These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9865#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 14 consensus length = 1483 fasta sequence [CCGTTCTGCTAGCTGTCAGGGGTGAACATTCGTCGTAAAACCCACAGCCACCACTCTTTCCCACTCCTCGGGTGATCACGGTTG-AAAAAAAAAACGCATCTTTTCTCGAAGCTTCCCTGGGCCGCACAAAAAAACCCACCTCACATTTCGGGTGCATTTAAGATCGCGCTTAGATTTCACCGCTCCCGGAAGTTGGTCGCTGCGTTGCTTGGCTCCATTGCCCTGTGCGTTACAACGAAGTCGTCGTCGCCGTGCGTGAGTGTGAC-TGACCACCGCTGTTTTGTGAGAGTTGTTTTTGGCGTATTCTACTCGTTGTGAAAATAGAAAATGACCCGTGGAAACCAGCGCGAATTGGCCCGTGCGAAGAACCAGAAAAAGAATGCCGGCCAGCCAAAGCAGCGGGACGATGGTCTCACACACGAGCAGAGGAAGCAGCGTGACGCTGACATCATGCGACAAAAGCAGTTGAAAAAGGAGCAAGATGCAAAGCATGCGATCAAGAGTTAATGTCCGTTCCGGACACGATCGCCCACCACAAACCA-CCACCACCAAGCGCCAAACAAACGCATCCTCTATCCCTCATTTCTTCGTGCAAAACCAATCGCGAAAACCATAGG-CC-AAAACCGATCGCACCGACAACAACAACAACACTCTAACTGACACCG------CGGTGTGCTGCATCGTGCGCTCGGGTATA-TTCAGCTAAA-TTGAAAGGTTATTATAAATCGCATCTTGCAAATTCAATTCCCG-TTTGCTTTTGGGGCTGCGTTGGCTTTTGATTCGCCTCTTCTTCGTCTCGACACTGTGTGCAAGATGGCCATTGTTTTTCTCACTGAAACCACCCGCACACACACTGAGAAAAGGGTTCTCGGGTGTGTGTGTGCACCACACCACCACACACCACAGGGCATTTCCCTTTATGTTTTCAGGCTTTACTTTTATACTATTTAGTGTGTAAGCGTGTGGGATGATTCAAAAAAAGGCCCACAGTCCAAACAGCAAAACCACCTCCCGATTAAAAGCAATAGCAACTGCAACTGCAAACTCAGCGAGCTCAAACCAAGCTAAGCGCAACCGCATAGTAGGCTGTAAAACGGTGTAAAACAGCAGACAGCATAGGACATACACACACACATACAGACACGCGTTTCAAGTATTGTT-AAAGTT-ATACATGAAAGGATCGG-TTGTGG-GGGGTAGCCTAAACACCTAGCGTCTACTGTGGTCGG-TGTAGTGGGTAGTAGTACTAGGACAGGACACGCGGTTTAGCAATAGCGCACATTCAAATTTAAAGCAAAACATAAAACACATAAACAATGGGGCCGAGAGGAGTACAATTGATTGCTTTTTCCTACTATATGTTGACGCGTGCTCTGCGAAGTGCGAAAGGAGCATGGAGCCATACAAAAGCGTCACAGCGGTTGGATTAGGAACATGTTTGTATGGATAATTGAAATGTGAAGCTTGTTTTTGTATAGATTCACGATTA] [+] EMBL BM644977 [CCGTTCTGCTAGCTGTCAGGGGTGAACATTCGTCGTAAAACCCACAGCCACCACTCTTTCCCACTCCTCGGGTGATCACGGTTG AAAAAAAAAACGCATCTTTTCTCGAAGCTTCCCTGGGCCGCACAAAAAAACCCACCTCACATTTCGGGTGCATTTAAGATCGCGCTTAGATTTCACCGCTCCCGGAAGTTGGTCGCTGCGTTGCTTGGCTCCATTGCCCTGTGCGTTACAACGAAGTCGTCGTCGCCGTGCGTGAGTGTGAC TGACCACCGCTGTTTTGTGAGAGTTGTTTTTGGCGTATTCTACTCGTTGTGAAAATAGAAAATGACCCGTGGAAACCAGCGCGAATTGGCCCGTGCGAAGAACCAGAAAAAGAATGCCGGCCAGCCAAAGCAGCGGGACGATGGTCTCACACACGAGCAGAGGAAGCAGCGTGACGCTGACATCATGCGACAAAAGCAGTTGAAAAAGGAGCAAGATGCAAAGCATGCGATCAAGAGTTAATGTCCGTTCCGGACACGATCGCCCACCACAAACCA CCACCACCAAGCGCCAAACAAACGCATCCTCTATCCCTCATTTCTTCGTGCAAAACCAATCGCGAAAACCATAGG CC AAAACCGATCGCACCGACAACAACAACAACACTGTAACTGACACCGg ] [+] EMBL BM586225 [ ccgAAAACCCACAGCCACCACTCTTTCCCACTCCTCGGGTGATCACGGTTG AAAAAAAACGCATCTTTTCTCGAAGCTTCCCTGGGCCGC AAAAAACCCTCCTCACATTTTGGGTGCATTTAAGATCGCGCTTAGATTTCACCGCTCCCGGAAGTTGGTCGCTGCGTTGCTTGGCTCCATTGCCCTCTGCGTTACAACGAAGTCGTCGTCGCCGTGCGTGAGTGTGAC TGACCACCGCCG TTTGTGAGAGTTGTTTTTGGCGTATTCTACTCGTTGTGAAAATAGAAAATGACCCGTGGAAACCAGCGCGAATTGGCCCGTGCGAAGAACCAGAAAAAGAATGCCGGCCAGCCAAAGCAGCGGGACGATGGTCTCACACACGAGCAGAGGAAGCAGCGTGACGCTGACATCATGCGACAAAAGCAGTTGAAAAAGGAGCAAGATGCAAAGCATGCGATCAAGAGTTAATGTCCGTTCCGGACACGATCGCCCACCACAAACCA