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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9826#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 20 consensus length = 1431 fasta sequence
[CCGATTCCGAACTGCAACAACCAAAACAATACGCCGCGTGTGTGTGTATGTGTCAGTAGTGCGG-TCAGGAGGGTTGGTAAAATTCGTTGAAAGCTGAAATGAAGGTGAAA-CGC-ACAGACCGTACACCGCCGAGTACGACAATGACCAGTCGGCACCGAATCTGCTCGTCTACCTGCTCTGGCTGCTGGTACACAAGCTCGTCACTATCGTCGAGCAGCTGATGCAGTCCCTGCGCCAACCGTTCTTCAGCAAACGGATCCGCAT-AAAGGCCCACCAGTACGCAGAGCACCAGCAGCAGCAGCTTCCCGCACCGGTGTCAAAGCTGTCGAAGGTGCCGAAACATCTGGTGGTGCTGCTAGGGCCGGAACCGCCCCTCTACCGCCAGCTGGCCCAGTTCATCTTCTGGTCGCTGGCGGCTGAGATCGAGTACGTTAGCTTCTACGATCACAACGGAACCATCAAGCGCAACTGCGAGGAAGTGAAGCGCTGCGTACGCG-AA-CACCGGTGGAAGGGAAGGACCGCATCGTTTGGCTGGAGCGCAGT-GGTAGCGGTGCGGAGGCGGACGATAG-CCCCCGCCAA-CCAGTCGGGAGTGGCCGCACAGTGGTGGTCGGCTTTCTGTCGCCCGAGGACGGCAAGCAGGGGCTGGTGAGCCTGTCCCGCTCGATCGGCGAGTCCGTGCGGCGGCGCGATCTGTACGCGGCCGACGTGAGCATCGAGCTGCT-GGACAGCCGGC-TGCAGGCGGCGCTCGGGGCCGTGCCCGATCCCGATCTGGCCCTCTA-CTTCGG-TGACGTCT-GCTCCACGTACGGGCTGCTGCCGTGGCAGATACGGCTGACGGAGTTTC-TGCCGCTCGGCACTCGGCTGCGGGACAGTACCGAGCGGGAGTTCGTGCGCTGCCTGCACCGGTACGCCAAGTGCGAGCAGCGCCT-GGGCACGTAGAGGCGTGGGC-CGCGGGCAGACACACCAATGTATATTTGTAGGACAATGCAAAAGACCGGACAGCGAATTCCTTCACCCTCAATTAGTGAATTAGTTTAGCCAAAATAGCATTTAAATTTCTGTTCG-TTTTAGGCAGGCGTTGGCATTTACAAAGACAACTATTTAGCGAAGAAATTAACTACCCCGCCCGTATGC---CCTTCTGTCCTTCTCGTTTGCCGTGAGTCGGTTGAATAATTGTGTGTGCGAAAGGCGGGAGTAATCATTCCAGCCTGTTAATTCTCCCGAGTGAGCGTTCATCCCCAAATGTATGACATTACATTAAATGCAATGTTTTAACCGGAAATTGGCACCGACCGGGGAACATTTTGCATTTGGTAAAAGAGCTGTGAGCAAAAGCAA-AAGGGTAATTGTGGGGGGAAAATAAAACGACCGTACGGAATA-TGTCTGC-ATGGTAGAGTAGCAAACAAAAAATCGATTTAAATACTAATTTCCCTA]
[+] EMBL BM586481 [CCGATTCCGAACTGCAACAACCAAAACAATACGCCGCGTGTGTGTGTATGTGTCAGTAGTGCGG TCAGGAGGGTTGGTAAAATTCGTTGAAAGCTGAAATGAAGGTGAAACCGC ACAGACCGTACACCGCCGAGTACGACAATGACCAGTCGGCACCGAATCTGCTCGTCTACCTGCTCTGGCTGCTGGTACACAAGCTCGTCACTATCGTCGAGCAGCTGATGCAGTCCCTGCGCCAACCGTTCTTCAGCAAACGGATCCGCAT AAAGGCCCACCAGTACGCAGAGCACCAGCAGCAGCAGCTTCCCGCACCGGTGTCAAAGCTGTCGAAGGTGCCGAAACATCTGGTGGTGCTGCTAGGGCC ]
[+] EMBL CNS0985Q [ GTGTGTATGTGTCAGTAGTGCGG TCAGGAGGGTTGGTAAAATTCGTTGAAAGCTGAAATGAAGGTGAAA CGCTACAGACCGTACACCGCCGAGTACGACAATGACCAGTCGGCACCGAATCTGCTCGTCTACCTGCTCTGGCTGCTGGTACACAAGCTCGTCACTATCGTCGAGCAGCTGATGCAGTCCCTGCGCCAACCGTTCTTCAGCAAACGGATCCGCAT AAAGGCCCACCAGTACGCAGAGCACCAGCAGCAGCAGCTTCCCGCACCGGTGTCAAAGCTGTCGAAGGTGCCGAAACATCTGGTGGTGCTGCTAGGGCCGGAACCGCCCCTCTACCGCCAGCTGGCCCAGTTCATCTTCTGGTCGCTGGCGGCTGAGATCGAGTACGTTAGCTTCTACGATCACAACGGAACCATCAAGCGCAACTGCGAGGAAGTGAAGCGCTGCGTACGCG AA CACCGGTGGAAGGGAAGGACCGCATCGTTTGGCTGGAGCGCAGT GGTAGCGGTGCGGAGGCGGACGATAG CCCCCGCCAA