These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9852#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 20 consensus length = 1154 fasta sequence [CCGCGGAGGCGTGAACTCCGCCCGGTGGAAAGTGGTACTGCCTTTTGCGCAAAGAATGTGGCTTCTTCATGGATTTCTGGTCATTAGTTGGGGTTTGCTCGCTTCTTCAAACGAAATAGAGCTACCCGCCAAGTTTGTTACCAGCAGTTCGCACACAAACAACTGGGCAGTGCTGGTTGATACGTCCCGC-TTT-TGGTTCAACTATCGACATATTGCAAATGTTCTCTCCGTATACCGTTCCGTGAAGC-GGCTGGGCATCCC-GGACAGTCAGATACTGC-TCATGGTGGCGGACGATATGGCGTGCAATGCGCGCAATCCACGGCCAGCCACAGTTTTCAACAATGCAAAACAACACATCAACGTGTACGGGTC-GGATGTCGAGGTGGACTACCGGGGCTACGAGGTGACGGTGGAAAATT-TCGTACGACTACTGAC-GGGCCGAAACGAAAACGGCACTGCCCGTTCGAAGCGAT-TGCTTTCCGACTCGGGAAGTAACGTG-CTGATATACCTGACCGGTCACGGAGGGGATGGA-TTTCTTAAGTT-TCA-AGACTCGGAGGAAATTACAA-ATC-AGGAGTTGGCTGATGCGATCGAGCAGATGTGGCAGAAGCAACGGTACAACGAGCTGTTCTTCATGATCGACACTTGCCAAGCCGCCTCAATGTATGAAAAGTTCTACTCT-CCGAACATACTTG-CCGTGG--CCAGCAGTTTGGTGGGAGAGGATTCATTGTCGCATCACATCGATCCGGCCATCGGTGTGTACATTATCGACCGCTACACGTACAATGCACTCGAG-TTTTTGGAGCGCGTGGAGTGGAACAGCAAGAAGACAATGGGCGATTTTCTTTCCGTTTGTCCTAAGCGAGCGTGCATCTCGACGGTGGGTGTAAGGAAGGATCTTTACCCGAAGGATCCCTACAAAGTTCCTATAACGGATTTCTTCGGTTCCATTCGTCCGACAGAGATTTCATCCGACGTAGTCAACGTGACACTGTCAACCATTCCAGAAGTATTGTCATCGCCAAAGCCAATCAGCAAACCAAATGCTCAACTGTTTTACGAACAGTTTCCAACCAAACTGTTTCAGCGATCCTAGTTTGGGCCAGTAGCAAATAAAATCTGAACAAAACAAACGACAAGAAAATCAATAAAAAAAA] [+] EMBL BM584590 [CCGCGGACGCGTGGGCT CGTGCGGTGGAAAGTGGTACCGCCGTTTGCGCAAAGAATGTGGCTTCTTCATGGATTTCTGGTCATTAGTTGGGGTTTGCTCGCTTCTTCAAACGAAATAGAGCTACCCGCCAAGTTTGTTACCAGCAGTTCGCACACAAACAACTGGGCAGTGCTGGTTGATACGTCCCGC TTT TGGTTCAACTATCGACATATTGCAAATGTTCTCTCCGTGTACCGTTCCGTGAAGC GGCTGGGCATCCC GGACAGTCAGATACTGC TCATGGTGGCGGACGATATGGCGTGCAATGCGCGCAATCCACGGCCAGCCACAGTTTTCAACAATGCAAAACAACACATCAACGTGTACGGGTC GGATGTCGAGGTAGACTACCGGGGCTACGAGGTGACGGTGGAAAATT TCGTACGACTACTGAC GGGCCGAAATGAAAACGGCACTGCCCGTTCGAAGCGAT TGCTCTCCGACTCAGGAAGTAACGTG CTGATATACCTGACCGGTCATGGAGGGGATGGA TTTCTTAAGTT TCA AGACTCGGAGGAAATTACCA ATC AGGAGTTGGCTGATGCGATCGAGCAGATGTGGCAGAAGCAACGGTATAACGAGCTGTTCTTCATGATCGACACTTGCCAAGC ] [+] EMBL CNS09KHM [ aggtttgttGTGAACTCCGCCCGGTGGAAAGTGGTACTGCCTTTTGCGCAAAGAATGTGGCTTCTTCATGGATTTCTGGTCATTAGTTGGGGTTTGCTCGCTTCTTCAAACGAAATAGAGCTACCCGCCAAGTTTGTTACCAGCAGTTCGCACACAAACAACTGGGCAGTGCTGGTTGATACGTCCCGC TTT TGGTTCAACTATCGACATATTGCAAATGTTCTCTCCGTATACCGTTCCGTGAAGC GCTGGGCATCCC GGACAGTCAGATACTGC TCATGGTGGCGGACGATATGGCGTGCAATGCGCGCAATCCACGGCCAGCCACAGTTTTCAACAATGCAAAACAACACATCAACGTGTACGGGTC GGATGTCGAGGTGGACTACCGGGGCTACGAGGTGACGGTGGAAAATT TCGTACGACTACTGAC GGGCCGAAACGAAAACGGCACTGCCCGTTCGAAGCGAT TGCTTTCCGACTCGGGAAGTAACGTG CTGATATACCTGACCGGTCAC GAGGGGATGGA TTTCTTAAGTT TCA AGACTCGGAGGAAATTACAA ATC AGGAGTTGGCTGATGCGATCGAGCAGATGTGGCAGAAGCAACGGTACAACGAGCTGTTCTTCATGATCGACACTTGCCAAGCCGCCTCAATGTATGAAAAGTTCTACTCT CCGAACATACTTG CCGTGG CCAGCAGTTTGGTGGGAGAGGATTCATTGTCGCATCACATCGATCCGGCCATCGGTGTGTACATTATCGACCGCTACACGTACAATGCACTCGAG TTTTTGGAGCGCGTGGAGTGGAACAGCAAGAAGACAATGGGCGATTTTCTTTCCGTTTGTCCTAAGCGAGCGTGCATCTCGACGGTGGGTGTAAGGAAGGATCTTTACCCGAA