These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9820#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 20 consensus length = 1447 fasta sequence [TATCGGTGCACACGATTAGCAGCAAATATAAATGCAGCTGGCGAATTATTAAGAACCACCGACGTGCGATCAAGTGTTTGGTGTTTAGTTCGACTAAAGTGTTTCCAGCCTCGCAAAGGCACACGCAACGACAAAAGTGTATTCGTGGGCTGCCTTGCAAGACAAAAACGGCGAGGGGGTGAAACCATGCGACAGCTCATCATTAGCGTTCGACGACTGGCGGCAGCGGCGTCAGCGGCAGGGACGAGTGTGTTGGTGCTACCTAGCCAGCAGCAGGGGAC-GAAGTTGGCTGTGCGTACGATTGCCAGCAGTGCCGCGGCGTACATAAAGTCGTCAACAACCTGTTCGCTTGCTCAGACCGCAACGTTAGCGCAGG-GGGTGAAAATGTTGGATTCACGCAAGCCCTTCACGGAAGATTTCTTCTTCAGACAGCTGTTCGATGAGCAAT-CCCACACCTATTCGTACCTGTTGGCAGACATCACGACGAAGGAAGCCATCCTGATCGATCCCGTACTAGAGCAGGCGAAACGTGATGCTCAGCTGATCAAGGAGCTTGGATTTACGCTGAAATATGCCCTGAATACTCACATGCACGCCGACCATGTCACCGGCACCGGTTTCCTCAAGCAGCTGCTACCCGGCACGGTAAGCGTCATCTCGCAAAGCAGCGGTGCCAAGGCGGACAAGCATCTAGTGGACAACGAAACGGTCCAGTTCGGGCGGCACGAGCTGCGAGCGATGTCCACGCCCGGCCACACGAACGGTTGCATGACGTTCCTGGTCGAGGAGCAGGGCATTGCGTTTACTGGCGATACGCTGCTGATTCGAGGTTGCGGACGCACCGACTTCCAGGAAGGTGATTCCCGCTCGCTGTATCGTTCCGTGCACGAGCGCATCTTCACACTGCCGGAAAACTTCCGTCTGTTTCCGGCGCACGATTACAAGGGTAACATGGAAACGACGGTTGCAGAAGAGAAGCGGTACAATCCACGGCTTACTAAGGATGTGGAAGCGTTCGTCGAGCTGATGAACAATTTGAACCTGCCTTATCCGAAGATGATTGACAAAGCTGTCCCGGCGAATCGTGAGTGTGGTTTGTTTGACATTCCGAAGGACGCATAAACTCTGGTGATAAACGGGTAGTGCGGCTAGGCGATTTTTTAAATATTTGCCTGCGAAAAGCCGAAAGTATTTACGTTGTTGGACGTCACAAGGTAGAAGTATGAAACGGCCTAGAAAGTTGTTGCAATATTTTGTGTGTATGATGTAGTAG-TTTTTTTCTTTCCTTTTGGGATCATCTTGGGTTTT-CCCATCAGACTCCAAAACTGTGTCCAAA-TTGGAATTTCACTTGCAAAGGAGTTGTAGTAGGGTTAGCCTCGCTCA------TGTTTGACTTATGCAAGGATTCTACAA-TGCA-TGCACAAAAATAAATGGTTACTTTTAAACAAAA] [+] EMBL CNS08GNV [TATCGGTGCACAGAATTAGCAGCAAATATAAATGCAGCTGGCGAATTATTAAGAACCACCGACGTGCGATCAAGTGTTTGGTGTTTAGTTCGACTAAAGTGTTTCCAGCCTCGCAAAGGCACACGCAACGACAAAAGTAAATTCGTGGGCTGCCTTGCAAGACAAAAACGGCGAGGGGGTG AACCATGCGACA CTCATCATTAGCGTTCGACGACTGGCGGCAGCGGCGTCA CGGCAGGGACGAGTGTGTTGGTGCTACCTAGCCAGCAGCAGGGGAC GAAGTTGGCTGTGCGTACGATTGCCAGCAGTGCCGCGGCGTACATAAAGTCGTCAACAACCTGTTCGCTTGCTCAGACCGTAACGTTAGCGCAGG GGGTGAAAATGTTGGATTCACGCAAGCCCTTCACGGAAGATTTCTTCTTCAGACAGCTGTTCGATGAGCAAT CCCACACCTATTCGTACCTGTTGGCAGACATCACGACGAAGGAAGCCATCCTGATCGATCCCGTACTGGAGCAGGCGAAACGTGATGCTCAGCTGATCAAGGAGCTTGGATTTACGCTGAAATATGCCCTGAATACTCACATGCACGCCGACCATGTCACCGGCACCGGTTTCCTCAAGCAGCTGCTACCCGGCAC