These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9860#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 18 consensus length = 1377 fasta sequence [GTTATGCAAACGGTATATTTTATTTCTTTCT-GTAAGGCTTGCGAA-GCAATCGTTGAATTCCACACACACGAGACTTAAATGAAAGATGAACTTTGGAATGGAATAAAGACACGTGAGCACAAAA-CAAACATCT-GGATCGTAGATGAAGGAAGATGGCAC-TGACAAAAACT-GCTGCTGCTATTAAGATGGCAATTTAAAACATTCAGTGCAACCGTTTGACTAGGGCAGTTACGACGGCCAGAGCCGCGATGGCGAACATCGAAAAGTCACCGCGTGAGGCACCACTCTGGCAGACCTTGCGCACCGAAGTTGTCGACAGAC-CGCGACGCCGCAACAGATTGCGGATGCTTTGAATATCCTCCGGTCCCAAGCTCATCGGCACACGCGACAGCACGATCGTGAACAGCTGACCCCCCGGCAGACTCTGGCAGAAGTTGAGCACGAGCTGATTGTTGACCGCCTTCAGCACCTGCACCGTGCCGGTAAACTGAACGTACTGCAGCTGTATCATCGAGCCGGACTGCGGAGAGGCCGAGATCCAGAACCCGGGCATCGATGTGTTGTAACGCAGCGTGTACTCCAGCGTGTGCTCCGACTCGTCCCAAATCAGGCGTAGGTTGCGCATCGTGCGCGGTTCATGCTGCAAATACTGATGGTTGCCCTGCTGACGGCGTTGCTGGTTTTGCTGCTCGTACGAGCTGCTCGGGCTCCGACCGCCGCTCGTACCGTAGCCGTACGAGGTCGCAAAACGGTCATAGTTCGTACCGGACGGGTTAGTGCGGCCACCGTATCCCGTCGATTGATCGTATACGGAGGTTGTCGCG-TTCGTCAC-GTCTG-CCAGGTGGATTACAACGCAGGTTTTGTAGACCGATTCGCCCTCCTCGCGACTGTCGTGCGTGATCACTTCGCTCCCATACCAGATGCCCATAATCTGGTCAATGTCGAGGCCATGCTGGGGATTGAAATCCGTACAGTGCTGCGAGGGAGCAGTGCCACGGTTTTCTGCCGAGCTGGATCCGTACCCTTGCGGGACACTTCCGGCAGACGCGTGCTCCAGCACAAAACCACAAAAGACGGCCAACAGCGAATGGAGGATCATT----TTGCTGTGCACTTTCGTCACTTGTTGTTGTTTAATTTATTCTCG--TTTTAGTCGATACACTTATTCGTTGCTTATTCCTACGCG-AACGTTCACAATCTGATCACGGGGAAGGCCTTGAAACTGTTAATCACTTTGCTCGCTACTACTTCCCAACATAACGCAGCTTAACCCACACACTTCTCTATGGTTGGCAGAAGCTTCAACACATCAACGATCGAAACACAAGCGAGAACCGAAACCGAACC-GACGCCGCAAGAGGTGACCGGACGCGTGGGCGG] [+] EMBL CNS093T4 [GTTATGCAAACGGTATATTTTATTTCTTTCT GTAAGGCTTGCGAA GCAATCGTTGAATTCCACACACACGAAACTTAAATGAAAGATGAACTTTGGAATGGAATAAAGACACGTGAGCACAAAA CAAACATCT GGGTCGTAGATGAAGGAAGATGACAC TGACAAAAACT GCTGCTGCTATTAAGATGGCAATTTAAAACATTCAGTGCAACCGTTTGACTAGGGCAGTTACGACGGCCAGAGCCGCGATGGCGAACATCGAAAAGTCACCGCGTGAGGCACCACTCTGGCAGACCTTGCGCACCGAAGTTGTCGACAGAC CGCGACGCCGCAACAGATTGCGGATGCTTTGAATATCCTCCGGTCCCAAGCTCATCGGCACACGCGACA CACGATCGTGAACAGCTGACCCCCCGGCAGACTCTGGCAGAAGTTGAGCACGAGCTGATTGTTGACCGCCTTCAGCACCTGCACCGTGCCGGTAAACTGAACGTACTGCAGCTGTATCATCGAGCCGGACTGCGGAGAGGCCGAGATCCAAAACCCGGGCATCGATGTTTTGTAACGCAGCGTGTACTCCAGCGTGTGCTCCGACTCGTCCCAAATCAGGCGTAGGTTGCGCATCGTGCGCGGTTCATGCTGCAAATACTGATGGTTGCCCTGCTGACGGCGTTGCTGGTTTTGCTGCTCGTACGAACTGCTCGGGCTCCGACCGCCGCTCGTACCGTAGCCGTACGAGGTCGCAAAACGGTCATAGTTCGTACCGGACGGGTTAGTGCGGCCACCGTATCCCGTCGATTGATCGTATACGGAGGTTGT ] [+] EMBL CNS09JJF [ GCAAACGGTATATTTTATTTCTTTCTCGTAAGGCTTGCGAAGGCAATCGTTGAATTCCACACACACGAGACTTAAATGAAAGATGAACTTTGGAATGGAATAAAGACACGTGAGCACAAAA CAAACATCTCGGATCGTAGATGAAGGAAGATGGCACTTGACAAAAACTCGCTGCTGCTATTAAGATGGCAATTTAAAACATTCAGTGCAACCGTTTGACTAGGGCAGTTACGACGGCCAGAGCCGCGATGGCGAACATCGAAAAGTCACCGCGTGAGGCACCACTCTGGCAGACCTTGCGCACCGAAGTTGTCGACAGACACGCGACGCCGCAACAGATTGCGGATGCTTTGAATATCCTCCGGTTCCAAGCTCATCGG ] [+] EMBL CNS095DV [ GGTATATTTTATTTCTTTCT GTAAGGCTTGCGAAGGCAATCGTTGAATTCCACACACACGAGACTTAAATGAAAGATGAACTTTGGAATGGAATAAAGACACGTGAGCACAAAA