These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9841#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 19 consensus length = 1754 fasta sequence [CCGAAATACGCAAAACACGCAAAAAGGGGAAAAATTTTGCTCACAGAACAAGGCGAGCCCAAATCCAAAATCTTCCCCGCTGCAGCTCCC-TTTTC-CGTCTGGTTCCGTGTGCTTTGGTTCATTCCGTGCTGTCCCCTTTCGTGCGTGAGTAGCCAGGATGGGAAACGCAGGTAGCAATTTGCCAAGGGAGCGTCATAAATCCGGATCGAATGATCCCATCCCGGGCTCGCCGATGAAGGACGACCAGGCGTTCGTGTTTGACCGCAAGCCACACATCCACGGGTATCCGTTCGCGACGGAGGAGGAGGTGGAACCGTACGGGTACTCCAAGTCCGTGCCCGATCCAGAGTTTGCCCGTGAGCCGCGGAAGCGTTCCAGCACCATGTCCGAGGGAACGACCCCATCCGAGGCGCCTGGAGGTGGAGCGGGCGGTGGTGGCGGTGGGCCGGATGATGATGCACAGCAGGAGGAGGAGCAGTCCAGTACGCTGCCGACCGTGTTCAAGTGGGACGGCGGTGGCAAGCAGGTGTTTATTAGCGGCACGTTCTCGCAGTGGAAGGTACTGCCGATGGTGAAATCGCACGCCGACTTCGTGACCATCATCAACATCCCGGAGGGGGACCATCAGTACAAGTTTCTGGTCGATGGCGAATGGAAGCACGATCCGAAGCTGAAAAATGTAGAAAATGACGCTGGCACCACGAACAACCTCGTCACCGTGCGCCAGTCCGACTTTGAAGTATTCCAAGCGCTGGCCAAGGACAGCGAGGACACGGGCAAGGACGAGTCGAAGGAATGGGGCCAGGACATACCGACGGCCAGACCGTGGGGCAAGGAATCGGGCCCGCCCGTACTGCCGCCCCATCTGCTGCAGGTCATTCTCAACAAGGACACTCCACTGTCGTGCGAACCGACCCTGCTGCCCGAGCCGAACCACGTCATGCTGAATCACCTGTACGCCCTTTCGATCAAGGACGGTGTCATGGTGCTGAGCGCGACGCATCGCTACCGGAAGAAATACGTCACCACGCTGCTCTACAAACCGATCTAGATGCTTGTGGCCGCGGGTATGTGTGCGGGAGAAGGGTGTAGCCTATTCATACCATTACGCGAGCAGCGTGCCTTGGGCGCGATAT-CTTATTAGATAGGGGGGGGGGACAGGGAACTACTAATGGGGATAAACCAAAACGATTGAAAACCAAAGCTGAATAAGCTTACACACAACGACAACCCATTGTGTGGTTAATCCATCCGCTGGGGCCACAGAAAC------ACACAAACGTACACAGATACATTCATCATTGGATTGGTTCCTGGTTGGTTGGTTGCTGTGCTGTGTGGAGG-AAGGATAGTTTGACCGCCGCGTGGAGGTCACACAGCTAAATGTA-TTTTTTTTAAATTCCTCACACACAGTTCGTTGATTATATATTGCGTAGTTTGTAGGTAAGACTAGGAAAAAAATGGCTTGGAAAAATTAACTGTAGAACAAAAAAGAAGACGGGAACTGGTTTGGAGAGAATGCACGAGA--AGAGAGAGAGGACGATTTACGCGACAGTCGCAGCCATGGTAGAGAGAAATATTTTAA-TTGCTTTTCTGTTTTCGCCGTTTCCCAATCGATCGAAAACGACGACGACTGGCCGGTGGCGATAC--AA--AC-ATATTTTACGAATCTTTCGTGTAAATACGCTGGATAAAG-CTGGTGTTAATGAAAC-GATGAATAAAGTTTTTTCGAACCCTCAAAAAAAAAAAAAATAGAAAAA] [+] EMBL BM642742 [CCGAAATACGCAAAACACGCAAAAAGGGGAAAAATTTTGCTCACAGAACAAGGCGAGCCCAAATCCAAAATCTTCCCCGCTGCAGCTCCCATTTTCTGGTCTGGTTCCGTGTGCTTTGGTTCGTTCCGTGCTGCCCCCTTTCGTGCGTGAGTAGCCAGGATGGGAAACGCAGGTAGCAATTTGCCAAGGGAGCGTCATAAATCCGGATCGAATGATCCCATCCCGGGCTCGCCGATGAAGGACGACCAGGCATTCGTGTTTGACCGCAAGCCACACATCCACGGGTATCCGTTCGCGACGGAGGAGGAGGTGGAACCGTACGGGTACTCCAAGTCCGTGCCCGATCCAGAGTTTGCCCGCGAGCCGCGGAAGCGTTCCAGCACCATGTCCGAGGGAACGACCCCATCCGAGGCGCCTGGAGGTGGAGCGGGCGGTGGTGGCGGTGGGCCGGATGATGATGCACAGCAGGAGGAGGAGCAGTCCAGTACGCTGCCGACCGTGTTCAAGTGGGACGGCGGTGGCAAGCAGGTGTTTATTAGCGGCACATTCTCGCAGTGGAAGGTACTGCCGATGGTGAAATCGCACGCCGACTTCGTGACCATCATCAACATCCCGGAGGGGGACCATCAGTACAAGTTTCTGGTCGATGGCGAATGGAAGCACGATCCGAAGCTGAAAAATGTTGAAAATGACGC ] [+] EMBL CNS08QMA [ cgAAAACACGCAAAAAGGGGAAAAATTTTGCTCACAGAACAAGGCGAGCCCAAATCC AATCTTCCCCGCTGCAGCTCCC TTTTC CGTCTGGTTCCGTGTGCTTTGGTTCATTCCGTGCTGTCCCCTTTCGTGCGTGAGTAGCCAGGATGGGAAACGCAGGTAGCAATTTGCCAAGGGAGCGTCATAAATCCGGATCGAATGATCCCAT CCGGGCTCGCCGATGAAAGACGA CAGGCGTTCGTGTT ] [+] EMBL CNS08Z17 [ ACACGCAAAAAGGGGAAAAATTTTGCTCACAGAACAAGGCGAGCCCAAATCCAAAATCTTCCCCGCTGCAGCTCCC TTTTC