GTAAGCGTCATCTCGCAAAGCAGCGGTGCCAAGGCGGACAAGCATCTAGTGGACAACGAAACGGTCCAGTTCGGGCGGCACGAGCTGCGAGCGATGTCCACGCCCGGCCACACGAACGGTTGCATGACGTTCCTGGTCGAGGAGCAGGGCATTGCGTTTACCGGCGATACGCTGCTGATTCGAGGTTGCGGACGCACCGACTTCCAGGAAGGTGATTCCCGCTCGCTGTATCGTTCCGTGCACGAGCGCATCTTCACACTGCCGGAAAACTTCCGTCTGTTTCCGGCGCACGATTACAAGGGTAACATGGAAACGACGGTTGC ] [+] EMBL CNS08GMT [ GTGCA ACGATTAGCAGCAAATATATATGCAGCTGGCGAATTATTAAGAACCACCGACGTGCGATCAAGTGTTTGGTGTTTAGTTCGACTAAAGTGTTTCCAGCCTCGCAAAGGCACACGCAACGACAAAAGTGTATTCGTGGGCTGCCTTGCAAGACAAAAACGGCGAGGGGGTGAAA CATGCGACA CTCATCATTAGCGTTCGACGACTGGCGGCAGCGGCGTCA CGGCAGGGACGAGTGTGTTGGTGCTACCTAGCCAGCAGCAGGGGACAGAAGTTGGCTGTGCGTACGATTGCCAGCAGTGCCGCGGCGTACATAAAGTCGTCAACAACCTGTTCGCTTGCTCAGACCGTAACGTTAGCGCAGGCGGGTGAAAATGTTGGATTCACGCAAGCCCTTCACGGAAGATTTCTTCTTCAGACAGCTGTTCGATGAGCAAT CCCACACCTATTCGTACCTGTTGGCAGACATCACGACGAAGGAAGCCATCCTGATCGATCCCGTACTGGAGCAGGCGAAACGTGATGCTCAGCTGATCAAGGAGCTTGGATTTACGCTGAAATATGCCCTGAATACTCACATGCACGCCGACCATGTCACCGGCACCGGTTTCCTCAAGCAGCTGCTA CCGGCAC GTAAGCGTCATCTCGCAAAGCAGCGGTGCCAAGGCGGACAAGCATCTAGTGGACAACGAAACGGTCCAGTTCGGGCGGCACGAGCTGCGAGCGATGTCCACGCCCGGCCACACGAACGGTTGCATGACGTTCCTGGTCGAGGAGCAGGGCATTGCGTTTACCGGCGATACGCTGCTGATTCGAGGTTGCGGACGCACCGACTTCCAGGAAGGTGATTCCCGCTCGCTGTATCGTTCCGTGCACGAGCGCATCTTCACACTGCCGGAAAACTTCCGTCTGTTTCCGGCGCACGATTACAAGGGTAACATGGAAACGACGGTTGCAGAAGAGAAGCGGTACAATCCACGGCTTACTAAG ] [+] EMBL BM616426 [ ccgCGATTTGCAGCAAATATAAATGCAGCTGGTGAATTATTAACAACCACCGACGTGCG TCAAGTGTTTGGTGCTTAGTTTGACTAAAGTGTTTCCAGCCTCGCAAAGGCACACGCAACGACAAAAGTGTGTTCGTGGGCTGCCTTGCAAGACAAAAACAGCGAGGGGGTGAAACCATGCGACAGCTCGTCATTAGCGTTCGACGACTGGCGGCAGCGGCGTCAGCGGCAGGGACGAGTGTGTTGGTGCTACCTAGCCAGCAGCAGGGGAC GAAGTTGGCTGTGCGTACGATTGCCAGCAGTGCCGCGGCGTACATAAAGTCGTCAACAACCTGTTCACTTGCTCAGACCGCAACGTTAGCGCAGG GGGTGAAAATGTTGGATTCACGCAAGCCCTTCACGGAAGATTTCTTCTTCAGACAGCTGTTCGATGAGCAAT CCCACACCTATTCGTACCTGTTGGCAGACATCACGACGAAGGAAGCCATCCTGATCGATCCCGTACTAGAGCAGGCGAAACGTGATGCTCAGTTGATCAAGGAGCTTGGATTTACGCTGAAATATGCCCTGAATACTCACATGCACGCCGACCATGTCACCGGCACCGGTTTCCTCAAGCAGCTGCTACCCGGCACGGTAAGCGTCA ] [+] EMBL BX607710 [ TAGCAGCAAATATAAATGCAGCTGGCGAATTATTAAGAACCACCGACGTGCGATCAAGTGTTTGGTGTTTAGTTCGACTAAAGTGTTTCCAGCCTCGCAAAGGCACACGCAACGACAAAAGTGTATTCGTGGGCTGCCTTGCAAGACAAAAACGGCGAGGGGGTGAAACCATGCGACAGCTCATCATTAGCGTTCGACGACTGGCGGCAGCGGCGTCAGCGGCAGGGACGAGTGTGTTGGTGCTACCTAGCCAGCAGCAGGGGAC GAAGTTGGCTGTGCGTACGATTGCCAGCAGTGCCGCGGCGTACATAAAGTCGTCAACAACCTGTTCGCTTGCTCAGACCGTAACGTTAGCGCAGG GGGTGAAAATGTTGGATTCACGCAAGCCCTTCACGGAAGATTTCTTCTTCAGACAGCTGTTCGATGAGCAAT