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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9856#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 15 consensus length = 1069 fasta sequence
[GTCTTGCATTACCAACCGTTCAGTGAGCACTTGCCGCCCAAACTCGATGATACAGCCGAAACGACTAACATTCAGCTCACCCGCTATGATGGCAAAGGAAGTGAAAGTGCTTGCCGTCAAACCGTTGAAGCCGGAAAAGGGCCAGCAATCGGAACCGGAGGAACAGATGGAAGAGATAACGAACGACAACATGGGCAACACCACCGGGGGCAGCAGCAGCAGCAGCACCGCCATCACCACCACCACCATCAGCCAGGACAAAAATGGCAAAAATGGCAAAAAGACCTACGAGCAGATGATGATCGAAGCAATCACCGAGAACGATCCGCACCGGAAGGGCATTTCGTTTGCGTTGATTAAAAAGTTTATCAAGGGCAAGTACCAAATCGAGACCGAGGTGGCTGCGGTGTACATGAAGCGAGCGTAC-GAAAAGCTGACCACCAAGTCGATCGTTGAGCGGGTGTCGGGAAAGAGCGGTATCAATG-GCAGCATCCGCCTCACCAAAGCGCACGTAGAGAAGGGAAGGAAGCAACAGAGCAAAGGGATCAAGCAGGCCGAGAAAGCAGCAAAGAAGGCGACAAAAACGAAACCGAAAGCGAAGAAGCAGGCGGATCCTAAACCGAAGCAGACCAAAAAGGATAAAAACAACAATGACGGCGAGAAGAAGCAGAAAAAGGAGAAGCCGGCCAAGGCAAAGCCCGCCCAGCCAGTCAAACTGAATCCGAAGAAAACCGCCATTACGAAGACGAAAATCGACCGTTCC-GGGGGGAA-GGTACGGCTTTCGATTGTGTCCTCCATGGATCCCGGGCCGAGCGGTA-GGGCGAAGCCGACATCTAAGGCAGCGAAGGGGGGGAAGGCTGCTAAGACTAAGAGTGACGAAATGAACAAGAAACCAACGGCCGCCAAACCGCAACCTGTCAGGGCGGGCAGAGAGAAGAAGCAATAGAAGGAGGTTGGTTTTACGGTCGGATTATTTAATTTATTACGTATTTGTGTAATTTTACGATGTATGTGTGCCATTTTATGTGCGAATAAACTATGTAATTATTGTGGTTAAGAAAAAAAAAAA]
[+] EMBL CNS095AE [GTCTTGCATTACCAACCGTTCAGTGAGCACTTGTCGCCCAAACTCGATGATACAGCCGAAACGACTAACATTCAGCTCACCCGCTATGATGGCAAAGGAAGTGAAAGTGCTTGCCGTCAAACCGTTGAAGCCGGAAAAGGGCCAGCAATCGGAACCGGAGGAACAGATGGAAGAGATAACGAACGACAACATGGGCAACACCACCGGGGGCAGCAGCAGCAGCAGCACCGCCCTCACCACCACCACCATCAGCCAGGACAAAAATGGCAAAAATGACAAAAAGACCTACGAGCAGATGATGATCGAAGCAATCACCGAGAACGATCCGCACCGGAAGGGCATTTCGTTTGCGTTGATTAAAAAGTTTATCAAGGGCAAGTACCAAATCGAGACCGAGGTGGCTGCGGTGTACATGAAGCGAGCGTAC GAAAAGCTGACCACCAAGTCGATCGTTGAGCGGGTGTCGGGAAAGAGCGGTATCAATG GCAGCATCCGCCTCACCAAAGCGCACGTAGAGAAGGGAAGGAAGCAACAGAGCAAAGGGATCAAGCAGGCCGAGAAAGCAGCAAAGAAGGCGACAAAAACGAAACCGAAAGCGAAGAAGCAGGCGGATCCTAAACCGAAGCAGACCAAAAAGGATAAAAACAACAATGACGGCGAGAAGAAGCAGAAAAAGGAGAAGCCGGCCAAGGCAAAGCCCGCCCAGCCAGTCAAACTGAATCCGAAGAAAACCGCCATTACGAAGACGAAAATCGACCGTTCCGGGGGGGAA GGTACGGCTTTCGATTGTCTCCTCCATGGATCCCGGGCCGAGCGGTA GGGCGAA CGAACATCTAAGGCAGCCAAGGGGGGGAAGGCTGCTAAGACTAAGAGTGACGAAATGAACAAGAAACCAACGGCCGCCAAACCGCAACCTGTCAGGGCGGGCAGAGAGAAGAAGCAATAGAAGGAGGTTGGTTTTACGGTCGGATTATTTAATTTATTACGTATTTG ]
