These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9856#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 15 consensus length = 1069 fasta sequence [GTCTTGCATTACCAACCGTTCAGTGAGCACTTGCCGCCCAAACTCGATGATACAGCCGAAACGACTAACATTCAGCTCACCCGCTATGATGGCAAAGGAAGTGAAAGTGCTTGCCGTCAAACCGTTGAAGCCGGAAAAGGGCCAGCAATCGGAACCGGAGGAACAGATGGAAGAGATAACGAACGACAACATGGGCAACACCACCGGGGGCAGCAGCAGCAGCAGCACCGCCATCACCACCACCACCATCAGCCAGGACAAAAATGGCAAAAATGGCAAAAAGACCTACGAGCAGATGATGATCGAAGCAATCACCGAGAACGATCCGCACCGGAAGGGCATTTCGTTTGCGTTGATTAAAAAGTTTATCAAGGGCAAGTACCAAATCGAGACCGAGGTGGCTGCGGTGTACATGAAGCGAGCGTAC-GAAAAGCTGACCACCAAGTCGATCGTTGAGCGGGTGTCGGGAAAGAGCGGTATCAATG-GCAGCATCCGCCTCACCAAAGCGCACGTAGAGAAGGGAAGGAAGCAACAGAGCAAAGGGATCAAGCAGGCCGAGAAAGCAGCAAAGAAGGCGACAAAAACGAAACCGAAAGCGAAGAAGCAGGCGGATCCTAAACCGAAGCAGACCAAAAAGGATAAAAACAACAATGACGGCGAGAAGAAGCAGAAAAAGGAGAAGCCGGCCAAGGCAAAGCCCGCCCAGCCAGTCAAACTGAATCCGAAGAAAACCGCCATTACGAAGACGAAAATCGACCGTTCC-GGGGGGAA-GGTACGGCTTTCGATTGTGTCCTCCATGGATCCCGGGCCGAGCGGTA-GGGCGAAGCCGACATCTAAGGCAGCGAAGGGGGGGAAGGCTGCTAAGACTAAGAGTGACGAAATGAACAAGAAACCAACGGCCGCCAAACCGCAACCTGTCAGGGCGGGCAGAGAGAAGAAGCAATAGAAGGAGGTTGGTTTTACGGTCGGATTATTTAATTTATTACGTATTTGTGTAATTTTACGATGTATGTGTGCCATTTTATGTGCGAATAAACTATGTAATTATTGTGGTTAAGAAAAAAAAAAA] [+] EMBL CNS095AE [GTCTTGCATTACCAACCGTTCAGTGAGCACTTGTCGCCCAAACTCGATGATACAGCCGAAACGACTAACATTCAGCTCACCCGCTATGATGGCAAAGGAAGTGAAAGTGCTTGCCGTCAAACCGTTGAAGCCGGAAAAGGGCCAGCAATCGGAACCGGAGGAACAGATGGAAGAGATAACGAACGACAACATGGGCAACACCACCGGGGGCAGCAGCAGCAGCAGCACCGCCCTCACCACCACCACCATCAGCCAGGACAAAAATGGCAAAAATGACAAAAAGACCTACGAGCAGATGATGATCGAAGCAATCACCGAGAACGATCCGCACCGGAAGGGCATTTCGTTTGCGTTGATTAAAAAGTTTATCAAGGGCAAGTACCAAATCGAGACCGAGGTGGCTGCGGTGTACATGAAGCGAGCGTAC GAAAAGCTGACCACCAAGTCGATCGTTGAGCGGGTGTCGGGAAAGAGCGGTATCAATG GCAGCATCCGCCTCACCAAAGCGCACGTAGAGAAGGGAAGGAAGCAACAGAGCAAAGGGATCAAGCAGGCCGAGAAAGCAGCAAAGAAGGCGACAAAAACGAAACCGAAAGCGAAGAAGCAGGCGGATCCTAAACCGAAGCAGACCAAAAAGGATAAAAACAACAATGACGGCGAGAAGAAGCAGAAAAAGGAGAAGCCGGCCAAGGCAAAGCCCGCCCAGCCAGTCAAACTGAATCCGAAGAAAACCGCCATTACGAAGACGAAAATCGACCGTTCCGGGGGGGAA GGTACGGCTTTCGATTGTCTCCTCCATGGATCCCGGGCCGAGCGGTA GGGCGAA CGAACATCTAAGGCAGCCAAGGGGGGGAAGGCTGCTAAGACTAAGAGTGACGAAATGAACAAGAAACCAACGGCCGCCAAACCGCAACCTGTCAGGGCGGGCAGAGAGAAGAAGCAATAGAAGGAGGTTGGTTTTACGGTCGGATTATTTAATTTATTACGTATTTG ] [+] EMBL BM577343 [ ccgCTTGCCGCCCAAACTCGATGATACAGCCGAAACGACTAACATTCAGCTCACCCGCTATGATGGCAAAGGAAGTGAAAGTGCTTGCCGTCAAACCGTTGAAGCCGGAAAAGGGCCAGCAATCGGAACCGGAGGAACAGATGGAAGAGATAACGAACGACAACATGGGCACCACCACCGGAGGCAGCAGCAGCAGCAGCACCGCCATCACCACCACCACCATCAGCCAGGACAAAAATGGCAAAAATGGCAAAAAGACCTACGAGCAGATGATGATCGAAGCAATCACCGAGAACGATCCGCACCGGAAGGGCATTTCGTTTGCGTTGATTAAAAAGTTTATCAAGGGCAAGTACCAAATCGAGACCGAGGTGGCTGCGGTGTACATGAAGCGAGCGTAC