CAAACATCT GGGTCGTAGATGAAGGAAGATGGCAC TGACAAAAACT GCTGCTGCTATTAAGATGGCAATTTAAA ] [-] EMBL BX608970 [ TGGAATAAAGACACGTGAGCACAAAA CAAACATCT GGATCGTAGATGAAGGAAGATGGCAC TGACAAAAACT GCTGCTGCTATTAAGATGGCAATTTAAAACATTCAGTGCAACCGTTTGACTAGGGCAGTTACGACGGCCAGAGCCGCGATGGCGAACATCGAAAAGTCACCGCGTGAGGCACCACTCTGGCAGACCTTGCGCACCGAAGTTGTCGACAGAC CGCGACGCCGCAACAGATTGCGGATGCTTTGAATATCCTCCGGTCCCAAGCTCATCGGCACACGCGACAGCACGATCGTGAACAGCTGACCCCCCGGCAGACTCTGGCAGAAGTTGAGCACGAGCTGATTGTTGACCGCCTTCAGCACCTGCACCGTGCCGGTAAACTGAACGTACTGCAGCTGTATCATCGAGCCGGACTGCGGAGAGGCCGAGATCCAGAACCCGGGCATCGATGTGTTGTAACGCAGCGTGTACTCCAGCGTGTGCTCCGACTCGTCCCAAATCAGGCGTAGGTTGCGCATCGTGCGCGGTTCATGCTGCAAATACTGATGGTTGCCCTGCTGACGGCGTTGCTGGTTTTGCTGCTCGTACGAGCTGCTCGGGCTCCGACCGCCGCTCGTACCGTAGCCGTACGAGGTCGCAAAAAGGTCATAGTTCGTACCGGACGGGTTAATGCGGCCACCGTATCCCGTCGATTGAT ] [-] EMBL BX617886 [ AAGACACGTGAGCACAAAACCAAACATCT GGATCGTAGATGAGGAAAGATGGCAC TGACAAAAACT GCTGCTGCTATTAAGATGGCAATTTAAAACATTCAGTGCAACCGTTTGACTAGGGCAGTTACGACGGCCAGAGCCGCGATGGCGAACATCGAAAAGTCACCGCGTGAGGCACCACTCTGGCAGACCTTGCGCACCGAAGTTGTCGACAGAC CGCGACGCCGCAACAGATTGCGGATGCTTTGAATATCCTCCGGTCCCAAGCTCATCGGCACACGCGACAGCACGATCGTGAACAGCTGACCCCCCGGCAGACTCTGGCAGAAGTTGAGCACGAGCTGATTGTTGACCGCCTTCAGCACCTGCACCGTGCCGGTAAACTGAACGTACTGCAGCTGTATCATCGAGCCGGACTGCGGAGAGGCCGAGATCCAGAACCCGGGCATCGATGTGTTGTAACGCAGCGTGTACTCCAGCGTGTGCTCCGACTCGTCCCAAATCAGGCGTAGGTTGCGCATCGTGCGCGGTTCATGCTGCAAATACTGATGGTTGCCCTGCTGACGGCGTTGCTGGTTTTGCTGCTCGTACGAGCTGCTCGGGCTCCGACCGCCGCTCGTACCGTAGCCGTACGAGGTCGCAAAACGGTCATAGTTCGTACCGGACGGGTTAGTGCGGCCACCGTATCCCGTCGATTGATCGTATACGGAGGTTGTCGCG TTCGTCAC GTCTG CCAGGTGGATTACAACGCAG ] [-] EMBL BX613486 [ GACAAAAACT GCTGCTGCTATTAAGATGGCAATTTAAAACATTCAGTGCAACCGTTTGACTAGGGCAGTTACGACGGCCAGAGCCGCGATGGCGAACATCGAAAAGTCACCGCGTGAGGCACCACTCTGGCAGACCTTGCGCACCGAAGTTGTCGACAGAC CGCGACGCCGCAACAGATTGCGGATGCTTTGAATATCCTCCGGTCCCAAGCTCATCGGCACACGCGACAGCACGATCGTGAACAGCTGACCCCCCGGCAGACTCTGGCAGAAGTTGAGCACGAGCTGATTGTTGACCGCCTTCAGCACCTGCACCGTGCCGGTAAACTGAACGTACTGCAGCTGTATCATCGAGCCGGACTGCGGAGAGGCCGAGATCCAGAACCCGGGCATCGATGTGTTGTAACGCAGCGTGTACTCCAGCGTGTGCTCCGACTCGTCCCAAATCAGGCGTAGGTTGCGCATCGTGCGCGGTTCATGCTGCAAATACTGATGGTTGCCCTGCTGACGGCGTTGCTGGTTTTGCTGCTCGTACGAGCTGCTCGGGCTCCGACCGCCGCTCGTACCGTAGCCGTACGAGGTCGCAAAACGGTCATAGTTCGTACCGGACGGGTTAGTGCGGCCACCGTATCCCGTCGATTGATCGTATACGGAGGTTGTCGCG TTCGTCAC GTCTG CCAGGTGGATTACAACGCAGGTTTTGTAGACCGATTCGCCCTCCTCGCGACTGTCGTGCGTAAACACTTCGCTCCCATACCAGATGCCCA ] [-] EMBL BX613084 [ AACT GCTGCTGCTATTAAGATGGCAATTTAAAACATTCAGTGCAACCGTTTGACTAGGGCAGTTACGACGGCCAGAGCCGCGATGGCGAACATCGAAAAGTCACCGCGTGAGGCACCACTCTGGCAGACCTTGCGCACCGAAGTTGTCGACAGAC CGCGACGCCGCAACAGATTGCGGATGCTTTGAATATCCTCCGGTCCCAAGCTCATCGGCACACGCGACAGCACGATCGTGAACAGCTGACCCCCCGGCAGACTCTGGCAGAAGTTGAGCACGAGCTGATTGTTGACCGCCTTCAGCACCTGCACCGTGCCGGTAAACTGAACGTACTGCAGCTGTATCATCGAGCCGGACTGCGGAGAGGCCGAGATCCAGAACCCGGGCATCGATGTGTTGTAACGCAGCGTGTACTCCAGCGTGTGCTCCGACTCGTCCCAAATCAGGCGTAGGTTGCGCATCGTGCGCGGTTCATGCTGCAAATACTGATGGTTGCCCTGCTGACGGCGTTGCTGGTTTTGCTGCTCGTACGAGCTGCTCGGGCTCCGACCGCCGCTCGTACCGTAGCCGTACGAGGTCGCAAAACGGTCATAGTTCGTACCGGACGGGTTAGTGCGGCCACCGTATCCCGTCGATTGATCGTATACGGAGGTTGTCGCG