGAACATTTGAAGGAAACCATACTGTCGCTACGGCAGATCGTGTACGCTGGACGGGAAAGTATAATGGCACGCAATTGCTCGGAAAAGGCATGGGGCCAAGCGCTTGTAAAGCTAATCGATTGCCCGGAGGGTAACTTTTTCGTCGACAAGTACGAAAAGCTGA AGGAAA AGTACAACCTTCACAATCATGTAAAAATTACGGAAAATCAATATCGCGATCAGACATCGCTACATTTTGTGGAATAAAACTAAT ]
[-] EMBL CNS08HTA [ TGGAGGGGTCCTTGGTGCTGCTGAAGAATCACAATGCGATCAACTATCGCACGCTGGATTTTCTACACGAG ACCAATCAGGATTA CGTCGT AATCGGAACTATCGGCATGCCCGGCGTTGGTAAATCGACCGTGTTAAACTTGCTCAATACAAATCTTTACGCGCCCGATCAAAGCGACAACAAAAAGGAAAGCATCTTTCCC GTGCACAGTACAATTAACGTTGCGGGCGAAAATGAAGTGCGGATGCACATCACCGAGGATCGGTTAATACTGTTGGACTGTAGCGAGCCGGTGTTTGGGCACGCGAGAAAAGACTTCATTCAGAACGAGCAAGACGAGCTGAAGAAGCTGATGATTTTGCTCCGTATTTGTCACGTCATTCTGGTGGTGCAGGAAGAATATTACAACATCCGGCTGATGCGTACCCTGATGTGGGCAGAAATGATGACCCAGGTACATTCCGCCCAGCCCACCAAGCTTGTGTTCATCCGGAACAAGGTAGTGCCGCACGGCACCAG TCACGATTCCCGCGAACGGATGATCAATCTGTACCGGCAGATGGTTCTTAACGTGGCGTCGTTTTCCGTGACGTGCGCCAGCTTTAGC GGTGACTCCGGAGCACAGGAGGAAATGTTCAATTATGTAGAATTTCCTCGCATAGAAAAAGCAGGTGAAACGGTGAGCATTCCGGAACATTTGAAGGAAACCATACTGTCGCTACGGCAGATCGTGTACGCTGGACGGGAAAGTATAATGGCACGCAATTGCTCGGAAAAGGCATGGGGCCAAGCGCTTGTAAAGCTAATCGATTGCCCGGAGGGTAACTTTTTCGTCGACAAGTATGAAAAGCTGA AGGAAA AGTACAACCTTCACAATCATGTAAAAATTACGGAAAATCAATATCGTGATCAGACATCGCTACATTTTGTAGAATAAAACTAATGCATCCTtttt ]
[-] EMBL CNS08CQ6 [ TTCTAAACGAG ACAAATAAGGATTA CGTCGT AATCGGAACCATCGGCATGCCCGGCGTTGGTAAATCGACCGTGTTATACTTGCTCAACACAAACCTTTACGCGCCCGATCAAAGCGACAACAGGAAGGAAACTATTTTTCCC GTGCACAGTACAATTAACGTTGCGGGCGAAAATGAAGTGCGGATGCACATCACCGAGGATCGGTTAATACTGTTGGACTGTAGCGAGCCGGTGTTTGGGCACGCGAGAAAAGACTTCATTCAGAACGAAAAAGACGAGCTGAAGAAGCTGATGATTTTGCTCCGTATTTGTCACGTCATGCTGGTGGTGCAGGAAGAATATTACAACATCCGGCTGATGCGTACCCTGATGTGGGCAGAAATGATGACCCAGGTACATTCCGCCCAGCCCACCAAGCTTGTGTTCATCCGGAACAAGGTAGTGCCACACGGCACAAG TCACGATTCCCGCGAACGGATGATCAATCTGTACCGGCAGATGTTTCTTAACGTGGCGTCGTTTTCCGTGACGAGCGCCAGCTTTAGC GGTGACTCCGGAGCACAGGAGGAAATGTTCAATTATGTAGAATTTCCTCGCATAGAAAA AGGTGAAACGGTGAACATTCCGGAACATTTGAAGGAAACCATACTGTCGCTACGGCAGATCGTGTACGGTGGACGGGAAAGTATAATGGCACGCAATTGCTCGGAAAAGGCATGGGGCCAAGCGCTTGTAAAACTAATCGATTGCCCGGAGGGTAACTTTTTCGTCGACAAGTATGAAAAGCTGA AGGAAA AGTACAACCTTCACAATCATGTAAAAATTACGGAAAATCAATATCGTGATCAGACATCGCTACATTTTGTAGAATAAAACTAATGCATCC ]
