These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9813#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 784 fasta sequence [AGGCAGAATTCGGCACGATGGGAATTGTTGGAAGTTCCTTTTGCAGATTGTATTGTGCCTTAGCAAGTGGAAGAAAGCCCAACATCCAGCAAAATGAGCGAAGGACTGACCGACAAGGAAGCGAAGGAGCTGCTGAAGCTGCCGGATGCCGACACAAAGAACTTCCTGTTCCAGCAAACGATGTACCGCATCAAAGATCCGCGTGCATCGCTCCCGTTCTACAACGAGGTGCTCGGGATGAACTTGCTCTGCAAGCTGGACTTCCCCGAGGCCAAGTTTTCGCTGTACTTTATGGGCTACGA-GGACATTGCCAACCAGCCGTCCGATCGTAAGGAATGCGTTCAGTGGGCAATGAGCCGGAAGGGCACCCTTGAACTCACCCACAACTGGGGTACGGAGAACGATGCCGAATTTAAGTACCACAACGGTAACAGTGACCCGCGCGGCTACGGTCACATCGGCATCATGGTGCCGGACGTGAAGAAGGCGTGCGAGCGGTTCGATCGGTTGGGCGTCGAGTACGTGAAGCGCCCGGACGAGGGACGCATGAAGGGTTTGGCCTTTATTAAGGACCCGGACGGCTATTGGATCGAGATCTTCAACGCATCGACGGTGCAAACGCACT-AAAACAGTTGT-GGTCTTTG-TTTTTT-AATTGAATTTATATAC-TTTTCATTAT-CAAGCGATAACG-TC-GGAATCGG-AAAACGGGCAAATAATTAAGGCGTATGC-GGAATGTGCAGAATTAG-AAGGGAGAAGAATAAAAACCACCCAAGCATTTTANAAAAAA] [+] EMBL BX468523 [AGGCAGAATTCGGCACGATGGGAATTGTTGGAAG TCCTTTTGCAGATTGTATTGTGCCTTAGCAAGTGGAAGAAAGCCCAACATCCAGCAAAATGAGCGAAGGACTGACCGACAAGGAAGCGAAGGAGCTGCTGAAGCTGCCGGATGCCGACACAAAGAACTTCCTGTTCCAGCAAACGATGTACCGCATCAAAGATCCGCGTGCATCGCTCCCGTTCTACAACGAGGTGCTCGGGATGAACTTGCTCTGCAAGCTGGACTTCCCCGAGGCCAAGTTTTCGCTGTACTTTATGGGCTACGAGGGACATTGCCAACCAGCCGTCCGATCGTAAGGAATGCGTTCAGTGGGCAATGAGCCGGAA ] [+] EMBL BX626403 [ AAGTTCCTTTTGCAGATTGTATTGTGCCTTAGCAAGTGGAAGAAAGCCCAACATCCAGCAAAATGAGCGAAGGACTGACCGACAAGGAAGCGAAGGAGCTGCTGAAGCTGCCGGATGCCGACACAAAGAACTTCCTGTTCCAGCAAACGATGTACCGCATCAAAGATCCGCGTGCATCGCTCCCGTTCTACAACGAGGTGCTCGGGATGAACTTGCTCTGCAAGCTGGACTTCCCCGAGGCCAAGTTTTCGCTGTACTTTATGGGCTACGA GGACATTGCCAACCAGCCGTCCGATCGTAAGGAATGCGTTCAGTGGGCAATGAGCCGGAAGGGCACCCTTGAACTCACCCACAACTGGGGCACGGAGAACGATGCCGAATTTAAGTACCACAACGGTAACAGTGACCCGCGCGGCTACGGCCACATCGGCATCATGGTGCCGGACGTGAAGAAGGCGTGCGAGCGGTTCGATCGGTTGGGCGTCGAGTACGTGAAGCGCCCGGACGAGGGACGCATGAAGGGTTTGGCCTTTATTAAGGACCCGGACGGCTATTGGATCGAGATCTTCAACGTATCCACGGTGCAAACGCACT AAAACAGATGT TTCTTTGTTTTTTT AATTGAATTTATATAC TTTTCTTTAC CAAGCGATAACG TC GGAATCGG AAAACGGGCAAATAATTAANGNGTATGC GGAATGTGCAGAATTAG AAGGGAGAAGAATAAAAACCNCC ] [+] EMBL BX623410 [ AAGTTCCTTTTGCAGATTGTATTGTGCCTTAGCAAGTGGAAGAAAGCCCAACATCCAGCAAAATGAGCGAAGGACTGACCGACAAGGAAGCGAAGGAGCTGCTGAAGCTGCCGGATGCCGACACAAAGAACTTCCTGTTCCAGCAAACGATGTACCGCATCAAAGATCCGCGTGCATCGCTCCCGTTCTACAACGAGGTGCTCGGGATGAACTTGCTCTGCAAGCTGGACTTCCCCGAGGCCAAGTTTTCGCTGTACTTTATGGGCTACGA GGACATTGCCAACCAGCCGTCCGATCGTAAGGAATGCGTTCAGTGGGCAATGAGCCGGAAGGGCACCCTTGAACTCACCCACAACTGGGGCACGGAGAACGATGCCGAATTTAAGTACCACAACGGTAACAGTGACCCGCGCGGCTACGGCCACATCGGCATCATGGTGCCGGACGTGAAGAAGGCGTGCGAGCGGTTCGATCGGTTGGGCGTCGAGTACGTGAAGCGCCCGGACGAGGGACGCATGAAGGGTTTGGCCTTTATTAAGGACCCGGACGGCTATTGGATCGAGATCTTCAACGTATCCACGGTGCAAACGCACT AAAACAG ] [+] EMBL