CCACCACCAAGCGCCAAACAAACGCATCCTCTGTCCCTCATTTCTTCGTGTAAAACCAATCGCGAAAACCATAGG CC AAAACTGATCGCA TCAACAACAACAACACTCTAACTGACAC CGGTGTGCTGCATCGTGCGCTCGGGTATA TTCAGCTAA ] [+] EMBL BM597593 [ ccgGCCACCACTCTTTCCCACTCCTCGGGTGATCACGGTTG AAAAAAAAAACGCATCTTTTCTCGAAGCTTCCCTGGGCCGCACAAAAAAACCCACCTCACATTTCGGGTGCATTTAAGATCGCGCTTAGATTTCACCGCTCCCGGAAGTTGGTCGCTGCGTTGCTTGGCTCCATTGCCCTGTGCGTTACAACGAAGTCGTCGTCGCCGTGCGTGAGTGTGAC TGACCACCGCTGTTTTGTGAGAGTTGTTTTTGGCGTATTCTACTCGTTGTGAAAATAGAAAATGACCCGTGGAAACCAGCGCGAATTGGCCCGTGCGAAGAACCAGAAAAAGAATGCCGGCCAGCCAAAGCAGCGGGACGATGGTCTCACACACGAGCAGAGGAAGCAGCGTGACGCTGACATCATGCGACAAAAGCAGTTGAAAAAGGAGCAAGATGCAAAGCATGCGATCAAGAGTTAATGTCCGTTCCGGACACGATCGCCCACCACAAACCA CCACCACCAAGCGCCAAACAAACGCATCCTCTATCCCTCATTTCTTCGTGCAAAACCAATCGCGAAAACCATAGG CC AAAACCGATCGCACCGACAACAACAACAACACTGTAACTGACAC CGGTGTGCTGCATCGTGCGCTCGGG ] [+] EMBL BM581758 [ CCGCTCCTCGGGTGATCACGGTTG AAAAAAAAAACGCATCTTTTCTCGAAGCTTCCCTGGGCCGCACAAAAAAACCCACCTCACATTTCGGGTGCATTTAAGATCGCGCTTAGATTTCACCGCTCCCGGAAGTTGGTCGCTGCGTTGCTTGGCTCCATTGCCCTGTGCGTTACAACGAAGTCGTCGTCGCCGTGCGTGAGTGTGAC TGACCACCGCTGTTTTGTGAGAGTTGTTTTTGGCGTATTCTACTCGTTGTGAAAATAGAAAATGACCCGTGGAAACCAGCGCGAATTGGCCCGTGCGAAGAACCAGAAAAAGAATGCCGGCCAGCCAAAGCAGCGGGACGATGGTCTCACACACGAGCAGAGGAAGCAGCGTGACGCTGACATCATGCGACAAAAGCAGTTGAAAAAGGAGCAAGATGCAAAGCATGCGATCAAGAGTTAATGTCCGTTCCGGACACGATCGCCCACCACAAACCA CCACCACCAAGCGCCAAACAAACGCATCCTCTATCCCTCATTTCTTCGTGCAAAACCAATCGCGAAAACCATAGG CC AAAACCGATCGCACCGACAACAACAACAACACTGTAACTGACAC CGGTGTGCTGCATCGTGCGCTCGGGTGTA TTCAGCTAAA TTGAAAGGTTATTATAAATCGCATCTTGC ] [+] EMBL BX606600 [ GTGATCACGGTTGAAAAAAAAAAACGCATCTTTTCTCGAAGCTTCCCTGGGCCGCACAAAAAAACCCACCTCACATTTCGGGTGCATTTAAGATCGCGCTTAGATTTCACCGCTCCCGGAAGTTGGTCGCTGCGTTGCTTGGCTCCATTTCCCTGTGCGTTACAACGAA GTCGTCGCCGTGCGTGAGTGTGACTTGACCACCGCTGTTTTGTGAGAGTTGTTTTTGGCGTATTCTACTCGTTGTGAAAATAGAAAATGACCCGTGGAAACCAGCGCGAATTGGCCCGTGCGAAGAACCAGAAAAAGAATGCCGGCCAGCCAAAGCAGCGGGACGATGGTCTAACGCACGAGCAGAGGAAGCAGCGTGACGCTGACATCATGCGACAAAAGCAGTTGAAAAAGGAGCAAGATGCAAAGCATGCGATCAAGAGTTAATGTCCGTTCCGGACACGATCGCCCACCACAAACCA CCACCACCAAGCGCCAAACAAACGCATCCTCTGTCCCTCATTTCTTCGTGTAAAACCAATCGCGAAAACCATAGGCCC AAAACCGATCGCAC CAACAACAACAACACTCTAACTGACACCGGAAAC CGGTGTGCTGCATCGTGCGCTCGGGTATA TTCAGCTAAA TTGAAAGGTTATTATAAATtg ] [+] EMBL BM604133 [ ccgCACGGTTGAAAAAAAAAAACGCATCTTTTCTCGAAGCTTCCCTGGGCCGCACAAAAAAACCCACCTCACATTTCGGGTGCATTTAAGATCGCGCTTAGATTTCACCGCTCCCGGAAGTTGGTCGCTGCGTTGCTTGGCTCCATTGCCCTGTGCGTTACAACGAAGTCGTCGTCGCCGTGCGTGAGTGTGAC TGACCACCGCTGTTTTGTGAGAGTTGTTTTTGGCGTATTCTACTCGTTGTGAAAATAGAAAATGACCCGTGGAAACCAGCGCGAATTGGCCCGTGCGAAGAACCAGAAAAAGAATGCCGGCCAGCCAAAGCAGCGGGACGATGGTCTCACACACGAGCAGAGGAAGCAGCGTGACGCTGACATCATGCGACAAAAGCAGTTGAAAAAGGAGCAAGATGCAAAGCATGCGATCAAGAGTTAATGTCCGTTCCGGACACGATCGCCCACCACAAACCA