[+] EMBL BX626821 [ TTGCTCAATACAAATCTTTACGCGCCCGATCAAAGCGACAACAAAAAGGAAAGCATCTTTCCC GTGCACAGTACAATTAACGTTGCGGGCGAAAATGAAGTGCGGATGCACATCACCGAGGATCGGTTAATACTGTTGGACTGTAGCGAGCCGGTGTTTGGGCACGCGAGAAAAGACTTCATTCAGAACGAGCAAGACGAGCTGAAGAAGCTGATGATTTTGCTCCGTATTTGTCACGTCATTCTGGTGGTGCAGGAAGAATATTACAACATCCGGCTGATGCGTACCCTGATGTGGGCAGAAATGATGACCCAGGTACATTCCGCCCAGCCCACCAAGCTTGTGTTCATCCGGAACAAGGTAGTGCCGCACGGCACCAG TCACGATTCCCGCGAACGGATGATCAATCTGTACCGGCAGATGGTTCTTAACGTGGCGTCGTTTTCCGTGACGTGCGCCAGCTTTAGC GGTGACTCCGGAGCACAGGAGGAAATGTTCAATTATGTAGAATTTCCTCGCATAGAAAA AGGTGAAACGGTGAGCATTCCGGAACATTTGAAGGAAACCATACTGTCGCTACNGCAGATCGTGTACGCTGGACGGGAAAGTATAATGGCACGCNATTGCTCGGAAAAGGCATGGGGCCNAGCGCTTGTAAAGCTAATCGATT ]
[-] EMBL CNS09O2W [ CATCACCGAGGATCGGTTAATACTTTTGTACTGTAGCGAGCCGGTGTTTGGGCACGCGAGAAAAGACTTCATTCAGAACGAGCAAGACGAGCTGAAGAAGCTGATGATTTTGCTCCGTATTTGTCACGTCATGCTGGTGGTGCAGGAAGAATATTACAACATCCGGCTGATGCGTACCCTGATGTGGGCAGAAATGATGACCCAGGTACATTCCGCCCAGCCCACCAAGCTTGTGTTCATCCGGAACAAGGTAGTGCCGCACGGCACCAG TCACGATTCCCGCGAACGGATGATCAATCTGTACCGGCAGATGTTTCTTAACGTGGCGTCGTTTTCCGTGACGAGCGCCAGCTTTAGC GGTGACTCCGGAGCACAGGAGGAAATGTTCAATTATGTAGAATTTCCCCGCATAGAAAA AGGTGAAACGGTGAGCATTCCGGAACATTTGAAGGAAACCATACTGTCGCTACGGCAGATCGTGTACGCTGGACGGGAAAGTATAATGGCACGCAATTGCTCGGAAAAGGCATGGGGCCAAGCGCTTGTAAAGCTAATCGATTGCCCGGAGGGTAACTTTTTCGTCGGCAAGTACGAAAAGCTGAGAGGAAAGAGTACAACCTTCACAATCATGTAAAAATTACGGAAAATCAATATCGCGATCAGACATCGCTACATTTTGTGGAATAA ]
[+] EMBL BX622485 [ AGGATCGGTTAATACTGTTGGACTGTAGCGAGCCGGTGTTTGGGCACGCGAGAAAAGACTTCATTCAGAACGAGCAAGACGAGCTGAAGAAGCTGATGATTTTGCTCCGTATTTGTCACGTCATGCTGGTGGTGCAGGAAGAATATTACAACATCCGGCTGATGCGTACCCTGATGTGGGCAGAAATGATGACCCAGGTACATTCCGCCCAGCCCACCAAGCTTGTGTTCATCCGGAACAAGGTAGTGCCGCACGGCACCAG TCACGATTCCCGCGAACGGATGATCAATCTGTACCGGCAGATGTTTCTTAACGTGGCGTCGTTTTCCGTGACGAGCGCCAGCTTTAGC GGTGACTCCGGAGCACAGGAGGAAATGTTCAATTATGTAGAATTTCCCCGCATAGAAAA AGGTGAAACGGTGAGCATTCCGGAACATTTGAAGGAAACCATACTGTCGCTACGGCAGATCGTGTACGCTGGACGGGAAAGTATAATGGCACGCAATTGCTCGGAAAAGGCATGGGGCCAAGCGCTTGTAAAGCTAATCGATTGCCCGGAGGGTAACTTTTTCGTCGACAAGTACGAAAAGCTGA AGGAAA AGTACAACCTTCACAATCATGTAAAAATTACGGAAAATCAATATCGCGATCAGACATCGCTACATTTTGTGGAATAAAACTAATGCATCCTCAGAAA ]