[+] EMBL BM577343 [ ccgCTTGCCGCCCAAACTCGATGATACAGCCGAAACGACTAACATTCAGCTCACCCGCTATGATGGCAAAGGAAGTGAAAGTGCTTGCCGTCAAACCGTTGAAGCCGGAAAAGGGCCAGCAATCGGAACCGGAGGAACAGATGGAAGAGATAACGAACGACAACATGGGCACCACCACCGGAGGCAGCAGCAGCAGCAGCACCGCCATCACCACCACCACCATCAGCCAGGACAAAAATGGCAAAAATGGCAAAAAGACCTACGAGCAGATGATGATCGAAGCAATCACCGAGAACGATCCGCACCGGAAGGGCATTTCGTTTGCGTTGATTAAAAAGTTTATCAAGGGCAAGTACCAAATCGAGACCGAGGTGGCTGCGGTGTACATGAAGCGAGCGTAC GAAAAGCTGACCACCAAGTCGATCGTTGAGCGGGTGTCGGGAAAGAGCGGCATCAATG GCAGCATCCGTCTCACCAAAGCGCACGTAGACAAGGGAAGGAAGCAACAGAGCAAAGGGATCAAGCAGGCCGAGAAAGCAGCAAAGAAGGCGGCAAAAACGAAACCGAAAGCGAAGAATCAGGCGGATCCTAAACCGAAGCAGACCAAAAAGGATAAAAACAACAATGACGGCGAGAAGAAGCAGAAAAAGGAGAAGCCGGCCAAGGCGAAGCCCGCGCAGCCTGTCA ]
[+] EMBL CNS09GPZ [ tcccCCGCCCAAACTCGATGATACAGCCGAAACGACTAACATTCAGCTCACCCGCTATGATGGCAAAGGAAGTGAAAGTGCTTGCCGTCAAACCGTTGAAGCCGGAAAAGGGCCAGCAATCGGAACCGGA GAACAGATGGAAGAGATAACGAACGACAACATGGGCAACACCACCGGGGGCAGCAGCAGCAGCAGCACCGCCATCACCACCACCACCATCAGCCAGGACAAAAATGGCAAAAATGGCAAAAAGACCTACGAGCAGATGATGATCGAAGCAATCACCGAGAACGATCCGCACCGGAAGGGCATTTCGTTTGCGTTGATTAAAAAGTTTATCAAGGGCAAGTACCAAATCGAGACCGAGGTGGCTGCGGTGTACATGAAGCGAGCGTAC GAAAAGCTGACCACCAAGTCGATCGTTGAGCGGGTGTCGGGAAAGAGCGGTATCAATG GCAGCATCCGCCTCACCAAAGCGCACGTAGAGAAGGGAAGGAGGCAACAGAGCAAAGGGATCAAGCAGGCCGAGAAAGCAGCAAAGAAGGCGACAAAAACGAAACCGAAAGCGAAGAAGCAGGCGGATCCTAAACCGAAGCAGACCAAAAAGGATAAAAACAACAATGACGGCGAGAAGAAGCAGAAAAAGGTGTAGTCGGTCAAGGC ]
[+] EMBL BM609510 [ ccgTACAGCCGAAACGACTAACATTCAGCTCTCCCGCTATGATGGCAAAGGAAGTAAAAGTGCTTGCCGTCAAACCGCTGAAGCCGGAAAAGGGCCAGCAATCGGAACCGGAGGAACAGATGGAAGAGATAACGAACGACAACATGGGCAACACCACCGGGGGCAGCAGCAGCAGCAGCACCGCCATCACCACCACCACCATCAGCCAGGACAAAAATGGCAAAAATGGCAAAAAGACCTACGAGCAGATGATGATCGAAGCAATCACCGAGAACGATCCGCACCGGAAGGGCATTTCGTTTGCGTTGATTAAAAAGTTTATCAAGGGCAAGTACCAAATCGAGACCGAGGTGGCTGCGGTGTACATGAAGCGAGCGTAC GAAAAGCTGACCACCAAGTCGATCGTTGAGCGGGTGTCGGGAAAGAGCGGTATCAATG GCAGCATCCGCCTCACCAAAGCGCACGTAGACAAGGGAAGGAAGCAACAGAGCAAAGGGATCAAGCAGGCCGAGAAAGCAGCAAAGAAGGCGGCAAAAACGAAACCGAAAGCGAAGAAGCAGGCGGATCCTAAACCGAAGCAGACCAAAAAGGATAAAAACAACAATGACGGCGAGAAGAAGCAGAAAAAGGAGAAGCCGGCCAAGGCGAAGCCCGCGCAGCCCGTCAAACT ]
[+] EMBL CNS09K9K [ GCAAAGGAAGTGAAAGTGCTTGCCGTCAAACCGTTGAAGCCGGAAAAGGGCCAGCAATCGGAACCGGA GAACAGATGGAAGAGATAACGAACGACAACATGGGCAACACCACCGGGGGCAGCAGCAGCAGCAGCACCGCCATCACCACCACCACCATCAGCCAGGACAAAAATGGCAAAAATGGCAAAAAGACCTACGAGCAGATGATGATCGAAGCAATCACCGAGAACGATCCGCACCGGAAGGGCATTTCGTTTGCGTTGATTAAAAAGTTTATCAAGGGCAAGTACCAAATCGAGACCGAGGTGGCTGCGGTGTACATGAAGCGAGCGTAC GAAAAGCTGACCACCAAGTCGATCGTTGAGCGGGTGTCGAGAAAGAGCGGTGTCAATG GCAGCATCCGCCTCACCAAAGCGCACGTAGAGAAGGGAAGGAAGCAACAGAGCAAAGGGATCAAGCAGGCCGAGAAAGCAGCAAAGAAGGCGACAAAAACGAAACCGAAAGCGAAGAAGCAGGCGGATCCTAAACCGAAGCAGACCAAAAAGGATAAAAACAACAATGACGGCGAGAAGAAGCAGAAAAAGGAGAAGCCGGCCAAGGCAAAGCCCGCCCAGCCAGTCAAACTGAATCCGAAGAAAACCGCCATTACGAAGACGAAAATCGAACGTTCC GGGGGGAA GGTACGGCTTTCGATTGTGTCCTCCATGGATCCCGGGCCGAGCGGTA GGACAAAa ]