CCACCACCAAGCGCCAAACAAACGCATCCTCTATCCCTCATTTCTTCGTGCAAAACCAATCGCGAAAACCATAGG CCAAAAACCGATCGCACCGACAACAACAACAACACTGTAACTGACACCG GG GTGCTGCATCGTGCGCTCGGGTGTA ] [+] EMBL BM621249 [ ccgCACGGTTG AAAAAAAAAACGCATCTTTTCTCGAAGCTTCCCTGGGCCGCACAAAAAAACCCACCTCACATTTCGGGTGCATTTAAGATCGCGCTTAGATTTCACCGCTCCCGGAAGTTGGTCGCTGCGTTGCTTGGCTCCATTGCCCTGTGCGTTACAACGAAGTCGTCGTCGCCGTGCGTGAGTGTGAC TGACCACCGCTGTTTTGTGAGAGTTGTTTTTGGCGTATTCTACTCGTTGTGAAAATAGAAAATGACCCGTGGAAACCAGCGCGAATTGGCCCGTGCGAAGAACCAGAAAAAGAATGCCGGCCAGCCAAAGCAGCGGGACGATGGTCTCACACACGAGCAGAGGAAGCAGCGTGACGCTGACATCATGCGACAAAAGCAGTTGAAAAAGGAGCAAGATGCAAAGCATGCGATCAAGAGTTAATGTCCGTTCCGGACACGATCGCCCACCACAAACCACCCACCAC ] [+] EMBL BM653221 [ ccgCGGTTG AAAAAAAACGCATCTTTTCTCGAAGCTTCCCTGGGCCGC AAAAAACCCTCCTCACATTTTGGGTGCATTTAAGATCGCGCTTAGATTTCACCGCTCCCGGAAGTTGGTCGCTGCGTTGCTTGGCTCCATTGCCCTCTGCGTTACAACGAAGTCGTCGTCGCCGTGCGTGAGTGTGAC TGACCACCGCCG TTTGTGAGAGTTGTTTTTGGCGTATTCTACTCGTTGTGAAAATAGAAAATGACCCGTGGAAACCAGCGCGAATTGGCCCGTGCGAAGAACCAGAAAAAGAATGCCGGCCAGCCAAAGCAGCGGGACGATGGTCTCACACACGAGCAGAGGAAGCAGCGTGACGCTGACATCATGCGACAAAAGCAGTTGAAAAAGGAGCAAGATGCAAAGCATGCGATCAAGAGTTAATGTCCGTTCCGGACACGATCGCCCACCACAAACCA CCACCACCAAGCGCCAAACAAACGCATCCTCTGTCCCTCATTTCTTCGTGTAAAACCAATCGCGAAAACCATAGG CC AAAACTGATCGCA TCAACAACAACAACACTCTAACTGACAC CGGTGTGCTGCATCGTGCGCTCGGGTATA TTCAGCTAAA TTGAAAGGTTATTATAAATCGCATCTTGCAAATTCAATTCCCG TTTGCTTTTGGGGCTGCGTTGGC ] [+] EMBL BX623967 [ CAAAAAAACCCACCTCACATTTCGGGTGCATTTAAGATCGCGCTTAGATTTCACCGCTCCCGGAAGTTGGTCGCTGCGTTGCTTGGCTCCATTTCCCTGTGCGTTACAACGAA GTCGTCGCCGTGCGTGAGTGTGACTTGACCACCGCTGTTTTGTGAGAGTTGTTTTTGGCGTATTCTACTCGTTGTGAAAATAGAAAATGACCCGTGGAAACCAGCGCGAATTGGCCCGTGCGAAGAACCAGAAAAAGAATGCCGGCCAGCCAAAGCAGCGGGACGATGGTCTAACGCACGAGCAGAGGAAGCAGCGTGACGCTGACATCATGCGACAAAAGCAGTTGAAAAAGGAGCAAGATGCAAAGCATGCGATCAAGAGTTAATGTCCGTTCCGGACAC ] [+] EMBL BM613952 [ ccggcAAAAAACCCTCCTCACATTTTGGGTGCATTTAAGATCGCGCTTAGATTTCACCGCTCCCGGAAGTTGGTCGCTGCGTTGCTTGGCTCCATTGCCCTCTGCGTTACAACGAAGTCGTCGTCGCCGTGCGTGAGTGTGAC TGACCACCGCCG TTTGTGAGAGTTGTTTTTGGCGTATTCTACTCGTTGTGAAAATAGAAAATGACCCGTGGAAACCAGCGCGAATTGGCCCGTGCGAAGAACCAGAAAAAGAATGCCGGCCAGCCAAAGCAGCGGGACGATGGTCTCACACACGAGCAGAGGAAGCAGCGTGACGCTGACATCATGCGACAAAAGCAGTTGAAAAAGGAGCAAGATGCAAAGCATGCGATCAAGAGTTAATGTCCGTTCCGGACACGATCGCCCACCACAAACCA CCACCACCAAGCGCCAAACAAACGCATCCTCTGTCCCTCATTTCTTCGTGCAAAACCAATCGCGAAAACCATAGG CC AAAACCAATCGCACCAACAACAACAACAACACACTAACTGACACCGGAAAACCGGTGTGTTGCATCGTGCGCTCGGGTATATTTCAGCTAAATTTGAAAGGGTATTATAAATCGCATCTTGCAA ] [+] EMBL AL932001 [ cccgaggttAAAACATAGG CC CAAA CGATCGC ACAACAACAACAACACTCTAACTGACACCGGAAA CGGTGTGCTGCATCGTGCGCCCGGGTATA TTCAGCTAAA