TTCGTCAC GTCTG CCAG ] [-] EMBL BX622068 [ AGGCGTAGGTTGNGCATCGTGCGCGGTTCATGCTGCAAATACTGATGGTTGCCCTGCTGACGGCGCTGCTGGTTTNGCTGCTCGTACGAGCTGCTNGGGCTCCGAACGCCGCTCGTACCGTAGCCGTACGAGGTCGCAAAACGGTCATAGTTNGTACCGGACGGGTTAGTGCGGCCACCGTATCCCGTGGATTGATCGTATACGGAGGTTGTCGCG TTCGTCAC GTCTG CCAGGTGGATTACAACGCAGGTTTTGTAGACCGATTCGCCCTCCTCGNGACTGTCGTGCGTGATCACTTCGCTCCCATACCAGATGCCCATAATCTGGTCAATGTCGAGGCCATGCTGGGGATTGAAATCCGTACAGTGCTGCGAGGGAGCAGTGCCACGGTTTTCTGCCGAGCTGGATCCGTACCCTTGCGGGACACTTCCGGCAGACGCGTGCTCCAGCACAAAACCACAAAAGACAGCCAACAGCGAATGGAGGATCATTTTTGTTGCTGTGCACTTTCGTCACTTGTTGTTGTTTAATTTATACTCGT TTTTTTTCGATACACTTATTCGTTGCTTATTGCTACGCG AACGTTCACAATCTGATCACGGGGAAGGCCTTGAAACTGNTAATCACTTTGCTCGNTACTACTTCCCAACATAACGCAGCTTAACCCACACACTTCTCTATGGTTGGCAGAAGCTTCAACACATCAACGATCGAAACACAAGCGAGAACCGAAACCGAACC GACGCCGC ] [-] EMBL BX622391 [ AGGCGTAGGTTGCGCATCGTGCGCGGTTCATGCTGCAAATACTGATGGTTGCCCTGCTGACGGCGTTGCTGGTTTTGCTGCTCGTACGAGCTGCTCGGGCTCCGACCGCCGCTCGTACCGTAGCCGTACGAGGTCGCAAAACGGTCATAGTTCGTACCGGACGGGTTAGTGCGGCCACCGTATCCCGTCGATTGATCGTATACGGAGGTTGTCGCG TTCGTCAC GTCTG CCAGGTGGATTACAACGCAGGTTTTGTAGACCGATTCGCCCTCCTCGCGACTGTCGTGCGTGATCACTTCGCTCCCATACCAGATGCCCATAATCTGGTCAATGTCGAGGCCATGCTGGGGATTGAAATCCGTACAGTGCTGCGAGGGAGCAGTGCCACGGTTTTCTGCCGAGCTGGATCCGTACCCTTGCGGGACACTTCCGGCAGACGCGTGCTCCAGCACAAACCCACAAAAGACGGCCAACAGCGAATGGAGGATCATT TTGCTGTGCACTTTCGTCACTTGTTGTTGTTTAATTTATTCTCG TTTTAGTCGATACACTTATTCGTTGCTTATTCCTACGCG AACGTTCACAATCTGATCACGGGGAAGGCCTTGAAACTGTTAATCACTTTGCTCGCTACTACTTCCCAACATAACGCAGCTTAACCC ] [-] EMBL BM622267 [ GATGGTTGCCCTGCTGACGGCGTTGCTGGTTTTGCTGCTCGTACGAGCTGCTCGGGCTCCGACCGCCGCTCGTACCGTAGCCGTACGAGGTCGCAAAACGGTCATAGTTCGTACCGGACGGGTTAGTGCGGCCACCGTATCCCGTCGATTGATCGTATACGGAGGTTGTCGCG TTCGTCAC GTCTG CCAGGTGGATTACAACGCAGGTTTTGTAGACCGATTCGCCCTCCTCGCGACTGTCGTGCGTGATCACTTCGCTCCCATACCAGATGCCCATAATCTGGTCAATGTCGAGGCCATGCTGGGGATTGAAATCCGTACAGTGCTGCGAGGGAGCAGTGCCACGGTTTTCTGCCGAGCTGGATCCGTACCCTTGCGGGACACTTCCGGCAGACGCGTGCTCCAGCACAAACCCACAAAAGACGGCCAACAGCGAATGGAGGATCATT TTGCTGTGCACTTTCGTCACTTGTTGTTGTTTAATTTATTCTCG TTTTAGTCGATACACTTATTCGTTGCTTATTCCTACGCG AACGTTCACAATCTGATCACGGGGAAGGCCTTGAAACTGTTAATCACTTTGCTCGCTACTACTTCCCAACATAACGCAGCTTAACCCACACACTTCACTATGGTTGGCAGAAGCTTCAACACATCAACGATCGAAACACAAGCGAGAACCGAAACCGAACC GACGCCGCAAGCGG ] [-] EMBL BM582222 [ GTTTTGCTGCTCGTACGAGCTGCTCGGGCTCCGACCGCCGCTCGTACCGTAGCCGTACGAGGTCGCAAAACGGTCATAGTTCGTACCGGACGGGTTAGTGCGGCCACCGTATCCCGTCGATTGATCGTATACGGAGGTTGTCGCG TTCGTCAC GTCTG CCAGGTGGATTACAACGCAGGTTTTGTAGACCGATTCGCCCTCCTCGCGACTGTCGTGCGTGATCACTTCGCTCCCATACCAGATGCCCATAATCTGGTCAATGTCGAGGCCATGCTGGGGATTGAAATCCGTACAGTGCTGCGAGGGAGCAGTGCCACGGTTTTCTGCCGAGCTGGATCCGTACCCTTGCGGGACACTTCCGGCAGACGCGTGCTCCAGCACAAACCCACAAAAGACGGCCAACAGCGAATGGAGGATCATT TTGCTGTGCACTTTCGTCACTTGTTGTTGTTTAATTTATTCTCG TTTTAGTCGATACACTTATTCGTTGCTTATTCCTACGCG