CCAGTCGGGAGTGGCCGCACAGTGGTGGTCGGCTTTCTGTCGCCCGAGGACGGCAAGCAGGGGCTGGTGAGCCTGTCCCGCTCGATCGGCGAGTCCGTGCGGCGGCGCGATCTGTACGCGGCCGACGTGAGCATCGAGCTGCT GGACAGCCGGC TGCAGGCGGCGCTCGGGGCCGTGCCCGATCCCGATCTGGCCCTCTA CTTCGG TGACGTCT GCTCCACGTACGGGCTGCTGCCGTGGCAGATACGGCTGACGGAGTTTC TGCCGCTCGGCACTCGGCTGCGGGACAGTACCGAGCGGGAGTTCGTGCGCTGCCTGCACCGGTACGCCAAGTGCGAGCAGCGCCT GGGCACGTAGAGGCGTGGGC CGCGGGCAGACACACCAATGTATATTTGTAGGACAATGCAAAAGACCGGACAGCGAATTCCTTCACC ]
[+] EMBL CNS08GR0 [ TGTCAGTAGTGCGG TCAGGAGGGTTGGTAAAATTCGTTGAAGGCTGCCATGAAGGTGAAA CGC ACAGACCGTACACCGCCGAGTACGACAATGACCAGTCGGCACCGAATCTGCTCGTCTACCTGCTCTGGCTGCTGGTACACAAGCTCGTCACTATCGTCGAGCAGCTGATGCAGTCCCTGCGCCAACCGTTCTTCAGCAAACGGATCCGCAT AAAGGCCCACCAGTACGCAGAGCACCAGCAGCAGCAGCTTCCCGCACCGGTGTCAAAGCTGTCGAAGGTGCCGAAACATCTGGTGGTGCTGCTAGGGCCGGAACCGCCCCTCTACCGCCAGCTGGCCCAGTTCATC ]
[+] EMBL CNS09H9Z [ AGTGCGGCTCAGGAGGGTTGGTAAAATTCGTTGAAAGCTGAAATGAAGGTGAAACCGC ACAGACCGTACACCGCCGAGTACGACAATGACCAGTCGGCACCGAATCTGCTCGTCTACCTGCTCTGGCTGCTGGTACACAAGCTCGTCACTATCGTCGAGCAGCTGATGCAGTCCCTGCGCCAACCGTTCTTCAGCAAACGGATCCGCAT AAAGGCCCACCAGTACGCAGAGCACCAGCAGCAGCAGCTTCCCGCACCGGTGTCAAAGCTGTCGAAGGTGCCGAAACATCTGGTGGTGCTGCTAGGGCCGGAACCGCCCCTCTACCGCCAGCTGGCCCAGTTCATCTTCTGGTCGCTGGCGGCTGAGATCGAGTACGTTAGCTTCTACGATCACAACGGAACCATCAAGCGCAACTGCGAGGAAGTGAAGCGCTGCGTACGCG AA CACCGGTGGAAGGGAAGGACCGCATCGTTTGGCTGGAGCGCAGT GGTAGCGGTGCGGAGGCGGACGATAG CCCCCGCCAA CCAGTCGGGAGTGGCCGCACAGTGGTGGTCGGCTTTCTGTCGCCCGAGGACGGCAAGCAGGGGCTGGTGAGCCTGTCCCGCTCGATCGGCGAGTCCGTGCGGCGGCGCGATCTGTACGCGGCCGACGTGAGCATCGAGCTGCT GGACAGCCGGC TGCAGGCGGCGCTCGGGGCCGTGCCCGATCCCGATCTGGCCCTCTA CTTCGG TGACGTCT GCTCCACGTACGGGCTGCTGCCGTGGCAGATACGGCTGACGGAGTTTC TGCCGCTCGGCACTCGGCTGCGGGACAATA ]
[+] EMBL CNS090J7 [ CAGGAGGGTTGGTAAAATTCGTTGAAAGCTGAAATGAAGGTGAAA CGC ACAGACCGTACACCGCCGAGTACGACAATGACCAGTCGGCACCGAATCTGCTCGTCTACCTGCTCTGGCTGCTGGTATACAAGCTCGTCACTATCGTCGAGCAGCTGATGCAGTCCCTGCGCCAACCGTTCTTCAGCAAACGGATCCGCAT AAAGGCCCACCAGTACGCAGAGCACCAGCAGCAGCAGCTTCCCGCACCGGTGTCAAAGCTGTCGAAGGTGCCGAAACATCTGGTGGTGCTGCTAGGGCCGGAACCGCCCCTCTACCGCCAGCTGGCCCAGTTCATCTTCTGGTCGCTGGCGGCTGAGATCGAGTACGTTAGCTTCTACGATCACAACGGAACCATCAAGCGCAACTGCGAGGAAGTGAAGCGCTGCGTACGCG AA CACCGGTGGAAGGGAAGGACCGCATCGTTTGGCTGGAGCGCAGT GGTAGCGGTGCGGAGGCGGACGATAG CCCCCGCCAA CCAGTCGGGAGTGGCCGCACAGTGGTGGTCGGCTTTCTGTCGCTCGAGGACGGCAAGCAGGGGCTGGTGAGCCTGTCCCGCTCGATCGGCGAGTCCGTGCGGCGGCGCGATCTGTACGCGGCCGACGTGAGCATCGAGCTGCT GGACAGCCGGC TGCAGGCGGCGCTCGGGGCCGTGCCCGATCCCGATCTGGCCCTCTA CTTCGG TGACGTCT GCTCCACGTACGGGCTGCTGCCGTGGCAGATACGGCTGACGGAGTTTC TGCCGCTCGGCACTCGGCTGCGGGACAGTACCGAGCGGGAGTTCGTGCGCTGCCTGCACCGGTACGCCAAGTGCGAGCAGCGCCTGGGGCACGTAGAGGCGTGGGC CGCGGGCAGACACACCAATGTATATTTGTAGGACAATGCAAAAGACCGGACAGCGAATTCCTTCAC ]