GAAAAGCTGACCACCAAGTCGATCGTTGAGCGGGTGTCGGGAAAGAGCGGCATCAATG GCAGCATCCGTCTCACCAAAGCGCACGTAGACAAGGGAAGGAAGCAACAGAGCAAAGGGATCAAGCAGGCCGAGAAAGCAGCAAAGAAGGCGGCAAAAACGAAACCGAAAGCGAAGAATCAGGCGGATCCTAAACCGAAGCAGACCAAAAAGGATAAAAACAACAATGACGGCGAGAAGAAGCAGAAAAAGGAGAAGCCGGCCAAGGCGAAGCCCGCGCAGCCTGTCA ] [+] EMBL CNS09GPZ [ tcccCCGCCCAAACTCGATGATACAGCCGAAACGACTAACATTCAGCTCACCCGCTATGATGGCAAAGGAAGTGAAAGTGCTTGCCGTCAAACCGTTGAAGCCGGAAAAGGGCCAGCAATCGGAACCGGA GAACAGATGGAAGAGATAACGAACGACAACATGGGCAACACCACCGGGGGCAGCAGCAGCAGCAGCACCGCCATCACCACCACCACCATCAGCCAGGACAAAAATGGCAAAAATGGCAAAAAGACCTACGAGCAGATGATGATCGAAGCAATCACCGAGAACGATCCGCACCGGAAGGGCATTTCGTTTGCGTTGATTAAAAAGTTTATCAAGGGCAAGTACCAAATCGAGACCGAGGTGGCTGCGGTGTACATGAAGCGAGCGTAC GAAAAGCTGACCACCAAGTCGATCGTTGAGCGGGTGTCGGGAAAGAGCGGTATCAATG GCAGCATCCGCCTCACCAAAGCGCACGTAGAGAAGGGAAGGAGGCAACAGAGCAAAGGGATCAAGCAGGCCGAGAAAGCAGCAAAGAAGGCGACAAAAACGAAACCGAAAGCGAAGAAGCAGGCGGATCCTAAACCGAAGCAGACCAAAAAGGATAAAAACAACAATGACGGCGAGAAGAAGCAGAAAAAGGTGTAGTCGGTCAAGGC ] [+] EMBL BM609510 [ ccgTACAGCCGAAACGACTAACATTCAGCTCTCCCGCTATGATGGCAAAGGAAGTAAAAGTGCTTGCCGTCAAACCGCTGAAGCCGGAAAAGGGCCAGCAATCGGAACCGGAGGAACAGATGGAAGAGATAACGAACGACAACATGGGCAACACCACCGGGGGCAGCAGCAGCAGCAGCACCGCCATCACCACCACCACCATCAGCCAGGACAAAAATGGCAAAAATGGCAAAAAGACCTACGAGCAGATGATGATCGAAGCAATCACCGAGAACGATCCGCACCGGAAGGGCATTTCGTTTGCGTTGATTAAAAAGTTTATCAAGGGCAAGTACCAAATCGAGACCGAGGTGGCTGCGGTGTACATGAAGCGAGCGTAC GAAAAGCTGACCACCAAGTCGATCGTTGAGCGGGTGTCGGGAAAGAGCGGTATCAATG GCAGCATCCGCCTCACCAAAGCGCACGTAGACAAGGGAAGGAAGCAACAGAGCAAAGGGATCAAGCAGGCCGAGAAAGCAGCAAAGAAGGCGGCAAAAACGAAACCGAAAGCGAAGAAGCAGGCGGATCCTAAACCGAAGCAGACCAAAAAGGATAAAAACAACAATGACGGCGAGAAGAAGCAGAAAAAGGAGAAGCCGGCCAAGGCGAAGCCCGCGCAGCCCGTCAAACT ] [+] EMBL CNS09K9K [ GCAAAGGAAGTGAAAGTGCTTGCCGTCAAACCGTTGAAGCCGGAAAAGGGCCAGCAATCGGAACCGGA GAACAGATGGAAGAGATAACGAACGACAACATGGGCAACACCACCGGGGGCAGCAGCAGCAGCAGCACCGCCATCACCACCACCACCATCAGCCAGGACAAAAATGGCAAAAATGGCAAAAAGACCTACGAGCAGATGATGATCGAAGCAATCACCGAGAACGATCCGCACCGGAAGGGCATTTCGTTTGCGTTGATTAAAAAGTTTATCAAGGGCAAGTACCAAATCGAGACCGAGGTGGCTGCGGTGTACATGAAGCGAGCGTAC GAAAAGCTGACCACCAAGTCGATCGTTGAGCGGGTGTCGAGAAAGAGCGGTGTCAATG GCAGCATCCGCCTCACCAAAGCGCACGTAGAGAAGGGAAGGAAGCAACAGAGCAAAGGGATCAAGCAGGCCGAGAAAGCAGCAAAGAAGGCGACAAAAACGAAACCGAAAGCGAAGAAGCAGGCGGATCCTAAACCGAAGCAGACCAAAAAGGATAAAAACAACAATGACGGCGAGAAGAAGCAGAAAAAGGAGAAGCCGGCCAAGGCAAAGCCCGCCCAGCCAGTCAAACTGAATCCGAAGAAAACCGCCATTACGAAGACGAAAATCGAACGTTCC