AACGTTCACAATCTGATCACGGGGAAGGCCTTGAAACTGTTAATCACTTTGCTCGCTACTACTTCCCAACATAACGCAGCTTAACCCACACACTTCACTATGGTTGGCAGAAGCTTCAACACATCAACGATCGAAACACAAGCGAGAACCGAAACCGAACCGGACGCgtgggcgg ] [-] EMBL BM589296 [ TTTTGCTGCTCGTACGAGCTGCTCGGGCTCCGACCGCCGCTCGTACCGTAGCCGTACGAGGTCGCAAAACGGTCATAGTTCGTACCGGACGGGTTAGTGCGGCCACCGTATCCCGTCGATTGATCGTATACGGAGGTTGTCGCG TTCGTCAC GTCTG CCAGGTGGATTACAACGCAGGTTTTGTAGACCGATTCGCCCTCCTCGCGACTGTCGTGCGTGATCACTTCGCTCCCATACCAGATGCCCATAATCTGGTCAATGTCGAGGCCATGCTGGGGATTGAAATCCGTACAGTGCTGCGAGGGAGCAGTGCCACGGTTTTCTGCCGAGCTGGATCCGTACCCTTGCGGGACACTTCCGGCAGACGCGTGCTCCAGCACAAAACCACAAAAGACGGCCAACAGCGAATGGAGGATCATTTTTGTTGCTGTGCACTTTCGTCACTTGTTGTTGTTTAATTTACACTCGTTTTTTTTTCGATACACTTATTCGTTGCTTATTCCTACGCG AACGTTCACAATCTGATCACGGGGAAGGCCTTGAAACTGTTAATCACTTTGCTCGCAACTACTTCCCAACATAACGCAGCTTAACCCACACACTTCTCTATGGTTGGCAGAAGCTTCAACACATCAACGATCGAAACACAAGCGAGAACCGAAACCGAACC GACcgg ] [-] EMBL BM628549 [ GCTCGGGCTCCGACCGCCGCTCGTACCGTAGCCGTACGAGGTCGCAAAACGGTCATAGTTCGTACCGGACGGGTTAGTGCGGCCACCGTATCCCGTCGATTGATCGTATAC GGTTGTCGCG TTCGTCAC GTCTG CCAGGTGGATTACAACGCAGGTTTTGTAGACCGATTCGCCCTCCTCGCGACTGTCGTGCGTGATCACTTCGCTCCCATACCAGATGCCCATAATCTGGTCAATGTCGAGGCCATGCTGGGGATTGAAATCCGTACAGTGCTGCGAGGGAGCAGTGCCACGGTTTTCTGACGAGCTGGATCCGTACCCTTGCGGAACACTTCCGGCAGACGCGTACTCCAGCACAAAACCACAAAAGACGGCCAACAGCGAATGGAGGATCATT TTGCTGTGCACTTTCGTCACTTGTTGTTGTTTAATTTATTCTCG TTTTAGTCGATACACTTATTCGTTGCTTATTCCTACGCG AACGTTCACAATCTGATCACGGGGAAGGCCTTGAAACTGTTAATCACTTTGCTCGCTACTACTTCCCAACATAACGCAGCCT ACACTTCTCTATGGTTGGCAGAAGCTTCAACACATCAACGATCGAAATACAAGCGAGAACCGAAACCGAACC GACGCCGCAAGAGATGACCGGACGCGTGGGCGG] [-] EMBL BX621777 [ CTCGGGCTCCGACCGCCGCTCGTACCGTAGCCGTACGAGGTCGCAAAACGGTCATAGTTCGTACCGGACGGGTTAGTGCGGCCACCGTATCCCGTCGATTGATCGTATACGGAGGTTGTCGCG TTCGTCAC GTCTG CCAGGTGGATTACAACGCAGGTTTTGTAGACCGATTCGCCCTCCTCGCGACTGTCGTGCGTGATCACTTCGCTCCCATACCAGATGCCCATAATCTGGTCAATGTCGAGGCCATGCTGGGGATTGAAATCCGTACAGTGCTGCGAGGGAGCAGTGCCACGGTTTTCTGCCGAGCTGGATCCGTACCCTTGCGGGACACTTCCGGCAGACGCGTGCTCCAGCACAAACCCACAAAAGACGGCCAACAGCGAATGGAGGATCATT TTGCTGTGCACTTTCGTCACTTGTTGTTGTTTAATTTATTCTCG TTTTAGTCGATACACTTATTCGTTGCTTATTCCTACGCG AACGTTCACAATCTGATCACGGGGAAGGCCTTGAAACTGTTAATCACTTTGCTCGCTACTACTTCCCAACATAACGCAGCTTAACCCACACACTTCACTATGGTTGGCAGAAGCTTCAACACATCAACGATCGAAAC ] [-] EMBL BX628618 [ CTCGTACCGTAGCCGTACGAGGTCGCAAAACGGTCATAGTTCGTACCGGACGGGTTAGTGCGGCCACCGTATCCCGTGGATTGATCGTATACGGAGGTTGTCGCG TTCGTCAC GTCTG CCAGGTGGATTACAACGCAGGTTTTGTAGACCGATTCGCCCTCCTCGCGACTGTCGTGCGTGATCACTTCGCTCCCATACCAGATGCCCATAATCTGGTCAATGTCGAGGCCATGCTGGGGATTGAAATCCGTACAGTGCTGCGAGGGAGCAGTGCCACGGTTTTCTGCCGAGCTGGATCCGTACCCTTGCGGGACACTTCCGGCAGACGCGTGCTCCAGCACAAAACCACAAAAGACAGCCAACAGCGAATGGAGGATCATTTTTGTTGCTGTGCACTTTCGTCACTTGTTGTTGTTTAATTTATACTCGT TTTTTTTCGATACACTTATTCGTTGCTTATTGCTACGCG AACGTTCACAATCTGATCACGGGGAAGGCCTTGAAACTGTTAATCACTTTGCTCGCTACTACTTCCCAACATAACGCAGCTTAACCCACACACTTCTCTATGGTTGGCAGAAGCTTCAACACATCAACGATCGAAACACAAGC ] [-] EMBL BM624433 [ CGGACGGGTTAGTGCGGCCACCGTATCCCGTCGATTGATCGTATACGGAGGTTGTCGCG TTCGTCAC GTCTG