[-] EMBL CNS09HP7 [ AAAGAGAAAGAAGAGATGAAGAAGCTGATGATTTTGCTCCGTATTTGTCACGTCATGCTGGTGGTGCAGGAAGAATATTACAACATCCGGCTGATGCGTACCCTGATGTGGGCAGAAATGATGACCCAGGTACATTCCGCCCAGCCCACCAAGCTTGTGTTCATCCGGAACAAGGTAGTGCCGCACGGCACCAG TCACGATTCCCGCGAACGGATGATCAATCTGTACCGGCAGATGTTTCTTAACGTGGCGTCGTTTTCCGTGACGAGCGCCAGCTTTAGC GGTGACTCCGGAGCACAGGAGGAAATGTTCAATTATGTAGAATTTCCCCGCATAGAAAA AGGTGAAACGGTGAGCATTCCGGAACATTTGAAGGAAACCATACTGTCGCTACGGCAGATCGTGTACGCTGGACGGGAAAGTATAATGGCACGCAATTGCTCGGAAAAGGCATGGGGCCAAGCGCTTGTAAAGCTAATCGATTGCCCGGAGGGTAACTTTTTCGTCGACAAGTACGAAAAGCTGA AGGAAA AGTACAACCTTCACAATCATGTAAAAATTACGGAAAATCAATATCGCGATCAGACATCGC ]
[-] EMBL CNS0975L [ GTAGTGCCGCACGGCACCAG TCACGATTCCCGCGAACGGATGATCAATCTGTACCGGCAGATGTTT ATAACGTGGCGTCGTTTTCCGTGACGAGCGCCAGCTTTAGC GGTGACTCCGGAGCACAGGAGGAAATGTTCAATTATGTAGAATTTCCCCGCATAGAAAA AGGTGAAACGGTGAGCATTCCGGAACATTTGAAGGAAACCATACTGTCGCTACGGCAGATCGTGTACGCTGGACGGGAAAGTATAATGGCACGCAATTGCTCGGAAAAGGCATGGGGCCAAGCGCTTGTAAAGCTAATCGATTGCCCGGAGGGTAACTTTTTCGTCGACAAGTACGAAAAGCTGA AGGAAA AGTACAACCTTCACAATCATGTAAAAATTACGGAAAATCAATATCGCGATCAGACATCGCTACATTTTGTGGAATAAAAATAATcaata ]
[-] EMBL CNS08UEQ [ tATGGCACGCAATTGCTCGGAAAAGGCATGGGGCCAAGCGCTTGTAAAGCTAATCGATTGCCCGGAGGGTAACTTTTTCGTCGACAAGTATGAAAAGCTGA AGGAAA AGTACAACCTTCACAATCATGTAAAAATTACGGAAAATCAATATCGTGATCAGACATCGCTACATTTTGTAGAATAAAACTAATGCATCCTCAAAAACCCC]
consensusID : consensus_9745#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 993 fasta sequence
[CCAAGAATCGGCACGAGGCAGATCGCCGTCACATCCAATGGGTCCGAATCTAGGCATGCAGCATCCGCTAAATCACTGCCGGCAACGGCAGCCCCCGATCCGTACAGCTACACGCCGATGAGGGGTCCTTGGTGCTGCTGAAGAATCACAATGCGATCAACTATCGCACGCTGGATTTTCTACACGAGACCAATCAGGATTACGTCGTAATCGGAACTATCGGTATGCCCGGCGTTGGTAAATCGACCGTGTTAAACTTGCTCAACACAAACCTTTACGCGCCCGATCAAAGCGACAACAGGAAGGAAACTATCTTTCCCGTGCACAGTACACTTAACGTTGCGGGCGAAAATGAAGTGCGGATGCACATCACCGAGGATCGGTTAATACTGTTGGACTGTAGCGAGCCGGTGTTTGGGCACGCGAGAAAAGACTTCATTCAGAACGAGCAAGACGAGCTGAAGAAGGCTGATGATTTTGCTCCGTATTTGTCACGTCATGCTGGTGGTGCAGGAAGAATATTACAACATCCGGGCTGATGCGTACCCTGATGTGGGCACGAAAACTGATNGACCCCAGTTACAATTCCGGGCCAAGGCCACCAAGGCTTGNTGGTTTCCATNCCGGGAACAAGGGTNAGTTGCCCGCCANCGGCAACCAGTCACCGAATTCCCGGGGAAACGGATGATCAATCTGGTACCGGGCGGGATGTTTCTTAACGTTGACGTTCGGTTTTCCCGTGACGAAGCGCCCAAGGCTTTTANTCCGGTTGAACTTCCCGGAGAGGCACACAGGGAGGCGCAAATTGTTTCACACTTTGATNTAAGCAAATNTTTCCCCCCGGGTTTAGAAACAAGGGNTGACAACCGGTTNAAGGCATTTCCCGGGGAACATTTTAACAGGGGACANGACCCATACATTGGTCGAGCTTAACCGGGCNNATCNNGTTACCGCCTTGGNACGGGGANAGTTTAATGGGGCCGGCCAGTTGTC]
[+] EMBL BX467349 [CCAAGAATCGGCACGAGGCAGATCGCCGTCACATCCAATGGGTCCGAATCTAGGCATGCAGCATCCGCTAAATCACTGCCGGCAACGGCAGCCCCCGATCCGTACAGCTACACGCCGATGAGGGGTCCTTGGTGCTGCTGAAGAATCACAATGCGATCAACTATCGCACGCTGGATTTTCTACACGAGACCAATCAGGATTACGTCGTAATCGGAACTATCGGTATGCCCGGCGTTGGTAAATCGACCGTGTTAAACTTGCTCAACACAAACCTTTACGCGCCCGATCAAAGCGACAACAGGAAGGAAACTATCTTTCCCGTGCACAGTACACTTAACGTTGCGGGCGAAAATGAAGTGCGGATGCACATCACCGAGGATCGGTTAATACTGTTGGACTGTAGCGAGCCGGTGTTTGGGCACGCGAGAAAAGACTTCATTCAGAACGAGCAAGACGAGCTGAAGAAGGCTGATGATTTTGCTCCGTATTTGTCACGTCATGCTGGTGGTGCAGGAAGAATATTACAACATCCGGGCTGATGCGTACCCTGATGTGGGCACGAAAACTGATNGACCCCAGTTACAATTCCGGGCCAAGGCCACCAAGGCTTGNTGGTTTCCATNCCGGGAACAAGGGTNAGTTGCCCGCCANCGGCAACCAGTCACCGAATTCCCGGGGAAACGGATGATCAATCTGGTACCGGGCGGGATGTTTCTTAACGTTGACGTTCGGTTTTCCCGTGACGAAGCGCCCAAGGCTTTTANTCCGGTTGAACTTCCCGGAGAGGCACACAGGGAGGCGCAAATTGTTTCACACTTTGATNTAAGCAAATNTTTCCCCCCGGGTTTAGAAACAAGGGNTGACAACCGGTTNAAGGCATTTCCCGGGGAACATTTTAACAGGGGACANGACCCATACATTGGTCGAGCTTAACCGGGCNNATCNNGTTACCGCCTTGGNACGGGGANAGTTTAATGGGGCCGGCCAGTTGTC]
consensusID : consensus_9745#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 612 fasta sequence
[CCGCCCACGCGTCCGAAACAGCAACCGAAAATTCTGCTCAAAACTCGGTCCACCGATGATCCTGCAGCGGGCCCTTCCGTATCCACCCCCAGAAGAACTCCGACCATCTTGGCCAGTACCACACCACAGATCGCCGTCACATCCAAGGGGTCCGAATCTAGGCATGCAGCATCCGCTAAATCACTGCCGGCAACGGCAGCCCCCGATCCGTACAGCTACACGCCGATGGAGGGGTCCTTGGTGCTGCTGAAGAATCACAATGCGATCAACTATCGCACGCTGGATTTTCTACACGAGACCAATCAGGATTACGTCGTAATCGGAACTATCGGTATGCCCGGCGTTGGTAAATCGACCGTGTTAAACTTGCTCAACACAAACCTTTACGCGCCCGATCAAAGCGACAACAGGAAGGAAACTATCTTTCCCGTGCACAGTACACTTAACGTTGCGGGCGAAAATGAAGTGCGGATGCACATCACCGAGGATCGGTTAATACTGTTGGACTGTAGCGAGCCGGTGTTTGGGCACGCGAGAAAAGACTTCATTCAGAACGAGCAAGACGAGCTGAAGAAGCTGATGATTTTGCTCCGTATTTGTCACGTCATGCTG]