[+] EMBL CNS08JGU [ TTGGTAAAATTCGTTGAAAGCTGAAATGAAGGTGAAA CGCGACAGACCGTACACCGCCGAGTACGACAATGACCAGTCGGCACCGAATCTGCTCGTCTACCTGCTCTGGCTGCTGGTACACAAGCTCGTCACTATCGTCGAGCAGCTGATGCAGTCCCTGCGCCAACCGTTCTTCAGCAAACGGATCCGCAT AAAGGCCCACCAGTACGCAGAGCACCAGCAGCAGCAGCTTCCCGCACCGGTGTCAAAGCTGTCGAAGGTGCCGAAACATCTGGTGGTGCTGCTAGGGCCGGAACCGCCCCTCTACCGCCAGCTGGCCCAGTTCATCTTCTGGTCGCTGGCGGCTGAGATCGAGTACGTTAGCTTCTACGATCACAACGGAACCATCAAGCGCAACTGCGAGGAAGTGAAGCGCTGCGTACGCG AA CACCGGTGGAAGGGAAGGACCGCATCGTTTGGCTGGAGCGCAGT GGTAGCGGTGCGGAGGCGGACGATAG CCCCCGCCAA CCAGTCGGGAGTGGCCGCACAGTGGTGGTCGGCTTTCTGTCGCCCGAGGACGGCAAGCAGGGGCTGGTGAGCCTGTCCCGCTCGATCGGCGAGTCCGTGCGGCGGCGCGATCTGTACGCGGCCGACGTGAGCATCGAGCTGCT GGACAGCCGGC TGCAGGCGGCGCTCGGGGCCGTGCCCGATCCCGATCTGGCCCTCTA CTTCGG TGACGTCT GCTCCACGTACGGGCTGCTGCCGTGGCAGATACGGCTGACGGAGTTTC TGCCGCTCGGCACTCGGCTGCGGGACAGTACCGAGCGGGAGTTCGTGCGCTGCCTGCACCGGTACGCCAAGTGCGAGCAGCGCCT GGGgc ]
[+] EMBL CNS08LCU [ CAGTCCCTGCGCC ACCGTTCTTCAGCAAACGGATCCGCATGGGCGGCCCACCAGTACGCAGAGCGCCA CAGCAGCAGCTTCCCGCACCGGTGTCAAGGCTGTCGAAGGTGCCGAAACATCTGGTGGTGCTGCTGGGGCCGGAACCGCCCCTCTACCGCCAGCTGGCCCAGTTCATCTTCTGGTCGCTGGCGGCTGAGATCGAGTGCGTTA CTTCTACGATCACAACGGAACCATCAAGCGCAACTGCGAGGAAGTGAGGCGCTGCGTACGCG AA CACCGGTGGAGGGGAGGGACCGCATCGTTTGGCTGGAGCGCAGT GGTAGCGGTGCGGAGGCGGACGATAG CCCCCGCCAA CCAGTCGGGAGTGGCCGCACAGTGGTGGTCGGCTTTCTGTCGCCCGAGGACGGCAAGCAGGGGCTGGTGAGCCTGTCCCGCTCGATCGGCGAGTCCGTGCGGCGGCGCGATCTGTACGCGGCCGACGTGAGCATCGAGCTGCT GGACAGCCGGC TGCAGGCGGCGCTCGGGGCCGTG CCGATCCCGATCTGGCCCTCTA CTTCGG TGACGTCT GCTCCACGTACGGGCTGCTGCCGTGGCAGATACGGCTGACGGAGTTTC TGCCGCTCGGCACTCGGCTGCGGGACAGTACCGAGCGGGAGTTCGTGCGCTGCCTGCACCGGTACGCCAAGTGCGAGCAGCGCCT GGGCACGTAGAGGCGTGGGC CGCGGGCAGACACACCAATGTATATTTGTAGGACAATGCAAAAGACCGGACAACGAATTCCTTCACCCTCAATTAGTGAATTAGTTTAGCCAAAATAGCATTTAAATTTCTGTTCG TTTTAGGCAGGCGTTGGCATTTA ]
[+] EMBL CNS08PGZ [ CGGAT CGCAT GGGGGCCACCAGTACGCAGAGCGCCAG AGCAGCAGCTTCCCGCACCGGTGTCAAGGCTGTCGAAGGTGCCGAAACATCTGGTGGTGCTGCTGGGGCCGGAACCGCCCCTCTACCGCCAGCTGGCCCAGTTCATCTTCTGGTCGCTGGCGGCTGAGATCGAGTGCGTCA CTTCTACGATCACAACGGAACCATCAAGCGCAACTGCGAGGAAGTGAGGCGCTGCGTACGCG AA CACCGGTGGAGGGGAGGGACCGCATCGTTTGGCTGGAGCTTAGTGGGTAGCGGTGCGGAGGCGGACGATAG CCCCCGCCAA CCAGTCGGGAGTGGCCGCACAGTGGTGGTCGGCTTTCTGTCGCCCGAGGACGGCAAGCAGGGGCTGGTGAGCCTGTCCCGCTCGATCGGCGAGTCCGTGCGGCGGCGCGATCTGTACGCGGCCGACGTGAGCATCGAGCTGCT GGACAGCCGGC TGCAGGCGGCGCTCGGGGCCGTG CCGATCCCGATCTGGCCCTCTACCGCCGG TGACGTCT GCTCCACGTACGGGCTGCTGCCGTGGCAGATACGGCTGACGGAGTTTC TGCCGCTCGGCACTCGGCTGCGGGACAGTACCGAGCGGGAGTTCGTGCGCTGCCTGCACCGGTACGCCAAGTGCGAGCAGCGCCT GGGCACGTAGAGGCGTGGGC CGCGGGCAGACACACCAATGTATATTTGTAGGACAATGCAAAAGACCGGACAGCGAATTCCTTCACCCTCAATTAGTGAATTAGTTTAGCCAAAATAGCATTTAAATTTCTGTTCG TTTT ]