CGTCTGGTTCCGTGTGCTTTGGTTCATTCCGTGCTGTCCCCTTTCGTGCGTGAGTAGCCAGGATGGGAAACGCAGGTAGCAATTTGCCAAGGGAGCGTCATAAATCCGGATCGAATGATCCCATCCCGGGCTCGCCGATGAAGGACGACCAGGCGTTCGTGTTTGACCGCAAGCCACACATCCACGGGTATCCGTTCGCGACGGAGGAGGAGGTGGAACCGTACGGGTACTCCAAGTCCGTGCCCGATCCAGAGTTTGCCCGTGAGCCGCGGAAGCGTTCCAGCACCATGTCCGAGGGAACGACCCCATCCGAGGCGCCTGGAGGTGGAGCGGGCGGTGGTGGCGGTGGGCCGGATGATGATGCACAGCAGGAGGAGGAGCAGTCCAGTACGCTGCCGACCGTGTTCAAGTGGGACGGCGGTGGCAAGCAGGTGTTTATTAGCGGCACGTTCTCGCAGTGGAAGGTACTGCCGATGGTGAAATCGCACGCCGACTTCGTGACCATCATTAACATCCCGGA GGAGACCATCAGTACAAGTTTCTGGTCGATGGCGAATGGAAGCACGATCCGAAGCTGAAAAATGTAGAAAATGACGCTGGCACCACGAACAACCTCGTCACCGTGCGCCAGTCCGACTTTGAAGTATTCCAAGCGCTGGCCAAGGACAGCGAGGACACGGGCAAGGACGAGTCGAAGGAATGGGGCCAGGACATACCGACGGCCAGACCGTGGGGCAAGGAATCGGGCCCGCCCGTACTGCCGCCCCATCTGCTGCAGGTCATTCTCAACAAGGACACTCCACTGTCGTGCGAACCGACCCTGCTGCCCGAGCCGAACCACGTCATGCTGAATCACCTGTACGCCCTTTCGATCAA ] [+] EMBL BM621837 [ ccgATTTTGCTCACAGAACAAGGCGAGCCCAAATCCAAAATCTTCCCCGCTGCAGCTCCCATTTTCTGGTCTGGTTCCGTGTGCTTTGGTTCGTTCCGTGCTGCCCCCTTTCGTGCGTGAGTAGCCAGGATGGGAAACGCAGGTAGCAATTTGCCAAGGGAGCGTCATAAATCCGGATCGAATGATCCCATCCCGGGCTCGCCGATGAAGGACGACCAGGCATTCGTGTTTGACCGCAAGCCACACATCCACGGGTATCCGTTCGCGACGGAGGAGGAGGTGGAACCGTACGGGTACTCCAAGTCCGTGCCCGATCCGGAGTTTGCCCGCGAGCCGCGGAAGCGTTCCAGCACCATGTCCGAGGGAACGACCCCATCCGAGGCGCCTGGAGGTGGAGCGGGCGGTGGTGGCGGTGGGCCGGATGATGATGCACAGCAGGAGGAGGAGCAGTCCAGTACGCTGCCGACCGTGTTCAAGTGGGACGGCGGTGGCAAGCAGGTGTTTATTAGCGGCACGTTCTCGCAGTGGAAGGTACTGCCAATGGTGAAATCGCACGCCGACTTCGTGACCATCATCAACATCCCGGAGGGAGACCATCAGTACAAGTTTCTGGTCGATGGTGAATGGAAGCACGATCCGAAGCTGAAAAATGTAGAAAATGACGCTGGCACCACGAACAACCTCGTCACCGTGCGCC ] [+] EMBL AGA285008 [ AAATCTTCCCCGCTGCAGCTCCC TTTTC CGTCTGGTTCCGTGTGCTTTGGTTCATTCCGTGCTGTCCCCTTTCGTGCGTGAGTAGCCAGGATGGGAAACGCAGGTAGCAATTTGCCAAGGGAGCGTCATAAATCCGGATCGAATGATCCCATCCCGGGCTCGCCGATGAAGGACGACCAGGCGTTCGTGTTTGACCGCAAGCCACACATCCACGGGTATCCGTTCGCGACGGAGGAGGAGGTGGAACCGTACGGGTACTCCAAGTCCGTGCCCGATCCAGAGTTTGCCCGTGAGCCGCGGAAGCGTTCCAGCACCATGTCCGAGGGAACGACCCCATCCGAGGCGCCTGGAGGTGGAGCGGGCGGTGGTGGCGGTGGGCCGGATGATGATGCACAGCAGGAGGAGGAGCAGTCCAGT ] [+] EMBL AGA285816 [ AAATCTTCCCCGCTGCAGCTCCC TTTTC CGTCTGGTTCCGTGTGCTTTGGTTCATTCCGTGCTGTCCCCTTTCGTGCGTGAGTAGCCATGATGGGAAACGCAGGTAGCAATTTGCCAAGGGAGCGTCATAAATCCGGATCGAATGATCCCATCCCGGGCTCGCCGATGAAGGACGACCAGGCGTTCGTGTTTGACCGCAAGCCACACATCCACGGGTATCCGTTCGCGACGGAGGAGGAGGTGGAACCGTACGGGTACTCCAAGTCCGTGCCCGATCCAGAGTTTGCCCGTGAGCCGCGGAAGCGTTCCAGCACCATGTCCGAGGGAACGACCCCATCCGACGCGCCTGTAGGTGGAGCGGGCGGTGGTGGCGGTGGGCCGGATGATGATGCACAGCAGGAGGAGGAGCAGTCCAGTAC ] [+] EMBL BX605888 [ GTAGCCAGGATGGGAAACGCAGGTAGCAATTTGCCAAGGGAGCGTCATAAATCCGGATCGAATGATCCCATCCCGGGCTCGCCGATGAAGGACGACCAGGCGTTCGTGTTTGACCGCAAGCCACACATCCACGGGTATCCGTTCGCGACGGAGGAGGAGGTGGAACCGTACGGGTACTCCAAGTCCGTGCCCGATCCAGAGTTTGCCCGTGAGCCGCGGAAGCGTTCCAGCACCATGTCCGAGGGAACGACCCCATCCGAGGCGCCTGGAGGTGGAGCGGGCGGTGGTGGCGGTGGGCCGGATGATGATGCACAGCAGGAGGAGGAGCAGTCCAGTACGCTGCCGACCGTGTTCAAGTGGGACGGCGGTGGCAAGCAGGTGTTTATTAGCGGCACGTTCTCGCAGTGGAAGGTACTGCCGATGGTGAAATCGCACGCCGACTTCGTGACCATCATTAACATCCCGGAGGGAGACCATCAGTACAAGTTTCTGGTCGATGGCGAATGGAAGCACGATCCGAAGCTGAAAAATGTAGAAAATGACGCTGGCACCACGAACAACCTCGTCACCGTGCGCCAGTCCGACTTTGAAGTA TCCAAGCGCTGGCCAAGGACAGCGAGGACACGGGCAAGGACGAGTCGAAGGAAT ] [+] EMBL CNS08M7Y [ CAGCACCATGTCCGAGGGAACGACCCCATCCGAGGCGCCTGGAGGTGGAGCGGGCGGTGGTGGCGGTGGGCCGGATGATGATGCACAGCAGGAGGAGGAGCAGTCCAGTACGCTGCCGACCGTGTTCAAGTGGGACGGCGGTGGCAAGCAGGTGTTTATTAGCGGCACGTTCTCGCAGTGGAAGGTACTGCCGATGGTGAAGTCGCACGCCGACTTCGTGACCATCATCAACATCCCGGAGGGGGACCATCAGTACAAGTTTCTGGTCGATGGCGAATGGAAGCACGATCCGAAGCTGAAAAATGTAGAAAATGACGCTGGCAC ] [+] EMBL BX604053 [ GAGGCGCCTGGAGGTGGAGCGGGCGGTGGTGGCGGTGGGCCGGATGATGATGCACAGCAGGAGGAGGAGCAGTCCAGTACGCTGCCGACCGTGTTCAAGTGGGACGGCGGTGGCAAGCAGGTGTTTATTAGCGGCACGTTCTCGCAATGGAAGGTACTGCCG ] [+] EMBL BM655111 [ ccGGCGCCTGGAGGTGGAGCGGGCGGTGGTGGCGGTGGGCCGGATGATGATGCACAGCAGGAGGAGGAGCAGTCCAGTACGCTGCCGACCGTGTTCAAGTGGGACGGCGGTGGCAAGCAGGTGTTTATTAGCGGCACATTCTCGCAGTGGAAGGTACTGCCGATGGTGAAATCGCACGCCGACTTCGTGACCATCATCAACATCCCGGAGGGGGACCATCAGTACAAGTTTCTGGTCGATGGCGAATGGAAGCACGATCCGAAGCTGAAAAATGTTGAAAATGACGCTGGCACCACGAACAACCTCGTCACCGTGCGTCAGTCCGACTTTGAAGTATTCCAAGCGCTGGCCAAGGACAGCGAGGACACGGGCAAGGACGAGTCGAAGGAATGGGGCCAGGACATACCGACGGCCAGACCGTGGGGCAAGGAATCGGGCCCGCCCGTACTGCCGCCCCATCTGCTGCAGGTCATTCTCAACAAGGACACTCCACTATCGTGCGAACCGACCCTGCTGCCCGAGCCGAACCACGTCATGCTGAATCACCTGTACGCCCTTTCGATCAAGGACGGTGTCATGGTGCTGAGCGCGACGCATCGCTACCGGAAGAAATACGTCACCACGCTGCTCTACAAACCGATCTAGATGCTTGTGGCCGCGG ] [+] EMBL CNS09C2T [ ACGATCCGAAGCTGAAAAATGTAGAAAATGACGCTGGCACCACGAACAACCTCGTCACCGTGCGTCAGTCCGACTTTGAAGTATTCCAAGCGCTGGCCAAGGACAGCGAGGACACGGGCAAGGACGAGTCGAAGGAATGGGGCCAGGACATACCGACGGCCAGACCGTGGGGCAAGGAATCGGGCCCGCCCGTACTGCCGCCCCATCTGCTGCAGGTCATTCTCAACAAGGACACTCCACTATCGTGCGAACCGACCCTGCTGCCCGAGCCGAACCACGTCATGCTGAATCACCTGTACGCCCTTTCGATCAAGGACGGTGTCATGGTGCTGAGCGCGACGCATCGCTACCGGAAGAAATACGTCACCACGCTGCTCTACAAACCGATCTAGATGCTTGT GCCGCGGGTATGTGTGCGGGAGAAGGGTGTAGCCTATTCATACCATTACGCGAGCAGCGTGCCTTGGGCGCGATAT CTTATTAGAT ] [+] EMBL BX628969 [ GACGAGTCGAAGGAATGGGGCCAGGACATACCGACGGCCAGACCGTGGGGCAAGGAATCGGGCCCGCCCGTACTGCCGCCCCATCTGCTGCAGGTCATTCTCAACAAGGACACTCCACTGTCGTGCGAACCGACCCTGCTGCCCGAGCCGAACCACGTCATGCTGAATCACCTGTACGCCCTTTCGATCAAGGACGGTGTCATGGTGCTGAGCGCGACGCATCGCTACCGGAAGAAATACGTCACCACGCTGCTCTACAAACCGATCTAGATGCTTGTGGCCGCGGGTATGTGTGCGGGAGAAGGGTGTAGCCTATTCATACCATTACGCGAGCAGCGTGCCTTGGGCGCGATAT CTTATTAGATAGGGGGGGGGGACAGGGAACTACTAATGGGGATAAACCAAAACGATTGAAAACCAAAGCTGAATAAGCTTACACACAACGACAACCCATTGTGTGGTTAATCCATCCGCTGGGGCCACAGAAAC ACACAAACGTACACAGATACATTCATCATTGGATTGGTTCCTGGTTGGTTGGTTGCTGTGCTGTGTGGAGG AAGGATAGTTTGAC ] [-] EMBL CNS08Z18 [ GGCCCGCCCGTACTGCCCCCCCATCTGCTGCAGGTCATTCTCAACAAGGACACTCCACTGTCGTGCGAACCGACCCTGCTGCCCGAGCCGAACCACGTCATGCTGAATCACCTGTACGCCCTTTCGATCAAGGACGGTGTCATGGTGCTGAGCGCGACGCATCGCTACCGGAAGAAATACGTCACCACGCTGCTCTACAAACCGATCTAGATGCTTGTGGCCGCGGGTATGTGTGCGGGAGAAGGGTGTAGCCTATTCATACCATTACGCGAGCAGCGTGCCTTGGGCGCGATAT CTTATTAGATAGGGGGGGGGGACAGGGAACTACTAATGGGGATAAACCAAAACGATTGAAAACCAAAGCTGAATAAGCTTACACACAACGACAACCCATTGTGTGGTTAATCCATCCGCTGGGGCCACAGAAAC ACACAAACGTACACAGATACATTCATCATTGGATTGGTTCCTGGTTGGTTGGTTGCTGTGCTGTGTGGAGG AAGGATAGTTTGACCGCCGCGTGGAGGTCACACAGCTAAATGTATTTTTTTTTAAATTCCTCACACACAGTTCGTTGATTATATATTGCGTAGTTTGTAGGTAAGACTAGGAAAAAAATGGCTTGGAAAAATTAACTGTAGAACAAAATAGAAGACGGGAACTGGTTTGGAGAGAATGCACGAGA AGAGAGAGAGGACGATTTACGCGACAGTCGCAGCCATGGTAGAGAGAAATATTTTAATTTGCTTTTCTGTTTTCGCCGTTTCCCAATCGATCGAAAACGACGACGACTGGCCGGTGGCGATAC AA AC ATATTTTACGAATCTTTCGTGTAAATACGCTGGATAAAG CTGGTGTTAATGAAAC GATGAATAAAGTTTTTT ] [-] EMBL CNS09C2U [ TGCTGAGCGCGACGCATCGCTACCGGAAGAAATACGTCACCACGCTGCTCTACAAACCGATCTAGATGCTTGT GCCGCGGGTATGTGTGCGGGAGAAGGGTGTAGCCTATTCATACCATTACGCGAGCAGCGTGCCTTGGGCGCGATAT CTTATTAGATA GGGGGGGACAGGGAACTACTAATGGGGATAAACCAAAAAGATTGAAAACCAAAGCTGAATAAGCTTACACACAACGACAACCCATTGTGTGGTTAATCCATCCGCTGGGGCCACAGAAAC ACACAAACGTACACAGATACATTCATCATTGGATTGGTTCCTGGTTGGTTGGTTGCTGTGCTGTGTGGCGGAAAGGATAATTTGACCGCCGCGTGGAGGTCACACAGCTAAATGTA