These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9760#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 18 consensus length = 1040 fasta sequence [CCGCCCACGCGTCCGCCCACGCCCGCAGTTATCGTACCATCGTCGTCGGGCTAGGAATGGATTTCACCGGCAAGGTTGTGCTCATCACCGGGGCTAGCTCGGGCATTGGAGCTTCCACGGCCAAATATCTCACAAATCTCGGCGCATCCTGTGTGCTTGCTGCCCGGAACGAAGCGAAGCTGG-CCGAAGTGTGTAAGGA-GTGTGCTGCCCTGGGCAAGGCGACTCCGCTGACCGTCGTGACGGACGTGACGAAGCGGGCGGATCTCGAGCGGCTCCTCAAGCTGACCATCGCCAAGTACGGCCGGCTGGATGTGTTGGT-AAACAATGCGGGG-AAGGGGGCGGGCGGCAGCATCGAGGAAGCCGACCTGGACCAGTTCGATGACATACTCGACACGAACCTGCGGTCGGTGTTTGCGCTGACCAAGCTGGCCCTGCCCCATCTGCTCGCGGCCAAGGGGAACATCGTGAACGTGTCGAGTGTGGCCGGCACGAACTCGTTCCACAATGCGCTGTCGTACTGCGTTTCCAAGGCGGCACTCGATCAGTTCACGCGCTGCACCG-CGCTGGATCTGGCCGCGAAGGGTGTGCGCGTCAACTCCGT-CAATCCGGCGGTCATTGTGACCAACTTCCACAAAGCGA-T-CGGTATGG-AGGACGAAGCGTACGCCGCCTATCTGAAGCACTGCGAAACGACGCACCCG-TTGGGGCGCGT-CGG-AACT--GGGGAGGAGGTGGCGG-CCTCGATCGCATTCCTGGCCTGTGATGCGACGGCCAGCTTCACCACCGGCACCTGTCTGCGGGTGGACGGTGGAAAGCACATCCTGACGCCACGGTGAAATGTCTATCAATCACGCATCACGGATGAGAATGGAACGAGCGGGATTGGTTGAATCACATTCCAGAAACATTCTT-CGAATGCTTCGCATTAGATAAGCTTTGTAGCGATGTGACGATGTACCAAA-CAGGAGGAAAATTATAAATACACGATGTTGCATAATTAATCTAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCCATGTGCCCGAG] [+] EMBL BM600286 [CCGCCCACGCGTCCGCCCACGCGTCCGGTTATCGTACCATCGTCGTCGGGCTAGGAATGGATTTCACCGGCAAGGTTGTGCTCATCACCGGGGCTAGCTCGGGCATTGGAGCTTCCACGGCCAAATATCTCACCAATCTCGGTGCATCCTGTGTGCTTGCTGCCCGGAACGAAGCGAAGCTGG CCGAAGTTTGCAAGGA GTGTGCTGCCCTGGGCAAGGCGACTCCGCTGACCGTCGTGACGGACGTGACGAAGCGGGCGGATCTCGAGCGGCTCCTCAAGCTGACCATCGCCAAGTACGGCCGGCTGGATGTGTTGGT AAACAATGCGGGG AAGGGGGCGGGCGGCAGCATCGAGGAAGCCGACCTGGACCAGTTCGATGACATACTCGACACGAACCTGCGGTCGGTGTTTGCGCTGACCAAGCTGGCCCTGCCCCATCTGCTCGCGGCCAAGGGGAACATCGTGAACGTGTCGAGTGTGGCCGGCACGAACTCGTTCCACAATGCGCTGTCGTACTGCGTTTCCAAGGCGGCACTCGATCAGTTCACGCGCTGCACCG CGCTGGATCTG ] [+] EMBL BM595686 [CCGCCCACGCGTCCGCCCACG CGTCCG TATCGTACCATCGTCGTCGGGCTAGGAATGGATTTCACCGGCAAGGTTGTGCTCATCACCGGGGCTAGCTCGGGCATTGGAGCTTCCACGGCCAAATATCTCACCAATCTCGGTGCATCCTGTGTGCTTGCTGCCCGGAACGAAGCGAAGCTGG CCGAAGTTTGCAAGGA GTGTGCTGCCCTGGGCAAGGCGACTCCGCTGACCGTCGTGACGGACGTGACGAAGCGGGCGGATCTCGAGCGGCTCCTCAAGCTGACCATCGCCAAGTACGGCCGGCTGGATGTGTTGGT AAACAATGCGGGG AAGGGGGCGGGCGGCAGCATCGAGGAAGCCGACCTGGACCAGTTCGATGACATACTCGACACGAACCTGCGGTCGGTGTTTGCGCTGACCAAGCTGGCCCTGCCCCATCTGCTCGCGGCCAAGGGGAACATCGTGAACGTGTCGAGTGTGGCCGGCACGAACTCGTTCCACAATGCGCTGTCGTACTGCGTTTCCAAGGCGGCACTCGATCAGTTCACGCGCTGCACCGCCGCTGGATCTGGCCGCGAAGGGTGTGCGCGTCAACTCCGTCCAATCCGGCGGTTATTGTGACCAACTTCCACAAAGCGATT CGGCATGGAAGGACGAAGC ] [+] EMBL BM619760 [ CCGCAGTTATCGTACCATCGTCGTCGGGCTAGGAATGGATTTCACCGGCAAGGTTGTGCTCATCACCGGGGCTAGCTCGGGCATTGGAGCTTCCACGGCCAAATATCTCACCAATCTCGGTGCATCCTGTGTGCTTGCTGCCCGGAACGAAGCGAAGCTGG CCGAAGTTTGCAAGGA