BM618885 [ ccgaattgTTGGAAGATTGTATTGTGCCTTAGCAAGTGGAAGAAAGCCCAACATCCAGCAAAATGAGCGAAGGACTGACCGACAAGGAAGCGAAGGAGCTGCTGAAGCTGCCGGATGCCGACACAAAGAACTTCCTGTTCCAGCAAACGATGTACCGCATCAAAGATCCGCGTGCATCGCTCCCGTTCTACAACGAGGTGCTCGGGATGAACTTGCTCTGCAAGCTGGACTTCCCCGAGGCCAAGTTTTCGCTGTACTTTATGGGCTACGA GGACATTGCCAACCAGCCGTCCGATCGTAAGGAATGCGTTCAGTGGGCAATGAGCCGGAAGGGCACCCTTGAACTCACCCACAACTGGGGTACGGAGAACGATGCCGAATTTAAGTACCACAACGGTAACAGTGACCCGCGCGGCTACGGTCACATCGGCATCATGGTGCCGGACGTGAAGAAGGCGTGCGAGCGGTTCGATCGGTTGGGCGTCGAGTACGTGAAGCGCCCGGACGAGGGACGCATGAAGGGTTTGGCCTTTATTAAGGACCCGGACGGCTATTGGATCGAGATCTTCAACGCATCGACGGTGCAAACGCACT AAAACAGTTGT GGTCTTTG TTTTTT AATTGAATTTATATAC TTTTCATTAT CAAGCGATAACG TC GGAATCGG AAAACGGGCAAATAATTAAGGCGTATGC GGAATGT ] [+] EMBL BM634297 [ ccgattgTTGGAAGATTGTATTGTGCCTTAGCAAGTGGAAGAAAGCCCAACATCCAGCAAAATGAGCGAAGGACTGACCGACAAGGAAGCGAAGGAGCTGCTGAAGCTGCCGGATGCCGACACAAAGAACTTCCTGTTCCAGCAAACGATGTACCGCATCAAAGATCCGCGTGCATCGCTCCCGTTCTACAACGAGGTGCTCGGGATGAACTTGCTCTGCAAGCTGGACTTCCCCGAGGCCAAGTTTTCGCTGTACTTTATGGGCTACGA GGACATTGCCAACCAGCCGTCCGATCGTAAGGAATGCGTTCAGTGGGCAATGAGCCGGAAGGGCACCCTTGAACTCACCCACAACTGGGGTACGGAGAACGATGCCGAATTTAAGTACCACAACGGTAACAGTGACCCGCGCGGCTACGGTCACATCGGCATCATGGTGCCGGACGTGAAGAAGGCGTGCGAGCGGTTCGATCGGTTGGGCGTCGAGTACGTGAAGCGCCCGGACGAGGGACGCATGAAGGGTTTGGCCTTTATTAAGGACCCGGACGGCTATTGGATCGAGATCTTCAACGCATCGACGGTGCAAACGCACT AAAACAGTTGT GGTCTTTG TTTTTT AATTGAATTTATATACTTTTTCATTAT CAAGCGAT ] [+] EMBL BM601350 [ ccgattgTTGGAAGATTGTATTGTGCCTTAGCAAGTGGAAGAAAGCCCAACATCCAGCAAAATGAGCGAAGGACTGACCGACAAGGAAGCGAAGGAGCTGCTGAAGCTGCCGGATGCCGACACAAAGAACTTCCTGTTCCAGCAAACGATGTACCGCATCAAAGATCCGCGTGCATCGCTCCCGTTCTACAACGAGGTGCTCGGGATGAACTTGCTCTGCAAGCTGGACTTCCCCGAGGCCAAGTTTTCGCTGTACTTTATGGGCTACGA GGACATTGCCAACCAGCCGTCCGATCGTAAGGAATGCGTTCAGTGGGCAATGAGCCGGAAGGGCACCCTTGAACTCACCCACAACTGGGGTACGGAGAACGATGCCGAATTTAAGTACCACAACGGTAACAGTGACCCGCGCGGCTACGGTCACATCGGCATCATGGTGCCGGACGTGAAGAAGGCGTGCGAGCGGTTCGATCGGTTGGGCGTCGAGTACGTGAAGCGCCCGGACGAGGGACGCATGAAGGGTTTGGCCTTTATTAAGGACCCGGACGGCTATTGGATCGAGATCTTCAACGCATCGACGGTGCAAACGCACT AAAACAGTTGT GGTCTTTG TTTTTT AATTGAATTTATATAC TTTTCATTAT CAAGCGATAACG TC GGAATCGG AA ] [+] EMBL BX611192 [ GTATTGTGCCTTAGCAAGTGGAAGAAAGCCCAACATCCAGCAAAATGAGCGAAGGACTGACCGACAAGGAAGCGAAGGAGCTGCTGAAGCTGCCGGATGCCGACACAAAGAACTTCCTGTTCCAGCAAACGATGTACCGCATCAAAGACCCGCGTGCATCGCTCCCGTTCTACAACGAGGTGCTCGGGATGAACTTGCTCTGCAAGCTGGACTTCCCCGAGGCCAAGTTTTCGCTGTACTTTATTGGCTACGA GGACATTGCCAACCAGCCGTCCGATCGTAAGGAATGCGTTCAGTGGGCAATGAGCCGGAAGGGCACCCTTGAACTCACCCACAACTGGGGTACGGAGAACGATGCCGAATTTAAGTACCACAACGGTAACAGTGACCCGCGCGGCTACGGTCACATCGGCATCATGGTGCCGGACGTGAAGAAGGCGTGCGAGCGGTTCGATCGGTTGGGCGTCGAGTACGTGAAGCGCCCGGACGAGGGACGCATGAAGGGTTTGGCCTTTATTAAGGACCCGGACGGCTATTGGATCGAGATCTTCAACGCATCGACGGTGCAAACGCACT