TTGAAAGGTTATTATAAATTGCATCTTGCAAATTCAATTCCCGTTTTGCTTTTGGGGCTGCGTTAGCTTTTGATTCGCCTCTTCTTCGTCTCGACACTGTGTGCAAGATGGCCATTGTTTTTCTCACTGAAACCACCCGCACACACACTGAGAAAAGGGTTCTCGGGTGTGTGTGTGCACCACACCACCACACACCACAGGGCATTTCCCTTTATGTTTTCAGGCTTTACTTTTATACTATTTAGTGTGTAAGCGTGTGGGATGATTCAAAAAAAGGCCCACAGTCCAAACAGCAAAACCACCTCCCGATTAAAAGCAATAGCAACTGCAACTGCAAACTCAGCGAGCTCAAACCAAGCTAAGCGCAACCGCATAGTAGGCTGTAAAACGGTGTAAAACAGCAGACAGCATAGGACATACACACACACATACAGACACGCGTTTCAAGTACTGTTCAAAGTT ATACATGAAAGGATCGG TAGTGGCGGGGTAGCCTAAACACCTAGCGTCTACTGTGGTCGG TGTAGTGGGTAGTAGTACTAGGACAGGACACGCGGTTTAGCAATAGCGCACATTCAAATTTAAAGCAAAACATAAAACACATAAACA ] [+] EMBL BX614132 [ TTATACTATTTAGTGTGTAAGCGTGTGGGATGATTCAAAAAAAGGCCCACAGTCCAAACAGCAAAACCACCTCCCGATTAAAAGCAATAGCAACTGCAACTGCAAACTCAGCGAGCTCAAACCAAGCTAAGCGCAACCGCATAGTAGGCTGTAAAACGGTGTAAAACAGCAGACAGCATAGGACATACACACACACATACAGACACGCGTTTCAAGTATTGTT AAAGTTAATACATGAAAGGATCGGTTTGTGG GGGGTAGCCTAAACACCTAGCGTCTACTGTGGTCGG TGTAGTGGGTAGTAGTACTAGGACAGGACACGCGGTTTAGCAATAGCGCACATTCAAATTTAAAGCAGAACATAAAACACATAAACAATGGGGCCGAGAGGAGTACAATTGATTGCTTTTTCCTACTATATGTTGACGCGTGCTCTGCGAAGTGCGAAAGGAGCATGGAGCCATA ] [+] EMBL BX623227 [ GGTGTAAAACAGCAGACAGCATAGGACATACACACACACATACAGACACGCGTTTCAAGTATTGTT AAAGTTAATACATGAAAGGATCGGTTTGTGG GGGGTAGCCTAAACACCTAGCGTCTACTGTGGTCGGNNGTAGTGGGTAGTAGTACTAGGACAGGACACGCGGTTTAGCAATAGCGCACATTCAAATTTANANCAAAACATAAAACACATAAACAATGGGGCCGAGAGGAGTACAATTGATTGCTTTTTCCTACTATATGTTGACGCGTGCTCTGCGAAGTGCGAAAGGAGCATGGAGCCATACAAAAGCGTCACAGCGGTTGGATTAGGAACATGTTTGTATGGATAATTGAAATGTGAAGCTTGTTTTTGTATAGATTCACGATTA] [+] EMBL BX618042 [ GGGTAGTAGTACTAGGACAGGACACGCGGTTTAGCAATAGCGCACATGCAAAGGGAAAGCAAAACATAAAACACATAAACAAGGGGGCCGAGAGGAGTAC ] consensusID : consensus_9865#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1192 fasta sequence [TTAGTGTGTAAGCGTGTGGGATGATAGTAGATGTACGCGACAAAGGCCCACAGTCCAAACAGCAAAACCACCTCCCGATTAAAAGCAATAGCAACTGCAACTGCAAACTCAGCGAGCTCAAACCAAGCTAAGCGCAACCGCATAGTAGGCTGTAAAACGGTGTAATACAGCAGACAGCATAGGACATACACACACACATACAGACACGCGTTTCAAGTATTGTTAAAGTTAAAACATGAAAGGATCGATTTGTGGGAGGGGTAGCCTAAACACCTAGCGTCTACTGTGGTCGGTGTAGTGGTAGCAGTGCTAGAACAGGACACGCGGTTAGCAATAGCGCACAGTCAGATTTAAAGCAAAAACATAAAACACATAAACAATGGGGCCGGGAGGAGTACAATTGAATGCTTTTTCCTATGTTGACGCGTGCTCTGCGAAGTGCGAAAGGAGCATGGAGCCATACAAAAGCGTCACAGCGACTGGATTTAGAACATGTTTGTATGGATAATTTAAATGTGAAGCTTGTTTTGGTATAGGTTCACACTTATCGTCCATCGATTGTGTACGTGTTTAGTGTAACTGCAGGCTACAAACTCTACATACAACCTTTCCGTGTCTGCATGACAGAGTTTTGTGTCTTATAGATGCTACTCCAGAAACAGAGCGAACAACTCAATTGAAAGATGTTGTGCTTGAGCGTTTAAACACAGGTCAATAATTTTC-TTATTTTGTGTTTTGAGTTTGCTTTATCAAAAGTAATATCCATTCAATAGAAAATTTGTGGAGCGTATG-AGCGTGTG----ACAT-GAGTGC--GATTTTGATGCTGCAAATGGAGCGCGTTTTATAGGGAATGATCGATGACTGATGAAGTAAGGGTAGAGAGAAAATGCGTGCAAAATACGATAGGAGGTTCATTTTTATAC-TTTTTTTTTTGCTACTGTGCTATTTTTTAAAATAATAATTATACTTAATTAAAACAAAATCTACTGCTCCCCAAGCAAGCAAAAGAATGTTAC-AAAAAAAACCGACGGCGCGCATACTACTAAGCTAGCACTATACGTATGCGCTATGCGTTGGGATGATTAATTACCCCTTTCTCTCCTCCTCCCCACTATTTCCCATCCCCCCAATCGTAGC--TGTTGTATAGAAGATCGTAAAGTAAATAGAATTAAACGCAAATAAAACCACCATGAAT] [+] EMBL