GTGTGCTGCCCTGGGCAAGGCGACTCCGCTGACCGTCGTGACGGACGTGACGAAGCGGGCGGATCTCGAGCGGCTCCTCAAGCTGACCATCGCCAAGTACGGCCGGCTGGATGTGTTGGT AAACAATGCGGGG AAGGGGGCGGGCGGCAGCATCGAGGAAGCCGACCTGGCCCAGTTCGATGACATACTCGACACGAACCTGCGGTCGGTGTTTGCGCTGACCAAGCTGGCCCTGCCCCATCTGCTCGCGGCCAAGGGGAACATCGTGAACGTGTCGAGTGTGGCCGGCACGAACTCGTTCCACAATGCGCTGTCGTACTGCGTTTCCAAGGCGGCACTCGATCAGTTCACGCGCTGCACCG CGCTGGATCTGGCCGCGAAGGGTGTGCGCGTCAACTCCGT CAATCCGGCGGTTATTGTGACCAACTTCCACAAAGCGA TCCGGCATGGAAGGACGAAGCGTACGC ] [+] EMBL BM613935 [ CCGCAGTTATCGTACCCTCGTCGTCGGGCTAGGAATGGATTTCACCGGCAAGGTTGTGCTCATCACCGGGGCTAGCTCGGGCATTGGAGCTTCCACGGCCAAATATCTCACCAATCTCGGTGCATCCTGTGTGCTTGCTGCCCGGAACGAAGCGAAGCTAG CCGAAGTTTGTAAGGA GTGTGCTGCCCTGGGCAAGGCGACTCCGCTGACCGTCGTGACGGACGTGACGAAGCGGGCGGATCTCGAGCGGCTCCTCAAGCTGACCATCGCCAAGTACGGCCGGCTGGATGTGTTGGT AAACAATGCGGGGAAAGGGGGCGGGCGGCAGCATCGAGGAAGCCGACCTGGACCAGTTCGATGACATACTCGACACGAACCTGCGGTCGGTGTTTGCGCTGACCAAGCTGGCCCTGCCCCATCTGCTCGCGGCCAAGGGGAACATCGTGAACGTGTCGAGTGTGGCCGGCACGAACTCGTTCCACAATGCGCTTTCGTACTGCGTTTCCAAGGCGGCACTCGATCAGTTCACGCGCTGCACCG CGCTGGATCTGGCCGCGAAGGGTGTGCGCGTCAACTCCGT CAATCCGGCGGTCATTGTGACCAACTTCCACAAAGCGA T CGGCATGGAAGGACGAAGCGTACGCCG ] [+] EMBL CNS09MPU [ TATCGTACCATCGTCGTCGGGCTAGGAATGGATTTCACCGGCAAGGTTGTGCTCATCACCGGAGCTAGCTCGGGCATTGGAGCTTCCACGGCCAAATATCTCACAAATCTCGGCGCATCCTGTGTGCTTGCTGCCCGGAACGAAGCGA CTGG CCGAAGTGTGTAAGGA GTGTGCTGCCCTGGGCAAGGCGACTCCGCTGACCGTCGTGACGGACGTGACGAAGCGGGCGGATCTCGAGCGGCTCCTCAAGCTGACCATCGCCAAGTACGGCCGGCTGGATGTGTTGGT AAACAATGCGGGG AAGGGGGCGGGCGGCAGCATCGAGGAAGCCGACCTGGACCAGTTCGATGACATACTCGACACGAACCTGCGGTCGGTGTTTGCGCTGACCAAGCTGGCCCTGCCCCATCTGCTCGCGGCCAAGGGGAACATCGTGAACGTGTCGAGTGTGGCCGGCACGAACTCGTTCCACAATGCGCTGTCGTACTGCGTTTCCAAGGCGGCACTCGATCAGTTCACGCGCTGCACCG CGCTGGATCTGGCCGCGAAGGGTGTGCGCGTCAACTCCGT CAATCCGGCGGTCATTGTGACCAACTTCCACAAAGCGA T CGGTATGG AGGACGAAGCGTACGCCGCCTATCTGAAGCACTGCGAAACGACGCACCCG TTGGGGCGCGT CGG AACT GGGGAGGAGGTGGCGG CCTCGATCGCATTCCTGGCCTGTGATGCGACGGCCAGCTTCACCACCGGCACCTGTCTGCGGGTGGACGGTGGAAAGCACATCCTGACGCCACGGTGAAATGTCTATCAATCACGCATCACGGATGAGAATGGAACGAGCGGGATTGGTTGAATCACATTCCAGAAACATTCTT CGAATGCTTCGCATTAGATAAGCTTTGTAGCGATGTGACGATGTACCAAA CAGGAGGAAAATTATAAATACACGATGTTGCATAATTAATCTAAAAAAAAAAAAAAA ] [+] EMBL BM638742 [ ccgGTCGTCGGGCTAGGAATGGATTTCACCGGCAAGGTTGTGCTCATCACCGGAGCTAGCTCGGGCATTGGAGCTTCCACGGCCAAATATCTCACAAATCTCGGCGCATCCTGTGTGCTTGCTGCCCGGAACGAAGCGAAGCTGG CCGAAGTGTGTAAGGA GTGTGCTGCCCTGGGCAAGGCGACTCCGCTGACCGTCGTGACGGACGTGACGAAGCGGGCGGATCTCGAGCGGCTCCTCAAGCTGACCATCGCCAAGTACGGCCGGCTGGATGTGTTGGT AAACAATGCGGGG AAGGGGGCGGGCGGCAGCATCGAGGAAGCCGACCTGGACCAGTTCGATGACATACTCGACACGAACCTGCGGTCGGTGTTTGCGCTGACCAAGCTGGCCCTGCCCCATCTGCTCGCGGCCAAGGGGAACATCGTGAACGTGTCGAGTGTGGCCGGCACGAACTCGTTCCACAATGCGCTGTCGTACTGCGTTTCCAAGGCGGCACTCGATCAGTTCACGCGCTGCACCG