[+] EMBL CNS0938D [ AAGGAAGTGAAAGTGCTTGCCGTCAAACCGTTGAAGCCGGAAAAGGGCCAGCAATCGGAACCGGA GAACAGATGGAAGAGATAACGAACGACAACATGGGCAACACCACCGGGGGCAGCAGCAGCAGCAGCACCGCCATCACCACCACCACCATCAGCCAGGACAAAAATGGCAAAAATGGCAAAAAGACCTACGAGCAGATGATGATCGAAGCAATCACCGAGAACGATCCGCACCGGAAGGGCATTTCGTTTGCGTTGATTAAAAAGTTTATCAAGGGCAAGTACCAAATCGAGACCGAGGTGGCTGCGGTGTACATGAAGCGAGCGTAC GAAAAGCTGACCACCAAGTCGATCGTTGAGCGGGTGTCGAGAAAGAGCGGTATCAATG GCAGCATCCGCCTCACCAAAGCGCACGTAGAGAAGGGAAGGAAGCAACAGAGCAAAGGGATCAAGCAGGCCGAGAAAGCAGCAAAGAAGGCGACAAAAACGAAACCGAAAGCGAAGAAGCAGGCGGATCCTAAACCGAAGCAGACCAAAAAGGATAAAAACAACAATGACGGCGAGAAGAAGCAGAAAAAGGAGAAGCCGGCCAAGGCAAAGCCCGCCCAGCCAGTCAAACTGAATCCGAAGAAAACCGCCATTACGAAGACGAAAATCGACCGTTCC GGGGGGAA GGTACGGCTTTCGATTGTGTCCTCCATGGATCCCGGGCCGAGCGGTA GGGCGAA CGAACATCTAAGGCAGCGAA ]
[-] EMBL CNS09K9L [ AGGAAGTGAAAGTGCTTGCCGTCAAACCGTTGAAGCCGGAAAAGGGCCAGCAATCGGAACCGGAGGAACAGATGGAAGAGATAACGAACGACAACATGGGCAACACCACCGGGGGCAGCAGCAGCAGCAGCACCGCCATCCCCCCCCCCCCCATCAGCCAGGACAAAAATGGCAAAAATGGCAAAAAGACCTACGAGCAGATGATGATCGAAGCAATCACCGAGAACGATCCGCCCCGGAAGGGCATTTCGTTTGCGTTGATTAAAAAGTTTATCAAGGGCAAGTACCAAATCGAGACCGAGGTGGCTGCGGTGTACATGAAGCGAGCGTACTGAAAAGCTGACCACCAAGTCGATCGTTGAGCGGGTGTCGAGAAAGAGCGGTGTCAATG GCAGCATCCGCCTCACCAAAGCGCACGTAGAGAAGGGAAGGAAGCAACAGAGCAAAGGGATCAAGCAGGCCGAGAAAGCAGCAAAGAAGGCGACAAAAACGAAACCGAAAGCGAAGAAGCAGGCGGATCCTAAACCGAAGCAGACCAAAAAGGATAAAAACAACAATGACGGCGAGAAGAAGCAGAAAAAGGAGAAGCCGGCCAAGGCAAAGCCCGCCCAGCCAGTCAAACTGAATCCGAAGAAAACCGCCATTACGAAGACGAAAATCGA CGTTCC GGGGGGAA GGTACGGCTTTCGATTGTGTCCTCCATGGATCCCGGGCCGAGCGGTA GGGCGAAGCCGACATCTAAGGCAGCGAAGGGGGGGAAGGCTGCTAAGACTAAGAGTGACGAAATGAACAAGAAACCAACGGCCGCCAAACCGCAACCTGTCAGGGCGGGCAGAGAGAAGAAGCAATAGAAGGAGGTTGGTTTTACGGTCGGATTATTTAATTTATTACGTATTTGTGTAATTTTACGATGTATGTGTGCCATTTTATGTGCGAATAAACTATGTAA ]
[-] EMBL CNS095AF [ GAAAGTGCTTGCCGTCAAACCGTTGAAGCCGGAAAAGGGCCAGCAATCGGAACCGGAGGAACAGATGGAAGAGATAACGAACGACAACATGGGCAACACCACCGGGGGCAGCAGCAGCAGCAGCACCGCCATCACCACCACCACCATCAGCCAGGACAAAAATGGCAAAAATGACAAAAAGACCTACGAGCAGATGATGATCGAAGCAATCACCGAGAACGATCCGCACCGGAAGGGCATTTCGTTTGCGTTGATTAAAAAGTTTATCAAGGGCAAGTACCAAATCGAGACCGAGGTGGCTGCGGTGTACATGAAGCGAGCGTAC GAAAAGCTGACCACCAAGTCGATCGTTGAGCGGGTGTCGGGAAAGAGCGGTATCAATG GCAGCATCCGCCTCACCAAAGCGCACGTAGAGAAGGGAAGGAAGCAACAGAGCAAAGGGATCAAGCAGGCCGAGAAAGCAGCAAAGAAGGCGACAAAAACGAAACCGAAAGCGAAGAAGCAGGCGGATCCTAAACCGAAGCAGACCAAAAAGGATAAAAACAACAATGACGGCGAGAAGAAGCAGAAAAAGGAGAAGCCGGCCAAGGCAAAGCCCGCCCAGCCAGTCAAACTGAATCCGAAGAAAACCGCCATTACGAAGACGAAAATCGACCGTTCC GGGGGGAA GGTACGGCTTTCGATTGTGTCCTCCATGGATCCCGGGCCGAGCGGTA GGGCGAAGCCGACATCTAAGGCAGCGAAGGGGGGGAAGGCTGCTAAGACTAAGAGTGACGAAATGAACAAGAAACCAACGGCCGCCAAACCGCAACCTGTCAGGGCGGGCAGAGAGAAGAAGCAATAGAAGGAGGTTGGTTTTACGGTCGGATTATTTAATTTATTACGTATTTGTGTAATTTTACGATGTATGTGTGCCATTTTATGTGCGAATAAACTATGTAAT ]