BM612939 [TTAGTGTGTAAGCGTGTGGGATGATAGTAGATGTACGCGACAAAGGCCCACAGTCCAAACAGCAAAACCACCTCCCGATTAAAAGCAATAGCAACTGCAACTGCAAACTCAGCGAGCTCAAACCAAGCTAAGCGCAACCGCATAGTAGGCTGTAAAACGGTGTAATACAGCAGACAGCATAGGACATACACACACACATACAGACACGCGTTTCAAGTATTGTTAAAGTTAAAACATGAAAGGATCGATTTGTGGGAGGGGTAGCCTAAACACCTAGCGTCTACTGTGGTCGGTGTAGTGGTAGCAGTGCTAGAACAGGACACGCGGTTAGCAATAGCGCACAGTCAGATTTAAAGCAAAAACATAAAACACATAAACAATGGGGCCGGGAGGAGTACAATTGAATGCTTTTTCCTATGTTGACGCGTGCTCTGCGAAGTGCGAAAGGAGCATGGAGCCATACAAAAGCGTCACAGCGACTGGATTTAGAACATGTTTGTATGGATAATTTAAATGTGAAGCTTGTTTTGGT ] [+] EMBL BM636457 [ ccgGTATTGTTAAAGTTAAAACATGAAAGGATCGATTTGTGGGAGGGGTAGCCTAAACACCTAGCGTCTACTGTGGTCGGTGTAGTGGTAGCAGTGCTAGAACAGGACACGCGGTTAGCAATAGCGCACAGTCAGATTTAAAGCAAAAACATAAAACACATAAACAATGGGGCCGGGAGGAGTACAATTGAATGCTTTTTCCTATGTTGACGCGTGCTCTGCGAAGTGCGAAAGGAGCATGGAGCCATACAAAAGCGTCACAGCGACTGGATTTAGAACATGTTTGTATGGATAATTTAAATGTGAAGCTTGTTTTGGTATAGGTTCACACTTATCGTCCATCGATTGTGTACGTGTTTAGTGTAACTACAGGCTACAAACTCTACATACAACCCTTCCGTGTCTGCATGACAGAGTTTTGTGTCTTATAGATGCTACTCCAGAAACAGAGCGAACAACTCAATTGAAAGATGTTGTGCTTGAGCCTTTAAACACAGTTGAATAATTTTCTTTTTTTTGTGTTTTGAGTTTGCTTTATCAAAAGTAATATTCATTCAATAGAATTTGTGTGGAGCGTATGAAGCGTGTGAGTTATATGGTGTGCGTGGTTTTGATGCTGCAAATGAAGCGCGTTTTATAGGGAATGATC ] [+] EMBL BX625108 [ TATTGTTAAAGTTAAAACATGAAAGGATCGATTTGTGGGAGGGGTAGCCTAAACACCTAGCGTCTACTGTGGTCGGTGTAGTGGTAGCAGTGCTAGAACAGGACACGCGGTTAGCAATAGCGCACAGTCAGATTTAAAGCAAAAACATAAAACACATAAACAATGGGGCCGGGAGGAGTACAATTGAATGCTTTTTCCTATGTTGACGCGTGCTCTGCGAAGTGCGAAAGGAGCATGGAGCCATACAAAAGCGTCACAGCGACTGGATTTAGAACATGTTTGTATGGATAATTTAAATGTGAAGCTTGTTTTGGTATAGGTTCACACTTATCGTCCATCGATTGTGTACGTGTTTAGTGTAACTACAGGCTACAAACTCTACATACAACCCTTCCGTGTCTGCATGACAGAGTTTTGTGTCTTATAGATGCTACTCCAGAAACAGAGCGAACAACTCAATTGAAAGATGTTGTGCTTGAGCCTTTAAACACAGTTGAATAATTTTCTTTTTTTTGTGTTTTGAGTTTGCTTTATCAAAAGTAATATTCATTCAATAGAATTTGTGTGGAGCGTATG AGCGTGTGAGTTATAT GTGTGCGTGGTTTTGATGCTGCAAATGAAGCGCGTTTTATAGGGAATGATCGATGACTGATGAAGTAAGGGTAGAGAGAAAATGCGTGCAAAATACGATAGGAGGTTCATTTTTATAC TTTTTGNTTTGCTACTGNGCTATTTTTTTAAATAATAATTATACTTAATTAAAACAAAATCTACTGCTCCCCAACCAAGCAAAAGAATGTTACNAAAAAAAACCGACGGCGCGCATACTACTAAGCTAGCACTATACGTATGCGCTATGCGTTGGGATGATTAA ] [+] EMBL BX618339 [ CATACAAAAGCGTCACAGCGGTTGGATTAGGAACATGTTTGTATGGATAATTGAAATGTGAAGCTTGTTTTTGTATAGATTCACGATTATCGTCCATCGATTGTGTACGTGTTTAGTGTAACTGCAGGCTACAAACTCTACATACAACCTTTCCGTGTCTGCATGACAGAGTTTTGTGTCTTATAGATGCTACTCCAGAAACAGAGCGAACAACTCAATTGAAAGATGTTGTGCTTGAGCGTTTAAACACAGGTCAATAATTTTC TTATTTTGTGTTTTGAGTTTGCTTTATCAAAAGTAATATCCATTCAATAGAAAATTTGTGGAGCGTATG AGCGTTTG ACAT GAGTGC GATTTTGATGCTGCAAATGGAGCGCGTTTTATAGGGAATGATCGATGACTGATGAAGTAAGGGTAGAGAGAAAATGCGTGC AAATACGATAGGAGGTTCATTTTTATACTTTTTTTTTTTGCTACTGTGCTATTTTTTAAAATAGTAATTATACTTAATTAAAACAAAATCTACTGCTCCCCAAGCAAGCAAAAGAATGTTAC