CGCTGGATCTGGCCGCGAAGGGTGTGCGCGTCAACTCCGT CAATCCGGCGGTCATTGTGACCAACTTCCACAAAGCGA TCCGGTATGG AGGACGAAGCGTACGCCGC ] [+] EMBL BX625804 [ CTAGGAATGGATTTCACCGGCAAGGTTGTGCTCATCACCGGAGCTAGCTCGGGCATTGGAGCTTCCACGGCCAAATATCTCACAAATCTCGGCGCATCCTGTGTGCTTGCTGCCCGGAACGAAGCGAAGCTGG CCGAAGTGTGTAAGGA GTGTGCTGCCCTGGGCAAGGCGACTCCGCTGACCGTCGTGACGGACGTGACGAAGCGGGCGGATCTCGAGCGGCTCCTCAAGCTGACCATCGCCAAGTACGGCCGGCTGGATGTGTTGGTAAAACAATGC ] [-] EMBL CNS09MPV [ ACCGGCAAGGTTGTGCTCATCACCGGAGCTAGCTCGGGCATTGGAGCTTCCACGGCCAAATTTCTCACAAATCTCGGCGCATCCTGTGTGCTTGCTGCCCGGAACGAAGCGAAGCTGG CCGAAGTGTGTAAGGA GTGTGCTGCCCTGGGCAAGGCGACTCCGCTGACCGTCGTGACGGACGTGACGAAGCGGGCGGATCTCGAGCGGCTCCTCAAGCTGACCATCGCCAAGTACGGCCGGCTGGATGTGTTGGT AAACAATGCGGGG AAGGGGGCGGGCGGCAGCATCGAGGAAGCCGACCTGGACCAGTTCGATAACATACTCGACACGAA CTGCGGTCGGTGTTTGCGCTGACCAAGCTGGCCCTGCCCCATCTGCTCGCGGCCAAGGGGAACATCGTGAACGTGTCGAGTGTGGCCGGCACGAACTCGTTCCACAATGCGCTGTCGTACTGCGTTTCCAAGGCGGCACTCGATCAGTTCACGCGCTGCACCG CGCTGGATCTGGCCGCGAAGGGTGTGCGCGTCAACTCCGT CAATCCGGCGGTCATTGTGACCAACTTCCACAAAGCGA T CGGTATGG AGGACGAAGCGTACGCCGCCTATCTGAAGCACTGCGAAACGACGCACCCG TTGGGGCGCGT CGG AACT GGGGAGGAGGTGGCGG CCTCGATCGCATTCCTGGCCTGTGATGCGACGGCCAGCTTCACCACCGGCACCTGTCTGCGGGTGGACGGTGGAAAGCACATCCTGACGCCACGGTGAAATGTCTATCAATCACGCATCACGGATGAGAATGGAACGAGCGGGATTGGTTGAATCACATTCCAGAAACATTCTT CGAA ATTCGCATTAGATAAGCTTTGTAGCGATGTGACGATGTACCAAATCAGGAGGAAAATTATAAATACACGAT ] [+] EMBL BX621075 [ GGCAAGGTTGTGCTCATCACCGGGGCTAGCTCGGGCATTGGAGCTTCCACGGCCAAATATCTCACCAATCTCGGTGCATCCTGTGTGCTTGCTGCCCGGAACGAAGCGAAGCTAG CCGAAGTTTGTAAGGA GTGTGCTGCCCTGGGCAAGGCGACTCCGCTGACCGTCGTGACGGACGTGACGAAGCGGGCGGATCTCGAGCGGCTCCTCAAGCTGACCATCGCCAAGTACGGCCGGCTGGATGTGTTGGT AAACAATGCGGGG AA ] [+] EMBL BX622755 [ TCACCGGAGCTAGCTCGGGCATTGGAGCTTCCACGGCCAAATATCTCACAAATCTCGGCGCATCCTGTGTGCTTGCTGCCCGGAACGAAGCGAAGCTGG CCGAAGTGTGTAAGGA GTGTGCTGCCCTGGGCAAGGCGACTCCGCTGACCGTCGTGACGGACGTGACGAAGCGGGCGGATCTCGAGCGGCTCCTCAAGCTGACCATCGCCAAGTACGGCCGGCTGGATGTGTTGGT AAACAATGCGGGG AAGGGGGCGGGCGGCAGCATCGAGGAAGCCGACCTGGACCAGTTCGATGACATACTCGACACGAACCTGCGGTCGGTGTTTGCGCTGACCAAGCTGGCCCTGCCCCATCTGCTCGCGGCCAAGGGGAACATCGTGAACGTGTCGAGTGTGGCCGGCACGAACTCGTTCCACAATGCGCTGTCGTACTGCGTTTCCAAGGCGGCACTCGATCAGTTCACGCGCTGCACCG CGCTGGATCTGGCCGCGAAG ] [+] EMBL BX625440 [ TCACCGGGGCTAGCTCGGGCATTGGAGCTTCCACGGCCAAATATCTCACCAATCTCGGTGCATCCTGTGTGCTTGCTGCCCGGAACGAAGCGAAGCTAG CCGAAGTTTGTAAGGA GTGTGCTGCCCTGGGCAAGGCGACTCCGCTGACCGTCGTGACGGACGTGACGAAGCGGGCGGATCTCGAGCGGCTCCTCAAGCTGACCATCGCCAAGTACGGCCGGCTGGATGTGTTGGT AAACAATGCGGGG AAGGGGGCGGGCGGCAGCATCGAGGAAGCCGACCTGGACCAGTTCGATGACATACTCGACACGAACCTGCGGTCGGTGTTTGCGCTGACCAAGCTGGCCCTGCCCCATCTGCTCGCGGCCAAGGGGAACATCGTGAACGTGTCGAGTGTGGCCGGCACGAACTCGTTCCACAATGCGCTTTCGTACTGCGTTTCCAAGGCGGCACTCGATCAGTTCACGCGCTGCACCG CGCTGGATCTGGCCGCGAAGGGTGTGCGCGTCAACTCCGT CAATCCGGCGGTCATTGTGACCAACTTCCACAAAGCGA