[+] EMBL BM598860 [ CCGGAAAAGGGCCATCAATCGGAACCGGAGGAACAGATGGAAGAGATAACGAACGACAACATGGGCAACACCACCGGGGGCAGCAGCAGCAGCAGCACCGCCATCACCACCACCACCACCAGCCAGGACAAAAATGGCAAAAATGGCAAAAAGACCTACGAGCAGATGATGATCGAAGCAATCACCGAGAACGATCCGCACCGGAAGGGCATTTCGTTTGCGTTGATTAAAAAGTTTATCAAGGGCAAGTACCAAATCGAGACCGAGGTGGCTGCGGTGTACATGAAGCGAGCGTAC GAAAAGCTGACCACCAAGTCGATCGTTGAGCGGGTGTCGGGAAAGAGCGGCACCAAAGCGCAcgtagac ]
[+] EMBL CNS09DJH [ GGCAAAAAGACCTACGAGCAGATGATGATCGAAGCAATCACCGAGAACGATCCGCACCGGAAGGGCATTTCGTTTGCGTTGATTAAAAAGTTTATCAAGGGCAAGTACCAAATCGAGACCGAGGTGGCTGCGGTGTACATGAGGCGAGCGTAC GAAAAGCTGACCACCAAGTCGATCGTTGAGCGGGTGTCGGGAAAGAGCGGTATCAATG GCAGCATCCGCCTCACCAAAGCGCACGTAGAGAAGGGAAGGAAGCAACAGAGCAAAGGGATCAAGCAGGCCGAGAAAGCAGCAAAGAAGGCGACAAAAACGAAACCGAAAGCGAAGAAGCAGGCGGATCCTAAACCGAAGCAGACCAAAAAGGATAAAAACAACAATGACGGCGAGAAGAAGCAGAAAAAGGAGAAGCCGGCCAAGGCAAAGCCCGCCCAGCCAGTCAAACTGAATCCGAAGAAAACCGCCATTACGAAGACGAAAA ]
[-] EMBL CNS09DJI [ GAAAAGCTGACCACCAAGTCGATCGTTGAGCGGGTGTCGGGAAAGAGCGGTATCAATG GCAGCATCCCCCTCACCAAAGCGCACGTAGAGAAGGGAAGGAAGCAACAGAGCAAAGGGATCAAGCAGGCCGAGAAAGCAGCAAAGAAGGCGACAAAAACGAAACCGAAAGCGAAGAAGCAGGCGGATCCTAAACCGAAGCAGACCAAAAAGGATAAAAACAACAATGACGGCGAGAAGAAGCAGAAAAAGGAGAAGCCGGCCAA GCAAAGCCCGCCCAGCCAGTCAAACTGAATCCGAAGAAAACCGCCATTACGAAGACGAAAATCGACCGTTCC GGGGGGAA GGTACGGCTTTCGATTGTGTCCTCCATGGATCCCGGGCCGAGCGGTAGGGGCGAAGCCGACATCTAAGGCAGCGAAGGGGGGGAAGGCTGCTAAGACTAAGAGTGACGAAATGAACAAGAAACCAACGGCCGCCAAACCGCAACCTGTCAGGGCGGGCAGAGAGAAGAAGCAATAGAAGGAGGTTGGTTTTACGGTCGGATTATTTAATTTATTACGTATTTGTGTAATTTTACGATGTATGTGTGCCATTTTATGTGCGAATAAACT ]
[-] EMBL CNS09073 [ GTTGAGCGGGTGTCGGGAAAGAGCGGCATCAATG GCAGCATCCGTCTCACCAAAGCGCACGTAGACAAGGGAGGGAAGCAACAGAGCAAAGGGATCAAGCAGGCCGAGAAAGCAGCAAAGAAGGCGGCAAAAACGAAACCGAAAGCGAAGAATCAGGCGGATCCTAAACCGAAGCAGACCAAAAAGGATAAAAACAACAATGACGGCGAGAAGAAGCAGAAAAAGGAGAAGCCGGCCAAGGCGAAGCCCGCGCAGCCTGTCAAACTGAATCCGAAGAAAACCGCCATTACGAAGACGAAAATCGA CGTTCC GGGGGGAA GGTACGGCTTTCGATTGTGTCCTCCACGGATCCGGGGCCGAGCGGTA GGGCGAAGCCGACATCTAAGGCAGCGAAGGGGGGGAAGGCTGCTAAGACTAAGAGTGACGAAATGAACAGGAAACCAACGGCCGCCAAACCGCAACCTGTCAGGGCGGGCAGAGAGAAGAAGCAATAGAAGGAGGTTGGTTTTACGCTCGGATTATTTAATTTATTACGTATTTGTGTGATTTTACGATGTATGCGTGCCATTTTATGTGCGAATAAACTATGTA ]