TTTTTTTTAAATTCCTCACACACAGTTCGTTGATTATATATTGCGTAGTTTGTAGGTAAGACTAGGAAAAGAATGGCTTGGAAAAATTAACTGTAGAACAAAAAAGAAGACGGGAACTAGTTTGGAGAGAATGCAGAAGAG AGAGAAAGAGGACGATTTACGCGACAGTCGCAGCCATGGTAGAGAGAAATATTTTAA TTGCTTTTCTGTTTTCGCCGTTTCCCAATCGATCGAAAACGACGACGACTGGCCGGTGGCGATAC AAATACAATATTTTACGAATCTTTCGTGTAAATACGCTGGATAAAG CTGGTGTTAATGAAAC GATGAAT AAGTATTT ] [-] EMBL CNS08M7Z [ TGCTGAGCGCGACGCATCGCTACCGGAAGAAATACGTCACCACGCTGCTCTACAAACCGATCTAGATGCTTGT GCCGCGGGTATGTGTGCGGGAGAAGGGTGTAGCCTATTCATACCATTACGCGAGCAGCGTGCCTTGGGCGCGATATGCTTATTAGATA GGGGGGGACAGGGAACTACTAATGGGGATAAACCAAAAAGATTGAAAACCAAAGCTGAATAAGCTTACACACAACGACAACCCATTGTGTGGTTAATCCATCCGCTGGGGCCACAGAAAC ACACAAACGTACACAGATACATTCATCATTGGATTGGTTCCTGGTTGGTTGGTTGCTGTGCTGTGTGGCGGAAAGGATAATTTGACCGCCGCGTGGAGGTCACACAGCTAAATGTA TTTTTTTTAAATTCCTCACACACAGTTCGTTGATTATATATTGCGTAGTTTGTAGGTAAGACTAGGAAAAGAATGGCTTGGAAAAATTAACTGTAGAACAAAAAAGAAGACGGGAACTAGTTTGGAGAGAATGCAGAAGAG AGAGAAAGAGGACGATTTACGCGACAGTCGCAGCCATGGTAGAGAGAAATATTTTAA TTGCTTTCCTGTTTTCGCCGTTTCCCAATCGATCGAAAACGACGACGACTGGCCGGTGGCGATAC AAATACAATATTTTACGAATCTTTCGTGTAAATACGCTGGATAAAG CT GT TTAATAAA ] [+] EMBL BM632859 [ ccgCCAAAGCTGAATAAGCTTACACACAACGACAACCCATTGTGTGGTTAATCCATCCGCTGGGGCCACAGAAACACACAAACACAAACGTACACAGATACATTCATCATTGGATTGGTTCCTGGTTGGTTGGTTGCTGTGCTGTGTGGCGGAAAGGATAATTTGACCGCCGCGTGGAGGTCACACAGCTAAATGTA TTTTTTTTAAATTCCTCACACACAGTTCGTTGATTATATATTGCGTAGTTTGTAGGTAAGACTAGGAAAAGAATGGCTTGGAAAAATTAACTGTAGAAC AAAAAGAAAACGGGAACTGGTTTGGAGAGAATGTACGAGAAGAGAGAGAGAGGACGATTTACGCGACAGTCGCAGCCATGGTAGAGAGAAATATTTTAA TTGCTTTTCTGTTTTCGCCGTTTCCCAATCGATCGAAAACGACGACGACTGGCCGGTGGCGATACAAAA AC ATATTTTACGAATCTTTCGTGTAAATACGCTGGATAAAG CTGGTG ] [-] EMBL AGA283720 [ TGCTGTGCTGTGTGGAGG AAGGATAGTTTGACCGCCGCGTGGAGGTCACACAGCTAAATGTA TTTTTTTTAAATTCCTCACACACAGTTCGTTGATTATATATTGCGTAGTTTGTAGGTAAGACTAGGAAAAAAATGGCTTGGAAAAATTAACTGTAGAACAAAATAGAAGACGGGAACTGGTTTGGAGAGAATGCACGAGA AGAGAGAGAGGACGATTTACGCGACAGTCGCAGCCATGGTAGAGAGAAATATTTTAATTTGCTTTTCTGTTTTCGCCGTTTCCCAATCGATCGAAAACGACGACGACTGGCCGGTGGCGATAC AA AC ATATTTTACGAATCTTTCGTGTAAATACGCTGGATAAAG CTGGTGTTAATGAAAC GATGAATAAAGTTTTTTCGAACCCTCAAAAAAAA ] [-] EMBL AGA284511 [ CACAGCTAAATGTA TTTTTTTTAAATTCCTCACACACAGATCGTTGATTATATATTGCGTAGTTTCTAGGTACGAGTAGGAAAAAAATGGTGTGGAAAAATTAACTGTCGAACAAAATAGAAGACGGGAACTGCTTTGGAGAGAATGCACGCGA AGAGGGAGAGGACGATTTACGCGACAGTCGCATCCATGGTAGAGAGAAATATTTTAATTTGCTTTTCTGTCTTCCCCGTTTCCCAATCGATCGAAAACGACGACGACTGGCCGGTGGCGATAC AA AC ATATTTTACGAATCTTTCGTGTAAATACGCTGGATAAAG CTGGTGTTAATGAAAC GATGATTAAAGTTTTTTCGAACACTCTAAACAGAAAAAAATAGAAAAA] [-] EMBL CNS08QMB [ tTGG TTGGAAAAATTAACTGTAGAAC AAAAAGAAGACGGGAACTAGTTTGGAGAGAATGCAGAAGAG AGAGAAAGAGGACGATTTACGCGACAGTCGCAGCCATGGTAGAGAGAAATATTTTAA TTGCTTTTCTGTTTTCGCCGTTTCCCAATCGATCGAAAACGACGACGACTGGCCGGTGGCGATAC AAATACAATATTTTACGAATCTTTCGTGTAAATACGCTGGATAAAGCCTGGTGTTAATGAAACAGATGAATAAAGTTTTT ] consensusID : consensus_9841#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 614 fasta sequence [CCGCGGACGCGTGGGCGAGCCCAAATCCAAAATCTTCCCCGCTGTAGCTCCCTTTTCCGTCTGGTTCCGTGTGCTTTGATTCATTCCGTGCTGTCCCCTTTCGTGCGTGAGTAGCCAGGATGGGAAATGCAGGTAGTAATTTGCCAAGGGAGCGTCATAAATCCGGATCGAATGATCCCATCCCGGGCTCGCCGATGAAGGACGACCAGGCATTCGTGTTTGACCGCAAGCCACACATCCACGGGTATCCGTTCGCGACGGAGGAGGAGGTGGAACCGTACGGGTACTCCAAGTCCGTGCCCGATCCAGAGTTTGCCCGCGAGCCGCGGAAGCGTTCCAGCACCATGTCCGAGGGAACGACCCCATCCGAGGCGCCTGGAGGTGGAGCGGGTGGTGGTGGCGGTGGGCCGGATGATGATGCACAGCAGGAGGAGGAGCAGTCCAGTACGCTGCCGACCGTGTTCAAGTGGGACGGCGGTGGCAAGCAGGTGTTTATTAGCGGCACGTTCTCGCAGTGGAAGGTACTGCCGATGGTGAAATCGCACGCCGACTTCGTGACCATCATCAACATCCCGGAGGGAGACCATCAGTACAAGTTTCTGGTCGATGGCGAA] [+] EMBL