AAAACAGTTGT GGTCTTTG TTTTTT AATTGAATTTATATAC TTTTCATTAT CAAGCGATAACG TC GGAATCG ] [+] EMBL BM635492 [ ccgATTGTGCCTTAGCAAGTGGAAGAAAGCCCAACATCCAGCAAAATGAGCGAAGGACTGACCGACAAGGAAGCGAAGGAGCTGCTGAAGCTGCCGGATGCCGACACAAAGAACTTCCTGTTCCAGCAAACGATGTACCGCATCAAAGATCCGCGTGCATCGCTCCCGTTCTACAACGAGGTGCTCGGGATGAACTTGCTCTGCAAGCTGGACTTCCCCGAGGCCAAGTTTTCGCTGTACTTTATGGGCTACGA GGACATTGCCAACCAGCCGTCCGATCGTAAGGAATGCGTTCAGTGGGCAATGAGCCGGAAGGGCACCCTTGAACTCACCCACAACTGGGGTACGGAGAACGATGCCGAATTTAAGTACCACAACGGTAACAGTGACCCGCGCGGCTACGGTCACATCGGCATCATGGTGCCGGACGTGAAGAAGGCGTGCGAGCGGTTCGATCGGTTGGGCGTCGAGTACGTGAAGCGCCCGGACGAGGGACGCATGAAGGGTTTGGCCTTTATTAAGGACCCGGACGGCTATTGGATCGAGATCTTCAACGCATCGACGGTGCAAACGCACT AAAACAGTTGT GGTCTTTG TTTTTT AATTGAATTTATATAC TTTTCATTAT CAAGCGATAACG TC GGAATCGGAAAAACGGGC ] [+] EMBL BX621182 [ nATCCAGCAAAATGAGCGAAGGACTGACCGACAAGGAAGCGAAGGAGCTGCTGAAGCTGCCGGATGCCGACACAAAGAACTTCCTGTTCCAGCAAACGATGTACCGCATCAAAGATCCGCGTGCATCGCTCCCGTTCTACAACGAGGTGCTCGGGATGAACTTGCTCTGCAAGCTGGACTTCCCCGAGGCCAAGTTTTCGCTGTACTTTATGGGCTACGA GGACATTGCCAACCAGCCGTCCGATCGTAAGGAATGCGTTCAGTGGGCAATGAGCCGGAAGGGCACCCTTGAACTCACCCACAACTGGGGTACGGAGAACGATGCCGAATTTAAGTACCACAACGGTAACAGTGACCCGCGCGGCTACGGTCACATCGGCATCATGGTGCCGGACGTGAAGAAGGCGTGCGAGCGGTTCGATCGGTTGGGCGTCGAGTACGTGAAGCGCCCGGACGAGGGACGCATGAAGGGTTTGGCCTTTATTAAGGACCCGGACGGCTATTGGATCGAGATCTTCAACGCATCGACGGTGCAAACGCACT AAAACAGTTGT GGTCTTTG TTTTTT AATTGAATTTATATAC TTTTCATTAT CAAGCGATAACG TCGGGAATCGG AAAACGGGCAAATAATTAAGGCGTATGCGGGAATGTGCAGAATTAGAAAGGGAGAAGAATAAAAACCA ] [+] EMBL BX626366 [ AGGTGCTCGGGATGAACTTGCTCTGCAAGCTGGACTTCCCCGAGGCCAAGTTTTCGCTGTACTTTATGGGCTACGA GGACATTGCCAACCAGCCGTCCGATCGTAAGGAATGCGTTCAGTGGGCAATGAGCCGGAAGGGCACCCTTGAACTCACCCACAACTGGGGTACGGAGAACGATGCCGAATTTAAGTACCACAACGGTAACAGTGACCCGCNCGGCTACGGTCACATCGGCATCATGGTGCCGGACGTGAAGAAGGCGTGCGAGCGGTTCGATCGGNTGGGCGTCGAGTACGTGAAGCGCCCGGACGAGGGACGCATGAAGGGTTTGGCCTTTATTAAGGACCCGGACNGCTATTGGATCNAGATCTTCAACGCATCGACGGTGCAAACNCACT AAAACAGTTGTNGGTCTTTG TTTTTTNAATTGAATTTATATACTTTTTCNTTATCCAAGCGATAACGTTN GGAATCGG AAAACGGGCA ] [-] EMBL AGA280459 [ ATGCGTTCAGTGGGCAATGAGCCGGAAGGGCACCCTTGAACTCACCCACAACTGGGGTACGGAGAACGATGCCGAATTTAAGTACCACAACGGTAACAGTGACCCGCGCGGCTACGGTCACATCGGCATCATGGTGCCGGACGTGAAGAAGGCGTGCGAGCGGTTCGATCGGTTGGGCGTCGAGTACGTGAAGCGCCCGGACGAGGGACGCATGAAGGGTTTGGCCTTTATTAAGGACCCGGACGGCTATTGGATCGAGATCTTCAACGCATCGACGGTGCAAACGCACT AAAACAGTTGT GGTCTTTG TTTTTT AATTGAATTTATATAC TTTTCATTAT CAAGCGATAACG TC GGAATCGG AAAACGGGCAAATAATTAAGGCGTATGC GGAATGTGCAGAATTAG AAGGGAGAAGAATAAAAACCACCCAAGCATTTTANAAAAAA] [-] EMBL AGA284366 [ CACAACTGGGGTACGGAGAACGATGCCGAATTTAAGTACCACAACGGTAACAGTGACCCGCGCGGCTACGGTCACATCGGCATCATGGTGCCGGACGTGAAGAAGGCGTGCGAGCGGTTCGATCGGTTGGGCGTCGAGTACGTGAAGCGCCCGGACGAGGGACGCATGAAGGGTTTGGCCTTTATTAAGGACCCGGACGGCTATTGGATCGAGATCTTCAACGCATCGACGGTGCAAACGCACT