T CGGCATGG AGGACGAAGCGTACGCCGCCTATCTGAAGCACTGCGAAACGACGCACCCG TTGGGGCGCGT CGG AACT GGGGAGGANGTGGCGG CTTCGATCGCATTCCTGGCCTGTGATGCGACGGGCAGCTTCACCACCGGCACCTGTCTGCGGGTGGACGGGGGAAAGCACATCCTGACGCCACGGTGAAATG ] [+] EMBL BX620101 [ CATTGGAGCTTCCACGGCCAAATATCTCACAAATCTCGGCGCATCCTGTGTGCTTGCTGCCCGGAACGAAGCGAAGCTGG CCGAAGTGTGTAAGGA GTGTGCTGCCCTGGGCAAGGCGACTCCGCTGACCGTCGTGACGGACGTGACGAAGCGGGCGGATCTCGAGCGGCTCCTCAAGCTGACCATCGCCAAGTACGGCCGGCTGGATGTGTTGGT AAACAATGCGGGG AAGGGGGCGGGCGGCAGCATCNAGGAAGCCGACCTGGACCAGTTCGATGACATACTCGACACGAACCTGCGGTCGGTGTTTGCGCTGACCAAGCTGGCCCTGCCCCATCTGCTCGCGGCCAAGGGGAACATCGTGAACGTGTCGAGTGTGGCCGGCACGAACTCGTTCCACAATGCGCTGTCGTACTGCGTTTCCAAGGCGGCACTCGATCAGTTCACGCGCTGCACCG CGCTGGATCTGGCCGCGAAGGGTGTGCGCGTCAACTCCGT CAATCCGGCGGTCATTGTGACCAACTTCCACAAAGCGA T CGGTATGG AGGACGAAGCGTACGCCGCCTATCTGAAGCACTGCGAAACGACNCACCCGTTTGGGGCGCGTCCGG AACT GGGGAGGANGTGGCGGNCCTCGATCGCATTCCTGGCCTGTGATG ] [+] EMBL BX611584 [ ATTGGAGCTTCCACGGCCAAATATCTCACAAATCTCGGCGCATCCTGTGTGCTTGCTGCCCGGAACGAAGCGAAGCTGG CCGAAGTGTGTAAGGA GTGTGCTGCCCTGGGCAAGGCGACTCCGCTGACCGTCGTGACGGACGTGACGAAGCGGGCGGATCTCGAGCGGCTCCTCAAGCTGACCATCGCCAAGTACGGCCGGCTGGATGTGTTGGT AAACAATGCGGGG AAGGGGGCGGGCGGCAGCATCGAGGAAGCCGACCTGGACCAGTTCGATGACATACTCGACACGAACCTGCGGTCGGTGTTTGCGCTGACCAAGCTGGCCCTGCCCCATCTGCTCGCGGCCAAGGGGAACATCGTGAACGTGTCGAGTGTGGCCGGCACGAACTCGTTCCACAATGCGCTGTCGTACTGCGTTTCCAAGGCGGCACTCGATCAGTTCACGCGCTGCACCG CGCTGGATCTGGCCGCGAAGGGTGTGCGCGTCAACT ] [-] EMBL CNS095SQ [ TTCCACGGCCAAATTTCTCACAAATCTCGGCGCATCCTGTGTGCTTGCTGCCCGGAACGAAGCGAAGCTGG CCGAAGTGTTTAAGGA GTGTGCTGCCCTGGGCAAGGCGACTCCGCTGACCGTCGTAACGGACGTGACGAAGCGGGCGAATCTCGAGCGGCTCCTCAAGCTGACCATCGCCAAGTACGGCCGGCTGGATTTGTTGGT AAACAATGCGGGG AAGGGGGCGGGCGGCAGCATCGAGGAAGCCGACCTGGACCAGTTCGATAACATACTCGACACGAA CTGCGGTCGGTGTTTGCGCTGACCAAGCTGGCCCTGCCCCATCTGCTCGCGGCCAAGGGGAACATCGTGAACGTGTCGAGTGTGGCCGGCACGAACTCGTTCCACAATGCGCTGTCGTACTGCGTTTCCAAGGCGGCACTCGATCAGTTCACGCGCTGCACCG CGCTGGATCTGGCCGCGAAGGGTGTGCGCGTCAACTCCGT CAATCCGGCGGGCATTGTGACCAACTTCCACAAAGCGA T CGGTATGG AGGACGAAGCGTACGCCGCC ] [+] EMBL CNS09EGA [ CTGTGTGCTTGCTGCCCGGAACGAAGCGAA CTGGACCGAAGTGTGTAAGGACGTGTGCTGCCCTGGGCAAGGCGACTCCGCTGACCGTCGTGACGGACGTGACGAAGCGGGCGGATCTCGAGCGGCTCCTCAAGCTGACCATCGCCAAGTACGGCCGGCTGGATGTGTTGGT AAACAATGCGGGG AAGGGGGCGGGCGGCAGCATCGAGGAAGCCGACCTGGACCAGTTCGATGACATACTCGACACGAACCTGCGGTCGGTGTTTGCGCTGACCAAGCTGGCCCTGCCCCATCTGCTCGCGGCCAAGGGGAACATCGTGAACGTGTCGAGTGTGGCCGGCACGAACTCGTTCCACAATGCGCTGTCGTACTGCGTTTCCAAGGCGGCACTCGATCAGTTCACGCGCTGCACCG CGCTGGATCTGGCCGCGAAGGGTGTGCGCGTCAACTCCGT CAATCCGGCGGTCATTGTGACCAACTTCCACAAAGCGA T CGGTATGG AGGACGAAGCGTACGCCGCCTATCTGAAGCACTGCGAAACGACGCACCCG TTGGGGCGCGT CGGCAACTGGGGGGAGGAGGTGGC ] [+] EMBL CNS095SP [ GTGTAAGGT GTGTGCTGCCCTGGGCAAGGCGACTCCGCTGACCGTCGTGACGGACGTGACGAAGCGGGCGAATCTCGAGCGGCTCCTCAAGCTGACCATCGCCAAGTACGGCCGGCTGGATGTGTTGGT