GATCCCTACAAAGTTCCTATAACGGATTTCTTCGGTTCCATTCGTCCGACAGAGATTTCATCCGACGTAGT AACGTGA ] [+] EMBL AL931061 [ gccccgagGTTAACTCCGCCCGGTGGAAAGTGGTACTG CGTTTGCGCAAAGAATGTGGCTTCTTCATGGATTTCTGGTCATTAGTNGGGGTTTGCTCGCTTCTTCAAACGAAATAGAGCTACCCGCCAAGTTTGTTACCAGCAGTTCGCACACAAACAACTGGGCAGTGCTGGTTGATACGTCCCGCATTTATGGTTCAACTATCGACATATTGCAAATGTTCTCTCCGTGTACCGTTCCGTGAAGCTGGCTGGGCATCCCTGGACAGTCAGATACTGCGTCATGGTGGCGGACGATATGGCGTGCAATGCGCGCAATCCACGGCCAGCCACAGTTTTCAACAATGCAAAACAACACATCAACGTGTACGGGTCTGGATGTCGAGGTAGACTACCGGGGCTACGAGGTGACGGTGGACAATTATCGTACGACTACTGAC GGGCCGAAACGAAAACGGCACTGCCCGTTCGAAGCGATATGCTCTCCGACTCGGGAAGTAACGTGTTTGATATACCTGACCGGTCACGGAGGGGATGGA TAACTTAAGTTATCACAGACTCGGAGGAAATTACAACATCNCGGANTTGGCTGAT ] [+] EMBL CNS090B1 [ CGCCCGGTGGAAAGTGGTACTGCCTTTTGCGCAAAGAATGTGGCTTCTTCATGGATTTCTGGTCATTAGTTGGGGTTTGCTCGCTTCTTCAAACGAAATAGAGCTACCCGCCAAGTTTGTTACCAGCAGTTCGCACATAAACAACTGGGCAGTGCTGGTTGATACGTCCCGC TTT TGGTTCAACTATCGACATATTGCAAATGTTCTCTCCGTATACCGTTCCGTGAAGC GGCTGGGCATCCC GGACAGTCAGATACTGC TCATGGTGGCGGACGATATGGCGTGCAATGCGCGCAATCCACGGCCAGCCACAGTTTTCAACAATGCAAAACAACACATCAACGTGTACGGGTC GGATGTCGAGGTGGACTACCGGGGCTACGAGGTGACGGTGGAAAATT TCGTACGACTACTGAC GGGCCGAAACGAAAACGGCACTGCCCGTTCGAAGCGAT TGCTTTCCGACTCGGGAAGTAACGTG CTGATATACCTGACCGGTCACGGAGGGGATGGA TTTCTTAAGTT TCA AGACTCGGAGGAAATTACAA ATC AGGAGTTGGCTGATGCGATCGAGCAGATGTGGCAGAAGCAACGGTACAACGAGCTGTTCTTCATGATCGACACTTGCCAAGCCGCCTCAATGTA ] [+] EMBL CNS08SDP [ GCCCGGTGGAAAGTGGTACTGCCTTTTGCGCAAAGAATGTGGCTTCTTCATGGATTTCTGGTCATTAGTTGGGGTTTGCTCGCTTCTTCAAACGAAATAGAGCTACCCGCCAAGTTTGTTACCAGCAGTTCGCACACAAACAACTGGGCAGTGCTGGTTGATACGTCCCGC TTT TGGTTCAACTATCGACATATTGCAAATGTTCTCTCCGTATACCGTTCCGTGAAGC GGCTGGGCATCCC GGACAGTCAGATACTGC TCATGGTGGCGGACGATATGGCGTGCAATGCGCGCAATCCACGGCCAGCCACAGTTTTCAACAATGCAAAACAACACATCAACGTGTACGGGTC GGATGTCGAGGTGGACTACCGGGGCTACGAGGTGACGGTGGAAAATT TCGTACGACTACTGAC GGGCCGAAACGAAAACGGCACTGCCCGTCCGAAGCGAT TGCTTTCCGACTCGGGAAGTAACGTG CTGATATACCTGACCGGTCAC GAGGGGATGGA TTTCTTAAGTT TCA AGACTCGGAGGAAATTACAA ATC AGGAGTTGGCTGATGCGATCGAGCAGATGTGGCAGAAGCAACGGTACAACGAGCTGTTCTTCATGATCGACACTTGCCAAGCCGCCTCAATGTATGAAAAGTTCTACTCT CCGAACATACTTG CCGTGG CCAGCAGTTTGGTGGGAGAGGATTCATTGTCGCATCACATCGATCCGGCCATCGGTGTGTACATTATCGACCGCTACACGTACAATGCACTCGAG TTTTTGGAGCGCGTGGAGTGGAACAGCAAGAAGACAATGGGCGATTTTCTTTCCGTTTGTCCTAAGCGAGCGTGCATCTCGACGGTGGGTGTAAGGAAGGATCTTTACCCGAA GATCCCTACAAAGTTCCTA ] [+] EMBL BM637075 [ CCGGGTTTAAAGTGGTACCGCCGTTTGCGCAAAGAATGTGGCTTCTTCATGGATTTCTGGTCATTAGTTGGGTTTTGCTCGCTTCTTCAAACGAAATAGAGC ] [+] EMBL CNS09R44 [ CTGCCTATTGCGCAAAGAATGTGGCTTCTTCATGGATTTCTGGTCATTAGTTGGGGTTTGCTCGCTTCTTCAAACGAAATAGAGCTACCCGCCAAGTTTGTTACCAGCAGTTCGCACACAAACAACTGGGCAGTGCTGGTTGATACGTCCCGC TTT TGGTTCAACTATCGACATATTGCAAATGTTCTCTCCGTATACCGTTCCGTGAAGC GCTGGGCATCCC GGACAGTCAGATACTGC TCATGGTGGCGGACGATATGGCGTGCAATGCGCGCAATCCACGGCCAGCCACAGTTTTCAACAATGCAAAACAACACATCAACGTGTACGGGTC GGATGTCGAGGTGGACTACCGGGGCTACGAGGTGACGGTGGAAAATT TCGTACGACTACTGAC GGGCCGAAACGAAAACGGCACTGCCCGTTCGAAGCGAT TGCTTTCCGACTCGGGAAGTAACGTG CTGATATACCTGACCGGTCAC