AAAAAAAACCGACGGCGCGCATACTACTAAGCTAGCACTATACGTATGCGCTATGCGTTGGGATGATTAATTACCCCTTTCTCTCCTCCTCCCCACTATTTCCCATCCCCCCAATCGTAGC TGTTGTATAGAAGATCGTAAAGTAAATAGAAT ] [+] EMBL BX608050 [ CACGATTATCGTCCATCGATTGTGTACGTGTTTAGTGTAACTGCAGGCTACAAACTCTACATACAACCTTTCCGTGTCTGCATGACAGAGTTTTGTGTCTTATAGATGCTACTCCAGAAACAGAGCGAACAACTCAATTGAAAGATGTTGTGCTTGAGCGTTTAAACACAGGTCAATAATTTTC TTATTTTGTGTTTTGAGTTTGCTTTATCAAAAGTAATATCCATTCAATAGAAAATTTGTGGAGCGTATG AGCGTGTG ACAT GAGTGC GATTTTTATGCTGCAAATGGAGCGCGTTTTATAGGGAATGATCGATGACTGATGAAGTAAGGGTAGAGAGAAAATGCGTGCAAAATACGATAGGAGGTTCATTTTTATAC TTTTTTTTTTGCTACTGTGCTATTTTTTAAAATAATAATTATACTTAATTAAAACAAAATCT ] [+] EMBL BX608348 [ CTGCAGGCTACAAACTCTACATACAACCTTTCCGTGTCTGCATGACAGAGTTTTGTGTCTTATAGATGCTACTCCAGAAACAGAGCGAACAACTCAATTGAAAGATGTTGTGCTTGAGCGTTTAAACACAGGTCAATAATTTTC TTATTTTGTGTTTTGAGTTTGCTTTATCAAAAGTAATATCCATTCAATAGAAAATTTGTGGAGCGTATG AGCGTGTG ACAT GAGTGC GATTTTGATGCTGCAAATGGAGCGCGTTTTATAGGGAATGATCGATGACTGATGAAGTAAGGGTAGAGAGAAAATGCGTGCAAAATACGATAGGAGGTTCATTTTTATACTTTTTTTTTTTGCTACTGTGCTATTTTTTAAAATAATAATTATACTTAATTAAAACAAAATCTACTGCTCCCCAAGCAAGCAAAAGAATGTTAC AAAAAAAACCGACGGCGCGCATACTACTAAGCTAGCACTATACGTATGCGCTATGCGTTGGGATGATTAATTACCCCTTTCTCTCCTCCTCCCCACTATTTCCCATCCCCCCAATCGTAGCTGTGTTGTATAGAAGATCGTAAAGTAAATAGAATTAAACGCAAATAAAACCACCATGAAT] [+] EMBL BX618403 [ AGAGTTTTGTGTCTTATAGATGCTACTCCAGAAACAGAGCGAACAACTCAATTGAAAGAAGTTGTGCTTGAGCGTTTAAACACAGGTCAATAATTTTC TTATTTTGTGTTTTGAGTTTGCTTTATCAAAAGTAATATCCATTCAATAGAAAATTTGTGGAGCGTATG AGCGTGTG ACAT GAGTGC GAATTTGATGCTGCAAATGGAGCGCGTTTTATAGGGAATGATCGATGACTGATGAAGTAAGGGTAGAGAGAAAATGCGTGCAAAATACGATAGGAGGTTCATTTTTATAC TTTTTTTTTTGCTACTGTGCTATTTTTTAAAATAATAATTATACTTAATTAA ] consensusID : consensus_9865#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 657 fasta sequence [GCCCAGGATTAACGCATCTTTTCTCGAAGCTTCCCTGGGCCGCACAAAAAAACCCACCTCACATTTCGGGTGCATTTAAGATCGCGCTTAGATTTCACCGCTCCCGGAAGTTGGTCGCTGCGTTGCTTGGCTCCATTTCCCTGTGCGTTACAACGAAGTCGTCGCCGTGCGTGAGTGTGACTTGTACCACCGCTGTTTTGTGAGAGTTGTTTTTGGCGTATTCTACTCGTTGTGAAAATAGAACAATGACCCGTGGAAACCAGCGCGACATTGGGCCGTGCGAAGAACCAGAACAAAGAATGCCGGCCAGCAAAGCAGCGGGACGATGGTCTAACGCACGAGGCAGAGGAAGCAGCGTGACGCTGACATCATGCGACAAAAGCAGTTGAACANGGAGCACAGATGCAAAGCATGCGATCAAGAGTTAATGTCCGTTCCGGACACGATCGCCACCACAAACACACACCAAGCGCAAACAAACGCATTCTCTGTACCCTCATTTCTTCGTGTAAAACCAATCGCCGAAAACCATAGGCCAAAACCGATCGCGACAACGAACAACNACACTCTTAACTGACCACCGGAAANCGGTGTGCTGCATCTGGTGCGCTCCGGGTATATNCAGCTAAATTGNAAGGTCATTNATAAATTGCATCT] [+] EMBL AL693787 [GCCCAGGATTAACGCATCTTTTCTCGAAGCTTCCCTGGGCCGCACAAAAAAACCCACCTCACATTTCGGGTGCATTTAAGATCGCGCTTAGATTTCACCGCTCCCGGAAGTTGGTCGCTGCGTTGCTTGGCTCCATTTCCCTGTGCGTTACAACGAAGTCGTCGCCGTGCGTGAGTGTGACTTGTACCACCGCTGTTTTGTGAGAGTTGTTTTTGGCGTATTCTACTCGTTGTGAAAATAGAACAATGACCCGTGGAAACCAGCGCGACATTGGGCCGTGCGAAGAACCAGAACAAAGAATGCCGGCCAGCAAAGCAGCGGGACGATGGTCTAACGCACGAGGCAGAGGAAGCAGCGTGACGCTGACATCATGCGACAAAAGCAGTTGAACANGGAGCACAGATGCAAAGCATGCGATCAAGAGTTAATGTCCGTTCCGGACACGATCGCCACCACAAACACACACCAAGCGCAAACAAACGCATTCTCTGTACCCTCATTTCTTCGTGTAAAACCAATCGCCGAAAACCATAGGCCAAAACCGATCGCGACAACGAACAACNACACTCTTAACTGACCACCGGAAANCGGTGTGCTGCATCTGGTGCGCTCCGGGTATATNCAGCTAAATTGNAAGGTCATTNATAAATTGCATCT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9865#0 