AAACAATGCGGGG AAGGGGGCGGGCGGCAGCATCGAGGAAGCCGACCTGGACCAGTTCGATGACATACTCGACACGAACCTGCGGTCGGTGTTTGCGCTGACCAAGCTGGCCCTGCCCCATCTGCTCGCGGCCAAGGGGAACAGGGTGAACGTGTCGAGTGTGGCCGGCACGAACTCGTTCCACAATGCGCTGTCGTACTGCGTTTCCAAGGCGGCACTCGATCAGTTCACGCGCTGCACCG CGCTGGATCTGGCCGCGAAGGGTGTGCGCGTCAACTCCGT CAATCCGGCGGTCATTGTGACCAACTTCCACAAAGCGA T CGGTATGG AGGACGAAGCGTACGCCGCCTATCTGAAGCACTGCGAAACGACGCACCCG TTGGGGCGCGT CGG AACT GGGGAGGAGGTGGCGG CCTCGATCGCATTCCTGGCCTGTGATGCGACGGCCAGCTTCACCACCGGCACCTGTCTGCGGGTGGACGGTGGAAAGCACATCCTGACGCCACGGTGAAATGTCTATCAATCACGCATCACGGATGAGAATGGAACGAGCGGGATTGGTTGAATCACATTCCAGAAACATTCTT CGAATGCTTCGCATTAGATAAGCTTTGTAGCGATGTGACGATGTACCAAA CAGGAGGAAAATTATAAATACACGATGTTGCATAATTAACCTAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCCATGTGCCCGAG] [+] EMBL BX627574 [ GA GTGTGCTGCCCTGGGCAAGGCGACTCCGCTGACCGTCGTGACGGACGTGACGAAGCGGGCGGATCTCGAGCGGCTCCTCAAGCTGACCATCGCCAAGTACGGCCGGCTGGATGTGTTGGT AAACAATGCGGGG AAGGGGGCGGGCGGCAGCATCGAGGAAGCCGACCTGGACCAGTTCGATGACATACTCGACACGAACCTGCGGTCGGTGTTTGCGCTGACCAAGCTGGCCCTGCCCCATCTGCTCGCGGCCAAGGGGAACATCGTGAACGTGTCGAGTGTGGCCGGCACGAACTCGTTCCACAATGCGCTTTCGTACTGCGTTTCCAAGGCGGCACTCGATCAGTTCACGCGCTGCACCG CGCTGGATCTGGCCGCGAAGGGTGTGCGCGTCAACTCCGT CAATCCGGCGGTCATTGTGACCAACTTCCACAAAGCGA T CGGCATGG AGGACGAAGCGTACGCCGCCTATCTGAAGCACTGCGAAACGACGCACCCG TTGGGGCGCGT CGG AACT GGGGAGGAGGTGGCGG CTTCGATCGCATTCCTGGCCTGTGATGCGACGGCCAGCTTCACCACCGGCACCTGTCTGCGGGTGGACGGTGGAAAGCACATCCTGACGCCACGGTGAAATGTCTATCAATCACGCATCACGGATGAGAATGGAACGAGCGGGATTGGTTCAATCACATTCCAGAAACATTCTT TGAATGCTACGCATTANATAAGCTTTGNTGCGATGTGACGATGT ] [-] EMBL CNS09EGB [ GG AGGACGAAGCGTACGCCGCCTTTCTGAAGCACTGCGAAACGACGCACCCG TTGGGGCGCGT CGG AACT GGGGAGGAGGTGGCGG CCTCGATCGCATTCCTGGCCTGTGATGCGACGGCCAGCTTCACCACCGGCACCTGTCTGCGGGTGGACGGTGGAAAGCACATCCTGACGCCACGGTGAAATGTCTATCAATCACGCATCACGGATGAGAATGGAACGAGCGGGATTGGTTGAATCACATTCCAGAAACATTCTTCCGAA ATTTCGCATTAGATAAGCTTTGTAGCGATGTGACGATGTACCAAA CAGGAGGAAAATTATAAATACACGATGTTG ] consensusID : consensus_9760#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 1028 fasta sequence [ACTGGACGTACATCAGTTATCGTACCATCGTCGTCGGGCTAGGAATGGATTTCACCGGCAAGGTTGTGCTCATCACCGGAGCTAGCTCGGGCATTGGAGCTTCCACGGCCAAATATCTCACAAATCTCGGCGCATCCTGTGTGCTTGCTGCCCGGAACGAAGCGACTGGTCCGAAGTGTGTAAGGAGTGTGCTGCCCTGGGCAAGGCGACTCCGCTGACCGTCGTGACGGACGTGACGAAGCGGGCGGATCTCGAGCGGCTCCTCAAGCTGACCATCGCCAAGTACGGCCGGCTGGATGTGTTGGTAAACAATGCGGGGAAGGGGGCGGGCGGCACATCGAGGAAGCCGACCTGGACCAGTTCGATGACATACTCGACACGAACCTGCGGTCGGTGTTTGCGCTGACCAAGCTGGCCCTGCCCCATCTGCTCGCGGCCAAGGGGAACATCGTGAACGTGTCGAGTGTGGCCGGCACGAACTCGTTCCACAATGCGCTGTCGTACTGCGTTTCCAAGGCGGCACTCGATCAGTTCACGCGCTGCACCGCGCTGGGATCTGGCCGCGAAGGGTGTGCGCGTCAACTCCGTCAATCCGGGTGAGTGTGTGGAGGGCAAGAGCATTTCCCCAAAGGGGCAGTGCGTTACGTTATCATCCTGCTTTTTCGCATTTC-CACATTTGCAGCGGTCATTGTGACCAACTTCCAC-AAAGCGATCGGTATGGAGGACGAAGCGTACGCCGCCTATCTGAAGCACTGCGAAACGACGCACCCGTTGGGGCGCGTCGGAACTGGGGAGGAGGTGGCGGCCTCGATCGCATTCCTGGCCTGTGATGCGACGGCCAGCTTCACCACCGGCACCTGTCTCGCGGGTGGACGGTGGAAAGCACATCCTGACGCCACGGTGAAATGTCTATCAATCACGCATCACGGATGAGAATGGAACGAGCGGGATTGGTTGAATCACATTCCAGAAACATTCTTCCGAAATTCGCATTAGATAAGCTTTGTAGCGATGTGACGATGTACCAA] [+] EMBL