[-] EMBL CNS09GQ0 [ aaaaaccCCTCACCAAAGCGCACGTAGAGAAGGGAAGGAGGCAACAGAGCAAAGGGATCAAGCAGGCCGAGAAAGCAGCAAAGAAGGCGACAAAAACGAAACCGAAAGCGAAGAAGCAGGCGGATCCTAAACCGAAGCAGACCAAAAAGGATAAAAACAACAATGACGGCGAGAAGAAGCAGAAAAAGGAGAAGCCGGCCAA GCAAAGCCCGCCCAGCCAGTCAAACTGAATCCGAAGAAAACCGCCATTACGAAGACGAAAATCGACCGTTCC GGGGGGAA GGTACGGCTTTCGATTGTGTCCTCCATGGATCCCGGGCCGAGCGGTA GGCGAAGCCGACATCTAAGGCAGCGAAGGGGGGGAAGGCTGCTAAGACTAAGAGTGACGAAATGAACAAGAAACCAACGGCCCCCAAACCGCAACCTGTCAGGGCGGGCAGAGAGAAGAAGCAATAGAAGGAGGTTGGTTTTACGGTCGGATTATTTAATTTATTACGTATTTGTGTAATTTTACGATGTATGTGTGCCATTTTATGTGCGAATAAACTATGTAATTATTGTGGTTAAGAAAAAAAAAAA]
[-] EMBL CNS093RS [ TCAAGCAGGCCGAGAAAGCAGCAAAGAAGGCGGCAAAAACGAAACCGAAAGCGAAGAATCAGGCGGATCCTAAACCGAAGCAGACCAAAAAGGATAAAAACAACAATGACGGCGAGAAG ATCAGAAAAAGGAGAAGCCGGCCAAGGCGAAGCCCGCGCAGCCTGTCAAACTGAATCCGAAGAAAACCGCCATTACGAAGACGAAAATCGA CGTTCC GGGGGGAAGGGTACGGCCTTCGATTGTGTCCTCCACGGATCCGGGGCCGAGCGGTA GGGCGAAGCCGACATCTAAGGCAGCGAAGGGGGGGAAGGCTGCTAAGACTAAGAGTGACGAAATGAACAGGAAACCAACGGCCGCCAAACCGCAAC ]
[-] EMBL CNS0938E [ AAATCGACCGTTCC GGGGGGAA GGTACGGCTTTCGATTGTGTCCTCCATGGATCCCGGGCCGAGCGGTA GGGCGAAGCCGACATCTAAGGCAGCGAAGGGGGGGAAGGCTGCTAAGACTAAGAGTGACGAAATGAACAAGAAACCA ]
consensusID : consensus_9856#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 681 fasta sequence
[CCGCCCACGCGTCCGCCCACGCGTCCGGGCAAAGGAAGTGAAAGTGCTTGCCGTCAAACCGTTGAAGCCGGAAAAGGGCCAGCAATCGGAACCGGAGGAACAGATGGAAGAGATAACGAACGACAACATGGGCACCACCACCGGAGGCAGCAGCAGCAGCAGCACCGCCATCACCACCACCACCATCAGCCAGGACAAAAATGGCAAAAATGGCAAAAAGACCTACGAGCAGATGATGATCGAAGCAATCACCGAGAACGATCCGCACCGGAAGGGCATTTCGTTTGCGTTGATTAAAAAGTTTATCAAGGGCAAGTACCAAATCGAGACCGAGGTGGCTGCGGTGTACATGAAGCGAGCGTACGAAAAGCTGACCACCAAGTCGATCGTTGAGCGGGTGTCGGGAAAGAGCGGCATCAATGGCAGCATCCGTCTCACCAAAGCGCACGTAGACAAGGGAAGGAAGCAACAGAGCAAAGGGATCAAGCAGGCCGAGAAAGCAGC-AAAGAAGGCGGCAAAAACGAAACCGAAAGCGAAGAATCAGGCGGATCCTAAACCGAAGCAGACCAAAAAGGATAAAAACAACAATGACGGCGAGAAGAAGCAGAAAAAGGAGAAGCCGGCCAAGGCGAAGCCCG-CGCAGCCT-GTCAAACTGAATCCGAAAAAACCGCCATTACGAAG]
[+] EMBL BM586565 [CCGCCCACGCGTCCGCCCACGCGTCCGGGCAAAGGAAGTGAAAGTGCTTGCCGTCAAACCGTTGAAGCCGGAAAAGGGCCAGCAATCGGAACCGGAGGAACAGATGGAAGAGATAACGAACGACAACATGGGCACCACCACCGGAGGCAGCAGCAGCAGCAGCACCGCCATCACCACCACCACCATCAGCCAGGACAAAAATGGCAAAAATGGCAAAAAGACCTACGAGCAGATGATGATCGAAGCAATCACCGAGAACGATCCGCACCGGAAGGGCATTTCGTTTGCGTTGATTAAAAAGTTTATCAAGGGCAAGTACCAAATCGAGACCGAGGTGGCTGCGGTGTACATGAAGCGAGCGTACGAAAAGCTGACCACCAAGTCGATCGTTGAGCGGGTGTCGGGAAAGAGCGGCATCAATGGCAGCATCCGTCTCACCAAAGCGCACGTAGACAAGGGAAGGAAGCAACAGAGCAAAGGGATCAAGCAGGCCGAGAAAGCAGC AAAGAAGGCGGCAAAAACGAAACCGAAAGCGAAGAATCAGGCGGATCCTAAACCGAAGCAGACCAAAAAGGATAAAAACAACAATGACGGCGAGAAGAAGCAGAAAAAGGAGAAGCCGGCCAAGGCGAAGCCCG CGCAGCCT GTCAAACTGAATCCGAAAAAACCGCCATTACGAAG]