CCCACACCTATTCGTACCTGTTGGCAGACATCACGACGAAGGAAGCCATCCTGATCGATCCCGTACTGGAGCAGGCGAAACGTGATGCTCAGCTGATCAAGGAGCTTGGATTTACGCTGAAATATGCCCTGAATACTCACATGCACGCCGACCATGTCACCGGCACCGGTTTCCTCAAGCAGCTGCTACCCGGCACGGTAAGCGTCATCTCGCAAAGCAGCGGTGCCAAGGCGGACAAGCATCTAGTGGACAACGAAACGGTCCAGTTCGGGCGGCACGAGCTGCGAGCGATGTCCACGCCCGGC ] [+] EMBL BX605332 [ ATTATTAACAACCACCGACGTGCG TCAAGTGTTTGGTGCTTAGTTTGACTAAAGTGTTTCCAGCCTCGCAAAGGCACACGCAACGACAAAAGTGTGTTCGTGGGCTGCCTTGCAAGACAAAAACAGCGAGGGGGTGAAACCATGCGACAGCTCGTCATTAGCGTTCGACGACTGGCGGCAGCGGCGTCAGCGGCAGGGACGAGTGTGTTGGTGCTACCTAGCCAGCAGCAGGGGAC GAAGTTGGCTGTGCGTACGATTGCCAGCAGTGCCGCGGCGTACATAAAGTCGTCAACAACCTGTTCACTTGCTCAGACCGCAACGTTAGCGCAGG GGGTGAAAATGTTGGATTCACGCAAGCCCTTCACGGAAGATTTCTTCTTCAGACAGCTGTTCGATGAGCAAT CCCACACCTATTCGTACCTGTTGGCAGACATCACGACGAAGGAAGCCATCCTGATCGATCCCGTACTAGAGCAGGCGAAACGTGATGCTCAGTTGATCAAGGAGCTTGGATTTACGCTGAAATATGCCCTGAATACTCACATGCACGCCGACCATGTCACCGGCACCGGTTTCCTCAAGCAGCTGCTACCCGGCACGGTAAGCGTCATCTCGCAAAGCAGCGGTGCCAAGGCG ] [+] EMBL BM642495 [ CCG GGCGTACATAAAGTCGTCAACAACCTGTTCGCTTGCTCAGACCGCAGCGTTAACGCAGG GGGTGAAAATGTTGGATTCACGCAAGCCCTTCACGGAAGATTTCTTCTTCAAACAGTTGTTCGATGAGCAAT CCCACACCTATTCGTACCTGTTGGCAGACATCACGACGAAGGAAGCCATCCTGATCGATCCCGTACTAGAGCACGCGAAACGTGATGCTCAGCTGATCAAGGAGCTTGGATTTACGCTCGAATATGCCCTGAATACTCACATGCACGCCGACCATGTCACCGGCACCGGTTTCCTCAAGCAGCTGCTACCCGGCACGGTAAGCGTCATCTCGCAGAGCATCGGTGCCAAGGCGGACAAGCATCTGGTGGACAACGAAACGGACCAGTTCGGGCGGCACGAGCTGCGAGCGATGTCCACGCCCGGGCACACGAACGGTTGCATGACGT ] [+] EMBL CNS098QM [ TCAACAACCTGTTCACTTGCTCAGACCGCAACGTTAGCGCAGG GGGTGAAAATGTTGGATTCACGCAAGCCCTTCACGGAAGATTTCTTCTTCAGACAGCTGTTCGATGAGCAAT CCCACACCTATTCGTACCTGTTGGCAGACATCACGACGAAGGAAGCCATCCTGATCGATCCCGTACTAGAGCAGGCGAAACGTGATGCTCAGTTGATCAAGGAGCTTGGATTTACGCTGAAATATGCCCTGAATACTCACATGCACGCCGACCATGTCACCGGCACCGGTTTCCTCAAGCAGCTGCTACCCGGCACGGTAAGCGTCATCTCGCAAAGCAGCGGTGCCAAGGCGGACAAGCATCTAGTGGACAACGAAACGGTCCAGTTCGGGCGGCACGAGCTGCGAGCGATGTCCACGCCCGGCCACACGAACGGTTGCATGACGTTCCTGGTCGAGGAGCAGGGCATTGCGTTTACTGGCGATACGCTGTTGATTCGAGGTTGCGGACGCACCGACTTCCAGGAAGGTGATTCCCGCTCGCTGTATCGTTCCGTGCACGAGCGCATCTTCACACTGCCGGAAAACTTCCGTCTGTTTCCGGCGCACGATTACAAGGGTAACATGGAAACGACGGTTGCAGAAGAGAAGCGGTAAAATCCACGGCTTACTAAGGATGTGGAAGCGTTCGTCGAGCTGATGAACAATTTGAACCTGCCTTATCCGAAGATGATTGACAAAGCTGTGCCGGCGAATCGTGAGTGTGGTTTGTTTGACATTCCGAAGGACGCATAAACTCTGGTGATAAACGGGTAGTGCGGCTAGGCGATTTTT ] [+] EMBL BX615291 [ TTGCTCAGACCGCAACGTTAGCGCATG GGGTGAAAATGTTGGATTCACGCAAGCCCTTCACGGAAGATTTCTTCTTCAGACAGCTGTTCGATGAGCAAT