AAAACAGTTGT GGTCTTTG TTTTTT AATTGAATTTATATAC TTTTCATTAT CAAGCGATAACG TC GGAATCGG AAAACGGGCAAATAATTAAGGCGTATGC GGAATGTGCAGAATTAG AAGGGAGAAGAATAAAAACCACCCAAGCATATTAAAAAAAA] [-] EMBL AGA283221 [ CGCACTAAAAACAGTTGT GGTCTTTG TTTTTT AATTGAATTTATATAC TTTTCATTAT CAAGCGATAACG TC GG ] consensusID : consensus_9813#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 700 fasta sequence [CCGCCCACGCGTCCGAACAAATCCAATAGGATTTAACCCCGGGGAGTTGTTAGAAGATTGTATTGTGCCTTAGCAAGTGGAAGAAACCTCAACATCCAGCAAAATGAGCGAAGGACTGACCGACAAGGAAGCGAAGGAGCTGCTGAAGCTGCCGGATGCCGACACAAAGAACTTCCTGTTCCAGCAAACGATGTATCGCATCAAAGATCCGCGTGCATCGCTCCCGTTCTACAACGAGGTGCTCGGGATGAACTTGCTCTGCAAGCTGGACTTCCCCGAGGCCAAGTTTTCGCTGTACTTTATGGGCTACGAGGACATTGCCAACCAGCCGTCCGATCGTAAGGAATGCGTTCAGTGGGCAATGAGCCGAAAGGGGACCCTTGAACTCACCCACAACTGGGGCACGGAGAACGATGCCGAATTTAAGTACCACAACGGTAACAGTGACCCGCGCGGCTACGGCCACATCGGCATCATGGTGCCGGACGTGAAGAAGGCGTGCGAGCGGTTCGATCGGTTGGGCGTCGAGTACGTGAAGCGCCC-GGACGAGGGACGCATGAAGGGTTTGGCCTTTATTAAGGACCCGGACGGCTATTGGATCGAGATCTTCAACGCATCCACGGTGCAAACGCACTAAAACAGATGTGTCTTTGTTTTTTAATTGAATTTATATACTTTTCTTTATCAAGCGATAACGTCG] [+] EMBL BM584481 [CCGCCCACGCGTCCGAACAAATCCAATAGGATTTAACCCCGGGGAGTTGTTAGAAGATTGTATTGTGCCTTAGCAAGTGGAAGAAACCTCAACATCCAGCAAAATGAGCGAAGGACTGACCGACAAGGAAGCGAAGGAGCTGCTGAAGCTGCCGGATGCCGACACAAAGAACTTCCTGTTCCAGCAAACGATGTATCGCATCAAAGATCCGCGTGCATCGCTCCCGTTCTACAACGAGGTGCTCGGGATGAACTTGCTCTGCAAGCTGGACTTCCCCGAGGCCAAGTTTTCGCTGTACTTTATGGGCTACGAGGACATTGCCAACCAGCCGTCCGATCGTAAGGAATGCGTTCAGTGGGCAATGAGCCGAAAGGGGACCCTTGAACTCACCCACAACTGGGGCACGGAGAACGATGCCGAATTTAAGTACCACAACGGTAACAGTGACCCGCGCGGCTACGGCCACATCGGCATCATGGTGCCGGACGTGAAGAAGGCGTGCGAGCGGTTCGATCGGTTGGGCGTCGAGTACGTGAAGCGCCCGGGACGAGGGACGCATGAAGGGTTTGGCCTTTATTAAGGACCCGGACGGCTATTGGA ] [+] EMBL BM633444 [ ccgTAGGATTTAACCCCGGGGAGTTGTTAGAAGATTGTATTGTGCCTTAGCAAGTGGAAGAAACCTCAACATCCAGCAAAATGAGCGAAGGACTGACCGACAAGGAAGCGAAGGAGCTGCTGAAGCTGCCGGATGCCGACACAAAGAACTTCCTGTTCCAGCAAACGATGTATCGCATCAAAGATCCGCGTGCATCGCTCCCGTTCTACAACGAGGTGCTCGGGATGAACTTGCTCTGCAAGCTGGACTTCCCCGAGGCCAAGTTTTCGCTGTACTTTATGGGCTACGAGGACATTGCCAACCAGCCGTCCGATCGTAAGGAATGCGTTCAGTGGGCAATGAGCCGAAAGGGGACCCTTGAACTCACCCACAACTGGGGCACGGAGAACGATGCCGAATTTAAGTACCACAACGGTAACAGTGACCCGCGCGGCTACGGCCACATCGGCATCATGGTGCCGGACGTGAAGAAGGCGTGCGAGCGGTTCGATCGGTTGGGCGTCGAGTACGTGAAGCGCCC GGACGAGGGACGCATGAAGGGTTTGGCCTTTATTAAGGACCCGGACGGCTATTGGATCGAGATCTTCAACGCATCCACGGTGCAAACGCACTAAAACAGATGTGTCTTTGTTTTTTAATTGAATTTATATACTTTTCTTTATCAAGCGATAACGTCG] [+] EMBL BX629026 [ AACTCCGCAGAATTGTTGGAAGATTGTATTGTGCCTTAGCAAGTGGAAGAAAGCCCAACATCCAGCAAAATGAGCGAAGGACTGACCGACAAGGAAGCGAAGGAGCTGCTGAAGCTGCCGGATGCCGACACAAAGAACTTCCTGTTCCAGCAAACGATGTACCGCATCAAAGATCCGCGTGCATCGCTCCCGTTCTACAACGAGGTGCTCGGGATGAACTTGCTCTGCAAGCTGGACTTCCCCGAGGCCAAGTTTTCGCTGTACTTTATGTGCTACGAGGACATTGCCAACCAGCCGTCCGATCGTAAGGAATGCGTTCAGTGGGCAATGAGCCGGAAGGGCACCCTTGAACTCACCCACAACTGGGGTACGGAGAACGATGCCGAATTTAAGTACCACAACGGTAACAGTGACCCGCGCGGCTACGGTCACATCGGCATCATGGTGCCGGACGTGAAGAAGGCGTGCGAGCGGTTCGATCGGTTGGGCGTCGAGTACGTGAAGCGCCC