[+] EMBL CNS096BH [ TACGCAGAGCACCAGTTTTAGCAGCTTCCCGGACCGGTGTCAAAGCTGTCGAAGGTGCCGAAACATCTGGTGGTGCTGCTAGGGCCGGAACCGCCCCTCTACCGCCAGCTGGCCCAGTTCATCTTCTGGTCGCTGGCGGCTGAGATCGAGTACGTTAGCTTCTACGATCACAACGGAACCATCAAGCGCAACTGCGAAGAAG ]
[-] EMBL CNS095P0 [ GAGGAAGTGAAGCGCTGCGTACGCG AAGCACCGGTGGAAGGGAAGGACCGCATCGTTTGGCTGGAGCGCAGT GGTAGCGGTGCGGAGGCGGACGATAG CCCCCGCCAA CCAGTCGGGAGTGGCCGCACAGTGGTGGTCGGCTTTTTGTCGCCCGAGGACGGCAAGCAGGGGCTGGTGAGCCTGTCCCGCTCGATCGGCGAGTCCGTGCGGCGGCGCGATCTTTACGCGGCCGACGTGAGCATCGAGCTGCT GGACAGCCGGC TGCAGGCGGCGCTCGGGGCCGTGCCCGATCCCGATCTGGCCCTCTA CTTCGG TGACGTCT GCTCCACGTACGGGCTGCTGCCGTGGCAGATACGGCTGACGGAGTTTC TGCCGCTCGGCACTCGGCTGCGGGACAGTACCGAGCGGGAGTTCGTGCGCTGCCTGCACCGGTACGCCAAGTGCGAGCAGCGCCT GGGCACGTAGAGGCGTGGGC CGCGGGCAGACACACCAATGTATATTTGTAGGACAATGCAAAAGACCGGACAGCGAATTCCTTCACCCTCAATTTTTGAATTAGTTTAGCCAAAATAGCATTTAAATTTCTGTTCG TTTTAGGCAGGCGTTGGCATTTACAAAGACGACTATTTAGCGAAGAAATTAACTACCCCGCCCGTATGCGCGCGTTCTGTCCTTC ]
[+] EMBL BX469488 [ GAATCGC ACG AGGTGTAAGCA CGGTGGAAGGGAAGGACCGCATCGTTTGGCTGGAGCGCAGT GGTAGCGGTGCGGAGGTGGACGATAG CCCCCGCCAA CCAGTCGGGAGTGGCCGCACAGTGGTGGTCGGCTTTCTGTCGCCCGAGGACGGCAAGCAGGGGCTGGTGAGCCTGTCCCGCTCGATCGGCGAGTCCGTGCGGCGGCGCGATCTGTACGCGGCCGACGTGAGCATCGAGCTGCTGGGACAGCCGGCGTGCAGGCGGCGCTCGGGGCCGTGCCCGATCCCGATCTGGCCCTCTA CTTCGGNGGACGTCTNGGTCCANGTA ]
[-] EMBL CNS08LCV [ aagGCGC GCGTACGCG AAGCACCGGTGGAGGGGAGGGACCGCATCGTTTGGCTGGAGCGCAGT GGTAGCGGTGCGGAGGCGGACGATAG CCCCCGCCAA CCAGTCGGGAGTGGCCGCACAGTGGTGGTCGGCTTTCTGTCGCCCGAGGACGGCAAGCAGGGGCTGGTGAGCCTGTCCCGCTCGATCGGCGAGTCCGTGCGGCGGCGCGATCTGTACGCGGCCGACGTGAGCATCGAGCTGCT GGACAGCCGGC TGCAGGCGGCGCTCGGGGCCGTGCCCGATCCCGTTCTGGCCCTCTA CTTCGG TGACGTCT GCTCCACGTACGGGCTGCTGCCGTGGCAGATACGGCTGACGGAGTTTC TGCCGCTCGGCACTCGGCTGCGGGACAGTACCGAGCGGGAGTTCGTGCGCTGCCTGCACCGGTACGCCAAGTGCGAGCAGCGCCT GGGCACGTAGAGGCGTGGGC CGCGGGCAGACACACCAATGTATATTTGTAGGACAATGCAAAAGACCGGACAACGAATTCCTTCACCCTCAATTAGTGAATTAGTTTAGCCAAAATAGCATTTAAATTTCTGTTCG TTTTAGGCAGGCGTTGGCATTTACAAAGACAACTATTTAGCGAAGAAATTAACTACCCCGCCCGTATGC CCTTCTGTCCTTCTCGTTTGCCGTGAGTCGGTTGAATAATTGTGTGTGCGAAAGGCGGGAGTAATCATTCCAGCCTGTTAATTCTCCCGAGTGAGCGTTCATCCCCAAATGTATGACATTACATTAAATGCAATGTTTTAACCGGAAATTGGCACCGACCGGGGAACATTTTGCATTTGGTAAAAGAGCTGTGAGCAAAAGCAA AAGGGTAATTGTGGGGGGAAAATAAAACGACCGTACGGAATA TGTCTGC ATGGTAGAG ]
[+] EMBL BX620043 [ AGGACCGCATCGTTTGGCTGGAGCGCAGT GGTAGCGGTGCGGAGGTGGACGATAG CCCCCGCCAA CCAGTCGGGAGTGGCCGCACAGTGGTGGTCGGCTTTCTGTCGCCCGAGGACGGCAAGCAGGGGCTGGTGAGCCTGTCCCGCTCGATCGGCGAGTCCGTGCGGCGGCGCGATCTGTACGCGGCCGACGTGAGCATCGAGCTGCT GGACAGCCGGC TGCAGGCGGCGCTCGGGGCCGTGCCCGATCCCGATCTGGCCCTCTA CTTCGG TGACGTCT GCTCCACGTACGGGCTGCTGCCGTGGCAGATACGGCTGACGGAGTTTC TGCCGCTCGGCACCCGGCTGCGGGACAGTACCGAGCGGGAGTTCGTGCGCTGCCTGCACCGGTACGCCAAGTGCGAGCAGCGCCT GGGCACGTAGAGGCGTGGGC CGCGGGCAGACACACCAATGTATATTTGTAGGACAATGCAAAAGACCGGACAGCGAATTCCTTCACCCTCAATTAGTGAATTAGTTTAGCCAAAATAGCATTTAAATTTCTGTTCG TTTTANGCAGGCGTTGGCA ]