CCCACACCTATTCGTACCTGTTGGCAGACATCACGACGAAGGAAGCCATCCTGATCGATCCCGTACTAGAGCAGGCGAAACGTGATGCTCAGTTGATCAAGGAGCTTGGATTTACGCTGAAATATGCCCTGAATACTCACATCCACGCCGACCATGTCACCGGCACCGGTTTCCTCAAGCAGCTGCTACCCGGCACGGTAAGCGTCATCTCGCAAAGCAGCGGTGCCAAGGCGGACAAGCATCTAGTGGACAACGAAACGGTCCAGTTCGGGCGGCACGAGCTGCGAG ] [+] EMBL CNS08S46 [ CAACGTTAGCGCAGG GGGTGAAAATGTTGGATTCACGCAAGCCCTTCACGGAAGATTTCTTCTTCAGACAGTTGTTCGATGAGCAAT CCCACACCTATTCGTACCTGTTGGCAGACATCACGACGAAGGAAGCCATCCTGATCGATCCCGTACTAGAGCAGGCGAAACGTGATGCTCAGCTGATCAAGGAGCTTGGATTTACGCTGAAATATGCCCAGAATACTCACATGCACGCAGAACATGTCACCGGAACCGGTTTCCT ] [+] EMBL BX618117 [ AGCCCTTCACGGAAGAATTCTTCTTCAGACAGCTGTTCGATGAGCAAT CCCACACCTATTCGTACCGGTTGGCAGACATCACGACGAAGGAAGCCATCCTGATCGATCCCGTACTAGAGCAGGCGAAACGTGATGCTCAGTTTATCAAG ] [-] EMBL CNS08GMU [ CAATCCCCACACCTATTCGTACCTGTTGGCAGACATCACGACGAAGGAAGCCATCCTGATCGATCCCGTACTGGAGCAGGCGAAACGTGATGCTCAGCTGATCAAGGAGCTTGGATTTACGCTGAAATATGCCCTGAATACTCACATGCACGCCGACCATGTCACCGGCACCGGTTTCCTCAAGCAGCTGCTACCCGGCACGGTAAGCGTCATCTCGCAAAGCAGCGGTGCCAAGGCGGACAAGCATCTAGTGGACAACGAAACGGTCCAGTTCGGGCGGCACGAGCTGCGAGCGATGTCCACGCCCGGCCACACGAACGGTTGCATGACGTTCCTGGTCGAGGAGCAGGGCATTGCGTTTACCGGCGATACGCTGCTGATTCGAGGTTGCGGACGCACCGACTTCCAGGAAGGTGATTCCCGCTCGCTGTATCGTTCCGTGCACGAGCGCATCTTCACACTGCCGGAAAACTTCCGTCTGTTTCCGGCGCACGATTACAAGGGTAACATGGAAACGACGGTTGCAGAAGAGAAGCGGTACAATCCACGGCTTACTAAGGATGTGGAAGCGTTCGTCGAACTGATGAACAATTTGAACCTGCCTTATCCGAAGATGATTGACAAAGCTGTCCCGGCGAATCGTGAGTGTGGTTTGTTTGACATTCCGAAGGACGCATAAACTCTGGTGATAAACGGGTAGTGCGGCTAGGCGATTTTTTAAATATTCGCCTGCGAAAAGCCGGAAGTATTTACGTTGTTGGACGTCACAGGGTAGAAGTATGAAACGGCCTAGAAAGTTGTTGCAATATTTTGTGTGTATGATGTAGTAGTTTTTTTTCTTTCCTTTTGGGATCATCTTGGGTTTTCCCCATCAGACTCCAAAACTGTGTCCAAA TTGGAATTTCACCTGCAAAAGAGCTGTAGTTGGGTTAGCCTCATTCACGTTTTTTTTTTAATTATACAAGGATTtttgat tag ] [+] EMBL AGA281992 [ TTCGTACCTGTTGGCAGACATCACGACGAAGGAAGCCATCCTGATCGATCCCGTACTAGAGCAGGCGAAACGTGATGCTCAGTTGATCAAGGAGCTTGGATTTACGCTGAAATATGCCCTGAATACTCACATGCACGCCGACCATGTCACCGGCACCGGTTTCCTCAAGCAGCTGCTACCCGGCACGGTAAGCGTCATCTCGCAAAGCAGCGGTGCCAAGGCGGACAAGCATCTATTGGACAACGAAACGGTCCAGTTCGGGCGGCACGAGCTGCGAGCGATGTCCACGCCCGGCCACACGAACGGTTGCATGACGTTCCTGGTCGAGGAGCAAGGCATTGCGTTTACTGGCG ] [-] EMBL CNS08GNW [ GACGAAGGAAGCCATCCTGATCGATCCCGTACTGGAGCAGGCGAAACGTGATGCTCAGCTGATCAAGGAGCTTGGATTTACGCTGAAATATGCCCTGAATACTCACATGCACGCCGACCATGTCACCGGCACCGGTTTCCTCAAGCAGCTGCTACCCGGCACGGTAAGCGTCATCTCGCAAAGCAGCGGTGCCAAGGCGGACAAGCATCTAGTGGACAACGAAACGGTCCAGTTCGGGCGGCACGAGCTGCGAGCGATGTCCACGCCCGGCCACACGAACGGTTGCATGACGTTCCTGGTCGAGGAGCAGGGCATTGCGTTTACCGGCGATACGCTGCTGATTCGAGGTTGCGGACGCACCGACTTCCAGGAAGGTGATTCCCGCTCGCTGTATCGTTCCGTGCACGAGCGCATCTTCACACTGCCGGAAAACTTCCGTCTGTTTCCGGCGCACGATTACAAGGGTAACATGGAAACGACGGTTGCAGAAGAGAAGCGGTACAATCCACGGCTTACTAAGGATGTGGAAGCGTTCGTCGAACTGATGAACAATTTGAACCTGCCTTATCCGAAGATGATTGACAAAGCTGTCCCGGCGAATCGTGAGTGTGGTTTGTTTGACATTCCGAAGGACGCATAAACTCTGGTGATAAACGGGTAGTGCGGCTAGGCGATTTTTTAAATATTCGCCTGCGAAAAGCCGGAAGTATTTACGTTGTTGGACGTCACAGGGTAGAAGTATGAAACGGCCTAGAAAGTTGTTGCAATATTTTGTGTGTATGATGTAGTAGTTTTTTTTCTTTCTTTTTGGGATCATCTTGGGTTTTCCCCATCAGACTCCAAAACTGTGTCCAAA TTGGAATTTCACTTGCAAAAGAGCTGTAGTTGGGTTAGCCTCATTCACGTTTTTTTTTTAATTATACAAGGATTTT TGCA T TACAAAAATAAATGGTT ] [+] EMBL BX610813 [ TGCCCTGAATACTCACATGCACGCCGACCATGTCACCGGCACCGGTTTCCTCAAGCAGCTGCTACCCGGCACGGTAAGCGTCATCTCGCAAAGCAGCGGTGCCAAGGCGGACAAGCATCTAGTGGACAACGAAACGGTCCAGTTCGGGCGGCACGAGCTGCGAGCGATGTCCACGCCCGGCCACACGAACGGTTGCATGACGTTCCTGGTCGAGGAGCAGGGCATTGCGTTTACTGGCGATACGCTGTTGATTCGAGGTTGCGGACGCACCGACTTCCAGGAAGGTGATTCCCGCTCGCTGTATCGTTCCGTGCACGAGCGCATCTTCACACTGCCGGAAAACTTCCGTCTGTTTCCGGCGCACGATTACAAGGGTAACATGGAAACGACGGTTGCAGAAGAGAAGCGGTACAATCCACGGCTTACTAAGGATGTGGAAGCGTTCGTCGAGCTGATGAACAATTTGAACCTGCCTTATCCGAAGATGATTGACA ] [-] EMBL CNS098QN [ CGGTTTCCTCAAGCAGCTGCTACCCGGCACGGTAAGCGTCTTCTCGCAAAGCAGCGGTGCCAAGGCGGACAAGCATCTAGTGGACAACGAAACGGTCCAGTTCGGGCGGCACGAGCTGCGAGCGATGTCCACGCCCGGCCACACGAACGGTTGCATGACGTTCCTGGTCGAGGAGCAGGGCATTGCGTTTACTGGCGATACGCTGTTGATTCGAGGTTGCGGACGCACCGACTTCCAGGAAGGTGATTCCCGCTCGCTGTATCGTTCCGTGCACGAGCGCATCTTCACACTGCCGGAAAACTTCCGTCTGTTTCCGGCGCACGATTACAAGGGTAACATGGAAACGACGGTTGCAGAAGAGAAGCGGTACAATCCACGGCTTACTAAGGATGTGGAAGCGTTCGTCGAGCTGATGAACAATTTGAACCTGCCTTATCCGAAGATGATTGACAAAGCTGTCCCGGCGAATCGTGAGTGTGGTTTGTTTGACATTCCGAAGGACGCATAAACTCTGGTGATAAACGGGTAGTGCGGCTAGGCGATTTTTTAAATATTTGCCTGCGAAAAGCCGAAAGTATTTACGTTGTTGGACGTCACAAGGTAGAAGTATGAATCGGCCTAGAAAGTTGTTGCAATATTTTGTGTGTATGATGTAATAG CTTTTTTCTTTCCTTTTGGGATCTTCTTGGGGTTT TCCATCAGACTCCAAAACTGTGTCCAAATTTGGAATTTCACTTGCAAAGGAGTTGTAGTAGGG TATCGTCGCTCA TGTTTGACTTATGCAA GATTCTACAA TGCA TGCAa ] [+] EMBL BX618765 [ cgGCTACCCGGCACGGTAAGCGTCATCTCGCAAAGCAGCGGGGCCAAGGCGGACAATTATCTAGGGGACAACGAAACGGTCCAGTTCGGGCGGCACGAGCTGCGAGCGATGTCCACGCCCGGC ] [+] EMBL BX610814 [ ACCCGGCACGGTAAGCGTCATCTCGCAAAGCAGCGGGGCCAAGGCGGACAAGCATCTAGGGGACAACGAAACGGTCCAGTTCGGGCGGCACGAGCTGCGAGCGAAGTCCACGCCCGGCCACACGAACGGGTGCATGACGTCCCTGGTCGAGGAGCAGGGCATTGCGTTTACTGGCGAAACGC ] [+] EMBL BX615479 [ AGGTTGCGGACGCACCGACTTCCAGGAAGGTGATTCCCGCTCGCTGTATCGTTCCGTGCACGAGCGCATCTTCACACTGCCGGAAAACTTCCGTCTGTTTCCGGCGCACGATTACAAGGGTAACATGGAAACGACGGTTGCAGAAGAGAAGCGGTACAATCCACGGCTTACTAAGGATGTGGAAGCGTTCGTCGAGCTGATGAACAATTTGAACCTGCCTTATCCGAAGATGATTGACAAAGCTGTCCCGGCGAATCGTGAGTGTGGTTTGTTTGACATTCCGAAGGACGCATAAACTCTGGTGATAAACGGGTAGTGCGTCTAGGCGATTTTTTAAATATTTGCCTGCGAAAAGCCGAAAGTATTTACGTTGTTGGACGTCACAAGGTAGAAGTATGAATCGGCCTAGAAAGTTGTTGCAATATTTTGTGTGTATGATGTAGTAG CTTTTTTCTTTCCTTTTGGGATCTTCTTGGGGTTT TCCATCAGACTCCAAAACTGTGTCCAAATTTGGAATTTCACTTGCAAAGGAGTTGTAGTAGGGTTAGCTTCGCTCA TGTTTGACTTATGCAAGGATTCTACA ] [-] EMBL AGA280296 [ TGACAAAGCTGTCCCGGCGAATCGTGAGTGTGGTTTGTTTGACATTCCGAAGGACGCATAAACTCTGGTGATAAACGGGTAGTGCGGCTAGGCGATTTTTTAAATATTTGCCTGCGAAAAGCCGAAAGTATTTACGTTGTTGGACGTCACAAGGTAGAAGTATGAATCGGCCTAGAAAGTTGTTGCAATATTTTGTGTGTATGATGTAGTAG CTTTTTTCTTTCCTTTTGGGATCTTCTTGGGGTTT TCCATCAGACTCCAAAACTGTGTCCAAATTTGGAATTTCACTTGCAAAGGAGTTGTAGTAGGGTTAGCTTCGCTCA TGTTTGACTTATGCAAGGATTCTACAATTGCATTGCA AAAATAAAACGGTTACTTTTAAACAAAA] [-] EMBL CNS090E3 [ GAAACGGCCTAGAAAGTTGTTGCAATATTTTGTGTGTATGATGTAGTAGTTTTTTTTCTTTCCTTTTGGGATCATCTTGGGTTTTCCCCATCAGACTCCAAAACTGTGTCCAAA TTGGAATTTCAC ] consensusID : consensus_9820#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 678 fasta sequence [CCGCGCTATCGGTGCACACGATTAGCAGCAAATATAAATGCAGCTGGTGAATTATTAAGAACCACCGACGTGCGATCAAGTGTTTGGTGCTTAGTTTGACTAAAGTGTTTCCAGACTCGCAAAGGCACACGCAACGACAAAAGTGTGTTCGTGGGCTGCCTTGCAAGACCAAAACAGCGAAGGGGCGAAACCATGCGACAGCTCATCATTAGCGTTCGACGACTGGCGGCAGCGGCGTCAGCGACAGGGACGAGTGTGTTGGTGCTACCTAGCCAGCAGCAGGGGACGAAGTTGGCTGTGCGTACGATTGCTAGCAGTGCCGCGGCGTACATAAAGTCGTCAACAACCTGTTCGCTTGCTCAGACCGCAACGTTAGCGCAGGGGGTGAAAATGTTGGATTCACGCAAGCCGTTCACGGAAGATTTCTTCTTCAGACAGGTGAGCTCGTATATTTACGTATATTTATCATCGTCGTCACTGGAATCGGCAGCTTTCTTCGGACGAACAACTAATGTAGGAAGACAAAATAGGAGTGCATTGGGTCTGACAAGAGTCATTACATTCGTGGTGGGGGTCATCATGAAGAGCATAGCATGGTTTCGTTTTGTATGTATTGATGCTGTAATATGATTTCCGCTGTGTCATGTTAGGAGCAAGCTTGGCCAAATTAATTTCCTG] [+] EMBL BM623481 [CCGCGCTATCGGTGCACACGATTAGCAGCAAATATAAATGCAGCTGGTGAATTATTAAGAACCACCGACGTGCGATCAAGTGTTTGGTGCTTAGTTTGACTAAAGTGTTTCCAGACTCGCAAAGGCACACGCAACGACAAAAGTGTGTTCGTGGGCTGCCTTGCAAGACCAAAACAGCGAAGGGGCGAAACCATGCGACAGCTCATCATTAGCGTTCGACGACTGGCGGCAGCGGCGTCAGCGACAGGGACGAGTGTGTTGGTGCTACCTAGCCAGCAGCAGGGGACGAAGTTGGCTGTGCGTACGATTGCTAGCAGTGCCGCGGCGTACATAAAGTCGTCAACAACCTGTTCGCTTGCTCAGACCGCAACGTTAGCGCAGGGGGTGAAAATGTTGGATTCACGCAAGCCGTTCACGGAAGATTTCTTCTTCAGACAGGTGAGCTCGTATATTTACGTATATTTATCATCGTCGTCACTGGAATCGGCAGCTTTCTTCGGACGAACAACTAATGTAGGAAGACAAAATAGGAGTGCATTGGGTCTGACAAGAGTCATTACATTCGTGGTGGGGGTCATCATGAAGAGCATAGCATGGTTTCGTTTTGTATGTATTGATGCTGTAATATGATTTCCGCTGTGTCATGTTAGGAGCAAGCTTGGCCAAATTAATTTCCTG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9820#0 ------TATCGGTGCACACGATTAGCAGCAAATATAAATGCAGCTGGCGAATTATTAAGA 54 consensus_9820#1 CCGCGCTATCGGTGCACACGATTAGCAGCAAATATAAATGCAGCTGGTGAATTATTAAGA 60 ***************************************** ************ consensus_9820#0 ACCACCGACGTGCGATCAAGTGTTTGGTGTTTAGTTCGACTAAAGTGTTTCCAGCCTCGC 114 consensus_9820#1 ACCACCGACGTGCGATCAAGTGTTTGGTGCTTAGTTTGACTAAAGTGTTTCCAGACTCGC 120 ***************************** ****** ***************** ***** consensus_9820#0 AAAGGCACACGCAACGACAAAAGTGTATTCGTGGGCTGCCTTGCAAGACAAAAACGGCGA 174 consensus_9820#1 AAAGGCACACGCAACGACAAAAGTGTGTTCGTGGGCTGCCTTGCAAGACCAAAACAGCGA 180 ************************** ********************** ***** **** consensus_9820#0 GGGGGTGAAACCATGCGACAGCTCATCATTAGCGTTCGACGACTGGCGGCAGCGGCGTCA 234 consensus_9820#1 AGGGGCGAAACCATGCGACAGCTCATCATTAGCGTTCGACGACTGGCGGCAGCGGCGTCA 240 **** ****************************************************** consensus_9820#0 GCGGCAGGGACGAGTGTGTTGGTGCTACCTAGCCAGCAGCAGGGGACGAAGTTGGCTGTG 294 consensus_9820#1 GCGACAGGGACGAGTGTGTTGGTGCTACCTAGCCAGCAGCAGGGGACGAAGTTGGCTGTG 300 *** ******************************************************** consensus_9820#0 CGTACGATTGCCAGCAGTGCCGCGGCGTACATAAAGTCGTCAACAACCTGTTCGCTTGCT 354 consensus_9820#1 CGTACGATTGCTAGCAGTGCCGCGGCGTACATAAAGTCGTCAACAACCTGTTCGCTTGCT 360 *********** ************************************************ consensus_9820#0 CAGACCGCAACGTTAGCGCAGGGGGTGAAAATGTTGGATTCACGCAAGCCCTTCACGGAA 414 consensus_9820#1 CAGACCGCAACGTTAGCGCAGGGGGTGAAAATGTTGGATTCACGCAAGCCGTTCACGGAA 420 ************************************************** ********* consensus_9820#0 GATTTCTTCTTCAGACAGCTGTTCGATGAGCAATCCCACACCTATTCGTACCTGTTGGCA 474 consensus_9820#1 GATTTCTTCTTCAGACAG-------GTGAGC--TCGTATATTTACGTATATTTATCATC- 470 ****************** ***** ** * * ** ** * * * consensus_9820#0 GACATCACGACGAA-GGAAGCCATCCT-GATCGATCCCGTACTAGAGCAGGCGAAACGTG 532 consensus_9820#1 GTCGTCACTGGAATCGGCAGCTTTCTTCGGACGAACAACTAATGTAGGAAGACAAAATAG 530 * * **** * ** *** ** * * *** * ** * ** * * *** * consensus_9820#0 ATGCTCAGCTGATCAAGGAGCTTGGATTTACGCTGAAATATGCCCTGAATACTCACATGC 592 consensus_9820#1 GAGTGCATTGGGTCTGACAA----GAGTCA---TTACATTCGTGGTGGGGGTCATCATGA 583 * ** * ** * ** * * * * ** * ** **** consensus_9820#0 