CCGTTCTGCTAGCTGTCAGGGGTGAACATTCGTCGTAAAACCCACAGCCACCACTCTTTC 60 consensus_9865#2 ------------------------------------------------------------ consensus_9865#1 ------------------------------------------------------------ consensus_9865#0 CCACTCCTCGGGTGATCACGGTTGAAAAAAAAAACGCATCTTTTCTCGA--AGCTTCCCT 118 consensus_9865#2 ----------------------GCCCAGGATTAACGCATCTTTTCTCGA--AGCTTCCCT 36 consensus_9865#1 ---------TTAGTGTGTAAGCGTGTGGGATGATAGTAGATGTACGCGACAAAGGCCCAC 51 * * * * * * * *** * ** consensus_9865#0 GGGCCGCACAAAAAAACCCACCTCACATTTCGGGTGCATTTAAGATCGCGCTTA-GATTT 177 consensus_9865#2 GGGCCGCACAAAAAAACCCACCTCACATTTCGGGTGCATTTAAGATCGCGCTTA-GATTT 95 consensus_9865#1 AGTCCAAACAGCAAAACC-ACCTCCCGATT-AAAAGCAATAGCAACTGCAACTGCAAACT 109 * ** *** ****** ***** * ** *** * * ** * * * consensus_9865#0 CACCGCTCCCGGA---AGTTGGTCGCTGCGTTGCTTGGCTCCATTGCCCTGTGCGTTACA 234 consensus_9865#2 CACCGCTCCCGGA---AGTTGGTCGCTGCGTTGCTTGGCTCCATTTCCCTGTGCGTTACA 152 consensus_9865#1 CAGCGAGCTCAAACCAAGCTAAGCGCAACCGCATAGTAGGCTGTAAAACGGTGTAATACA 169 ** ** * * * ** * *** * * * * *** **** consensus_9865#0 ACGAAGTCGTCGTCGCCGTGCGTGAGTGTGACTG--ACCACCGCT---GTTTTGTGAGAG 289 consensus_9865#2 ACGAAGTCGTC---GCCGTGCGTGAGTGTGACTTGTACCACCGCT---GTTTTGTGAGAG 206 consensus_9865#1 GCAGA-CAGCATAGGACATACACACACACATACAGACACGCGTTTCAAGTATTGTTAAAG 228 * * * * * * * * * * ** **** * ** consensus_9865#0 TTGTTTT-TGGCGTATTCTACTCGTTGTGAAAATAGAA-AATGACCCGTGGAAACCAGCG 347 consensus_9865#2 TTGTTTT-TGGCGTATTCTACTCGTTGTGAAAATAGAACAATGACCCGTGGAAACCAGCG 265 consensus_9865#1 TTAAAACATGAAAGGATCGATTTGTGGGAGGGGTAGCCTAA--ACACCTAGCGTCTACTG 286 ** ** ** * * ** * *** ** ** * * * * * * consensus_9865#0 CGA--ATTGGCCCGTGCGAAGAACCAGAA-AAAGAATGCCGGCCAGCCAAAGC----AGC 400 consensus_9865#2 CGAC-ATTGGGCCGTGCGAAGAACCAGAACAAAGAATGCCGGCCAGC-AAAGC----AGC 319 consensus_9865#1 TGGTCGGTGTAGTGGTAGCAGTGCTAGAACAGGACACGC-GGTTAGCAATAGCGCACAGT 345 * ** * * ** * **** * * ** ** *** * *** ** consensus_9865#0 GGGACGATGGTCTCACACACGAG-CAGAGGAAGCAGCGTGACGCTGACATCATGCGACAA 459 consensus_9865#2 GGGACGATGGTCTAACGCACGAGGCAGAGGAAGCAGCGTGACGCTGACATCATGCGACAA 379 consensus_9865#1 CAGATTTAAAGCAAAAACATAAAACACAT-AAACAATGGGGC-CGGGAGGAGTACAATTG 403 ** * * ** * ** * ** ** * * * * * * * * consensus_9865#0 AAGCAGTTGAAAAAGGAGCA-AGATGCAAAGCA---TGCGATCAAGAGTTAATGTCCGTT 515 consensus_9865#2 AAGCAGTTGAACANGGAGCACAGATGCAAAGCA---TGCGATCAAGAGTTAATGTCCGTT 436 consensus_9865#1 AATGCTTTTTCCTATGTTGACGCGTGCTCTGCGAAGTGCGAA-AGGAGCATGGAGCCATA 