GGGGGGAA GGTACGGCTTTCGATTGTGTCCTCCATGGATCCCGGGCCGAGCGGTA GGACAAAa ] [+] EMBL CNS0938D [ AAGGAAGTGAAAGTGCTTGCCGTCAAACCGTTGAAGCCGGAAAAGGGCCAGCAATCGGAACCGGA GAACAGATGGAAGAGATAACGAACGACAACATGGGCAACACCACCGGGGGCAGCAGCAGCAGCAGCACCGCCATCACCACCACCACCATCAGCCAGGACAAAAATGGCAAAAATGGCAAAAAGACCTACGAGCAGATGATGATCGAAGCAATCACCGAGAACGATCCGCACCGGAAGGGCATTTCGTTTGCGTTGATTAAAAAGTTTATCAAGGGCAAGTACCAAATCGAGACCGAGGTGGCTGCGGTGTACATGAAGCGAGCGTAC GAAAAGCTGACCACCAAGTCGATCGTTGAGCGGGTGTCGAGAAAGAGCGGTATCAATG GCAGCATCCGCCTCACCAAAGCGCACGTAGAGAAGGGAAGGAAGCAACAGAGCAAAGGGATCAAGCAGGCCGAGAAAGCAGCAAAGAAGGCGACAAAAACGAAACCGAAAGCGAAGAAGCAGGCGGATCCTAAACCGAAGCAGACCAAAAAGGATAAAAACAACAATGACGGCGAGAAGAAGCAGAAAAAGGAGAAGCCGGCCAAGGCAAAGCCCGCCCAGCCAGTCAAACTGAATCCGAAGAAAACCGCCATTACGAAGACGAAAATCGACCGTTCC GGGGGGAA GGTACGGCTTTCGATTGTGTCCTCCATGGATCCCGGGCCGAGCGGTA GGGCGAA CGAACATCTAAGGCAGCGAA ] [-] EMBL CNS09K9L [ AGGAAGTGAAAGTGCTTGCCGTCAAACCGTTGAAGCCGGAAAAGGGCCAGCAATCGGAACCGGAGGAACAGATGGAAGAGATAACGAACGACAACATGGGCAACACCACCGGGGGCAGCAGCAGCAGCAGCACCGCCATCCCCCCCCCCCCCATCAGCCAGGACAAAAATGGCAAAAATGGCAAAAAGACCTACGAGCAGATGATGATCGAAGCAATCACCGAGAACGATCCGCCCCGGAAGGGCATTTCGTTTGCGTTGATTAAAAAGTTTATCAAGGGCAAGTACCAAATCGAGACCGAGGTGGCTGCGGTGTACATGAAGCGAGCGTACTGAAAAGCTGACCACCAAGTCGATCGTTGAGCGGGTGTCGAGAAAGAGCGGTGTCAATG GCAGCATCCGCCTCACCAAAGCGCACGTAGAGAAGGGAAGGAAGCAACAGAGCAAAGGGATCAAGCAGGCCGAGAAAGCAGCAAAGAAGGCGACAAAAACGAAACCGAAAGCGAAGAAGCAGGCGGATCCTAAACCGAAGCAGACCAAAAAGGATAAAAACAACAATGACGGCGAGAAGAAGCAGAAAAAGGAGAAGCCGGCCAAGGCAAAGCCCGCCCAGCCAGTCAAACTGAATCCGAAGAAAACCGCCATTACGAAGACGAAAATCGA CGTTCC GGGGGGAA GGTACGGCTTTCGATTGTGTCCTCCATGGATCCCGGGCCGAGCGGTA GGGCGAAGCCGACATCTAAGGCAGCGAAGGGGGGGAAGGCTGCTAAGACTAAGAGTGACGAAATGAACAAGAAACCAACGGCCGCCAAACCGCAACCTGTCAGGGCGGGCAGAGAGAAGAAGCAATAGAAGGAGGTTGGTTTTACGGTCGGATTATTTAATTTATTACGTATTTGTGTAATTTTACGATGTATGTGTGCCATTTTATGTGCGAATAAACTATGTAA ] [-] EMBL CNS095AF [ GAAAGTGCTTGCCGTCAAACCGTTGAAGCCGGAAAAGGGCCAGCAATCGGAACCGGAGGAACAGATGGAAGAGATAACGAACGACAACATGGGCAACACCACCGGGGGCAGCAGCAGCAGCAGCACCGCCATCACCACCACCACCATCAGCCAGGACAAAAATGGCAAAAATGACAAAAAGACCTACGAGCAGATGATGATCGAAGCAATCACCGAGAACGATCCGCACCGGAAGGGCATTTCGTTTGCGTTGATTAAAAAGTTTATCAAGGGCAAGTACCAAATCGAGACCGAGGTGGCTGCGGTGTACATGAAGCGAGCGTAC GAAAAGCTGACCACCAAGTCGATCGTTGAGCGGGTGTCGGGAAAGAGCGGTATCAATG GCAGCATCCGCCTCACCAAAGCGCACGTAGAGAAGGGAAGGAAGCAACAGAGCAAAGGGATCAAGCAGGCCGAGAAAGCAGCAAAGAAGGCGACAAAAACGAAACCGAAAGCGAAGAAGCAGGCGGATCCTAAACCGAAGCAGACCAAAAAGGATAAAAACAACAATGACGGCGAGAAGAAGCAGAAAAAGGAGAAGCCGGCCAAGGCAAAGCCCGCCCAGCCAGTCAAACTGAATCCGAAGAAAACCGCCATTACGAAGACGAAAATCGACCGTTCC