GAGGGGATGGA TTTCTTAAGTT TCA AGACTCGGAGGAAATTACAA ATC AGGAGTTGGCTGATGCGATCGAGCAGATGTGGCAGAAGCAACGGTACAACGAGCTGTTCTTCATGATCGACACTTGCCAAGCCGCCTCAATGTATGAAAAGTTCTACTCT CCGAACATACTTG CCGTGG CCAGCAGTTTGGTGGGAGAGGATTCATTGTCGCATCACATCGATCCGGCCATCGGTGTGTACATTATCGACCGCTACACGTACAATGCACTCGAGTTTTTTGGAGCGCGTTGAGTGGAACAGCAAGAAGACAATGGGCGATTTTCTTTCCGTTTGTCCTAAGCGAGCGTGCATt ] [+] EMBL CNS09HR9 [ ATGTGGCTTCTTCATGGATTTCTGGTCATTAGTTGGGGTTTGCTCGCTTCTTCAAACGAAATAGAGCTACCCGCCAAGTTTGTTACCAGCAGTTCGCACACAAACAACTGGGCAGTGCTGGTTGATACGTCCCGC TTT TGGTTCAACTATCGACATATTGCAAATGTTCTCTCCGTATACCGTTCCGTGAAGC GGCTGGGCATCCC GGACAGTCAGATACTGC TCATGGTGGCGGACGATATGGCGTGCAATGCGCGCAATCCACGGCCAGCCACAGTTTTCAACAATGCAAAACAACACATCAACGTGTACGGGTC GGATGTCGAGGTGGACTACCGGGGCTACGAGGTGACGGTGGAAAATT TCGTACGACTACTGAC GGGCCGAAACGAAAACGGCACTGCCCGTTCGAAGCGAT TGCTTTCCGACTCGGGAAGTAACGTG CTGATATACCTGACCGGTCAC GAGGGGATGGA TTTCTTAAGTT TCA AGACTCGGAGGAAATTACAA ATC AGGAGTTGGCTGATGCGATCGAGCAGATGTGGCAGAAGCAACGGTACAACGAGCTGTTCTTCATGATCGACACTTGCCAAGCCGCCTCAATGTATGAAAAGTTCTACTCT CCGAACATACTTG CCGTGG CCAGCAGTTTGGTGGGAGAGGATTCATTGTCGCATCACATCGATCCGGCCATCGGTGTGTACATTATCGACCGCTACACGTACAATGCACTCGAG TTTTTGGAGCGCGTGGAGTGGAACAGCAAGAAGACAATGGGCGATTTTCTTTCCGTTTGTCCTAAGCGAGCGTGCATCTCGACGGTGGGTGTAAGGAAGGATCTTTACCCGAAGAATCCCTACAAAGTTCCTATAACGGATTTCTTCGGTTCCATTCGTCCGACAGAGATTTCATCCGACGTAGTAAACGTGACACTGTCAACCATTCCAGAAGTATTGTCATCGCCAAAGCCAATCAGCAAACCAAAT ] [+] EMBL CNS08MNM [ TGTGGCTTCTTCATGGATTTCTGGTCATTAGTTGGGGTTTGCTCGCTTCTTCAAACGAAATAGAGCTACCCGCCAAGTTTGTTACCAGCAGTTCGCACACAAACAACTGGGCAGTGCTGGTTGATACGTCCCGC TTT TGGTTCAACTATCGACATATTGCAAATGTTCTCTCCGTATACCGTTCCGTGAAGC GGCTGGGCATCCC GGACAGTCAGATACTGC TCATGGTGGCGGACGATATGGCGTGCAATGCGCGCAATCCACGGCCAGCCACAGTTTTCAACAATGCAAAACAACACATCAACGTGTACGGGTC GGATGTCGAGGTGGACTACCGGGGCTACGAGGTGACGGTGGAAAATT TCGTACGACTACTGAC GGGCCGAAACGAAAACGGCACTGCCCGTTCGAAGCGAT TGCTTTCCGACTCGGGAAGTAACGTG CTGATATACCTGACCGGTCACGGAGGGGATGGA TTTCTTAAGTT TCA AGACTCGGAGGAAATTACAA ATC AGGAGTTGGCTGATGCGATCGAGCAGATGTGGCAGAAGCAACGGTACAACGAGCTGTTCTTCATGATCGACACTTGCCAAGCCGCCTCAATGTATGAAAAGTTCTACTCT CCGAACATACTTG CCGTGG CCAGCAGTTTGGTGGGAGAGGATTCATTGTCGCATCACATCGATCCGGCCATCGGTGTGTACATTATCGACCGCTACACGTACAATGCACTCGAG TTTTTGGAGCGCGTGGAGTGGAACAGCAAGAAGACAATGGGCGATTTTCTTTCCGTTTGTCCTAAGCGAGCGTGCATCTCGACGGTGGGTGTAAGGAAGGATCTTTACCCGAA GATCCCTACAAAGTTCCTATAACGGATTTCTTCGGTTCCATTCGTCCGACAGAGATTTCATCCGACGTA TAAACGCGACACTGTCAACCATTCCAGAAGTATTGTCATC ] [+] EMBL CNS08D9Z [ GTGGCTTCTTCATGGATTTCTGGTCATTAGTTGGGGTTTGCTCGCTTCTTCAAACGAAATAGAGCTACCCGCCAAGTTTGTTACCAGCAGTTCGCACACAAACAACTGGGCAGTGCTGGTTGATACGTCCCGC TTT TGGTTCAACTATCGACATATTGCAAATGTTCTCTCCGTATACCGTTCCGTGAAGC GCTGGGCATCCC GGACAGTCAGATACTGC TCATGGTGGCGGACGATATGGCGTGCAATGCGCGCAATCCACGGCCAGCCACAGTTTTCAACAATGCAAAACAACACATCAACGTGTACGGGTC GGATGTCGAGGTGGACTACCGGGGCTACGAGGTGACGGTGGAAAATT TCGTACGACTACTGAC GGGCCGAAACGAAAACGGCACTGCCCGTTCGAAGCGAT TGCTTTCCGACTCGGGAAGTAACGTG CTGATATACCTGACCGGTCAC GAGGGGATGGA TTTCTTAAGTT TCA AGACTCGGAGGAAATTACAA ATC