CNS09G19 [ACTGGACGTACATCAGTTATCGTACCATCGTCGTCGGGCTAGGAATGGATTTCACCGGCAAGGTTGTGCTCATCACCGGAGCTAGCTCGGGCATTGGAGCTTCCACGGCCAAATATCTCACAAATCTCGGCGCATCCTGTGTGCTTGCTGCCCGGAACGAAGCGACTGGTCCGAAGTGTGTAAGGAGTGTGCTGCCCTGGGCAAGGCGACTCCGCTGACCGTCGTGACGGACGTGACGAAGCGGGCGGATCTCGAGCGGCTCCTCAAGCTGACCATCGCCAAGTACGGCCGGCTGGATGTGTTGGTAAACAATGCGGGGAAGGGGGCGGGCGGCACATCGAGGAAGCCGACCTGGACCAGTTCGATGACATACTCGACACGAACCTGCGGTCGGTGTTTGCGCTGACCAAGCTGGCCCTGCCCCATCTGCTCGCGGCCAAGGGGAACATCGTGAACGTGTCGAGTGTGGCCGGCACGAACTCGTTCCACAATGCGCTGTCGTACTGCGTTTCCAAGGCGGCACTCGATCAGTTCACGCGCTGCACCGCGCTGGGATCTGGCCGCGAAGGGTGTGCGCGTCAACTCCGTCAATCCGGGTGAGTGTGTGGAGGGCAAGAGCATTTCCCCAAAGGGGCAGTGCGTTACGTTATCATCCTGCTTTTTCGCATTTC CACATTTGCAGCGGTCATTGTGACCAACTTCCAC AAAGCGATCGGTATGGAGGACGAAGCGTACGCCGCCTATCTGAAGCACTGCGAA ] [-] EMBL CNS09G1A [ TTTCGCACATTTGCAGCGGTCATTGTGACCAACTTCCACAAAAGCGATCGGTATGGAGGACGAAGCGTACGCCGCCTATCTGAAGCACTGCGAAACGACGCACCCGTTGGGGCGCGTCGGAACTGGGGAGGAGGTGGCGGCCTCGATCGCATTCCTGGCCTGTGATGCGACGGCCAGCTTCACCACCGGCACCTGTCTCGCGGGTGGACGGTGGAAAGCACATCCTGACGCCACGGTGAAATGTCTATCAATCACGCATCACGGATGAGAATGGAACGAGCGGGATTGGTTGAATCACATTCCAGAAACATTCTTCCGAAATTCGCATTAGATAAGCTTTGTAGCGATGTGACGATGTACCAA] consensusID : consensus_9760#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 600 fasta sequence [CCGCCCACGCGTCCGCCCACGCGTCCGGCGGCAGCATCGAGGAAGCCGACCTGGACCAGTTCGATGACATACTCGACACGAACCTGCGGTCGGTGTTTGCGCTGACCAAGCTGGCCCTGCCCCATCTGCTCGCGGCCAAGGGGAACATCGTGAACGTGTCGAGTGTGGCCGGCACGAACTCGTTCCACAATGCGCTGTCGTACTGCGTTTCCAAGGCGGCACTCGATCAGTTCACGCGCTGCACCGCGCTGGATCTGGCCGCGAAGGGTGTGCGCGTCAACTCCGTCAATCCGGCGGTTATTGTGACCAACTTCCACAAAGCGATCGGCATGGAGGACGAAGCGTACGCCGCCTATCTTAAGCACTGCGAAACGACGCACCCATTGGGACGCGCCGGAACTGGGGAGGAGGTGGCGGCTTCGATCGCATTCCTGGCCTGTGATGCGACGGCCAGCTTCACCACCGGCACCTGTCTGCGGGTGGACGGTGGAAAGCACATCCTGACGCCACGGTGAAATGTCTATCAATCACGCATCACGGATGAGAATGGAACGAGCGGGATTGGTTCAATCACATTCCAGAAACATTCTTCGAATGCTT] [+] EMBL BM634358 [CCGCCCACGCGTCCGCCCACGCGTCCGGCGGCAGCATCGAGGAAGCCGACCTGGACCAGTTCGATGACATACTCGACACGAACCTGCGGTCGGTGTTTGCGCTGACCAAGCTGGCCCTGCCCCATCTGCTCGCGGCCAAGGGGAACATCGTGAACGTGTCGAGTGTGGCCGGCACGAACTCGTTCCACAATGCGCTGTCGTACTGCGTTTCCAAGGCGGCACTCGATCAGTTCACGCGCTGCACCGCGCTGGATCTGGCCGCGAAGGGTGTGCGCGTCAACTCCGTCAATCCGGCGGTTATTGTGACCAACTTCCACAAAGCGATCGGCATGGAGGACGAAGCGTACGCCGCCTATCTTAAGCACTGCGAAACGACGCACCCATTGGGACGCGCCGGAACTGGGGAGGAGGTGGCGGCTTCGATCGCATTCCTGGCCTGTGATGCGACGGCCAGCTTCACCACCGGCACCTGTCTGCGGGTGGACGGTGGAAAGCACATCCTGACGCCACGGTGAAATGTCTATCAATCACGCATCACGGATGAGAATGGAACGAGCGGGATTGGTTCAATCACATTCCAGAAACATTCTTCGAATGCTT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9760#0 