GGGGGGAA GGTACGGCTTTCGATTGTGTCCTCCATGGATCCCGGGCCGAGCGGTA GGGCGAAGCCGACATCTAAGGCAGCGAAGGGGGGGAAGGCTGCTAAGACTAAGAGTGACGAAATGAACAAGAAACCAACGGCCGCCAAACCGCAACCTGTCAGGGCGGGCAGAGAGAAGAAGCAATAGAAGGAGGTTGGTTTTACGGTCGGATTATTTAATTTATTACGTATTTGTGTAATTTTACGATGTATGTGTGCCATTTTATGTGCGAATAAACTATGTAAT ] [+] EMBL BM598860 [ CCGGAAAAGGGCCATCAATCGGAACCGGAGGAACAGATGGAAGAGATAACGAACGACAACATGGGCAACACCACCGGGGGCAGCAGCAGCAGCAGCACCGCCATCACCACCACCACCACCAGCCAGGACAAAAATGGCAAAAATGGCAAAAAGACCTACGAGCAGATGATGATCGAAGCAATCACCGAGAACGATCCGCACCGGAAGGGCATTTCGTTTGCGTTGATTAAAAAGTTTATCAAGGGCAAGTACCAAATCGAGACCGAGGTGGCTGCGGTGTACATGAAGCGAGCGTAC GAAAAGCTGACCACCAAGTCGATCGTTGAGCGGGTGTCGGGAAAGAGCGGCACCAAAGCGCAcgtagac ] [+] EMBL CNS09DJH [ GGCAAAAAGACCTACGAGCAGATGATGATCGAAGCAATCACCGAGAACGATCCGCACCGGAAGGGCATTTCGTTTGCGTTGATTAAAAAGTTTATCAAGGGCAAGTACCAAATCGAGACCGAGGTGGCTGCGGTGTACATGAGGCGAGCGTAC GAAAAGCTGACCACCAAGTCGATCGTTGAGCGGGTGTCGGGAAAGAGCGGTATCAATG GCAGCATCCGCCTCACCAAAGCGCACGTAGAGAAGGGAAGGAAGCAACAGAGCAAAGGGATCAAGCAGGCCGAGAAAGCAGCAAAGAAGGCGACAAAAACGAAACCGAAAGCGAAGAAGCAGGCGGATCCTAAACCGAAGCAGACCAAAAAGGATAAAAACAACAATGACGGCGAGAAGAAGCAGAAAAAGGAGAAGCCGGCCAAGGCAAAGCCCGCCCAGCCAGTCAAACTGAATCCGAAGAAAACCGCCATTACGAAGACGAAAA ] [-] EMBL CNS09DJI [ GAAAAGCTGACCACCAAGTCGATCGTTGAGCGGGTGTCGGGAAAGAGCGGTATCAATG GCAGCATCCCCCTCACCAAAGCGCACGTAGAGAAGGGAAGGAAGCAACAGAGCAAAGGGATCAAGCAGGCCGAGAAAGCAGCAAAGAAGGCGACAAAAACGAAACCGAAAGCGAAGAAGCAGGCGGATCCTAAACCGAAGCAGACCAAAAAGGATAAAAACAACAATGACGGCGAGAAGAAGCAGAAAAAGGAGAAGCCGGCCAA GCAAAGCCCGCCCAGCCAGTCAAACTGAATCCGAAGAAAACCGCCATTACGAAGACGAAAATCGACCGTTCC GGGGGGAA GGTACGGCTTTCGATTGTGTCCTCCATGGATCCCGGGCCGAGCGGTAGGGGCGAAGCCGACATCTAAGGCAGCGAAGGGGGGGAAGGCTGCTAAGACTAAGAGTGACGAAATGAACAAGAAACCAACGGCCGCCAAACCGCAACCTGTCAGGGCGGGCAGAGAGAAGAAGCAATAGAAGGAGGTTGGTTTTACGGTCGGATTATTTAATTTATTACGTATTTGTGTAATTTTACGATGTATGTGTGCCATTTTATGTGCGAATAAACT ] [-] EMBL CNS09073 [ GTTGAGCGGGTGTCGGGAAAGAGCGGCATCAATG GCAGCATCCGTCTCACCAAAGCGCACGTAGACAAGGGAGGGAAGCAACAGAGCAAAGGGATCAAGCAGGCCGAGAAAGCAGCAAAGAAGGCGGCAAAAACGAAACCGAAAGCGAAGAATCAGGCGGATCCTAAACCGAAGCAGACCAAAAAGGATAAAAACAACAATGACGGCGAGAAGAAGCAGAAAAAGGAGAAGCCGGCCAAGGCGAAGCCCGCGCAGCCTGTCAAACTGAATCCGAAGAAAACCGCCATTACGAAGACGAAAATCGA CGTTCC GGGGGGAA GGTACGGCTTTCGATTGTGTCCTCCACGGATCCGGGGCCGAGCGGTA GGGCGAAGCCGACATCTAAGGCAGCGAAGGGGGGGAAGGCTGCTAAGACTAAGAGTGACGAAATGAACAGGAAACCAACGGCCGCCAAACCGCAACCTGTCAGGGCGGGCAGAGAGAAGAAGCAATAGAAGGAGGTTGGTTTTACGCTCGGATTATTTAATTTATTACGTATTTGTGTGATTTTACGATGTATGCGTGCCATTTTATGTGCGAATAAACTATGTA ] [-] EMBL CNS09GQ0 [ aaaaaccCCTCACCAAAGCGCACGTAGAGAAGGGAAGGAGGCAACAGAGCAAAGGGATCAAGCAGGCCGAGAAAGCAGCAAAGAAGGCGACAAAAACGAAACCGAAAGCGAAGAAGCAGGCGGATCCTAAACCGAAGCAGACCAAAAAGGATAAAAACAACAATGACGGCGAGAAGAAGCAGAAAAAGGAGAAGCCGGCCAA GCAAAGCCCGCCCAGCCAGTCAAACTGAATCCGAAGAAAACCGCCATTACGAAGACGAAAATCGACCGTTCC GGGGGGAA GGTACGGCTTTCGATTGTGTCCTCCATGGATCCCGGGCCGAGCGGTA GGCGAAGCCGACATCTAAGGCAGCGAAGGGGGGGAAGGCTGCTAAGACTAAGAGTGACGAAATGAACAAGAAACCAACGGCCCCCAAACCGCAACCTGTCAGGGCGGGCAGAGAGAAGAAGCAATAGAAGGAGGTTGGTTTTACGGTCGGATTATTTAATTTATTACGTATTTGTGTAATTTTACGATGTATGTGTGCCATTTTATGTGCGAATAAACTATGTAATTATTGTGGTTAAGAAAAAAAAAAA] [-] EMBL CNS093RS [ TCAAGCAGGCCGAGAAAGCAGCAAAGAAGGCGGCAAAAACGAAACCGAAAGCGAAGAATCAGGCGGATCCTAAACCGAAGCAGACCAAAAAGGATAAAAACAACAATGACGGCGAGAAG ATCAGAAAAAGGAGAAGCCGGCCAAGGCGAAGCCCGCGCAGCCTGTCAAACTGAATCCGAAGAAAACCGCCATTACGAAGACGAAAATCGA CGTTCC GGGGGGAAGGGTACGGCCTTCGATTGTGTCCTCCACGGATCCGGGGCCGAGCGGTA GGGCGAAGCCGACATCTAAGGCAGCGAAGGGGGGGAAGGCTGCTAAGACTAAGAGTGACGAAATGAACAGGAAACCAACGGCCGCCAAACCGCAAC ] [-] EMBL CNS0938E [ AAATCGACCGTTCC GGGGGGAA GGTACGGCTTTCGATTGTGTCCTCCATGGATCCCGGGCCGAGCGGTA GGGCGAAGCCGACATCTAAGGCAGCGAAGGGGGGGAAGGCTGCTAAGACTAAGAGTGACGAAATGAACAAGAAACCA ] consensusID : consensus_9856#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 681 fasta sequence [CCGCCCACGCGTCCGCCCACGCGTCCGGGCAAAGGAAGTGAAAGTGCTTGCCGTCAAACCGTTGAAGCCGGAAAAGGGCCAGCAATCGGAACCGGAGGAACAGATGGAAGAGATAACGAACGACAACATGGGCACCACCACCGGAGGCAGCAGCAGCAGCAGCACCGCCATCACCACCACCACCATCAGCCAGGACAAAAATGGCAAAAATGGCAAAAAGACCTACGAGCAGATGATGATCGAAGCAATCACCGAGAACGATCCGCACCGGAAGGGCATTTCGTTTGCGTTGATTAAAAAGTTTATCAAGGGCAAGTACCAAATCGAGACCGAGGTGGCTGCGGTGTACATGAAGCGAGCGTACGAAAAGCTGACCACCAAGTCGATCGTTGAGCGGGTGTCGGGAAAGAGCGGCATCAATGGCAGCATCCGTCTCACCAAAGCGCACGTAGACAAGGGAAGGAAGCAACAGAGCAAAGGGATCAAGCAGGCCGAGAAAGCAGC-AAAGAAGGCGGCAAAAACGAAACCGAAAGCGAAGAATCAGGCGGATCCTAAACCGAAGCAGACCAAAAAGGATAAAAACAACAATGACGGCGAGAAGAAGCAGAAAAAGGAGAAGCCGGCCAAGGCGAAGCCCG-CGCAGCCT-GTCAAACTGAATCCGAAAAAACCGCCATTACGAAG] [+] EMBL BM586565 [CCGCCCACGCGTCCGCCCACGCGTCCGGGCAAAGGAAGTGAAAGTGCTTGCCGTCAAACCGTTGAAGCCGGAAAAGGGCCAGCAATCGGAACCGGAGGAACAGATGGAAGAGATAACGAACGACAACATGGGCACCACCACCGGAGGCAGCAGCAGCAGCAGCACCGCCATCACCACCACCACCATCAGCCAGGACAAAAATGGCAAAAATGGCAAAAAGACCTACGAGCAGATGATGATCGAAGCAATCACCGAGAACGATCCGCACCGGAAGGGCATTTCGTTTGCGTTGATTAAAAAGTTTATCAAGGGCAAGTACCAAATCGAGACCGAGGTGGCTGCGGTGTACATGAAGCGAGCGTACGAAAAGCTGACCACCAAGTCGATCGTTGAGCGGGTGTCGGGAAAGAGCGGCATCAATGGCAGCATCCGTCTCACCAAAGCGCACGTAGACAAGGGAAGGAAGCAACAGAGCAAAGGGATCAAGCAGGCCGAGAAAGCAGC AAAGAAGGCGGCAAAAACGAAACCGAAAGCGAAGAATCAGGCGGATCCTAAACCGAAGCAGACCAAAAAGGATAAAAACAACAATGACGGCGAGAAGAAGCAGAAAAAGGAGAAGCCGGCCAAGGCGAAGCCCG