CCAGGTGGATTACAACGCAGGTTTTGTAGACCGATTCGCCCTCCTCGCGACTGTCGTGCGTGATCACTTCGCTCCCATACCAGATGCCCATAATCTGGTCAATGTCGAGGCCATGCTGGGGATTGAAATCCGTACAGTGCTGCGAGGGAGCAGTGCCACGGTTTTCTGCCGAGCTGGATCCGTACCCTTGCGGGACACTTCCGGCAGACGCGTGCTCCAGCACAAAACCACAAAAGACGGCCAACAGCGAATGGAGGATCATTTTTGTTGCTGTGCACTTTCGTCACTTGTTGTTGTTTAATTTACACTCGTTTTTTTTTCGATACACTTATTCGTTGCTTATTCCTACGCG AACGTTCACAATCTGATCACGGGGAAGGCCTTGAAACTGTTAATCACTTTGCTCGCAACTACTTCCCAACATAACGCAGCTTAACCCACACACTTCTCTATGGTTGGCAGAAGCTTCAACACATCAACGATCGAAACACAAGCGAGAACCGAAACCGAACC GACGCCGCAAGAGcgg ] [-] EMBL BX619392 [ GAGGTTGTCGCGTTTCGTCACGGTCTGCCCAGGTGGATTACAACGCAGGTTTTGTAGACCGATTCGCCCTCCTCGCGACTGTCGTGCGTGATCACTTCGCTCCCATACCAGATGCCCATAATCTGGTCAATGTCGAGGCCATGCTGGGGATTGAAATCCGTACAGTGCTGCGAGGGAGCAGTGCCACGGTTTTCTGCCGAGCTGGATCCGTACCCTTGCGGGACACTTCCGGCAGACGCGTGCTCCAGCACAAAACCACAAAAGACAGCCAACAGCGAATGGAGGATCATTTTTGTTGCTGTGCACTTTCGTCACTTGTTGTTGTTTAATTTATACTCGT TTTTTTTCGATACACTTATTCGTTGCTTATTGCTACGCGAAACGTTCACAATCTGATCACGGGGAAGGCCTTGAAACTGTTAATCACTTTGCTCGCTACTACTTCCCAACATAACGCAGCTTAACCCACACACTTCTCTATGGTTGGCAGAAGCTTCAACACATCAACGATCGAAACACAAGCGAGAACCG ANCCGAcctcgtg ] [-] EMBL BX603841 [ ATCCGTACAGTGTTGCGAGGGAGCAGTGCCACGGTTTTCTGCCGAGCTGGATCCGTACCCTTGCGGGACACTTCCGGCAGACGCGTGCTCCAGCACAAACCCACAAAAGACGGCCAACAGCGAATGGAGGATCATT TTGCTGTGCACTTTCGTCACTTGTTGTTGTTTAATTTATTCTCG TTTTAGTCGATACACTTATTCGTTGCTTATTCCTACGCG AACGTTCACAATCTGATCACGGGGAAGGCCTTGAAACTGTTAATCACTTTGCTCGCTACTACTTCCCAACATAACGCAGCTTAACCCACACACTTCACTATGGTTGGCAGAAGCTTCAACACATCAACGATCGAAACACAAGC ] consensusID : consensus_9860#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 749 fasta sequence [CAGACCGCGACGCCGCAACAGATTGCGGATGCTTGAATATCCTCC-GTCCCAAGCTCATCGGCACACGCGACAGCACGATCGTGAACAGCTGACCCCCCGGCAGACTCTGGCAGAAGTTGAGCACGAGCTGATTGTTGACCGCCTTCAGCACCTGCCACGTGCCGGTAAACTGAACGTACTGCAGCTGTATCATCGAGCCGGACTGCGGAGAGGCCGAGATCCAGAACCCGGGCATCGATGTGTTGTAACGCAGCGTGTACTCCAGCGTGTGCTCCGACTCGTCCCAAATCAGGCGTAGGTTGCGCATCGTGCGCGGTTCATGCTGCAAATACTGATGGTTGCCCTGCTGACGGCGTTGCTGGTTTTGCTGCTCGTACGAGCTGCTCGGGCTCCGACCGCCGCTCGTACCGTAGCCGTACGAGGTCGCAAAACGGTCATAGTTCGTACCGGACGGGTTAGTGCGGCCACCGTATCCCGTCGATTGATCGTATACGGAGGTTGTCGCGTTCGTCACGTCTGCCGAGCTGGATCCGTACCTTGCGGGACACTTCCGGCAGACGCGTGCTCCAGCACAAACCCACAAAAGACGGCCAACAGCGAATGGAGGATCATTTTGCTGTGCACTTTCGTCACTTGTTGTTGTTTAATTTATTCTCGTTTTAGTCGATACACTTATTCGTTGCTTATTCCTACGCGAACGTTCACAATCTGATCACGGGGAAGGCCTTGAAACTGTTAATCACTTTGCT] [-] EMBL CNS09JJE [CAGACCGCGACGCCGCAACAGATTGCGGATGCTTGAATATCCTCC GTCCCAAGCTCATCGGCACACGCGACAGCACGATCGTGAACAGCTGACCCCCCGGCAGACTCTGGCAGAAGTTGAGCACGAGCTGATTGTTGACCGCCTTCAGCACCTGCCACGTGCCGGTAAACTGAACGTACTGCAGCTGTATCATCGAGCCGGACTGCGGAGAGGCCGAGATCCAGAACCCGGGCATCGATGTGTTGTAACGCAGCGTGTACTCCAGCGTGTGCTCCGACTCGTCCCAAATCAGGCGTAGGTTGCGCATCGTGCGCGGTTCATGCTGCAAATACTGATGGTTGCCCTGCTGACGGCGTTGCTGGTTTTGCTGCTCGTACGAGCTGCTCGGGCTCCGACCGCCGCTCGTACCGTAGCCGTACGAGGTCGCAAAACGGTCATAGTTCGTACCGGACGGGTTAGTGCGGCCACCGTATCCCGTCGATTGATCGTATACGGAGGTTGTCGCGTTCGTCACGTCTGCCGAGCTGGATCCGTACCTTGCGGGACACTTCCGGCAGACGCGTGCTCCAGCACAAACCCACAAAAGACGGCCAACAGCGAATGGAGGATCATTTTGCTGTGCACTTTCGTCACTTGTTGTTGTTTAATTTATTCTCGTTTTAGTCGATACACTTATTCGTTGCTTATTCCTACGCGAACGTTCACAATCTGATCACGGGGAAGGCCTTGAAACTGTTAATCACTTTGCT] [-] EMBL