CCGCCCACGCGTCCGCCCACGCCCGCAGTTATCGTACCATCGTCGTCGGGCTAGGAATGG 60 consensus_9760#2 ------------------------------------------------------------ consensus_9760#1 -----------ACTGGACGTACAT-CAGTTATCGTACCATCGTCGTCGGGCTAGGAATGG 48 consensus_9760#0 ATTTCACCGGCAAGGTTGTGCTCATCACCGGGGCTAGCTCGGGCATTGGAGCTTCCACGG 120 consensus_9760#2 ------------------------------------------------------------ consensus_9760#1 ATTTCACCGGCAAGGTTGTGCTCATCACCGGAGCTAGCTCGGGCATTGGAGCTTCCACGG 108 consensus_9760#0 CCAAATATCTCACAAATCTCGGCGCATCCTGTGTGCTTGCTGCCCGGAACGAAGCGAAGC 180 consensus_9760#2 ------------------------------------------------------------ consensus_9760#1 CCAAATATCTCACAAATCTCGGCGCATCCTGTGTGCTTGCTGCCCGGAACGAAGCGAC-T 167 consensus_9760#0 TGGCCGAAGTGTGTAAGGAGTGTGCTGCCCTGGGCAAGGCGACTCCGCTGACCGTCGTGA 240 consensus_9760#2 ------------------------------------------------------------ consensus_9760#1 GGTCCGAAGTGTGTAAGGAGTGTGCTGCCCTGGGCAAGGCGACTCCGCTGACCGTCGTGA 227 consensus_9760#0 CGGACGTGACGAAGCGGGCGGATCTCGAGCGGCTCCTCAAGCTGACCATCGCCAAGTACG 300 consensus_9760#2 ------------------------------------------------------------ consensus_9760#1 CGGACGTGACGAAGCGGGCGGATCTCGAGCGGCTCCTCAAGCTGACCATCGCCAAGTACG 287 consensus_9760#0 GCCGGCTGGATGTGTTGGTAAACAATGCGGGGAAGGGGGCGGGCGGCAGCATCGAGGAAG 360 consensus_9760#2 ---------------CCGCCCACGCGTCCGCCCACGCGTCCGGCGGCAGCATCGAGGAAG 45 consensus_9760#1 GCCGGCTGGATGTGTTGGTAAACAATGCGGGGAAGGGGGCGGGCGGCA-CATCGAGGAAG 346 * ** * * * * * * ******* *********** consensus_9760#0 CCGACCTGGACCAGTTCGATGACATACTCGACACGAACCTGCGGTCGGTGTTTGCGCTGA 420 consensus_9760#2 CCGACCTGGACCAGTTCGATGACATACTCGACACGAACCTGCGGTCGGTGTTTGCGCTGA 105 consensus_9760#1 CCGACCTGGACCAGTTCGATGACATACTCGACACGAACCTGCGGTCGGTGTTTGCGCTGA 406 ************************************************************ consensus_9760#0 CCAAGCTGGCCCTGCCCCATCTGCTCGCGGCCAAGGGGAACATCGTGAACGTGTCGAGTG 480 consensus_9760#2 CCAAGCTGGCCCTGCCCCATCTGCTCGCGGCCAAGGGGAACATCGTGAACGTGTCGAGTG 165 consensus_9760#1 CCAAGCTGGCCCTGCCCCATCTGCTCGCGGCCAAGGGGAACATCGTGAACGTGTCGAGTG 466 ************************************************************ consensus_9760#0 TGGCCGGCACGAACTCGTTCCACAATGCGCTGTCGTACTGCGTTTCCAAGGCGGCACTCG 540 consensus_9760#2 TGGCCGGCACGAACTCGTTCCACAATGCGCTGTCGTACTGCGTTTCCAAGGCGGCACTCG 225 consensus_9760#1 TGGCCGGCACGAACTCGTTCCACAATGCGCTGTCGTACTGCGTTTCCAAGGCGGCACTCG 526 ************************************************************ consensus_9760#0 ATCAGTTCACGCGCTGCACCGCGCTGG-ATCTGGCCGCGAAGGGTGTGCGCGTCAACTCC 599 consensus_9760#2 ATCAGTTCACGCGCTGCACCGCGCTGG-ATCTGGCCGCGAAGGGTGTGCGCGTCAACTCC 