AGGAGTTGGCTGATGCGATCGAGCAGATGTGGCAGAAGCAACGGTACAACGAGCTGTTCTTCATGATCGACACTTGCCAAGCCGCCTCAATGTATGAAAAGTTCTACTCT CCGAACATACTTG CCGTGG CCAGCAGTTTGGTGGG ] [+] EMBL CNS08EF5 [ GGGTTTGCTCGCTTCTTCAAACGAAATAGAGCTACCCGCCAAGTTTGTTACCAGCAGTTCGCACACAAACAACTGGGCAGTGCTGGTTGATACGTCCCGC TTT TGGTTCAACTATCGACATATTGCAAATGTTCTCTCCGTATACCGTTCCGTGAAGC GCTGGGCATCCC GGACAGTCAGATACTGC TCATGGTGGCGGACGATATGGCGTGCAATGCGCGCAATCCACGGCCAGCCACAGTTTTCAACAATGCAAAACAACACATCAACGTGTACGGGTC GGATGTCGAGGTGGACTACCGGGGCTACGAGGTGACGGTGGAAAATT TCGTACGACTACTGACGGGGCCGAAACGAAAACGGCACTGCCCGTTCGAAGCGAT TGCTTTCCGACTCGGGAAGTAACGTG CTGATATACCTGACCGGTCACGGAGGGGATGGATTTTCTTAAGTT TCA AGACTCGGAGGAAATTACAA ATC AGGAGTTGGCTGATGCGATCGAGCAGATGTGGCAGAAGCAACGGTACAACGAGCTGTTCTTCATGATCGACACTTGCCAAGCCGCCTC ] [-] EMBL CNS08MNN [ CTGGGCAGTGCTGGTTGATACGTCCCGC TTT TGGTTCAACTATCGACATATTGCAAATGTTCTCTCCGTATACCGTTCCGTGAAGC GGCTGGGCATCCC GGACAGTCAGATACTGC TCATGGTGGCGGACGGTATGGCGTGCAATGCGCGCAATCCACGGCCAGCCACAGTTTTCAACAATGCAAAACAAAACATCAACGTGTACGGGTC GGATGTCGAGGTGGACTACCGGGGCTACGAGGTGACGGTGGAAAATT TCGTACGACTACTGAC GGGCCGAAACGAAAACGGCACTGCCCGTTCGAAGCGAT TGCTTTCCGACTCGGGAAGTAACGTG CTGATATACCTGACCGGTCACGGAGGGGATGGA TTTCTTAAGTT TCA AGACTCGGAGGAAATTACAA ATC AGGAGTTGGCTGATGCGATCGAGCAGATGTGGCAGAAGCAACGGTACAACGAGCTGTTCTTCATGATCGACACTTGCCAAGCCGCCTCAATGTATGAAAAGTTCTACTCT CCGGACATACTTG CCGTGG CCAGCAGTTTGGTGGGAGAGGATTCATTGTCGCATCACATCGATCCGGCCATCGGTGTGTACATTATCGACCGCTACACGTACAATGCACTCGAG TTTTTGGAGCGCGTGGAGTGGAACAGCAAGAAGACAATGGGCGATTTTCTTTCCGTTTGTCCTAAGCGAGCGTGCATCTCGACGGTGGGTGTAAGGAAGGATCTTTACCCGAAGGATCCCTACAAAGTTCCTATAACGGATTTCTTCGGTTCCATTCGTCCGACAGAGATTTCATCCGACGTAGTCAACGCGAAACTGTCAACCATTCCAGAAGTATTGTCATCGCCAAAGCCAATCAGCAAACCAAATGCTCAACTGTTTTACGAACAGTTTCCAACCAAACTGTTTCAGCGATCCTAGTTTGGGCCA ] [-] EMBL CNS09KHN [ TGGTTGATACGTCCCGC TTT TGGTTCAACTATCGACATATTGCAAATGTTCTCTCCGTATACCGTTCCGTGAAGC GGCTGGGCATCCC GGACAGTCAGATACTGC TCATGGTGGCGGACGTTATGGCGTGCAATGCGCGCAATCCACGGCCAGCCACAGTTTTCAACAATGCAAAACAACACATCAACGTGTACGGGTC GGATGTCGAGGTGGACTACCGGGGCTACGAGGTGACGGTGGAAAATT TCGTACGACTACTGAC GGGCCGAAACGAAAACGGCACTGCCCGTTCGAAGCGAT TGCTTTCCGACTCGGGAAGTAACGTG CTGATATACCTGACCGGTCACGGAGGGGATGGA TTTCTTAAGTT TCA AGACTCGGAGGAAATTACAA ATC AGGAGTTGGCTGATGCGATCGAGCAGATGTGGCAGAAGCAACGGTACAACGAGCTGTTCTTCATGATCGACACTTGCCAAGCCGCCTCAATGTATGAAAAGTTCTACTCT CCGAACATACTTG CCGTGG CCAGCAGTTTGGTGGGAGAGGATTCATTGTCGCATCACATCGATCCGGCCATCGGTGTGTACATTATCGACCGCTACACGTACAATGCACTCGAG TTTTTGGAGCGCGTGGAGTGGAACAGCAAGAAGACAATGGGCGATTTTCTTTCCGTTTGTCCTAAGCGAGCGTGCATCTCGACGGTGGGTGTAAGGAAGGATCTTTACCCGAAGGATCCCTACAAAGTTCCTATAACGGATTTCTTCGGTTCCATTCGTCCGACAGAGATTTCATCCGACGTAGTCAACGTGACACTGTCAACCATTCCAGAAGTATTGTCATCGCCAAAGCCAATCAGCAAACCAAATGCTCAACTGTTTTACGAACAGTTTCCAACCAAACTGTTTCAGCGATCCTAGTTTGGGCCAGTAGCAAATAAAATCTG ] [-] EMBL CNS09HRA [ TT TGGTTCAACTATCGACATATTGCAAATGTTCTCTCCGTATACCGTTCCGTGAAGC GGCTGGGCATCCC GGACAGTCAGATACTGC TCATGGTGGCGGACGTTATGGCGTGCAATGCGCGCAATCCACGGCCAGCCACAGTTTTCAACAATGCAAAACAAAACATCAACGTGTACGGGTC GGATGTCGAGGTGGACTACCGGGGCTACGAGGTGACGGTGGAAAATT TCGTACGACTACTGAC