CNS093T3 [ ATATCCTCCGGTCCCAAGCTCATCGGCACACGCGACAGCACGATCGTGAACAGCTGACCCCCCGGCAGACTCTGGCAGAAGTTGAGCACGAGCTGATTGTTGACCGCCTTCAGCACCTG CACGTGCCGGTAAACTGAACGTACTGCAGCTGTATCATCGAGCCGGACTGCGGAGAGGCCGAGATCCAGAACCCGGGCATCGATGTGTTGTAACGCAGCGTGTACTCCAGCGTGTGCTCCGACTCGTCCCAAATCAGGCGTAGGTTGCGCATCGTGCGCGGTTCATGCTGCAAATACTGATGGTTGCCCTGCTGACGGCGTTGCTGGTTTTGCTGCTCGTACGAGCTGCTCGGGCTCCGACCGCCGCTCGTACCGTAGCCGTACGAGGTCGCAAAACGGTCATAGTTCGTACCGGACGGGTTAGTGCGGCCACCGTATCCCGTCGATTGATCGTATACGGAGGTTGTCGCGTTCGTCACGTCTGCCGAGCTGGATCCGTACCTTGCGGGACACTTCCGGCAGACGCGTGCTCCAGCACAAACCCACAAAAGACGGCCAACAGCGAATGGAGGATCATTTTGCTGTGCACTTTCGTCACTTGTTGTTGTTTAATTTATTCTCGTTTTAGTCGATACACTTATTCGTTGCTTATTCCTACGCGAACGTTCACAATCTGATCACGGGGAAGGCCTTGAAACTGTTAATCACTTTGCT] [-] EMBL CNS095DU [ GACCGCCGCTCGTACCGTAGCCGTACGAGGTCGCAAAACGGTCATAGTTCGTACCGGACGGGTTAGTGCGGCCACCGTATCCCGTCGATTGATCGTATACGGAGGTTGTCGCGTTCGTCACGTCTGCCGAGCTGGATCCGTACCTTGCGGGACACTTCCGGCAGACGCGTGCTCCAGCACAAACCCACAAAAGACGGCCAACAGCGAATGGAGGATCATTTTGCTGTGCACTTTCGTCACTTGTTGTTGTTTAATTTATTCTCGTTTTAGTCGATACACTTATTCGTTGCTTATTCCTACGCGAACGTTCACAATCTGATCACGGGGAAGGCCTTGAAACTGTTAATCACTTTGCT] consensusID : consensus_9860#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 610 fasta sequence [TGTTGTCGCGTTTCGTCTACGGTCTGGCCAGTTGGATTACCAACGCAGGTTTTTGTAGACCCGATTGCGCCCTCCTCGCGACCTTGGTGCGCTGGCCGTGATCCACTTCGTCTCCCCANACCAGAGTGCCCATAATCTGGTCAAATGTCGAGCCCCATCGCTGGGGATTGAAATCCCGTACAGTGCTGCGAGGGACCAGTGCCACGGTTTTTCTCGCCGAGCTGGTATCCGTACCCTTGCGGGACACTTCCGGCAGACGCGTGCTCCAGCACTNGATATACCACATTATAGTACAGCCAACAGCGAATGGAGGATCATTTTTGTTGCTGTGCACTTTCGTCACTTGTTGTTGTTTAATTTATACTCGTTTTTTTTCGATACACTTATTCGTGGCTTATTGTCTACGCAGAACGTTCACAATCTGATCACGGGGAAGCCCTTGAAACTGTTAATCACTTTGCTCGCTACTACTTGTCCCAACATAACGCAGCTTTAACCCACACACTTCTCTATGGTTGCCAGAAGCTTCAACACATCAGACGACTCGAAACACAGNGCGAGANCGGAACNCGCGCACGACGACGCCGCNTTNAGCCAGGGTTCGNGCCTG] [-] EMBL BX468303 [TGTTGTCGCGTTTCGTCTACGGTCTGGCCAGTTGGATTACCAACGCAGGTTTTTGTAGACCCGATTGCGCCCTCCTCGCGACCTTGGTGCGCTGGCCGTGATCCACTTCGTCTCCCCANACCAGAGTGCCCATAATCTGGTCAAATGTCGAGCCCCATCGCTGGGGATTGAAATCCCGTACAGTGCTGCGAGGGACCAGTGCCACGGTTTTTCTCGCCGAGCTGGTATCCGTACCCTTGCGGGACACTTCCGGCAGACGCGTGCTCCAGCACTNGATATACCACATTATAGTACAGCCAACAGCGAATGGAGGATCATTTTTGTTGCTGTGCACTTTCGTCACTTGTTGTTGTTTAATTTATACTCGTTTTTTTTCGATACACTTATTCGTGGCTTATTGTCTACGCAGAACGTTCACAATCTGATCACGGGGAAGCCCTTGAAACTGTTAATCACTTTGCTCGCTACTACTTGTCCCAACATAACGCAGCTTTAACCCACACACTTCTCTATGGTTGCCAGAAGCTTCAACACATCAGACGACTCGAAACACAGNGCGAGANCGGAACNCGCGCACGACGACGCCGCNTTNAGCCAGGGTTCGNGCCTG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9860#0 GTTATGCAAACGGTATATTTTATTTCTTTCTGTAAGGCTTGCGAAGCAATCGTTGAATTC 60 consensus_9860#1 ------------------------------------------------------------ consensus_9860#2 ------------------------------------------------------------ consensus_9860#0 