284 consensus_9760#1 ATCAGTTCACGCGCTGCACCGCGCTGGGATCTGGCCGCGAAGGGTGTGCGCGTCAACTCC 586 *************************** ******************************** consensus_9760#0 GTCAATCCGG-------------------------------------------------- 609 consensus_9760#2 GTCAATCCGG-------------------------------------------------- 294 consensus_9760#1 GTCAATCCGGGTGAGTGTGTGGAGGGCAAGAGCATTTCCCCAAAGGGGCAGTGCGTTACG 646 ********** consensus_9760#0 ------------------------------------CGGTCATTGTGACCAACTTCCACA 633 consensus_9760#2 ------------------------------------CGGTTATTGTGACCAACTTCCACA 318 consensus_9760#1 TTATCATCCTGCTTTTTCGCATTTCCACATTTGCAGCGGTCATTGTGACCAACTTCCACA 706 **** ******************* consensus_9760#0 AAGCGATCGGTATGGAGGACGAAGCGTACGCCGCCTATCTGAAGCACTGCGAAACGACGC 693 consensus_9760#2 AAGCGATCGGCATGGAGGACGAAGCGTACGCCGCCTATCTTAAGCACTGCGAAACGACGC 378 consensus_9760#1 AAGCGATCGGTATGGAGGACGAAGCGTACGCCGCCTATCTGAAGCACTGCGAAACGACGC 766 ********** ***************************** ******************* consensus_9760#0 ACCCGTTGGGGCGCGTCGGAACTGGGGAGGAGGTGGCGGCCTCGATCGCATTCCTGGCCT 753 consensus_9760#2 ACCCATTGGGACGCGCCGGAACTGGGGAGGAGGTGGCGGCTTCGATCGCATTCCTGGCCT 438 consensus_9760#1 ACCCGTTGGGGCGCGTCGGAACTGGGGAGGAGGTGGCGGCCTCGATCGCATTCCTGGCCT 826 **** ***** **** ************************ ******************* consensus_9760#0 GTGATGCGACGGCCAGCTTCACCACCGGCACCTGTCT-GCGGGTGGACGGTGGAAAGCAC 812 consensus_9760#2 GTGATGCGACGGCCAGCTTCACCACCGGCACCTGTCT-GCGGGTGGACGGTGGAAAGCAC 497 consensus_9760#1 GTGATGCGACGGCCAGCTTCACCACCGGCACCTGTCTCGCGGGTGGACGGTGGAAAGCAC 886 ************************************* ********************** consensus_9760#0 ATCCTGACGCCACGGTGAAATGTCTATCAATCACGCATCACGGATGAGAATGGAACGAGC 872 consensus_9760#2 ATCCTGACGCCACGGTGAAATGTCTATCAATCACGCATCACGGATGAGAATGGAACGAGC 557 consensus_9760#1 ATCCTGACGCCACGGTGAAATGTCTATCAATCACGCATCACGGATGAGAATGGAACGAGC 946 ************************************************************ consensus_9760#0 GGGATTGGTTGAATCACATTCCAGAAACATTCTTCGAATGCTTCGCATTAGATAAGCTTT 932 consensus_9760#2 GGGATTGGTTCAATCACATTCCAGAAACATTCTTCGAATGCTT----------------- 600 consensus_9760#1 GGGATTGGTTGAATCACATTCCAGAAACATTCTTCCGAAA-TTCGCATTAGATAAGCTTT 1005 ********** ************************ * ** consensus_9760#0 GTAGCGATGTGACGATGTACCAAACAGGAGGAAAATTATAAATACACGATGTTGCATAAT 992 consensus_9760#2 ------------------------------------------------------------ consensus_9760#1 GTAGCGATGTGACGATGTACCAA------------------------------------- 1028 consensus_9760#0 TAATCTAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCCATGTGCCCGAG 1040 consensus_9760#2 ------------------------------------------------ consensus_9760#1 ------------------------------------------------ |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||