BM578888 [CCGCGGACGCGTGGGCGAGCCCAAATCCAAAATCTTCCCCGCTGTAGCTCCCTTTTCCGTCTGGTTCCGTGTGCTTTGATTCATTCCGTGCTGTCCCCTTTCGTGCGTGAGTAGCCAGGATGGGAAATGCAGGTAGTAATTTGCCAAGGGAGCGTCATAAATCCGGATCGAATGATCCCATCCCGGGCTCGCCGATGAAGGACGACCAGGCATTCGTGTTTGACCGCAAGCCACACATCCACGGGTATCCGTTCGCGACGGAGGAGGAGGTGGAACCGTACGGGTACTCCAAGTCCGTGCCCGATCCAGAGTTTGCCCGCGAGCCGCGGAAGCGTTCCAGCACCATGTCCGAGGGAACGACCCCATCCGAGGCGCCTGGAGGTGGAGCGGGTGGTGGTGGCGGTGGGCCGGATGATGATGCACAGCAGGAGGAGGAGCAGTCCAGTACGCTGCCGACCGTGTTCAAGTGGGACGGCGGTGGCAAGCAGGTGTTTATTAGCGGCACGTTCTCGCAGTGGAAGGTACTGCCGATGGTGAAATCGCACGCCGACTTCGTGACCATCATCAACATCCCGGAGGGAGACCATCAGTACAAGTTTCTGGTCGATGGCGAA] consensusID : consensus_9841#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 566 fasta sequence [GCAGAATCCCCGAGGATTTGACAAAACACGTCAAAAAGGGGAAAAATTTTGCTCACAGAACAAGGCGAGCCCAAATCCAAAATCTTCCCCGCTGCAGCTCCCTTTTCCGTCTGGTTCCTGTGTGCTTTGGTTCATTCCGTGCTGTCCCCTTTCGTGCGTGAGCTAGCCAGCGATGGGAAACGCAGGTAGCAATTTGCCAAGGGCAGCGTCATTAAATCCGGATCGAATTGATCCCATCCCGGGCTTCGCCGATGAAGGGACGACCAGCGCGTTCGTGTTTGGACCTGCAAGCCACACATCCACGGGTATCCTGTTCGCGACGGAGCTGAGTGAGGTGGAACCGTACTGGGTACTCCAAAGTTCCGTGCCCCAGATCCAGAGTTTTGCCCGTGAGCCGCGGCAAGGCGTTCCAGCACCACTGTCCGAGGGAACGACCCCATTCCGAGGGCNGCCTGGAGGTGGAGCGGGCGGTGGTGGCGGTGGGCCGGATGATGATGCACAGCAGGAGGAGGAGCAGTCCAGTACGCTGCNGACCGTGTTCAAGTGGGACGGCGGTGGCAAGCAGG] [+] EMBL AL694918 [GCAGAATCCCCGAGGATTTGACAAAACACGTCAAAAAGGGGAAAAATTTTGCTCACAGAACAAGGCGAGCCCAAATCCAAAATCTTCCCCGCTGCAGCTCCCTTTTCCGTCTGGTTCCTGTGTGCTTTGGTTCATTCCGTGCTGTCCCCTTTCGTGCGTGAGCTAGCCAGCGATGGGAAACGCAGGTAGCAATTTGCCAAGGGCAGCGTCATTAAATCCGGATCGAATTGATCCCATCCCGGGCTTCGCCGATGAAGGGACGACCAGCGCGTTCGTGTTTGGACCTGCAAGCCACACATCCACGGGTATCCTGTTCGCGACGGAGCTGAGTGAGGTGGAACCGTACTGGGTACTCCAAAGTTCCGTGCCCCAGATCCAGAGTTTTGCCCGTGAGCCGCGGCAAGGCGTTCCAGCACCACTGTCCGAGGGAACGACCCCATTCCGAGGGCNGCCTGGAGGTGGAGCGGGCGGTGGTGGCGGTGGGCCGGATGATGATGCACAGCAGGAGGAGGAGCAGTCCAGTACGCTGCNGACCGTGTTCAAGTGGGACGGCGGTGGCAAGCAGG] consensusID : consensus_9841#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 522 fasta sequence [CGAGAATCGGCACGAGGGGCGATTGGAAGCACGATCCGAAGCTGAAAAATGTAGAAAATGACGCTGGCACCACGAACAACCTCGTCACCGTGCGCCAGTCCGACTTTGAAGTATTCCAAGCGCTGGCCAAGGACAGCGAGGACACGGGCAAGGACGAGTCGAAGGAATGGGGCCAGGACATACCGACGGCCAGACCGTGGGGCAAGGAATCGGGCCCGCCCGTACTGCCGCCCCATCTGCTGCAGGTCATTCTCAACAAGGACACTCCACTGTCGTGCGAACCGACCCTGCTGCCCGAGCCGAACCACGTCATGCTGAATCACCTGTACGCCCTTTCGATCAAGGACGGTGTCATGGTGCTGAGCGCGACGCATCGCTACCGGAAGAAATACGTCACCACGCTGCTCTACAAACCGATCTAGATGCTTGTGGCCGCGGGTATGTGTGCGGGAGAAGGGTGTAGCCTATTCATACCATTACGCGAGCAGCGTGCCTNGGGCGCGATATCTCATCAGATAGGGG] [+] EMBL BX619730 [CGAGAATCGGCACGAGGGGCGATTGGAAGCACGATCCGAAGCTGAAAAATGTAGAAAATGACGCTGGCACCACGAACAACCTCGTCACCGTGCGCCAGTCCGACTTTGAAGTATTCCAAGCGCTGGCCAAGGACAGCGAGGACACGGGCAAGGACGAGTCGAAGGAATGGGGCCAGGACATACCGACGGCCAGACCGTGGGGCAAGGAATCGGGCCCGCCCGTACTGCCGCCCCATCTGCTGCAGGTCATTCTCAACAAGGACACTCCACTGTCGTGCGAACCGACCCTGCTGCCCGAGCCGAACCACGTCATGCTGAATCACCTGTACGCCCTTTCGATCAAGGACGGTGTCATGGTGCTGAGCGCGACGCATCGCTACCGGAAGAAATACGTCACCACGCTGCTCTACAAACCGATCTAGATGCTTGTGGCCGCGGGTATGTGTGCGGGAGAAGGGTGTAGCCTATTCATACCATTACGCGAGCAGCGTGCCTNGGGCGCGATATCTCATCAGATAGGGG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9841#0 