[+] EMBL BM603374 [ CCGGGCAAAGGAAGTGAAAGTGCTTGCCGTCAAACCGTTGAAGCCGGAAAAGGGCCAGCAATCGGAACCGGAGGAACAGATGGAAGAGATAACGAACGACAACATGGGCACCACCACCGGAGGCAGCAGCAGCAGCAGCACCGCCATCACCACCACCACCATCAGCCAGGACAAAAATGGCAAAAATGGCAAAAAGACCTACGAGCAGATGATGATCGAAGCAATCACCGAGAACGATCCGCACCGGAAGGGCATTTCGTTTGCGTTGATTAAAAAGTTTATCAAGGGCAAGTACCAAATCGAGACCGAGGTGGCTGCGGTGTACATGAAGCGAGCGTACGAAAAGCTGACCACCAAGTCGATCGTTGAGCGGGTGTCGGGAAAGAGCGGCATCAATGGCAGCATCCGTCTCACCAAAGCGCACGTAGACAAGGGAAGGAAGCAACAGAGCAAAGGGATCAAGCAGGCCGAGAAAGCAGC AAAGAAGGCGGCAAAAACGAAACCGAAAGCGAAGAATCAGGCGGATCCTAAACCGAAGCAGACCAAAAAGGATAAAAACAACAATGACGGCGAGAAGAAGCAGAAAAAGGAGAAGCCGGCCAAGGCGAAGCCCG CGCAGCCT GTCAAACTGA ]
[+] EMBL BM615917 [ CCGGGCAAAGGAAGTGAAAGTGCTTGCCGTCAAACCGTTGAAGCCGGAAAAGGGCCAGCAATCGGAACCGGAGGAACAGATGGAAGAGATAACGAACGACAACATGGGCACCACCACCGGAGGCAGCAGCAGCAGCAGCACCGCCATCACCACCACCACCATCAGCCAGGACAAAAATGGCAAAAATGGCAAAAAGACCTACGAGCAGATGATGATCGAAGCAATCACCGAGAACGATCCGCACCGGAAGGGCATTTCGTTTGCGTTGATTAAAAAGTTTATCAAGGGCAAGTACCAAATCGAGACCGAGGTGGCTGCGGTGTACATGAAGCGAGCGTACGAAAAGCTGACCACCAAGTCGATCGTTGAGCGGGTGTCGGGAAAGAGCGGCATCAATGGCAGCATCCGTCTCACCAAAGCGCACGTAGACAAGGGAAGGAAGCAACAGAGCAAAGGGATCAAGCAGGCCGAGAAAGCAGCGAAAGAAGGCGGCAAAAACGAAACCGAAAGCGAAG ]
[+] EMBL CNS09072 [ cgctatgatGGCAAAGGAAGTGAAAGTGCTTGCCGTCAAACCGTTGAAGCCGGAAAAGGGCCAGCAATCGGAACCGGA GAACAGATGGAAGAGATAACGAACGACAACATGGGCACCACCACCGGA GCAGCAGCAGCAGCAGCACCGCCATCACCACCACCACCATCAGCCAGGACAAAAATGGCAAAAATGGCAAAAAGACCTACGAGCAGATGATGATCGAAGCAATCACCGAGAACGATCCGCACCGGAAGGGCATTTCGTTTGCGTTGATTAAAAAGTTTATCAAGGGCAAGTACCAAATCGAGACCGAGGTGGCTGCGGTGTACATGAAGCGAGCGTACGAAAAGCTGACCACCAAGTCGATCGTTGAGCGGGTGTCGGGAAAGAGCGGCATCAATGGCAGCATCCGTCTCACCAAAGCGCACGTAGACAAGGGAGGGAAGCAACAGAGCAAAGGGATCAAGCAGGCCGAGAAAGCAGC AAAGAAGGCGGCAAAAACGAAACCGAAAGCGAAGAATCAGGCGGATCCTAAACCGAAGCAGACCAAAAAGGATAAAAACAACAATGACGGCGAGAAGAAGCAGAAAAAGGAGAAGCCGGCCAAGGCGAA CCCGCCGCAGCCTGGTCAAACTGAATCCGAAga ]
[+] EMBL CNS099RK [ GCAATCGGAACCGGA GAACAGAGGGAAGAGATAACGAACGAGAACATGGGCACCACCACCGGA GCAGCAGCAGCAGCAGCACCGCCATCACCACCACCACCATCAGCCAGGACAAAAAGGGCAAAAAGGGCAAAAAGACCTACGAGCAGA ]
[+] EMBL CNS093RR [ AGAACGATCCGCACCGGAAGGGCATTTCGTTTGCGTTGATTAAAAAGTTTATCAAGGGCAAGAAACAAATCGAGACCGAGGTGGCTGCGGTGTACATGAAGCGAGC ]
consensusID : consensus_9856#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 252 fasta sequence
[CAGAATCGCCACGAGGNTGAACAATCACCGAGAACGATCCGCACCGGAAGGGCGTTTCGTTTGCGTTGATTAAAAAGTTTATCAAGGGGCAAGTACCAAATCGAGACCGAGGTGGCTGCGGTGTACATGAAGCGAGCGTACGAAAAGCTGACCACCAAGTCGATCGTTGAGCGGGTGTCGGGAAAGACGCGGCATCAATGGCAGCATCCGCCTCACCAAAGCGCACGTAGACAACGGAAGGAAGCAACAGGA]