[-] EMBL CNS090J8 [ CGGTGCGGAGGCGGACGATAG CCCCCGCCAA CCAGTCGGGAGTGGCCGCACAGTGGTGGTCGGCTTTTTTTCGCCCGAGGACGGCAAGCAGGGGCTGGTGAGCCTGTCCCGCTCGATCGGCGAGTCCGTGCGGCGGCGCGATCTGTACGCGGCCGACGTGAGCATCGAGCTGCT GGAAAGCCGGC TGCAGGCGGCGCTCGGGGCCGTGCCCGATCCCGATCTGGCCCTCTA CTTCGG TGACGTCT GCTCCACGTACGGGCTGCTGCCGTGGCAGATACGGAAAACGGAGTTTC TGCCGCTCGGCACTCGGCTGCGGGACAGTACCGAGCGGGAGTTCGTGCGCTGCCTGCACCGGTACGCCAAGTGCGAGCAGCGCCT GGGCACGTAGAGGCGTGGGC CGCGGGCAGACACACCAATGTATATTTGTAGGACAATGCAAAAGACCGGACAGCGAATTCCTTCACCCTCAATTAGTGAATTAGTTTAGCCAAAATAGCATTTAAATTTCTGTTCG TTTTAGGCAGGGGTTGGGATTTAAAAAGACAACTATTTAGCGAAGAAATT ]
[-] EMBL CNS09HA0 [ GGAGGCGGACGATAGCCCCCCGCCAACCCAGTCGGGAGTGGCCGCACAGTGGTGGTCGGCTTTCTGTCGCCCGAGGACGGCAAGCAGGGGCTGGTGAGCCTGTCCCGCTCGATCGGCGAGTCCGTGCGGCGGCGCGATCTGTACGCGGCCGACGTGAGCATCGAGCTGCT GGACAGCCGGC TGCAGGCGGCGCTCGGGGCCGTGCCCGATCCCGATCTGGCCCTCTA CTTCGG TGACGTCT GCTCCACGTACGGGCTGCTGCCGTGGCAGATACGGCTGACGGAGTTTC TGCCGCTCGGCACTCGGCTGCGGGACAGTACCGAGCGGGAGTTCGTGCGCTGCCTGCACCGGTACGCCAAGTGCGAGCAGCGCCT GGGCACGTAGAGGCGTGGGC CGCGGGCAGACACACCAATGTATATTTGTAGGACAATGCAAAAGACCGGACAGCGAATTCCTTCACCCTCAATTAGTGAATTAGTTTAGCCAAAATAGCATTTAAATTTCTGTTCG TTTTAGGCAGGCGTTGGCATTTACAAAGACAACTATTTAGCGAAGAAATTAACTACCCCGCCCGTATGC CCTTCTGTCCTTCTCGTTTGCCGTGAGTCGGTTGAATAATTGTGTGTGCGAAAGGCGGGAGTAATCATTCCAGCCTGTTAATTCTCCCGAGTGAGCGTTCATCCCCAAATGTATGACATTACATTAAATGCAATGTTTTAACCGGAAATTGGCACCGACCGGGGAACATTTTGCATTTGGTAAAAGAGCTGTGAGCAAAAGCAAGAAGGGTAATTGTGGGGGGAAAATAAAACGACCGTACGGAATA TG CTGC ]
[-] EMBL CNS08JGV [ CAGTGGTGGTCGGCTTTTTTTCGCCCGAGGACGGCAAGCAGGGGCTGGTGAGCCTGTCCCGCTCGATCGGCGAGTCCGTGCGGCGGCGCGATCTGTACGCGGCCGACGTGAGCATCGAGCTGTT GGACAGCCGGC TGCAGGCGGCGCTCGGGGCCGTGCCCGATCCCGATCTGGCCCTCTA CTTCGG TGACGTCT GCTCCACGTACGGGCTGCTGCCGTGGCAGATACGGCTGACGGAGTTTCTTGCCGCTCGGCACTCGGCTGCGGGACAGTACCGAGCGGGAGTTCGTGCGCTGCCTGCACCGGTACGCCAAGTGCGAGCAGCGCCT GGGCACGTAGAGGCGTGGGCGCGCGGGCAGACACACCAATGTATATTTGTAGGACAATGCAAAAGACCGGACAGCGAATTCCTTCACCCTCAATTAGTGAATTAGTTTAGCCAAAATAGCATTTAAATTTCTGTTCG TTTTAGGCAGGCGTTGGCATTTACAAAGACAACTATTTAGCGAAGAAATTAACTACCCCGCCCGTATGC CCTTCTGTCCTTCTCGTTTGCCGTGAGTCGGTTGAATAATTGTGTGTGCGAAAGGCGGGAGTAATCATTCCAGCCTGTTAATTCTCCCGAGTGAGCGTTCATCCCCAAATGTATGACATTACATTAAATGCAATGTTTTAACCGGAAATTGGCACCGACCGGGGAACATTTTGCATTTGGTAAAAGAGCTGTGAGCAAAAGCAA AAGGGTAATTGTGGGGGGAAAATAAAACGACCGTACGGAATA TGTCTGC ATGGTAGA ]