[+] EMBL BM582172 [CCGCCCACGCGTCCGAAACAGCAACCGAAAATTCTGCTCAAAACTCGGTCCACCGATGATCCTGCAGCGGGCCCTTCCGTATCCACCCCCAGAAGAACTCCGACCATCTTGGCCAGTACCACACCACAGATCGCCGTCACATCCAAGGGGTCCGAATCTAGGCATGCAGCATCCGCTAAATCACTGCCGGCAACGGCAGCCCCCGATCCGTACAGCTACACGCCGATGGAGGGGTCCTTGGTGCTGCTGAAGAATCACAATGCGATCAACTATCGCACGCTGGATTTTCTACACGAGACCAATCAGGATTACGTCGTAATCGGAACTATCGGTATGCCCGGCGTTGGTAAATCGACCGTGTTAAACTTGCTCAACACAAACCTTTACGCGCCCGATCAAAGCGACAACAGGAAGGAAACTATCTTTCCCGTGCACAGTACACTTAACGTTGCGGGCGAAAATGAAGTGCGGATGCACATCACCGAGGATCGGTTAATACTGTTGGACTGTAGCGAGCCGGTGTTTGGGCACGCGAGAAAAGACTTCATTCAGAACGAGCAAGACGAGCTGAAGAAGCTGATGATTTTGCTCCGTATTTGTCACGTCATGCTG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9745#0 AGTTCTGGCCAGCTTCAGGTAAATGTGGTAATTTGTGTGGGGCATGTGAACGAAAATCTA 60
consensus_9745#2 ------------------------------------------------------------
consensus_9745#1 ------------------------------------------------------------
consensus_9745#0 AACTAAAAATATGAGTGGTAAACAGCAACCGAAAATTCTGCTCAAAACTCGGTCCACCGA 120
consensus_9745#2 ----CCGCCCACGCGTCCGAAACAGCAACCGAAAATTCTGCTCAAAACTCGGTCCACCGA 56
consensus_9745#1 ------------------------------------------------------------
consensus_9745#0 TGATCCTGCAGCGGGCCCTTCCGTATCCACCCCCAGAAGAACTCCGACCATCTTGGCCAG 180
consensus_9745#2 TGATCCTGCAGCGGGCCCTTCCGTATCCACCCCCAGAAGAACTCCGACCATCTTGGCCAG 116
consensus_9745#1 ----------------------------------------------------CCAAGAAT 8
*
consensus_9745#0 TACCACACCACAGATCGCCGTCACATCCAAGGGGTCCGAATCTAGGCATGCAGCATCCGC 240
consensus_9745#2 TACCACACCACAGATCGCCGTCACATCCAAGGGGTCCGAATCTAGGCATGCAGCATCCGC 176
consensus_9745#1 CGGCACGAGGCAGATCGCCGTCACATCCAATGGGTCCGAATCTAGGCATGCAGCATCCGC 68
*** ******************** *****************************
consensus_9745#0 TAAATCACTGCCGGCAACGGCAGCCCCCCGATCCGTACAGCTACACGCCGATGGAGGGGT 300
consensus_9745#2 TAAATCACTGCCGGCAACGGCAGCCCCC-GATCCGTACAGCTACACGCCGATGGAGGGGT 235
consensus_9745#1 TAAATCACTGCCGGCAACGGCAGCCCCC-GATCCGTACAGCTACACGCCGATG-AGGGGT 126
**************************** ************************ ******
consensus_9745#0 CCTTGGTGCTGCTGAAGAATCACAATGCGATCAACTATCGCACGCTGGATTTTCTACACG 360