[+] EMBL BX469357 [CAGAATCGCCACGAGGNTGAACAATCACCGAGAACGATCCGCACCGGAAGGGCGTTTCGTTTGCGTTGATTAAAAAGTTTATCAAGGGGCAAGTACCAAATCGAGACCGAGGTGGCTGCGGTGTACATGAAGCGAGCGTACGAAAAGCTGACCACCAAGTCGATCGTTGAGCGGGTGTCGGGAAAGACGCGGCATCAATGGCAGCATCCGCCTCACCAAAGCGCACGTAGACAACGGAAGGAAGCAACAGGA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9856#0 GTCTTGCATTACCAACCGTTCAGTGAGCACTTGCCGCCCAAACTCGATGATACAGCCGAA 60
consensus_9856#1 ------------------------------------------------------------
consensus_9856#2 ------------------------------------------------------------
consensus_9856#0 ACGACTAACATTCAGCTCACCCGCTATGATGGCAAAGGAAGTGAAAGTGCTTGCCGTCAA 120
consensus_9856#1 CCGCCCACGCGTCCGCCCACGCGTCCG---GGCAAAGGAAGTGAAAGTGCTTGCCGTCAA 57
consensus_9856#2 ------------------------------------------------------------
consensus_9856#0 ACCGTTGAAGCCGGAAAAGGGCCAGCAATCGGAACCGGAGGAACAGATGGAAGAGATAAC 180
consensus_9856#1 ACCGTTGAAGCCGGAAAAGGGCCAGCAATCGGAACCGGAGGAACAGATGGAAGAGATAAC 117
consensus_9856#2 ------------------------------------------------------------
consensus_9856#0 GAACGACAACATGGGCAACACCACCGGGGGCAGCAGCAGCAGCAGCACCGCCATCACCAC 240
consensus_9856#1 GAACGACAACATGGGCACCACCACCGGAGGCAGCAGCAGCAGCAGCACCGCCATCACCAC 177
consensus_9856#2 ------------------------------------------------------------
consensus_9856#0 CACCACCATCAGCCAGGACAAAAATGGCAAAAATGGCAAAAAGACCTACGAGCAGATGAT 300
consensus_9856#1 CACCACCATCAGCCAGGACAAAAATGGCAAAAATGGCAAAAAGACCTACGAGCAGATGAT 237
consensus_9856#2 ----------------------------------------------CAGAATCGCCACGA 14
* * *
consensus_9856#0 GATCGAAGCAATCACCGAGAACGATCCGCACCGGAAGGGCATTTCGTTTGCGTTGATTAA 360
consensus_9856#1 GATCGAAGCAATCACCGAGAACGATCCGCACCGGAAGGGCATTTCGTTTGCGTTGATTAA 297
consensus_9856#2 GGNTGAA-CAATCACCGAGAACGATCCGCACCGGAAGGGCGTTTCGTTTGCGTTGATTAA 73
* *** ******************************** *******************
consensus_9856#0 AAAGTTTATCAAGGG-CAAGTACCAAATCGAGACCGAGGTGGCTGCGGTGTACATGAAGC 419
consensus_9856#1 AAAGTTTATCAAGGG-CAAGTACCAAATCGAGACCGAGGTGGCTGCGGTGTACATGAAGC 356
consensus_9856#2 AAAGTTTATCAAGGGGCAAGTACCAAATCGAGACCGAGGTGGCTGCGGTGTACATGAAGC 133
*************** ********************************************
consensus_9856#0 GAGCGTACGAAAAGCTGACCACCAAGTCGATCGTTGAGCGGGTGTCGGGAAAGA-GCGGT 478
consensus_9856#1 GAGCGTACGAAAAGCTGACCACCAAGTCGATCGTTGAGCGGGTGTCGGGAAAGA-GCGGC 415
consensus_9856#2 GAGCGTACGAAAAGCTGACCACCAAGTCGATCGTTGAGCGGGTGTCGGGAAAGACGCGGC 193