GGACGAGGGACGCATGAAGGGTTTGGCCTTTATTAAGGACCCGGACGGCTATTGGAT ] consensusID : consensus_9813#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 698 fasta sequence [CCGCTTGCTGTGCAATATTATTTAATTGATATTTCAATCCGTCCGTTCCTTTTGCAGATTGTATTGTGCCTTAGCAAGTGGAAGAAACCTCAACATCCAGCAAAATGAGCGAAGGACTGACCGACAAGGAAGCGAAGGAGCTGCTGAAGCTGCCGGATGCCGACACAAAGAACTTCCTGTTCCAGCAAACGATGTACCGCATCAAAGATCCGCGTGCATCGCTCCCGTTCTACAACGAGGTGCTCGGGATGAACTTGCTCTGCAAGCTGGACTTCCCCGAGGCCAAGTTTTCGCTGTACTTTATGGGCTACGAGGACATTGCCAACCAGCCGTCCGATCGTAAGGAATGCGTTCAGTGGGCAATGAGCCGGAAGGGCACCCTTGAACTCACCCACAACTGGGGTACGGAGAACGATGCCGAATTTAAGTACCACAACGGTAACAGTGACCCGCGCGGCTACGGTCACATCGGCATCATGGTGCCGGACGTGAAGAAGGCGTGCGAGCGGTTCGATCGGTTGGGCGTCGAGTACGTGAAGCGCCCGGACGAGGGACGCATGAAGGGTTTGGCCTTTATTAAGGACCCGGACGGCTATTGGATCGAGATCTTCAACGCATCCACGGTGCAAACGCACTAAAACAGATGT-GTCTTTGG-TTTTTAATTGAATTTATATAC-TTTTCTTTATCAAGCGATAACG] [+] EMBL BM637873 [CCGCTTGCTGTGCAATATTATTTAATTGATATTTCAATCCGTCCGTTCCTTTTGCAGATTGTATTGTGCCTTAGCAAGTGGAAGAAACCTCAACATCCAGCAAAATGAGCGAAGGACTGACCGACAAGGAAGCGAAGGAGCTGCTGAAGCTGCCGGATGCCGACACAAAGAACTTCCTGTTCCAGCAAACGATGTATCGCATCAAAGATCCGCGTGCATCGCTCCCGTTCTACAACGAGGTGCTCGGGATGAACTTGCTCTGCAAGCTGGACTTCCCCGAGGCCAAGTTTTCGCTGTACTTTATGGGCTACGAGGACATTGCCAACCAGCCGTCCGATCGTAAGGAATGCGTTCAGTGGGCAATGAGCCGAAAGGGGACCCTTGAACTCACCCACAACTGGGGCACGGAGAACGATGCCGAATTTAAGTACCACAACGGTAACAGTGACCCGCGCGGCTACGGCCACATCGGCATCATGGTGCCGGACGTGAAGAAGGCGTGCGAGCGGTTCGATCGGTTGGGCGTCGAGTACGTGAAGCGCCCGGACGAGGGACGCATGAAGGGTTTGGCCTTTATTAAGGACCCGGACGGCTATTGGATCGAGATCTTCAACGCATCCACGGTGCAAACGCACTAAAACAGATGT GTCTTTGG TTTTTAATTGAATTTATATAC TTTTCTTTATCAAGCGATAACG] [+] EMBL BM625580 [ ccgTGATATTTCAATCCGTCCGTTCCTTTTGCAGATTGTATTGTGCCTTAGCAAGTGGAAGAAAGCCCAACATCCAGCAAAATGAGCGAAGGACTGACCGACAAGGAAGCGAAGGAGCTGCTGAAGCTGCCGGATGCCGACACAAAGAACTTCCTGTTCCAGCAAACGATGTACCGCATCAAAGATCCGCGTGCATCGCTCCCGTTCTACAACGAGGTGCTCGGGATGAACTTGCTCTGCAAGCTGGACTTCCCCGAGGCCAAGTTTTCGCTGTACTTTATGGGCTACGAGGACATTGCCAACCAGCCGTCCGATCGTAAGGAATGCGTTCAGTGGGCAATGAGCCGGAAGGGCACCCTTGAACTCACCCACAACTGGGGTACGGAGAACGATGCCGAATTTAAGTACCACAACGGTAACAGTGACCCGCGCGGCTACGGTCACATCGGCATCATGGTGCCGGACGTGAAGAAGGCGTGCGAGCGGTTCGATCGGTTGGGCGTCGAGTACGTGAAGCGCCCGGACGAGGGACGCATGAAGGGTTTGGCCTTTATTAAGGACCCGGACGGCTATTGGATCGAGATCTTCAACGCATCGACGGTGCAAACGCACTAAAACAGTTGTGGTCTTTGGTTTTTTAATTGGATTTATATACTTTTTCATTATCAAGCGATAA ] [+] EMBL AGA285670 [ CTGCTGAAGCTGCCGGATGCCGACACAAAGAACTTCCTGTTCCAGCAAACGATGTACCGCATCAAAGATCCGCGTGCATCGCTCCCGTTCTACAACGAGGTGCTCGGGATGAACTTGCTCTGCAAGCTGGACTTCCCCGAGGCCAAGTTTTCGCTGTACTTTATGGGCTACGAGGACATTGCCAACCAGCCGTCCGATCGTAAGGAATGCGTTCAGTGGGCAATGAGCCGGAAGGGCACCCTTGAACTCACCCACAACTGGGGTACGGAGAACGATGCCGAATTTAAGTACCACAACGGTAACAGTGACCCGCGCGGCTACGGTCACATCGGCATCATGGTGCCGGACGTGAAGAAGGCGTGCGAGCGGTTCGATTGGTTGGGCGTCAAGTACGTGAAGCGCCCGGGCGAGGGACGCATGAAGGGTTTGGCCCTTATTAAGGACCC ] consensusID : consensus_9813#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 505 fasta sequence [TTTTTTTTTTTTTTTTTGGACGCTTTCAACGGGAATAATACAACAAATCCAATTGGATTTAACTCCGCAGAATTGTTGGAAGATTGTATTGTGCCTTAGCAAGTGGAAGAAAGCCCAACATCCAGCAAAATGAGCGAAGGACTGACCGACAAGGAAGCGAAGGAGCTGCTGAAGCTGCCGGATGCCGACACAAAGAACTTCCTGTTCCAGCAAACGATGTACCGCATCAAAGATCCGCGTGCATCGCTCCCGTTCTACAACGAGGTGCTCGGGATGAACTTGCTCTGCAAGCTGGACTTCCCCGAGGCCAAGTTTTCGCTGTACTTTATGGGCTACGAGGACATTGCCAACCAGCCGTCCGATCGTAAGGAATGCGTTCAGTGGGCAATGAGCCGGAAGGGCACCCTTGAACTCACCCACAACTGGGGTACGGAGAACGATGCCGAATTTAAGTACCACAACGGTAACAGTGACCCGCGCGGCTACGGTCACATCGGCATCATGG] [+] EMBL AGA281640 [TTTTTTTTTTTTTTTTTGGACGCTTTCAACGGGAATAATACAACAAATCCAATTGGATTTAACTCCGCAGAATTGTTGGAAGATTGTATTGTGCCTTAGCAAGTGGAAGAAAGCCCAACATCCAGCAAAATGAGCGAAGGACTGACCGACAAGGAAGCGAAGGAGCTGCTGAAGCTGCCGGATGCCGACACAAAGAACTTCCTGTTCCAGCAAACGATGTACCGCATCAAAGATCCGCGTGCATCGCTCCCGTTCTACAACGAGGTGCTCGGGATGAACTTGCTCTGCAAGCTGGACTTCCCCGAGGCCAAGTTTTCGCTGTACTTTATGGGCTACGAGGACATTGCCAACCAGCCGTCCGATCGTAAGGAATGCGTTCAGTGGGCAATGAGCCGGAAGGGCACCCTTGAACTCACCCACAACTGGGGTACGGAGAACGATGCCGAATTTAAGTACCACAACGGTAACAGTGACCCGCGCGGCTACGGTCACATCGGCATCATGG] consensusID : consensus_9813#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 311 fasta sequence [GTGTTTATTAAGCGCCAGTGGCCTTAGCAAGTGGAAGAAAGCCCAACATCCAGCAAAATGAGCGAAGGACTGACCGACAAGGAAGCGAAGGAGCTGCTGAAGCTGCCGGATGCCGACACAAAGAACTTCCTGTTCCAGCAAACGATGTACCGCATCAAAGATCCGCGTGCATCGCTCCCGTTCTACAACGAGGTGCTCGGGATGAACTTGCTCTGCAAGCTGGACTTCCCCGAGGCCAAGTTTTCGCTGTACTTTATGGGCTACGAGGACATTGCCAACCAGCCGTCCGATCGTAAGGAATGCGTTCAGTG] [+] EMBL AGA282164 [GTGTTTATTAAGCGCCAGTGGCCTTAGCAAGTGGAAGAAAGCCCAACATCCAGCAAAATGAGCGAAGGACTGACCGACAAGGAAGCGAAGGAGCTGCTGAAGCTGCCGGATGCCGACACAAAGAACTTCCTGTTCCAGCAAACGATGTACCGCATCAAAGATCCGCGTGCATCGCTCCCGTTCTACAACGAGGTGCTCGGGATGAACTTGCTCTGCAAGCTGGACTTCCCCGAGGCCAAGTTTTCGCTGTACTTTATGGGCTACGAGGACATTGCCAACCAGCCGTCCGATCGTAAGGAATGCGTTCAGTG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9813#0 ------------------------------AGGCAGAATTCGG----CACGATGGGAATT 26 consensus_9813#2 -----------------------CCGCTTGCTGTGCAATATTA----TTTAATTGATATT 33 consensus_9813#1 ----------------------CCGCCCACGCGTCCGAACAAA----TCCAATAGGATTT 34 consensus_9813#4 ------------------------------------------------------------ consensus_9813#3 TTTTTTTTTTTTTTTTTGGACGCTTTCAACGGGAATAATACAACAAATCCAATTGGATTT 60 consensus_9813#0 GT----TGGAAGTTCCTTTTGCAGATTGTATTGTGCCTTAGCAAGTGGAAGAAAGCCCAA 82 consensus_9813#2 