CGCAGCCT GTCAAACTGAATCCGAAAAAACCGCCATTACGAAG] [+] EMBL BM603374 [ CCGGGCAAAGGAAGTGAAAGTGCTTGCCGTCAAACCGTTGAAGCCGGAAAAGGGCCAGCAATCGGAACCGGAGGAACAGATGGAAGAGATAACGAACGACAACATGGGCACCACCACCGGAGGCAGCAGCAGCAGCAGCACCGCCATCACCACCACCACCATCAGCCAGGACAAAAATGGCAAAAATGGCAAAAAGACCTACGAGCAGATGATGATCGAAGCAATCACCGAGAACGATCCGCACCGGAAGGGCATTTCGTTTGCGTTGATTAAAAAGTTTATCAAGGGCAAGTACCAAATCGAGACCGAGGTGGCTGCGGTGTACATGAAGCGAGCGTACGAAAAGCTGACCACCAAGTCGATCGTTGAGCGGGTGTCGGGAAAGAGCGGCATCAATGGCAGCATCCGTCTCACCAAAGCGCACGTAGACAAGGGAAGGAAGCAACAGAGCAAAGGGATCAAGCAGGCCGAGAAAGCAGC AAAGAAGGCGGCAAAAACGAAACCGAAAGCGAAGAATCAGGCGGATCCTAAACCGAAGCAGACCAAAAAGGATAAAAACAACAATGACGGCGAGAAGAAGCAGAAAAAGGAGAAGCCGGCCAAGGCGAAGCCCG CGCAGCCT GTCAAACTGA ] [+] EMBL BM615917 [ CCGGGCAAAGGAAGTGAAAGTGCTTGCCGTCAAACCGTTGAAGCCGGAAAAGGGCCAGCAATCGGAACCGGAGGAACAGATGGAAGAGATAACGAACGACAACATGGGCACCACCACCGGAGGCAGCAGCAGCAGCAGCACCGCCATCACCACCACCACCATCAGCCAGGACAAAAATGGCAAAAATGGCAAAAAGACCTACGAGCAGATGATGATCGAAGCAATCACCGAGAACGATCCGCACCGGAAGGGCATTTCGTTTGCGTTGATTAAAAAGTTTATCAAGGGCAAGTACCAAATCGAGACCGAGGTGGCTGCGGTGTACATGAAGCGAGCGTACGAAAAGCTGACCACCAAGTCGATCGTTGAGCGGGTGTCGGGAAAGAGCGGCATCAATGGCAGCATCCGTCTCACCAAAGCGCACGTAGACAAGGGAAGGAAGCAACAGAGCAAAGGGATCAAGCAGGCCGAGAAAGCAGCGAAAGAAGGCGGCAAAAACGAAACCGAAAGCGAAG ] [+] EMBL CNS09072 [ cgctatgatGGCAAAGGAAGTGAAAGTGCTTGCCGTCAAACCGTTGAAGCCGGAAAAGGGCCAGCAATCGGAACCGGA GAACAGATGGAAGAGATAACGAACGACAACATGGGCACCACCACCGGA GCAGCAGCAGCAGCAGCACCGCCATCACCACCACCACCATCAGCCAGGACAAAAATGGCAAAAATGGCAAAAAGACCTACGAGCAGATGATGATCGAAGCAATCACCGAGAACGATCCGCACCGGAAGGGCATTTCGTTTGCGTTGATTAAAAAGTTTATCAAGGGCAAGTACCAAATCGAGACCGAGGTGGCTGCGGTGTACATGAAGCGAGCGTACGAAAAGCTGACCACCAAGTCGATCGTTGAGCGGGTGTCGGGAAAGAGCGGCATCAATGGCAGCATCCGTCTCACCAAAGCGCACGTAGACAAGGGAGGGAAGCAACAGAGCAAAGGGATCAAGCAGGCCGAGAAAGCAGC AAAGAAGGCGGCAAAAACGAAACCGAAAGCGAAGAATCAGGCGGATCCTAAACCGAAGCAGACCAAAAAGGATAAAAACAACAATGACGGCGAGAAGAAGCAGAAAAAGGAGAAGCCGGCCAAGGCGAA CCCGCCGCAGCCTGGTCAAACTGAATCCGAAga ] [+] EMBL CNS099RK [ GCAATCGGAACCGGA GAACAGAGGGAAGAGATAACGAACGAGAACATGGGCACCACCACCGGA GCAGCAGCAGCAGCAGCACCGCCATCACCACCACCACCATCAGCCAGGACAAAAAGGGCAAAAAGGGCAAAAAGACCTACGAGCAGA ] [+] EMBL CNS093RR [ AGAACGATCCGCACCGGAAGGGCATTTCGTTTGCGTTGATTAAAAAGTTTATCAAGGGCAAGAAACAAATCGAGACCGAGGTGGCTGCGGTGTACATGAAGCGAGC ] consensusID : consensus_9856#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 252 fasta sequence [CAGAATCGCCACGAGGNTGAACAATCACCGAGAACGATCCGCACCGGAAGGGCGTTTCGTTTGCGTTGATTAAAAAGTTTATCAAGGGGCAAGTACCAAATCGAGACCGAGGTGGCTGCGGTGTACATGAAGCGAGCGTACGAAAAGCTGACCACCAAGTCGATCGTTGAGCGGGTGTCGGGAAAGACGCGGCATCAATGGCAGCATCCGCCTCACCAAAGCGCACGTAGACAACGGAAGGAAGCAACAGGA] [+] EMBL