GGGCCGAAACGAAAACGGCACTGCCCGTTCGAAGCGAT TGCTTTCCGACTCGGGAAGTAACGTG CTGATATACCTGACCGGTCACGGAGGGGATGGA TTTCTTAAGTT TCA AGACTCGGAGGAAATTACAA ATC AGGAGTTGGCTGATGCGATCGAGCAGATGTGGCAGAAGCAACGGTACAACGAGCTGTTCTTCATGATCGACACTTGCCAAGCCGCCTCAATGTATGAAAAGTTCTACTCT CCGGACATACTTG CCGTGG CCAGCAGTTTGGTGGGAGAGGATTCATTGTCGCATCACATCGATCCGGCCATCGGTGTGTACATTATCGACCGCTACACGTACAATGCACTCGAG TTTTTGGAGCGCGTGGAGTGGAACAGCAAGAAGACAATGGGCGATTTTCTTTCCGTTTGTCCTAAGCGAGCGTGCATCTCGACGGTGGGTGTAAGGAAGGATCTTTACCCGAAGGATCCCTACAAAGTTCCTATAACGGATTTCTTCGGTTCCATTCGTCCGACAGAGATTTCATCCGACGTAGTCAACGTGAAACTGTCAACCATTCCAGAAGTATTGTCATCGCCAAAGCCAATCAGCAAACCAAATGCTCAACTGTTTTACGAACAGTTTCCAACCAAACTGTTTCCGCGATCCTTGTTTGGGCCAGTAGCAAATAAAATCTGAACAAAACAAACGA ] [-] EMBL CNS090B2 [ GCCAGCCACAG TTTCAACAATGCAAAACAACACATCAACGTGTACGGGTC GGATGTCGAGGTGGACTACCGGGGCTACGAGGTGACGGTGGAAAATT TCGTACGACTACTGAC GGGCCGAAACGAAAACGGCACTGCCCGTTCGAAGCGAT TGCTTTCCCACTCGGGAAGTAACGTG CTGATATACCTGACCGGTCACGGAGGGGATGGA TTTCTTAAGTT TCA AGACTCGGAGGAAATTACAA ATC AGGAGTTGGCTGATGCGATCGAGCAGATGTGGCAGAAGCAACGGTACAACGAGCTGTTCTTCATGATCGACACTTGCCAAGCCGCCTCAATGTATGAAAAGTTCTACTCT CCGCACATACTTG CCGTGG CCAGCAGTTTGGTGGGAGAGGATTCATTGTCGCATCACATCGATCCGGCCATCGGTGTGTACATTATCGACCGCTACACGTACAATGCACTCGAG TTTTTGGAGCGCGTGGAGTGGAACAGCAAGAAGACAATGGGCGATTTTCTTTCCGTTTGTCCTAAGCGAGCGTGCATCTCGACGGTGGGTGTAAGGAAGGATCTTTACCCGAAGGATCCCTACAAAGTTCCTATAACGGATTTCTTCGGTTCCATTCGTCCGACAGAGATTTCATCCGACGTAGTCAACGTGACACTGTCAACCATTCCAGAAGTATTGTCATCGCCAAAGCCAATCAGCAAACCAAATGCTCAACTGTTTTACGAACAGTTTCCAACCAAACTGTTTCAGCGATCCTAGTTTGGGCCAGTAGCAAATAAAATCTGAACAAAACAATAGACAAGAAAAT ] [-] EMBL CNS08KRJ [ TC GGTTTTCGAGGTGGACTACCGGGGCTACGAGGTGACGGTGGAAAATT TCGTACAACTACTGAC GGGCCGAAACGAAAACGGGACTGCCCGTTCGAAGCGAT TGCTTTCCCACTCGGGAAGTAACGTG CTGATATACCTGACCGGTCACGGAGGGGATGGA TTTCTTAAGTT TCA AAACTCGGAGGAAATTACAA ATC AGGAGTTGGCTAATGCGATCGGGCAGATGTGGCAGAAGCAACGGTAC ] [-] EMBL CNS08SDQ [ CGAGGTGACGGTGGAAAATT TCGTACGACAACTGAC GGGCCGAAACGAAAACGGAACTGCCCGTTCGAAGCGAT TGCTTTCCGACTCGGGAAGTAACGTG CTGATATACCTGACCGGTCACGGAGGGGATGGA TTTCTTAAGTT TCA AGACTCGGAGGAAATTACAA ATC AGGAGTTGGCTGATGCGATCGAGCAGATGTGGCAGAAGCAACGGTACAACGAGCTGTTCTTCATGATCGACACTTGCCAAGCCGCCTCAATGTATGGGAAGTTCTACTCT CCGAACATACTTG CCGTGG CCAGCAGTTTGGTGGGAGAGGATTCATTGTCGCATAACATCGATCCGGCCATCGGTGTGTACATTATCGACCGCTACACGTACAATGCACTCGAG TTTTTGGAGCGCGTGGAGTGGAACAGCAAGAAGACAATGGGCGATTTTCTTTCCGTTTGTCCTAAGCGAGCGTGCATCTCGACGGTGGGTGTAAGGAAGGATCTTTACCCGAAGGATCCCTACAAAGTTCCTATAACGGATTTCTTCGGTTCCATTCGTCCGACAGAGATTTCATCCGACGTAGTCAACGTGACACTGTCAACCATTCCAGAAGTATTGTCATCGCCAAAGCCAATCAGCAAACCAAATGCTCAACTGTTTTACGAACAGTTTCCAACCAAACTGTTTCAGCGATCCTAGTTTGGGCCAGTAGCAAATAAAATC ] [-] EMBL CNS08EF6 [ TACTCTCCCGAACATACTTGCCCGTGGGCCCAGCAGTTTGGTGGGAGAGGATTCATTGTCGCATCACATCGATCCGGCAATCGGTGTGTACATTATCGACCGCTACACGTACAATGCACTCGAG TTTTTGGAGCGCGTGGAGTGGAACAGCAAGAAGACAATGGGCGATTTTCTTTCCGTTTGTCCTAAGCGAGCGTGCATCTCGACGGTGGGTGTAAGGAAGGATCTTTACCCGAAGGATCCCTACAAAGTTCCTATAACGGATTTCTTCGGTTCCATTCGTCCGACAGAGATTTCATCCGACGTAGTCAACGTGACACTGTCAACCATTCCAGAAGTATTGTCATCGCCAAAGCCAATCAGCAAACCAAATGCTCAACTGTTTTACGAACAGTTTCCAACCAAACTGTTTCAGCGATCCTAGTTTGGG ] [-] EMBL CNS09R45 [ GTCGCATAACATCGATCCGGCCATCGGTGTGTACATTATCGACCGCTAAACGTACAATGAACTCGAG TTTTTGGAGCGCGTGGAGTGGGACAGCAAGAAGACAATGGGCGATTTTCTTTCCGTTTGTCCTAAGCGAGCGTGCATCTCGACGGTGGGTGTAAGGAAGGATCTTTACCCGAAGGATCCCTACAAAGTTCCTATAACGGATTTCTTCGGTTCCATTCGTCCCACAGAGATTTCATCCGACGTAGTCAACGTGAAACTGTCAACCATTCCAGAAGTATTGTCATCGCCAAAGCCAATCAGCAAACCAAATGCTCAACTGTTTTACGAACAGTTTCCAACCAAACTGTTTCAGCGATCCTAGTTTGGGCCAGTAGCAAATAAAATCTGAACAAAACAAACGACAAGAAAATCAATAAAAAAAA] [-] EMBL CNS08DA0 [ CGGTTCCATTCGTCCGACAGAGATTTCATCCGACGTAGTCAACGTGACACTGTCAACCATTCCAGAAGTATTGTCATCGCCAAAGCCAATCAGCAAACCAAATGCTCAACTGTTTTACGAACAGTTTCCAACCAAACTGTTTCAGCGATCCTAGTTT ] consensusID : consensus_9852#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 947 fasta sequence [CTTTAAAAAACAAAGAATGTGGCTTCTTCATGGATTTCTGGTCATTAGTTGGGGTTTGCTCGCTTCTTCAAACGAAATAGAGCTACCCGCCAAGTTTGTTACCAGCAGTTCGCACACAAACAACTGGGCAGTGCTGGTTGATACGTCCCGCTTTTGGTTCAACTATCGACATATTGCAAATGTTCTCTCCGTATACCGTTCCGTGAAGCGCTGGGCATCCCGGACAGTCAGATACTGCTCATGGTGGCGGACGATATGGCGTGCAATGCGCGCAATCCACGGCCAGCCACAGTTTTCAACAATGCAAAACAACACATCAACGTGTACGGGTCGGATGTCGAGGTGGACTACCGGGGCTACGAGGTGACGGTGGAAAATTTCGTACGACAATTGACGGGCCGAAACGAAAACGGCACTGCCCGTTCGAAGCGATTGCTTTCCGACTCGGGAAGTAACGTGCTGATATACCTGACCGGTCACGAGGGGATGGATTTCTTAAGTTTCAAGACTCGGAGGAAAATTACAAATCAGGAGTTGGCTGATGCGATCGAGCAGATGTGGCAGAAGCAACGGTACAACGAGCTGTTCTTCATGATCGACACTTGCCAAGCCGCCTCAATGTATGAAAAGTTCTACTCTCCGAACATACTTGCCGTGGCCAGCAGTTTGGTGGGAGAGGATTCATTGTCGCATCACATCGATCCGGCCATCGGTGTGTACATTATCGACCGCTACACGTACAATGCACTCGAGTTTTTGGAGCGCGTGGAGTGGAACAGCAAGAAGACAATGGGCGATTTTCTTTCCGTTTGTCCTAAGTTAGCGTGCATCTCGACGGTGGGTGTAAGGAAGGATCTTTACCCGAAGATCCCTACAAAGTTCCTATAACGGATTTCTTCGGTTCCATTCGTCCGACAGAGATTTCATCCGACGTATAAACGTGACAC] [+] EMBL CNS08KRI [CTTTAAAAAACAAAGAATGTGGCTTCTTCATGGATTTCTGGTCATTAGTTGGGGTTTGCTCGCTTCTTCAAACGAAATAGAGCTACCCGCCAAGTTTGTTACCAGCAGTTCGCACACAAACAACTGGGCAGTGCTGGTTGATACGTCCCGCTTTTGGTTCAACTATCGACATATTGCAAATGTTCTCTCCGTATACCGTTCCGTGAAGCGCTGGGCATCCCGGACAGTCAGATACTGCTCATGGTGGCGGACGATATGGCGTGCAATGCGCGCAATCCACGGCCAGCCACAGTTTTCAACAATGCAAAACAACACATCAACGTGTACGGGTCGGATGTCGAGGTGGACTACCGGGGCTACGAGGTGACGGTGGAAAATTTCGTACGACAATTGACGGGCCGAAACGAAAACGGCACTGCCCGTTCGAAGCGATTGCTTTCCGACTCGGGAAGTAACGTGCTGATATACCTGACCGGTCACGAGGGGATGGATTTCTTAAGTTTCAAGACTCGGAGGAAAATTACAAATCAGGAGTTGGCTGATGCGATCGAGCAGATGTGGCAGAAGCAACGGTACAACGAGCTGTTCTTCATGATCGACACTTGCCAAGCCGCCTCAATGTATGAAAAGTTCTACTCTCCGAACATACTTGCCGTGGCCAGCAGTTTGGTGGGAGAGGATTCATTGTCGCATCACATCGATCCGGCCATCGGTGTGTACATTATCGACCGCTACACGTACAATGCACTCGAGTTTTTGGAGCGCGTGGAGTGGAACAGCAAGAAGACAATGGGCGATTTTCTTTCCGTTTGTCCTAAGTTAGCGTGCATCTCGACGGTGGGTGTAAGGAAGGATCTTTACCCGAAGATCCCTACAAAGTTCCTATAACGGATTTCTTCGGTTCCATTCGTCCGACAGAGATTTCATCCGACGTATAAACGTGACAC] consensusID : consensus_9852#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 432 fasta sequence [TCTATATTTCTTTAGGTCATCGCCAAATCCAATCAGCAAACCAAATGCTCAACTGTTTTACGAACAGTTTCCAACCAAACTGTTTCAGCGATCCTAGTTTGGGCCAGTAGCAAATAAAATCTGAACAAAACAAACGACAAGAAAATCAACTACTCTTTGTGGCCATTACTTCACGCTTTTCCATCGCTGATTCGAATCGTTCCGGACTTGTACTCCGTTAGCAATGAGTTTTCGGCATCGCCAAGTTTCTTCAGACCCGCGATGAATTGCTGATTTTCCAAATTATCATCACACAGGTTGTGTATTGCCAGAATGCTCCATTCCTTTATAAGCGGATTGCGAGCGTCCAGGTTGGTGCATTCAAGAATAGCCGCAATGATGTCCATCTCTCGGGCAAGTTTCTGATTTTTCTTCGACCGGACGCGTGGGCGG] [-] EMBL BM602057 [TCTATATTTCTTTAGGTCATCGCCAAATCCAATCAGCAAACCAAATGCTCAACTGTTTTACGAACAGTTTCCAACCAAACTGTTTCAGCGATCCTAGTTTGGGCCAGTAGCAAATAAAATCTGAACAAAACAAACGACAAGAAAATCAACTACTCTTTGTGGCCATTACTTCACGCTTTTCCATCGCTGATTCGAATCGTTCCGGACTTGTACTCCGTTAGCAATGAGTTTTCGGCATCGCCAAGTTTCTTCAGACCCGCGATGAATTGCTGATTTTCCAAATTATCATCACACAGGTTGTGTATTGCCAGAATGCTCCATTCCTTTATAAGCGGATTGCGAGCGTCCAGGTTGGTGCATTCAAGAATAGCCGCAATGATGTCCATCTCTCGGGCAAGTTTCTGATTTTTCTTCGACCGGACGCGTGGGCGG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9852#0 CCGCGGAGGCGTGAACTCCGCCCGGTGGAAAGTGGTACTGCCTTTTGCGCAAAGAATGTG 60 consensus_9852#1 ---------------------------------------CTTTAAAAAACAAAGAATGTG 21 consensus_9852#2 ------------------------------------------------------------ consensus_9852#0 GCTTCTTCATGGATTTCTGGTCATTAGTTGGGGTTTGCTCGCTTCTTCAAACGAAATAGA 120 consensus_9852#1 GCTTCTTCATGGATTTCTGGTCATTAGTTGGGGTTTGCTCGCTTCTTCAAACGAAATAGA 81 consensus_9852#2 ------------------------------------------------------------ consensus_9852#0 GCTACCCGCCAAGTTTGTTACCAGCAGTTCGCACACAAACAACTGGGCAGTGCTGGTTGA 180 consensus_9852#1 GCTACCCGCCAAGTTTGTTACCAGCAGTTCGCACACAAACAACTGGGCAGTGCTGGTTGA 141 consensus_9852#2 ------------------------------------------------------------ consensus_9852#0 TACGTCCCGCTTTTGGTTCAACTATCGACATATTGCAAATGTTCTCTCCGTATACCGTTC 240 consensus_9852#1 TACGTCCCGCTTTTGGTTCAACTATCGACATATTGCAAATGTTCTCTCCGTATACCGTTC 201 consensus_9852#2 ----------------------------------------------TCTATATTTCTTTA 14 ** *** * ** consensus_9852#0 CGTGAAGCGGCTGGGCATCCCGGACAGTCAGATACTGCTCATGGTGGCGGACGATATGGC 300 consensus_9852#1 CGTGAAGCG-CTGGGCATCCCGGACAGTCAGATACTGCTCATGGTGGCGGACGATATGGC 260 consensus_9852#2 GGTCAT-CGCCAAATCCAATCAGCAAACCAAAT---GCTCA-ACTGTTTTACGA-ACAGT 68 ** * ** * * * * * ** ** ***** ** **** * * consensus_9852#0 GTGCAATGCGCGCAATCCACGGCCAGCCACAGTTTTCAACAATGCAAAACAACACATCAA 360 consensus_9852#1 GTGCAATGCGCGCAATCCACGGCCAGCCACAGTTTTCAACAATGCAAAACAACACATCAA 320 consensus_9852#2 TTCCAAC-CAAACTGTTT-CAGCGATCC-TAGTTTGGGCCAGTAGCAAATAAAATCTGAA 125 * *** * * * * ** * ** ***** ** * *** ** * * ** consensus_9852#0 CGTGTACGGGTCGGATGTCGAGGTGGACTACC----GGGGCTACGAGGTGACGGTGGAAA 416 consensus_9852#1 CGTGTACGGGTCGGATGTCGAGGTGGACTACC----GGGGCTACGAGGTGACGGTGGAAA 376 consensus_9852#2 CAAA-ACAAAC--GACAAGAAAATCAACTACTCTTTGTGGCCATTACTTCACGCTTTTCC 182 * ** ** * * ***** * *** * * * *** * consensus_9852#0 ATTTC--GTACGACTACTGACGGGCCGAAACGAAAACGGCACTGCCCGTTCGAAG----C 470 consensus_9852#1 ATTTC--GTACGACAATTGACGGGCCGAAACGAAAACGGCACTGCCCGTTCGAAG----C 430 consensus_9852#2 ATCGCTGATTCGAATCGTTCCGGACTTGTACTCCGTTAGCAATGAGTTTTCGGCATCGCC 242 ** * * *** * *** * ** *** ** **** * consensus_9852#0 GATTGCTTTCCGACTCGGGAAGTAACGTGCTGATATACCTGACCG--GTCACGGAGGGGA 