TCAATCCGTCCGTTCCTTTTGCAGATTGTATTGTGCCTTAGCAAGTGGAAGAAACCTCAA 93 consensus_9813#1 AACCCCGGGGAGTT--GTTAGAAGATTGTATTGTGCCTTAGCAAGTGGAAGAAACCTCAA 92 consensus_9813#4 -----------GTG--TTTATTAAGCGCCAGTG-GCCTTAGCAAGTGGAAGAAAGCCCAA 46 consensus_9813#3 AACTCCGCAGAATT--GTTGGAAGATTGTATTGTGCCTTAGCAAGTGGAAGAAAGCCCAA 118 * ** * * ** ******************** * *** consensus_9813#0 CATCCAGCAAAATGAGCGAAGGACTGACCGACAAGGAAGCGAAGGAGCTGCTGAAGCTGC 142 consensus_9813#2 CATCCAGCAAAATGAGCGAAGGACTGACCGACAAGGAAGCGAAGGAGCTGCTGAAGCTGC 153 consensus_9813#1 CATCCAGCAAAATGAGCGAAGGACTGACCGACAAGGAAGCGAAGGAGCTGCTGAAGCTGC 152 consensus_9813#4 CATCCAGCAAAATGAGCGAAGGACTGACCGACAAGGAAGCGAAGGAGCTGCTGAAGCTGC 106 consensus_9813#3 CATCCAGCAAAATGAGCGAAGGACTGACCGACAAGGAAGCGAAGGAGCTGCTGAAGCTGC 178 ************************************************************ consensus_9813#0 CGGATGCCGACACAAAGAACTTCCTGTTCCAGCAAACGATGTACCGCATCAAAGATCCGC 202 consensus_9813#2 CGGATGCCGACACAAAGAACTTCCTGTTCCAGCAAACGATGTACCGCATCAAAGATCCGC 213 consensus_9813#1 CGGATGCCGACACAAAGAACTTCCTGTTCCAGCAAACGATGTATCGCATCAAAGATCCGC 212 consensus_9813#4 CGGATGCCGACACAAAGAACTTCCTGTTCCAGCAAACGATGTACCGCATCAAAGATCCGC 166 consensus_9813#3 CGGATGCCGACACAAAGAACTTCCTGTTCCAGCAAACGATGTACCGCATCAAAGATCCGC 238 ******************************************* **************** consensus_9813#0 GTGCATCGCTCCCGTTCTACAACGAGGTGCTCGGGATGAACTTGCTCTGCAAGCTGGACT 262 consensus_9813#2 GTGCATCGCTCCCGTTCTACAACGAGGTGCTCGGGATGAACTTGCTCTGCAAGCTGGACT 273 consensus_9813#1 GTGCATCGCTCCCGTTCTACAACGAGGTGCTCGGGATGAACTTGCTCTGCAAGCTGGACT 272 consensus_9813#4 GTGCATCGCTCCCGTTCTACAACGAGGTGCTCGGGATGAACTTGCTCTGCAAGCTGGACT 226 consensus_9813#3 GTGCATCGCTCCCGTTCTACAACGAGGTGCTCGGGATGAACTTGCTCTGCAAGCTGGACT 298 ************************************************************ consensus_9813#0 TCCCCGAGGCCAAGTTTTCGCTGTACTTTATGGGCTACGAGGACATTGCCAACCAGCCGT 322 consensus_9813#2 TCCCCGAGGCCAAGTTTTCGCTGTACTTTATGGGCTACGAGGACATTGCCAACCAGCCGT 333 consensus_9813#1 TCCCCGAGGCCAAGTTTTCGCTGTACTTTATGGGCTACGAGGACATTGCCAACCAGCCGT 332 consensus_9813#4 TCCCCGAGGCCAAGTTTTCGCTGTACTTTATGGGCTACGAGGACATTGCCAACCAGCCGT 286 consensus_9813#3 TCCCCGAGGCCAAGTTTTCGCTGTACTTTATGGGCTACGAGGACATTGCCAACCAGCCGT 358 ************************************************************ consensus_9813#0 CCGATCGTAAGGAATGCGTTCAGTGGGCAATGAGCCGGAAGGGCACCCTTGAACTCACCC 382 consensus_9813#2 CCGATCGTAAGGAATGCGTTCAGTGGGCAATGAGCCGGAAGGGCACCCTTGAACTCACCC 393 consensus_9813#1 CCGATCGTAAGGAATGCGTTCAGTGGGCAATGAGCCGAAAGGGGACCCTTGAACTCACCC 392 consensus_9813#4 CCGATCGTAAGGAATGCGTTCAGTG----------------------------------- 311 consensus_9813#3 CCGATCGTAAGGAATGCGTTCAGTGGGCAATGAGCCGGAAGGGCACCCTTGAACTCACCC 418 ************************* consensus_9813#0 ACAACTGGGGTACGGAGAACGATGCCGAATTTAAGTACCACAACGGTAACAGTGACCCGC 