[-] EMBL CNS08PH0 [ GCCTGTCCCGCTCGATCGGCGAGTCCGTGCGGCGGCGCGATCTGTACGCGGCCGACGTGAGCATCGAGCTGCT GGACAGCCGGC TGCAGGCGGCGCTCGGGGCCGTGCCCGATCCCGATCTGGCCCTCTA CTTCGG TGACGTCT GCTCCACGTACGGGCTGC GCCGTGGCAGATACGGCTGACGGAGTTTC TGCCGCTCGGCACTCGGCTGCGGGACAGTACCGAGCGGGAGTTCGTGCGCTGCCTGCACCGGTACGCCAAGTGCGAGCAGCGCCT GGGCACGTAGAGGCGTGGGC CGCGGGCAGACACACCAATGTATATTTGTAGGACAATGCAAAAGACCGGACAGCGAATTCCTTCACCCTCAATTAGTGAATTAGTTTAGCCAAAATAGCATTTAAATTAAAGTTCG TTTTAGGCAGGCGTTGGCATTTACAAAGACAACTATTTAGCGAAGAAATTAACTACCCCGCCCGTATGC CCTTCTGTCCTTCTCGTTTGCCGTGAGTCGGTTGAATAATTGTGTGTGCGAAAGGCGGGAGTAATCATTCCAGCCTGTTAATTCTCCCGAGTGAGCGTTCATCCCCAAATGTATGACATTACATTAAATGCAATGTTTTAACCGGAAATTGGCACCGACCGGGGAACATTTTGCATTTGGTAAAAGAGCTGTGAGCAAAAGCAA AAGGGTAATTGTGGGGGGAAAATAAAACGACCGTACGGAATA TGTCTGC ATTGTGGAGTAG ]
[-] EMBL CNS0985R [ GGGAGTTCGTGCGCTGCCTGCACCGGTACGCCAAGTGCGAGCAGCGCCT GGGCACGTAGAGGCGTGGGC CGCGGGCAGACACACCAATGTATATTTGTAGGACAATGCAAAAGACCGGACAGCGAATTCCTTCACCCTCAATTAGTGAATTAGTTTAGCCAAAATAGCATTTAAATTTCTGTTCG TTTTAGGCAGGCGTTGGCATTTACAAAGACAACTATTTAGCGAAGAAATTAACTACCCCGCCCGTATGC CCTTCTGTCCTTCTCGTTTGCCGTGAGTCGGTTGAATAATTGTGTGTGCGAAAGGCGGGAGTAATCATTCCAACCTGTTAATTCTCCCGAGTGAGCGTTCATCCCCAAATGTATGACATTACATTAAATGCAATGTTTTAACCGGAAATTGGCACCGACCGGGGAACATTTTGCATTTGGTAAAAGAGCTGTGAGCAAAAGCAA AAGGGTAATTGTGGGGGGAAAATAAAACGACCGTACGGAATA T ]
[-] EMBL CNS096BI [ tctTGTTCGTTTTTAGGCAGGCGTTGGCATTTACAAAGACAACTATTTAGCGAAGAAATTAACTACCCCGCCCGTATGC CCTTCTGTCCTTCTCGTCTGCCGTGAGTCGGTTGAATAATTGTGTGTGCGAAAGGCGGGAGTAATCATTCCAGCCTGTTAATTTTCCCGAGTGAGCGTTCATCCCCAAATGTATGACATTACATTAAATGCAATGTTTTCCCCGGAAATTGGCACCGACCGGGGAACATTTTGCATTTGGTAAAAGAGCTGTGAGCAAAAGCAA AAGGGTAATTGTGGGGGGAAAATAAAACGACCGTACGGAATATTTTATTT ATGGTAGAGCAACAAACAAAAAATCGATTTAAATACTAATTTCCCTA]
[-] EMBL CNS08GR1 [ CATTACATTAAATGCAATGTTTTAACCGGAAATTGGCACCGACCGGGGAACATTTTGCATTTGGTAAAAGAGCTGTGGGGGAAAGCAA AAGGGTAATTGTGGGGGGAAAATAAAACGACCGTACGGAATA TGTCTGCAATGGTA ]
consensusID : consensus_9826#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 657 fasta sequence
[TAGCAGAATCCCGAGGTTTGTAAACGCACAGACCGTACACCTGCCGAGTACGANNATGGCCAGTCGGCACCGAATCTGCTCGTCTACCTGCTCTGGCTGCTGGTACACAAGCTCGTCACTATACGTCGAGCAGCTGATGCAGTACCTGTGCCAACCTGTTCTATCAGCAAACTGTGATACTGCATAAAGTGGCCACCAGTACTGCAGAGCAACAGGCAGCAGCAGCTNTCCCGCACCGGTGTTCAAAGCTGTACGAAAGTGTGCTGAAAAACATACTTGGGTGGTTGCTTGCTATGGCCTGGAACTGACCCTCTACCTGGCAGCGTTGGCCCAGTNCATCTTCTGGGTACGCATGGCGGCGAGAGATCGCAGTACGTTAGCTTCTACGATCACAACTGGAACCATACCAAGCGCAAGCTGCGAGTGAAGTGAAGCGCTGCGTACGCGGAAGNCACCGGATTGTGAACTGTGGGGANACGTGGACCCGGCATTACGTATATAGGGCTTGGNAGGCGCCACNGTTGGGTAAAGACNGGTAGACGNGACGGCCGGANCGAATAAGGCNCCCCGCNAAAACCAAGATGACGCGAAAGTTGGCACGAACAAGCAGGGNTGGGTCCCGGGCTTATATACTTGTAACGACCCGANTGAACGGGN]