CCGAAATACGCAAAACACGCAAAAAGGGGAAAAATTTTGCTCACAGAACAAGGCGAGCCC 60 consensus_9841#3 ------------------------------------------------------------ consensus_9841#1 ------------------------------------------------------------ consensus_9841#2 ------------------------------------------------------------ consensus_9841#0 AAATCCAAAATCTTCCCCGCTGCAGCTCCCTTTTCCGTCTGGTTCCGTGTGCTTTGGTTC 120 consensus_9841#3 ------------------------------------------------------------ consensus_9841#1 ------------------------------------------------------------ consensus_9841#2 ------------------------------------------------------------ consensus_9841#0 ATTCCGTGCTGTCCCCTTTCGTGCGTGAGTAGCCAGGATGGGAAACGCAGGTAGCAATTT 180 consensus_9841#3 ------------------------------------------------------------ consensus_9841#1 ------------------------------------------------------------ consensus_9841#2 ------------------------------------------------------------ consensus_9841#0 GCCAAGGGAGCGTCATAAATCCGGATCGAATGATCCCATCCCGGGCTCGCCGATGAAGGA 240 consensus_9841#3 ------------------------------------------------------------ consensus_9841#1 ------------------------------------------------------------ consensus_9841#2 ------------------------------------------------------------ consensus_9841#0 CGACCAGGCGTTCGTGTTTGACCGCAAGCCACACATCCACGGGTATCCGTTCGCGACGGA 300 consensus_9841#3 ------------------------------------------------------------ consensus_9841#1 ------------------------------------------------------------ consensus_9841#2 ------------------------------------------------------------ consensus_9841#0 GGAGGAGGTGGAACCGTACGGGTACTCCAAGTCCGTGCCCGATCCAGAGTTTGCCCGTGA 360 consensus_9841#3 ------------------------------------------------------------ consensus_9841#1 ------------------------------------------------------------ consensus_9841#2 ------------------------------------------------------------ consensus_9841#0 GCCGCGGAAGCGTTCCAGCACCATGTCCGAGGGAACGACCCCATCCGAGGCGCCTGGAGG 420 consensus_9841#3 ------------------------------------------------------------ consensus_9841#1 ------------------------------------------------------------ consensus_9841#2 ------------------------------------------------------------ consensus_9841#0 TGGAGCGGGCGGTGGTGGCGGTGGGCCGGATGATGATGCACAGCAGGAGGAGGAGCAGTC 480 consensus_9841#3 ------------------------------------------------------------ consensus_9841#1 ------------------------------------------------------------ consensus_9841#2 ------------------------------------------------------------ consensus_9841#0 CAGTACGCTGCCGACCGTGTTCAAGTGGGACGGCGGTGGCAAGCAGGTGTTTATTAGCGG 540 consensus_9841#3 ------------------------------------------------------------ consensus_9841#1 ------------------------------------------------------------ consensus_9841#2 ------------------------------------------------------------ consensus_9841#0 CACGTTCTCGCAGTGGAAGGTACTGCCGATGGTGAAATCGCACGCCGACTTCGTGACCAT 600 consensus_9841#3 ------------------------------------------------------------ consensus_9841#1 ------------------------------------------------------------ consensus_9841#2 -------------------------------------GCAGAATCCCCGAGGATTTGACA 23 consensus_9841#0 CATCAACATCCCGGAGGGGGACCATCAGTACAAGTTTCTGGTCGATGG-CGAATGGAAGC 659 consensus_9841#3 ------------------------------CGAGAATCGGCACGAGGGGCGATTGGAAGC 30 consensus_9841#1 ---------------------------CCGCGGACGCGTGGGCGAGCCCAAATCCAAAAT 33 consensus_9841#2 AAACACGTCAAAAAGGGGAAAAATTTTGCTCACAGAACAAGGCGAGCCCAAATCCAAAAT 83 * *** * ** consensus_9841#0 ACGATCCGAAGCTGAAAAATGTAGAAAATGACGCT--GGCACCACGAACAACCTCGTCAC 717 consensus_9841#3 ACGATCCGAAGCTGAAAAATGTAGAAAATGACGCT--GGCACCACGAACAACCTCGTCAC 88 consensus_9841#1 CTTCCCCGCTGTAGCTCCCTTTTCCGTCTGGTTCC-GTGTGCTTTGATTCATTCCGT-GC 91 consensus_9841#2 CTTCCCCGCTGCAGCTCCCTTTTCCGTCTGGTTCCTGTGTGCTTTGGTTCATTCCGT-GC 142 *** * * * * ** * * * * * *** * consensus_9841#0 CGTGCGCCAGTCCGACTTTGAAGTATTCCAAGCGCTGGCCAAGGACAGCGAGGACACGGG 777 consensus_9841#3 CGTGCGCCAGTCCGACTTTGAAGTATTCCAAGCGCTGGCCAAGGACAGCGAGGACACGGG 148 consensus_9841#1 TGTCCCCT--TTCGTGCGTGAG-TAGCC--AG-GATGGG-AAATGCAGGTAGTAATTTGC 144 consensus_9841#2 TGTCCCCT--TTCGTGCGTGAGCTAGCC--AGCGATGGG-AAACGCAGGTAGCAATTTGC 197 ** * * * ** *** ** * ** * *** ** *** ** * * consensus_9841#0 CAAGGACGAGTCGAAGGAATGGGGCCAGGACATACCGACGGCCAGACCGTGGGGCAAGGA 837 consensus_9841#3 CAAGGACGAGTCGAAGGAATGGGGCCAGGACATACCGACGGCCAGACCGTGGGGCAAGGA 208 consensus_9841#1 CAAGGG-AGCGTCAT-AAATCCGGATCGAAT-GATCCCATCCCGGGCT-CG--CCGATGA 198 consensus_9841#2 CAAGGGCAGCGTCATTAAATCCGGATCGAATTGATCCCATCCCGGGCTTCG--CCGATGA 255 ***** * *** ** * * * * ** * * * * * ** consensus_9841#0 ATCGGGCCCGCCCGTACTGCCGCCCCATCTGCTGCAGGTCATTCTCAACAAGGACACTCC 897 consensus_9841#3 ATCGGGCCCGCCCGTACTGCCGCCCCATCTGCTGCAGGTCATTCTCAACAAGGACACTCC 268 consensus_9841#1 A--GG-ACGACCAG-GCATTCGTGTTTGA--CCGCAAGCCACACATC-CACGGGTATCC- 250 consensus_9841#2 A--GGGACGACCAGCGCGTTCGTGTTTGGACCTGCAAGCCACACATC-CACGGGTATCCT 312 * ** * ** * * ** * *** * ** * ** ** * * consensus_9841#0 ACTGTCGTGCGAACCGACCCTGCTGCCCGAGCCGAACCACGTCATGCTGAATCACCTGTA 957 consensus_9841#3 ACTGTCGTGCGAACCGACCCTGCTGCCCGAGCCGAACCACGTCATGCTGAATCACCTGTA 328 consensus_9841#1 GTTCGCGACGGAG--GAG-GAGGTG---GAACCGTAC-GGGTACTCCAAG--TCCGTGCC 301 consensus_9841#2 GTTCGCGACGGAGCTGAGTGAGGTG---GAACCGTACTGGGTACTCCAAAGTTCCGTGCC 369 * ** ** ** * ** ** *** ** ** * * * ** consensus_9841#0 CGCCCTTTCGATCAAGGACGGTGTCATGGTGCTGAGCGCGAC-GCATCGCTACCGGAAGA 1016 consensus_9841#3 CGCCCTTTCGATCAAGGACGGTGTCATGGTGCTGAGCGCGAC-GCATCGCTACCGGAAGA 387 consensus_9841#1 C--GATCCAGAGTTT-GCCCGCGAGCCGCGG--AAGCGTTCCAGCACCA-TGTCCGAGGG 355 consensus_9841#2 CCAGATCCAGAGTTTTGCCCGTGAGCCGCGGCAAGGCGTTCCAGCACCACTGTCCGAGGG 429 * * ** * * * * * * *** * *** * * * ** * consensus_9841#0 AAT-ACGTCACCACGCTG--CTCTACAAACCGATCTAGATGCTTGTGGCCGCGGGTATGT 1073 consensus_9841#3 AAT-ACGTCACCACGCTG--CTCTACAAACCGATCTAGATGCTTGTGGCCGCGGGTATGT 444 consensus_9841#1 AACGACCCCAT-CCGAGG--CGCCTGGAGGTGGAGCGGGTGGTGGTGGCGGTGGGCCGGA 412 consensus_9841#2 AACGACCCCATTCCGAGGGCNGCCTGGAGGTGGAGCGGGCGGTGGTGGCGGTGGGCCGGA 489 ** ** ** ** * * * * * * * ***** * *** * consensus_9841#0 GTGCGGGAGAAGGGTGTAGCCTATTCATACCATTACGCGAGCAGCGTGCCTTGGGCGCGA 1133 consensus_9841#3 GTGCGGGAGAAGGGTGTAGCCTATTCATACCATTACGCGAGCAGCGTGCCTNGGGCGCGA 504 consensus_9841#1 TGATGATGCACAGCAGGAGGAGGAGCAGTCCAGTACGCTGCCGACCGTGTTCAAGTGGGA 472 consensus_9841#2 TGATGATGCACAGCAGGAGGAGGAGCAGTCCAGTACGCTGCNGACCGTGTTCAAGTGGGA 549 * * * * ** ** *** ***** * * * * ** consensus_9841#0 TATCT-TATTAGATAGGGGGGGGGGACAGGGAACTACTAATGGGGATAAACCAAAACGAT 1192 consensus_9841#3 