consensus_9745#2 CCTTGGTGCTGCTGAAGAATCACAATGCGATCAACTATCGCACGCTGGATTTTCTACACG 295
consensus_9745#1 CCTTGGTGCTGCTGAAGAATCACAATGCGATCAACTATCGCACGCTGGATTTTCTACACG 186
************************************************************
consensus_9745#0 AGACCAATCAGGATTACGTCGTAATCGGAACTATCGGTATGCCCGGCGTTGGTAAATCGA 420
consensus_9745#2 AGACCAATCAGGATTACGTCGTAATCGGAACTATCGGTATGCCCGGCGTTGGTAAATCGA 355
consensus_9745#1 AGACCAATCAGGATTACGTCGTAATCGGAACTATCGGTATGCCCGGCGTTGGTAAATCGA 246
************************************************************
consensus_9745#0 CCGTGTTAAACTTGCTCAACACAAACCTTTACGCGCCCGATCAAAGCGACAACAGGAAGG 480
consensus_9745#2 CCGTGTTAAACTTGCTCAACACAAACCTTTACGCGCCCGATCAAAGCGACAACAGGAAGG 415
consensus_9745#1 CCGTGTTAAACTTGCTCAACACAAACCTTTACGCGCCCGATCAAAGCGACAACAGGAAGG 306
************************************************************
consensus_9745#0 AAACTATCTTTCCCGTGCACAGTACAATTAACGTTGCGGGCGAAAATGAAGTGCGGATGC 540
consensus_9745#2 AAACTATCTTTCCCGTGCACAGTACACTTAACGTTGCGGGCGAAAATGAAGTGCGGATGC 475
consensus_9745#1 AAACTATCTTTCCCGTGCACAGTACACTTAACGTTGCGGGCGAAAATGAAGTGCGGATGC 366
************************** *********************************
consensus_9745#0 ACATCACCGAGGATCGGTTAATACTGTTGGACTGTAGCGAGCCGGTGTTTGGGCACGCGA 600
consensus_9745#2 ACATCACCGAGGATCGGTTAATACTGTTGGACTGTAGCGAGCCGGTGTTTGGGCACGCGA 535
consensus_9745#1 ACATCACCGAGGATCGGTTAATACTGTTGGACTGTAGCGAGCCGGTGTTTGGGCACGCGA 426
************************************************************
consensus_9745#0 GAAAAGACTTCATTCAGAACGAGCAAGACGAGCTGAAGAAG-CTGATGATTTTGCTCCGT 659
consensus_9745#2 GAAAAGACTTCATTCAGAACGAGCAAGACGAGCTGAAGAAG-CTGATGATTTTGCTCCGT 594
consensus_9745#1 GAAAAGACTTCATTCAGAACGAGCAAGACGAGCTGAAGAAGGCTGATGATTTTGCTCCGT 486
***************************************** ******************
consensus_9745#0 ATTTGTCACGTCATGCTGGTGGTGCAGGAAGAATATTACAACATCCGG-CTGATGCGTAC 718
consensus_9745#2 ATTTGTCACGTCATGCTG------------------------------------------ 612
consensus_9745#1 ATTTGTCACGTCATGCTGGTGGTGCAGGAAGAATATTACAACATCCGGGCTGATGCGTAC 546
******************
consensus_9745#0 CCTGATGTGGGCAGAAATGATGACCCAGGTACATTCCG--CCCAGCCCACCAAGCTTGTG 776