****************************************************** ****
consensus_9856#0 ATCAATGGCAGCATCCGCCTCACCAAAGCGCACGTAGAGAAGGGAAGGAAGCAACAGAGC 538
consensus_9856#1 ATCAATGGCAGCATCCGTCTCACCAAAGCGCACGTAGACAAGGGAAGGAAGCAACAGAGC 475
consensus_9856#2 ATCAATGGCAGCATCCGCCTCACCAAAGCGCACGTAGACAACGGAAGGAAGCAACAGGA- 252
***************** ******************** ** ***************
consensus_9856#0 AAAGGGATCAAGCAGGCCGAGAAAGCAGCAAAGAAGGCGACAAAAACGAAACCGAAAGCG 598
consensus_9856#1 AAAGGGATCAAGCAGGCCGAGAAAGCAGCAAAGAAGGCGGCAAAAACGAAACCGAAAGCG 535
consensus_9856#2 ------------------------------------------------------------
consensus_9856#0 AAGAAGCAGGCGGATCCTAAACCGAAGCAGACCAAAAAGGATAAAAACAACAATGACGGC 658
consensus_9856#1 AAGAATCAGGCGGATCCTAAACCGAAGCAGACCAAAAAGGATAAAAACAACAATGACGGC 595
consensus_9856#2 ------------------------------------------------------------
consensus_9856#0 GAGAAGAAGCAGAAAAAGGAGAAGCCGGCCAAGGCAAAGCCCGCCCAGCCAGTCAAACTG 718
consensus_9856#1 GAGAAGAAGCAGAAAAAGGAGAAGCCGGCCAAGGCGAAGCCCGCGCAGCCTGTCAAACTG 655
consensus_9856#2 ------------------------------------------------------------
consensus_9856#0 AATCCGAAGAAAACCGCCATTACGAAGACGAAAATCGACCGTTCCGGGGGGAAGGTACGG 778
consensus_9856#1 AATCCGAA-AAAACCGCCATTACGAAG--------------------------------- 681
consensus_9856#2 ------------------------------------------------------------
consensus_9856#0 CTTTCGATTGTGTCCTCCATGGATCCCGGGCCGAGCGGTAGGGCGAAGCCGACATCTAAG 838
consensus_9856#1 ------------------------------------------------------------
consensus_9856#2 ------------------------------------------------------------
consensus_9856#0 GCAGCGAAGGGGGGGAAGGCTGCTAAGACTAAGAGTGACGAAATGAACAAGAAACCAACG 898
consensus_9856#1 ------------------------------------------------------------
consensus_9856#2 ------------------------------------------------------------
consensus_9856#0 GCCGCCAAACCGCAACCTGTCAGGGCGGGCAGAGAGAAGAAGCAATAGAAGGAGGTTGGT 958
consensus_9856#1 ------------------------------------------------------------
consensus_9856#2 ------------------------------------------------------------
consensus_9856#0 TTTACGGTCGGATTATTTAATTTATTACGTATTTGTGTAATTTTACGATGTATGTGTGCC 1018
consensus_9856#1 ------------------------------------------------------------
consensus_9856#2 ------------------------------------------------------------
consensus_9856#0 ATTTTATGTGCGAATAAACTATGTAATTATTGTGGTTAAGAAAAAAAAAAA 1069
consensus_9856#1 ---------------------------------------------------
consensus_9856#2 ---------------------------------------------------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||