TATCT-CATCAGATAGGGG----------------------------------------- 522 consensus_9841#1 CGGCGGTGGCAAGCAGGTGTTTATTAGCGGCACGTTCTCGCAGTGGAAGGTACTGCCGAT 532 consensus_9841#2 CGGCGGTGGCAAGCAGG------------------------------------------- 566 * * *** consensus_9841#0 TGAAAACCAAAGCTGAATAAGCTTACACACAACGACAACCCATTGTGTGGTTAATCCATC 1252 consensus_9841#3 ------------------------------------------------------------ consensus_9841#1 GGTGAAATCGCACGCCGACTTCGTGACCATCATCAACATCCCGGAGGGAGACCATCAGTA 592 consensus_9841#2 ------------------------------------------------------------ consensus_9841#0 CGCTGGGGCCACAGAAACACACAAACGTACACAGATACATTCATCATTGGATTGGTTCCT 1312 consensus_9841#3 ------------------------------------------------------------ consensus_9841#1 CAAGTTTCTGGTCGATGGCGAA-------------------------------------- 614 consensus_9841#2 ------------------------------------------------------------ consensus_9841#0 GGTTGGTTGGTTGCTGTGCTGTGTGGAGGAAGGATAGTTTGACCGCCGCGTGGAGGTCAC 1372 consensus_9841#3 ------------------------------------------------------------ consensus_9841#1 ------------------------------------------------------------ consensus_9841#2 ------------------------------------------------------------ consensus_9841#0 ACAGCTAAATGTATTTTTTTTAAATTCCTCACACACAGTTCGTTGATTATATATTGCGTA 1432 consensus_9841#3 ------------------------------------------------------------ consensus_9841#1 ------------------------------------------------------------ consensus_9841#2 ------------------------------------------------------------ consensus_9841#0 GTTTGTAGGTAAGACTAGGAAAAAAATGGCTTGGAAAAATTAACTGTAGAACAAAAAAGA 1492 consensus_9841#3 ------------------------------------------------------------ consensus_9841#1 ------------------------------------------------------------ consensus_9841#2 ------------------------------------------------------------ consensus_9841#0 AGACGGGAACTGGTTTGGAGAGAATGCACGAGAAGAGAGAGAGGACGATTTACGCGACAG 1552 consensus_9841#3 ------------------------------------------------------------ consensus_9841#1 ------------------------------------------------------------ consensus_9841#2 ------------------------------------------------------------ consensus_9841#0 TCGCAGCCATGGTAGAGAGAAATATTTTAATTGCTTTTCTGTTTTCGCCGTTTCCCAATC 1612 consensus_9841#3 ------------------------------------------------------------ consensus_9841#1 ------------------------------------------------------------ consensus_9841#2 ------------------------------------------------------------ consensus_9841#0 GATCGAAAACGACGACGACTGGCCGGTGGCGATACAAACATATTTTACGAATCTTTCGTG 1672 consensus_9841#3 ------------------------------------------------------------ consensus_9841#1 ------------------------------------------------------------ consensus_9841#2 ------------------------------------------------------------ consensus_9841#0 TAAATACGCTGGATAAAGCTGGTGTTAATGAAACGATGAATAAAGTTTTTTCGAACCCTC 1732 consensus_9841#3 ------------------------------------------------------------ consensus_9841#1 ------------------------------------------------------------ consensus_9841#2 ------------------------------------------------------------ consensus_9841#0 AAAAAAAAAAAAAATAGAAAAA 1754 consensus_9841#3 ---------------------- consensus_9841#1 ---------------------- consensus_9841#2 ---------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||