consensus_9745#2 ------------------------------------------------------------
consensus_9745#1 CCTGATGTGGGCACGAAAACTGATNGACCCCAGTTACAATTCCGGGCCAAGGCCACCAAG 606
consensus_9745#0 TTCATCCGGAACAAGGTAGTGCCGCACGGCACCAGTCACGATTCCCGCGAACGGATGATC 836
consensus_9745#2 ------------------------------------------------------------
consensus_9745#1 GCTTGNTGGTTTCCATNCCGGGAACAAGGGTNAGTTGCCCGCCANCGGCAACCAGTCACC 666
consensus_9745#0 AATCTGTACCGGCAGATGTTTCTTAACGTGGCGTCGTTTTCCGTGACG---AGCGCCAGC 893
consensus_9745#2 ------------------------------------------------------------
consensus_9745#1 GAATTCCCGGGGAAACGGATGATCAATCTGGTACCGGGCGGGATGTTTCTTAACGTTGAC 726
consensus_9745#0 TTTAGCGGTGACTCCGGAGCACAGGAGGAAATGTTCAATTATGTAGAATTTCCCCGCATA 953
consensus_9745#2 ------------------------------------------------------------
consensus_9745#1 GTTCGGTTTTCCCGTGACGAAGCGCCCAAGGCTTTTANTCCGGTTGAACTTCCCGGAGAG 786
consensus_9745#0 GAAAAAGGTGAAACGGTGAGCATTCCGGAACATTTGAAGGAAACCATACTGTCGCTACGG 1013
consensus_9745#2 ------------------------------------------------------------
consensus_9745#1 GCACACAGGGAGGCGCAAATTGTTTCACAC--TTTGATNTAAGCAAATNTTTCCCCCCGG 844
consensus_9745#0 CAGATCGTGTACGCTGGACGGGAAAGTATAATGGCACGCAATTGCTCGGAAAAGGCATGG 1073
consensus_9745#2 ------------------------------------------------------------
consensus_9745#1 GTTTAGAAACAAGGGNTGACAACCGGTTNAAGGCATTTCCCGGGGAACATTTTAACAGGG 904
consensus_9745#0 GGCCAAGCGCTTGTAAAGCTAATCGATTGCCCGGAGGGTAACTTTTTCGTCGACAAGTAC 1133
consensus_9745#2 ------------------------------------------------------------
consensus_9745#1 GACANGACCCATACATTGGTCGAGCTTAACCGGGCNNATCNNGTTACCGCCTTGGNACGG 964
consensus_9745#0 GAAAAGCTGAAGGAAAAGTACAACCTTCACAATCATGTAAAAATTACGGAAAATCAATAT 1193
consensus_9745#2 ------------------------------------------------------------
consensus_9745#1 GGANAGTTTAATGGGGCCGGCCAGTTGTC------------------------------- 993
consensus_9745#0 CGCGATCAGACATCGCTACATTTTGTGGAATAAAACTAATGCATCCTCAGAAACCCC 1250
consensus_9745#2 ---------------------------------------------------------
consensus_9745#1 ---------------------------------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||