ACGCCGACCATGTCACCGGCACCGGTTTCCTCAAGCAGCTGCTACCCGGCACGGTAAGCG 652 consensus_9820#1 A----GAGCATAGCAT-GGTTTCGTTTTGTATGTATTGATGCTGT--AATATGATTTCCG 636 * ** *** ** ** ** *** * **** * * * ** consensus_9820#0 TCATCTCGCAA-AGCAGCGGTGCCAAGGCGGACAAGCATCTAGTGGACAACGAAACGGTC 711 consensus_9820#1 CTGTGTCATGTTAGGAGCAA-GCTTGGCCAAATTAATTTCCTG----------------- 678 * ** ** *** ** * * * * ** * consensus_9820#0 CAGTTCGGGCGGCACGAGCTGCGAGCGATGTCCACGCCCGGCCACACGAACGGTTGCATG 771 consensus_9820#1 ------------------------------------------------------------ consensus_9820#0 ACGTTCCTGGTCGAGGAGCAGGGCATTGCGTTTACTGGCGATACGCTGCTGATTCGAGGT 831 consensus_9820#1 ------------------------------------------------------------ consensus_9820#0 TGCGGACGCACCGACTTCCAGGAAGGTGATTCCCGCTCGCTGTATCGTTCCGTGCACGAG 891 consensus_9820#1 ------------------------------------------------------------ consensus_9820#0 CGCATCTTCACACTGCCGGAAAACTTCCGTCTGTTTCCGGCGCACGATTACAAGGGTAAC 951 consensus_9820#1 ------------------------------------------------------------ consensus_9820#0 ATGGAAACGACGGTTGCAGAAGAGAAGCGGTACAATCCACGGCTTACTAAGGATGTGGAA 1011 consensus_9820#1 ------------------------------------------------------------ consensus_9820#0 GCGTTCGTCGAGCTGATGAACAATTTGAACCTGCCTTATCCGAAGATGATTGACAAAGCT 1071 consensus_9820#1 ------------------------------------------------------------ consensus_9820#0 GTCCCGGCGAATCGTGAGTGTGGTTTGTTTGACATTCCGAAGGACGCATAAACTCTGGTG 1131 consensus_9820#1 ------------------------------------------------------------ consensus_9820#0 ATAAACGGGTAGTGCGGCTAGGCGATTTTTTAAATATTTGCCTGCGAAAAGCCGAAAGTA 1191 consensus_9820#1 ------------------------------------------------------------ consensus_9820#0 TTTACGTTGTTGGACGTCACAAGGTAGAAGTATGAAACGGCCTAGAAAGTTGTTGCAATA 1251 consensus_9820#1 ------------------------------------------------------------ consensus_9820#0 TTTTGTGTGTATGATGTAGTAGTTTTTTTCTTTCCTTTTGGGATCATCTTGGGTTTTCCC 1311 consensus_9820#1 ------------------------------------------------------------ consensus_9820#0 ATCAGACTCCAAAACTGTGTCCAAATTGGAATTTCACTTGCAAAGGAGTTGTAGTAGGGT 1371 consensus_9820#1 ------------------------------------------------------------ consensus_9820#0 TAGCCTCGCTCATGTTTGACTTATGCAAGGATTCTACAATGCATGCACAAAAATAAATGG 1431 consensus_9820#1 ------------------------------------------------------------ consensus_9820#0 TTACTTTTAAACAAAA 1447 consensus_9820#1 ---------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||