528 consensus_9852#1 GATTGCTTTCCGACTCGGGAAGTAACGTGCTGATATACCTGACCG--GTCACG-AGGGGA 487 consensus_9852#2 AAGTTTCTTCAGACCCGCGA--TGAATTGCTGATTTTCCAAATTATCATCACACAGGTTG 300 * * *** *** ** ** * * ******* * ** * **** *** consensus_9852#0 TGGATTTCTTAAGT-TTCAAGAC--TCGGAGGAAA-TTACAAATCAGGAGTTGGCTGATG 584 consensus_9852#1 TGGATTTCTTAAGT-TTCAAGAC--TCGGAGGAAAATTACAAATCAGGAGTTGGCTGATG 544 consensus_9852#2 TGTATTGCCAGAATGCTCCATTCCTTTATAAGCGGATTGCGAGC---GTCCAGGTTGGTG 357 ** *** * * * ** * * * * * ** * * * ** ** ** consensus_9852#0 CGATCGAGCAGATGTGGCAGAAGCAACGGTACAACGAGCTGTTCTTCATGATCGACACTT 644 consensus_9852#1 CGATCGAGCAGATGTGGCAGAAGCAACGGTACAACGAGCTGTTCTTCATGATCGACACTT 604 consensus_9852#2 CATTCAAGAATA-GCCGCAATGATGTCCATCTCTCGGGCAAGTTTC--TGATTTTTCTTC 414 * ** ** * * * *** * * ** ** * * **** * consensus_9852#0 GCCAAGCCGCCTCAATGTATGAAAAGTTCTACTCTCCGAACATACTTGCCGTGGCCAGCA 704 consensus_9852#1 GCCAAGCCGCCTCAATGTATGAAAAGTTCTACTCTCCGAACATACTTGCCGTGGCCAGCA 664 consensus_9852#2 GACCGGACGCGTGGGCGG------------------------------------------ 432 * * * *** * * consensus_9852#0 GTTTGGTGGGAGAGGATTCATTGTCGCATCACATCGATCCGGCCATCGGTGTGTACATTA 764 consensus_9852#1 GTTTGGTGGGAGAGGATTCATTGTCGCATCACATCGATCCGGCCATCGGTGTGTACATTA 724 consensus_9852#2 ------------------------------------------------------------ consensus_9852#0 TCGACCGCTACACGTACAATGCACTCGAGTTTTTGGAGCGCGTGGAGTGGAACAGCAAGA 824 consensus_9852#1 TCGACCGCTACACGTACAATGCACTCGAGTTTTTGGAGCGCGTGGAGTGGAACAGCAAGA 784 consensus_9852#2 ------------------------------------------------------------ consensus_9852#0 AGACAATGGGCGATTTTCTTTCCGTTTGTCCTAAGCGAGCGTGCATCTCGACGGTGGGTG 884 consensus_9852#1 AGACAATGGGCGATTTTCTTTCCGTTTGTCCTAAGTTAGCGTGCATCTCGACGGTGGGTG 844 consensus_9852#2 ------------------------------------------------------------ consensus_9852#0 TAAGGAAGGATCTTTACCCGAAGGATCCCTACAAAGTTCCTATAACGGATTTCTTCGGTT 944 consensus_9852#1 TAAGGAAGGATCTTTACCCGAAG-ATCCCTACAAAGTTCCTATAACGGATTTCTTCGGTT 903 consensus_9852#2 ------------------------------------------------------------ consensus_9852#0 CCATTCGTCCGACAGAGATTTCATCCGACGTAGTCAACGTGACACTGTCAACCATTCCAG 1004 consensus_9852#1 CCATTCGTCCGACAGAGATTTCATCCGACGTA-TAAACGTGACAC--------------- 947 consensus_9852#2 ------------------------------------------------------------ consensus_9852#0 AAGTATTGTCATCGCCAAAGCCAATCAGCAAACCAAATGCTCAACTGTTTTACGAACAGT 1064 consensus_9852#1 ------------------------------------------------------------ consensus_9852#2 ------------------------------------------------------------ consensus_9852#0 TTCCAACCAAACTGTTTCAGCGATCCTAGTTTGGGCCAGTAGCAAATAAAATCTGAACAA 1124 consensus_9852#1 ------------------------------------------------------------ consensus_9852#2 ------------------------------------------------------------ consensus_9852#0 AACAAACGACAAGAAAATCAATAAAAAAAA 1154 consensus_9852#1 ------------------------------ consensus_9852#2 ------------------------------ |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||