BX469357 [CAGAATCGCCACGAGGNTGAACAATCACCGAGAACGATCCGCACCGGAAGGGCGTTTCGTTTGCGTTGATTAAAAAGTTTATCAAGGGGCAAGTACCAAATCGAGACCGAGGTGGCTGCGGTGTACATGAAGCGAGCGTACGAAAAGCTGACCACCAAGTCGATCGTTGAGCGGGTGTCGGGAAAGACGCGGCATCAATGGCAGCATCCGCCTCACCAAAGCGCACGTAGACAACGGAAGGAAGCAACAGGA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9856#0 GTCTTGCATTACCAACCGTTCAGTGAGCACTTGCCGCCCAAACTCGATGATACAGCCGAA 60 consensus_9856#1 ------------------------------------------------------------ consensus_9856#2 ------------------------------------------------------------ consensus_9856#0 ACGACTAACATTCAGCTCACCCGCTATGATGGCAAAGGAAGTGAAAGTGCTTGCCGTCAA 120 consensus_9856#1 CCGCCCACGCGTCCGCCCACGCGTCCG---GGCAAAGGAAGTGAAAGTGCTTGCCGTCAA 57 consensus_9856#2 ------------------------------------------------------------ consensus_9856#0 ACCGTTGAAGCCGGAAAAGGGCCAGCAATCGGAACCGGAGGAACAGATGGAAGAGATAAC 180 consensus_9856#1 ACCGTTGAAGCCGGAAAAGGGCCAGCAATCGGAACCGGAGGAACAGATGGAAGAGATAAC 117 consensus_9856#2 ------------------------------------------------------------ consensus_9856#0 GAACGACAACATGGGCAACACCACCGGGGGCAGCAGCAGCAGCAGCACCGCCATCACCAC 240 consensus_9856#1 GAACGACAACATGGGCACCACCACCGGAGGCAGCAGCAGCAGCAGCACCGCCATCACCAC 177 consensus_9856#2 ------------------------------------------------------------ consensus_9856#0 CACCACCATCAGCCAGGACAAAAATGGCAAAAATGGCAAAAAGACCTACGAGCAGATGAT 300 consensus_9856#1 CACCACCATCAGCCAGGACAAAAATGGCAAAAATGGCAAAAAGACCTACGAGCAGATGAT 237 consensus_9856#2 ----------------------------------------------CAGAATCGCCACGA 14 * * * consensus_9856#0 GATCGAAGCAATCACCGAGAACGATCCGCACCGGAAGGGCATTTCGTTTGCGTTGATTAA 360 consensus_9856#1 GATCGAAGCAATCACCGAGAACGATCCGCACCGGAAGGGCATTTCGTTTGCGTTGATTAA 297 consensus_9856#2 GGNTGAA-CAATCACCGAGAACGATCCGCACCGGAAGGGCGTTTCGTTTGCGTTGATTAA 73 * *** ******************************** ******************* consensus_9856#0 AAAGTTTATCAAGGG-CAAGTACCAAATCGAGACCGAGGTGGCTGCGGTGTACATGAAGC 419 consensus_9856#1 AAAGTTTATCAAGGG-CAAGTACCAAATCGAGACCGAGGTGGCTGCGGTGTACATGAAGC 356 consensus_9856#2 AAAGTTTATCAAGGGGCAAGTACCAAATCGAGACCGAGGTGGCTGCGGTGTACATGAAGC 133 *************** ******************************************** consensus_9856#0 GAGCGTACGAAAAGCTGACCACCAAGTCGATCGTTGAGCGGGTGTCGGGAAAGA-GCGGT 478 consensus_9856#1 GAGCGTACGAAAAGCTGACCACCAAGTCGATCGTTGAGCGGGTGTCGGGAAAGA-GCGGC 415 consensus_9856#2 GAGCGTACGAAAAGCTGACCACCAAGTCGATCGTTGAGCGGGTGTCGGGAAAGACGCGGC 193 ****************************************************** **** consensus_9856#0 ATCAATGGCAGCATCCGCCTCACCAAAGCGCACGTAGAGAAGGGAAGGAAGCAACAGAGC 538 consensus_9856#1 ATCAATGGCAGCATCCGTCTCACCAAAGCGCACGTAGACAAGGGAAGGAAGCAACAGAGC 475 consensus_9856#2 ATCAATGGCAGCATCCGCCTCACCAAAGCGCACGTAGACAACGGAAGGAAGCAACAGGA- 252 ***************** ******************** ** *************** consensus_9856#0 AAAGGGATCAAGCAGGCCGAGAAAGCAGCAAAGAAGGCGACAAAAACGAAACCGAAAGCG 598 consensus_9856#1 AAAGGGATCAAGCAGGCCGAGAAAGCAGCAAAGAAGGCGGCAAAAACGAAACCGAAAGCG 535 consensus_9856#2 ------------------------------------------------------------ consensus_9856#0 AAGAAGCAGGCGGATCCTAAACCGAAGCAGACCAAAAAGGATAAAAACAACAATGACGGC 658 consensus_9856#1 AAGAATCAGGCGGATCCTAAACCGAAGCAGACCAAAAAGGATAAAAACAACAATGACGGC 595 consensus_9856#2 ------------------------------------------------------------ consensus_9856#0 GAGAAGAAGCAGAAAAAGGAGAAGCCGGCCAAGGCAAAGCCCGCCCAGCCAGTCAAACTG 718 consensus_9856#1 GAGAAGAAGCAGAAAAAGGAGAAGCCGGCCAAGGCGAAGCCCGCGCAGCCTGTCAAACTG 655 consensus_9856#2 ------------------------------------------------------------ consensus_9856#0 AATCCGAAGAAAACCGCCATTACGAAGACGAAAATCGACCGTTCCGGGGGGAAGGTACGG 778 consensus_9856#1 AATCCGAA-AAAACCGCCATTACGAAG--------------------------------- 681 consensus_9856#2 ------------------------------------------------------------ consensus_9856#0 CTTTCGATTGTGTCCTCCATGGATCCCGGGCCGAGCGGTAGGGCGAAGCCGACATCTAAG 838 consensus_9856#1 ------------------------------------------------------------ consensus_9856#2 ------------------------------------------------------------ consensus_9856#0 GCAGCGAAGGGGGGGAAGGCTGCTAAGACTAAGAGTGACGAAATGAACAAGAAACCAACG 898 consensus_9856#1 ------------------------------------------------------------ consensus_9856#2 ------------------------------------------------------------ consensus_9856#0 GCCGCCAAACCGCAACCTGTCAGGGCGGGCAGAGAGAAGAAGCAATAGAAGGAGGTTGGT 958 consensus_9856#1 ------------------------------------------------------------ consensus_9856#2 ------------------------------------------------------------ consensus_9856#0 TTTACGGTCGGATTATTTAATTTATTACGTATTTGTGTAATTTTACGATGTATGTGTGCC 1018 consensus_9856#1 ------------------------------------------------------------ consensus_9856#2 ------------------------------------------------------------ consensus_9856#0 ATTTTATGTGCGAATAAACTATGTAATTATTGTGGTTAAGAAAAAAAAAAA 1069 consensus_9856#1 --------------------------------------------------- consensus_9856#2 --------------------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||