CACACACACGAGACTTAAATGAAAGATGAACTTTGGAATGGAATAAAGACACGTGAGCAC 120 consensus_9860#1 ------------------------------------------------------------ consensus_9860#2 ------------------------------------------------------------ consensus_9860#0 AAAACAAACATCTGGATCGTAGATGAAGGAAGATGGCACTGACAAAAACTGCTGCTGCTA 180 consensus_9860#1 ------------------------------------------------------------ consensus_9860#2 ------------------------------------------------------------ consensus_9860#0 TTAAGATGGCAATTTAAAACATTCAGTGCAACCGTTTGACTAGGGCAGTTACGACGGCCA 240 consensus_9860#1 ------------------------------------------------------------ consensus_9860#2 ------------------------------------------------------------ consensus_9860#0 GAGCCGCGATGGCGAACATCGAAAAGTCACCGCGTGAGGCACCACTCTGGCAGACCTTGC 300 consensus_9860#1 ------------------------------------------------------------ consensus_9860#2 ------------------------------------------------------------ consensus_9860#0 GCACCGAAGTTGTCGACAGACCGCGACGCCGCAACAGATTGCGGATGCTTTGAATATCCT 360 consensus_9860#1 ----------------CAGACCGCGACGCCGCAACAGATTGCGGATGCTT-GAATATCCT 43 consensus_9860#2 ------------------------------------------------------------ consensus_9860#0 CCGGTCCCAAGCTCATCGGCACACGCGACAGCACGATCGTGAACAGCTGACCCCCCGGCA 420 consensus_9860#1 CCG-TCCCAAGCTCATCGGCACACGCGACAGCACGATCGTGAACAGCTGACCCCCCGGCA 102 consensus_9860#2 ------------------------------------------------------------ consensus_9860#0 GACTCTGGCAGAAGTTGAGCACGAGCTGATTGTTGACCGCCTTCAGCACCTGCACCGTGC 480 consensus_9860#1 GACTCTGGCAGAAGTTGAGCACGAGCTGATTGTTGACCGCCTTCAGCACCTGCCACGTGC 162 consensus_9860#2 ------------------------------------------------------------ consensus_9860#0 CGGTAAACTGAACGTACTGCAGCTGTATCATCGAGCCGGACTGCGGAGAGGCCGAGATCC 540 consensus_9860#1 CGGTAAACTGAACGTACTGCAGCTGTATCATCGAGCCGGACTGCGGAGAGGCCGAGATCC 222 consensus_9860#2 ------------------------------------------------------------ consensus_9860#0 AGAACCCGGGCATCGATGTGTTGTAACGCAGCGTGTACTCCAGCGTGTGCTCCGACTCGT 600 consensus_9860#1 AGAACCCGGGCATCGATGTGTTGTAACGCAGCGTGTACTCCAGCGTGTGCTCCGACTCGT 282 consensus_9860#2 -------------------------------------------TGT-TGTCGCGTTTCGT 16 ** ** ** **** consensus_9860#0 CCCAAATCAGGCGTAGGTTGCGCATCGTGCGCGGTTCATGCTGCAAATACTGATGGTTGC 660 consensus_9860#1 CCCAAATCAGGCGTAGGTTGCGCATCGTGCGCGGTTCATGCTGCAAATACTGATGGTTGC 342 consensus_9860#2 CTACGGTCTGGC--CAGTTGGATTACCAACGCAGGTTTT--TGTAGAC-CCGATTGC-GC 70 * ** *** **** * *** * * * ** * * * *** * ** consensus_9860#0 CCTGCTGACGGCGTTGCTGGTTTTGCTGCTCGTACGAGCTGCTCGGGCTCCGACCGCCGC 720 consensus_9860#1 CCTGCTGACGGCGTTGCTGGTTTTGCTGCTCGTACGAGCTGCTCGGGCTCCGACCGCCGC 402 consensus_9860#2 CCTCCTCGCGACCTTGGTG----CGCTGGCCGT--GATCCACTTCGTCTC---------C 115 *** ** ** * *** ** **** *** ** * ** * *** * consensus_9860#0 TCGTACCGTAGCCGTACGAGGTCGCAAAACGGTCATAGTTCGTACCGGACGGGTTAGTGC 780 consensus_9860#1 TCGTACCGTAGCCGTACGAGGTCGCAAAACGGTCATAGTTCGTACCGGACGGGTTAGTGC 462 consensus_9860#2 CCANACCAGAGT-------GCCCATAATCTGGTCAAATGTCGAGCCCCATCGCTGGGGAT 