[+] EMBL AL929990 [TAGCAGAATCCCGAGGTTTGTAAACGCACAGACCGTACACCTGCCGAGTACGANNATGGCCAGTCGGCACCGAATCTGCTCGTCTACCTGCTCTGGCTGCTGGTACACAAGCTCGTCACTATACGTCGAGCAGCTGATGCAGTACCTGTGCCAACCTGTTCTATCAGCAAACTGTGATACTGCATAAAGTGGCCACCAGTACTGCAGAGCAACAGGCAGCAGCAGCTNTCCCGCACCGGTGTTCAAAGCTGTACGAAAGTGTGCTGAAAAACATACTTGGGTGGTTGCTTGCTATGGCCTGGAACTGACCCTCTACCTGGCAGCGTTGGCCCAGTNCATCTTCTGGGTACGCATGGCGGCGAGAGATCGCAGTACGTTAGCTTCTACGATCACAACTGGAACCATACCAAGCGCAAGCTGCGAGTGAAGTGAAGCGCTGCGTACGCGGAAGNCACCGGATTGTGAACTGTGGGGANACGTGGACCCGGCATTACGTATATAGGGCTTGGNAGGCGCCACNGTTGGGTAAAGACNGGTAGACGNGACGGCCGGANCGAATAAGGCNCCCCGCNAAAACCAAGATGACGCGAAAGTTGGCACGAACAAGCAGGGNTGGGTCCCGGGCTTATATACTTGTAACGACCCGANTGAACGGGN]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9826#0 CCGATTCCGAACTGCAACAACCAAAACAATACGCCGCGTGTGTGTGTATGTGTCAGTAGT 60
consensus_9826#1 ------------------------------------------------------------
consensus_9826#0 GCGGTCAGGAGGGTTGGTAAAATTCGTTGAAAGCTGAAATGAAGGTGAAACGCACAGACC 120
consensus_9826#1 -----------------------TAGCAGAATCCCGAGGTTTGT---AAACGCACAGACC 34
* * *** * ** * *************
consensus_9826#0 GTACACC-GCCGAGTACGACAATGACCAGTCGGCACCGAATCTGCTCGTCTACCTGCTCT 179
consensus_9826#1 GTACACCTGCCGAGTACGANNATGGCCAGTCGGCACCGAATCTGCTCGTCTACCTGCTCT 94
******* *********** *** ***********************************
consensus_9826#0 GGCTGCTGGTACACAAGCTCGTCACTAT-CGTCGAGCAGCTGATGCAGTCCCTGCGCCAA 238
consensus_9826#1 GGCTGCTGGTACACAAGCTCGTCACTATACGTCGAGCAGCTGATGCAGTACCTGTGCCAA 154
**************************** ******************** **** *****
consensus_9826#0 CC-GTTCT-TCAGCAAAC---GGATCCGCATAAAG-GCCCACCAGTAC-GCAGAGCACCA 291
consensus_9826#1 CCTGTTCTATCAGCAAACTGTGATACTGCATAAAGTGGCCACCAGTACTGCAGAGCAACA 214
** ***** ********* * * ******** * ********** ******** **
consensus_9826#0 G-CAGCAGCAGCTT-CCCGCACCGGTGT-CAAAGCTGT-CGAAGGTG--CCGAAACATCT 345
consensus_9826#1 GGCAGCAGCAGCTNTCCCGCACCGGTGTTCAAAGCTGTACGAAAGTGTGCTGAAAAACAT 274
* *********** ************* ********* **** *** * **** * *
consensus_9826#0 -----GGTGGTG--CTGCTAGGGCC-GGAACCGCCCCTCTACC-GCCAGC--TGGCCCAG 394
consensus_9826#1 ACTTGGGTGGTTGCTTGCTATGGCCTGGAACTGACCCTCTACCTGGCAGCGTTGGCCCAG 334
****** ***** **** ***** * ********* * **** ********
consensus_9826#0 TTCATCTTCTGGTCGC---TGGCGGCT-GAGATCG-AGTACGTTAGCTTCTACGATCACA 449
consensus_9826#1 TNCATCTTCTGGGTACGCATGGCGGCGAGAGATCGCAGTACGTTAGCTTCTACGATCACA 394
* ********** * ******* ******* ************************
consensus_9826#0 AC-GGAACCAT--CAAGCGCAA-CTGCGAG-GAAGTGAAGCGCTGCGTACGCGAACACCG 504
consensus_9826#1 ACTGGAACCATACCAAGCGCAAGCTGCGAGTGAAGTGAAGCGCTGCGTACGCGGAAGNCA 454
** ******** ********* ******* ********************** * *
consensus_9826#0 GTGGAAGGGAAGGACCGCATCGTTTGGCTGGAGCGCAGTGGTAGCGGTGCGGAGGCGGAC 564