442 consensus_9813#2 ACAACTGGGGTACGGAGAACGATGCCGAATTTAAGTACCACAACGGTAACAGTGACCCGC 453 consensus_9813#1 ACAACTGGGGCACGGAGAACGATGCCGAATTTAAGTACCACAACGGTAACAGTGACCCGC 452 consensus_9813#4 ------------------------------------------------------------ consensus_9813#3 ACAACTGGGGTACGGAGAACGATGCCGAATTTAAGTACCACAACGGTAACAGTGACCCGC 478 consensus_9813#0 GCGGCTACGGTCACATCGGCATCATGGTGCCGGACGTGAAGAAGGCGTGCGAGCGGTTCG 502 consensus_9813#2 GCGGCTACGGTCACATCGGCATCATGGTGCCGGACGTGAAGAAGGCGTGCGAGCGGTTCG 513 consensus_9813#1 GCGGCTACGGCCACATCGGCATCATGGTGCCGGACGTGAAGAAGGCGTGCGAGCGGTTCG 512 consensus_9813#4 ------------------------------------------------------------ consensus_9813#3 GCGGCTACGGTCACATCGGCATCATGG--------------------------------- 505 consensus_9813#0 ATCGGTTGGGCGTCGAGTACGTGAAGCGCCCGGACGAGGGACGCATGAAGGGTTTGGCCT 562 consensus_9813#2 ATCGGTTGGGCGTCGAGTACGTGAAGCGCCCGGACGAGGGACGCATGAAGGGTTTGGCCT 573 consensus_9813#1 ATCGGTTGGGCGTCGAGTACGTGAAGCGCCCGGACGAGGGACGCATGAAGGGTTTGGCCT 572 consensus_9813#4 ------------------------------------------------------------ consensus_9813#3 ------------------------------------------------------------ consensus_9813#0 TTATTAAGGACCCGGACGGCTATTGGATCGAGATCTTCAACGCATCGACGGTGCAAACGC 622 consensus_9813#2 TTATTAAGGACCCGGACGGCTATTGGATCGAGATCTTCAACGCATCCACGGTGCAAACGC 633 consensus_9813#1 TTATTAAGGACCCGGACGGCTATTGGATCGAGATCTTCAACGCATCCACGGTGCAAACGC 632 consensus_9813#4 ------------------------------------------------------------ consensus_9813#3 ------------------------------------------------------------ consensus_9813#0 ACTAAAACAGTTGTGGTCTTTGTTTTTTAATTGAATTTATATACTTTTCATTATCAAGCG 682 consensus_9813#2 ACTAAAACAGATGTG-TCTTTGGTTTTTAATTGAATTTATATACTTTTCTTTATCAAGCG 692 consensus_9813#1 ACTAAAACAGATGTG-TCTTTGTTTTTTAATTGAATTTATATACTTTTCTTTATCAAGCG 691 consensus_9813#4 ------------------------------------------------------------ consensus_9813#3 ------------------------------------------------------------ consensus_9813#0 ATAACGTCGGAATCGGAAAACGGGCAAATAATTAAGGCGTATGCGGAATGTGCAGAATTA 742 consensus_9813#2 ATAACG------------------------------------------------------ 698 consensus_9813#1 ATAACGTCG--------------------------------------------------- 700 consensus_9813#4 ------------------------------------------------------------ consensus_9813#3 ------------------------------------------------------------ consensus_9813#0 GAAGGGAGAAGAATAAAAACCACCCAAGCATTTTANAAAAAA 784 consensus_9813#2 ------------------------------------------ consensus_9813#1 ------------------------------------------ consensus_9813#4 ------------------------------------------ consensus_9813#3 ------------------------------------------ |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||