168 * *** ** * * ** ***** * *** ** * * * * consensus_9860#0 GGCCACCGTATCCCGTCGATTGATCGTATACGGAGGTTGTCGCGTTCGTCACGTCTGCCA 840 consensus_9860#1 GGCCACCGTATCCCGTCGATTGATCGTATACGGAGGTTGTCGCGTTCGTCACGTCTGCC- 521 consensus_9860#2 TG-----AAATCCCGTACAGTG-CTGCGAGGGACCAGTGCCACGGTTTTT---CTCGCC- 218 * ******* * ** * * ** * ** * * *** consensus_9860#0 GGTGGATTACAACGCAGGTTTTGTAGACCGATTCGCCCTCCTCGCGACTGTCGTGCGTGA 900 consensus_9860#1 ------------------------------------------------------------ consensus_9860#2 ------------------------------------------------------------ consensus_9860#0 TCACTTCGCTCCCATACCAGATGCCCATAATCTGGTCAATGTCGAGGCCATGCTGGGGAT 960 consensus_9860#1 ------------------------------------------------------------ consensus_9860#2 ------------------------------------------------------------ consensus_9860#0 TGAAATCCGTACAGTGCTGCGAGGGAGCAGTGCCACGGTTTTCTGCCGAGCTGG-ATCCG 1019 consensus_9860#1 -----------------------------------------------GAGCTGG-ATCCG 533 consensus_9860#2 -----------------------------------------------GAGCTGGTATCCG 231 ******* ***** consensus_9860#0 TACCCTTGCGGGACACTTCCGGCAGACGCGTGCTCCAGCACAAAA----CCACAA---AA 1072 consensus_9860#1 TACC-TTGCGGGACACTTCCGGCAGACGCGTGCTCCAGCACAAAC----CCACAA---AA 585 consensus_9860#2 TACCCTTGCGGGACACTTCCGGCAGACGCGTGCTCCAGCACTNGATATACCACATTATAG 291 **** ************************************ ***** * consensus_9860#0 GACGGCCAACAGCGAATGGAGGATCATTTT----GCTGTGCACTTTCGTCACTTGTTGTT 1128 consensus_9860#1 GACGGCCAACAGCGAATGGAGGATCATTTT----GCTGTGCACTTTCGTCACTTGTTGTT 641 consensus_9860#2 TACAGCCAACAGCGAATGGAGGATCATTTTTGTTGCTGTGCACTTTCGTCACTTGTTGTT 351 ** ************************** ************************** consensus_9860#0 GTTTAATTTATTCTCGTTTTAGT-CGATACACTTATTCGTTGCTTATT-CCTACGC-GAA 1185 consensus_9860#1 GTTTAATTTATTCTCGTTTTAGT-CGATACACTTATTCGTTGCTTATT-CCTACGC-GAA 698 consensus_9860#2 GTTTAATTTATACTCGTTTTTTTTCGATACACTTATTCGTGGCTTATTGTCTACGCAGAA 411 *********** ******** * **************** ******* ****** *** consensus_9860#0 CGTTCACAATCTGATCACGGGGAAGGCCTTGAAACTGTTAATCACTTTGCTCGCTACTAC 1245 consensus_9860#1 CGTTCACAATCTGATCACGGGGAAGGCCTTGAAACTGTTAATCACTTTGCT--------- 749 consensus_9860#2 CGTTCACAATCTGATCACGGGGAAGCCCTTGAAACTGTTAATCACTTTGCTCGCTACTAC 471 ************************* ************************* consensus_9860#0 TTCCCAACATAACGCAGCTTAACCCACACACTTCTCTATGGTTGGCAGAAGCTTCAACAC 1305 consensus_9860#1 ------------------------------------------------------------ consensus_9860#2 TTGTCCCAACATAACGCAGCTTTAACCCACACACTTCTCTATGGTTGCCAGAAGCTTCAA 531 consensus_9860#0 ATCAACGATCGAAACACAAGCGAGAACCGAAACCGAACCGACGCCGCAAGAGGTGACCGG 1365 consensus_9860#1 ------------------------------------------------------------ consensus_9860#2 CACATCAGACGACTCGAAACACAGNGCGAGANCGGAACNCGCGCACGACGACGCCGCNTT 591 consensus_9860#0 ACGCGTGGGCGG------- 1377 consensus_9860#1 ------------------- consensus_9860#2 NAGCCAGGGTTCGNGCCTG 610 |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||