consensus_9826#1 CCGGATTGTGA--ACTG--TGGGGANACGTGGACCCGGCATTACGTATATAGGGCTTGGN 510
*** * * ** * * * * * * * * ** * * * *
consensus_9826#0 GATAGCCCCCGCCAACCAGTCGGGAGTGGCCGCACAGTGGTGGTCGGCTTTCTGTCGCCC 624
consensus_9826#1 AGGCGCCACNGTTGGGTAAAGACNGGTAGACGNG-ACGGCCGGANCGAATAAGGCNCCCC 569
*** * * * ** * ** * * ** * * * ***
consensus_9826#0 GAGGACGGCAAGCAGGGGCTGGTGAGCCTGTCCCGCTCGATCGGCGAGTCCGTGCGGCGG 684
consensus_9826#1 GCNAAAACCAAGATGACGCG---AAAGTTGGCACGAACAA---GCAGGGNTGGGTCCCGG 623
* * **** * ** * ** * ** * * ** * * * ***
consensus_9826#0 CGCGATCTGTACGCGGCCGACGTGAGC-ATCGAGCTGCTGGACAGCCGGCTGCAGGCGGC 743
consensus_9826#1 GCTTATATACTTGTAAC-GACCCGANTGAACGGGN------------------------- 657
** * * * *** ** * ** *
consensus_9826#0 GCTCGGGGCCGTGCCCGATCCCGATCTGGCCCTCTACTTCGGTGACGTCTGCTCCACGTA 803
consensus_9826#1 ------------------------------------------------------------
consensus_9826#0 CGGGCTGCTGCCGTGGCAGATACGGCTGACGGAGTTTCTGCCGCTCGGCACTCGGCTGCG 863
consensus_9826#1 ------------------------------------------------------------
consensus_9826#0 GGACAGTACCGAGCGGGAGTTCGTGCGCTGCCTGCACCGGTACGCCAAGTGCGAGCAGCG 923
consensus_9826#1 ------------------------------------------------------------
consensus_9826#0 CCTGGGCACGTAGAGGCGTGGGCCGCGGGCAGACACACCAATGTATATTTGTAGGACAAT 983
consensus_9826#1 ------------------------------------------------------------
consensus_9826#0 GCAAAAGACCGGACAGCGAATTCCTTCACCCTCAATTAGTGAATTAGTTTAGCCAAAATA 1043
consensus_9826#1 ------------------------------------------------------------
consensus_9826#0 GCATTTAAATTTCTGTTCGTTTTAGGCAGGCGTTGGCATTTACAAAGACAACTATTTAGC 1103
consensus_9826#1 ------------------------------------------------------------
consensus_9826#0 GAAGAAATTAACTACCCCGCCCGTATGCCCTTCTGTCCTTCTCGTTTGCCGTGAGTCGGT 1163
consensus_9826#1 ------------------------------------------------------------
consensus_9826#0 TGAATAATTGTGTGTGCGAAAGGCGGGAGTAATCATTCCAGCCTGTTAATTCTCCCGAGT 1223
consensus_9826#1 ------------------------------------------------------------
consensus_9826#0 GAGCGTTCATCCCCAAATGTATGACATTACATTAAATGCAATGTTTTAACCGGAAATTGG 1283
consensus_9826#1 ------------------------------------------------------------
consensus_9826#0 CACCGACCGGGGAACATTTTGCATTTGGTAAAAGAGCTGTGAGCAAAAGCAAAAGGGTAA 1343
consensus_9826#1 ------------------------------------------------------------
consensus_9826#0 TTGTGGGGGGAAAATAAAACGACCGTACGGAATATGTCTGCATGGTAGAGTAGCAAACAA 1403
consensus_9826#1 ------------------------------------------------------------
consensus_9826#0 AAAATCGATTTAAATACTAATTTCCCTA 1431
consensus_9826#1 ----------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||