462 ** ** * * *** ** ***** * *** ** * consensus_9865#0 CCGGA----CACGATCGCCCACCACAAACCACCACCACCAAGCGCCAAACAAACGCATCC 571 consensus_9865#2 CCGGA----CACGATCGCC-ACCACAAAC-ACA--CACCAAGCGC-AAACAAACGCATTC 487 consensus_9865#1 CAAAAGCGTCACAGCGACTGGATTTAGAACATG-TTTGTATGGATAATTTAAATGTGAAG 521 * * *** * * * * * * * *** * consensus_9865#0 TCTAT-CCCTCATTTCTTCGTG--CAAAACCAATCG-C-GAAAAC-CATAGGCCAAAACC 625 consensus_9865#2 TCTGTACCCTCATTTCTTCGTG--TAAAACCAATCG-CCGAAAAC-CATAGGCCAAAACC 543 consensus_9865#1 CTTGTTTTGGTATAGGTTCACACTTATCGTCCATCGATTGTGTACGTGTTTAGTGTAACT 581 * * ** *** * * **** * ** * *** consensus_9865#0 GATCGCACCGACAACAACA-ACAACACTCT---AACTGAC-ACCG-----CGGTGTGCTG 675 consensus_9865#2 GATCGCGACAACGA--ACA-ACNACACTCTT--AACTGACCACCGGAAANCGGTGTGCTG 598 consensus_9865#1 GCAGGCTACAAACTCTACATACAACCTTTCCGTGTCTGCATGACAGAGTTTTGTGTCTTA 641 * ** * * *** ** ** * *** * **** * consensus_9865#0 CATC--GTGCGCTC-GGGTATATT---CAGCTAAATTGAAAGGTTAT-TA-TAAATCGCA 727 consensus_9865#2 CATCTGGTGCGCTCCGGGTATATN---CAGCTAAATTGNAAGGTCAT-TNATAAATTGCA 654 consensus_9865#1 TAGATGCTACTCCAGAAACAGAGCGAACAACTCAATTGAAAGATGTTGTGCTTGAGCGTT 701 * * * * * * ** ** ***** *** * * * * * * consensus_9865#0 TCTTGCAAATTCAATTCCCGTTTGCTTTTGGGGCTGCGTTGGCTTTTGATTCGCCTCTTC 787 consensus_9865#2 TCT--------------------------------------------------------- 657 consensus_9865#1 TAAACACAGGTCAATAATTTTCTTATTTTGTGTTTTGAGTTTGCTTTATCAAAAGTAATA 761 * consensus_9865#0 TTCGTCTCGACACTGTGTGCAAGATGGCCATTGTTTTTCTCACTGAAACCACCCGCACAC 847 consensus_9865#2 ------------------------------------------------------------ consensus_9865#1 TCCATTCAATAGAAAATTTGTGGAGCGTATGAGCGTGTGACATGAGTGCGATTTTGATGC 821 consensus_9865#0 ACACTGAGAAAAGGGTTCTCGGGTGTGTGTGTGCACCACACCACCACACACCACAGGGCA 907 consensus_9865#2 ------------------------------------------------------------ consensus_9865#1 TGCAAATGGAGCGCGTTTTATAGGGAATGATCGATGACTGATGAAGTAAGGGTAGAGAGA 881 consensus_9865#0 TTTCCCTTTATGTTTTCAGGCTTTACTTTTATACTATTTAGTGTGTAAGCGTGTGGGATG 967 consensus_9865#2 ------------------------------------------------------------ consensus_9865#1 AAATGCGTGCAAAATACGATAGGAGGTTCATTTTTATACTTTTTTTTTTGCTACTGTGCT 941 consensus_9865#0 ATTCAAAAAAAGGCCCACAGTCCAAACAGCAAAACCACCTCCCGATTAAAAGCAATAGCA 1027 consensus_9865#2 ------------------------------------------------------------ consensus_9865#1 ATTTTTTAAAATAATAATTATACTTAATTAAAACAAAATCTACTGCTCCCCAAGCAAGCA 1001 consensus_9865#0 ACTGCAACTGCAAACTCAGCGAGCTCAAACCAAGCTAAGCGCAACCGCATAGTAGGCTGT 1087 consensus_9865#2 ------------------------------------------------------------ consensus_9865#1 AAAGAATGTTACAAAAAAAACCGACGGCGCGCATACTACTAAGCTAGCACTATACGTATG 1061 consensus_9865#0 AAAACGGTGTAAAACAGCAGACAGCATAGGACATACACACACACATACAGACACGCGTTT 1147 consensus_9865#2 ------------------------------------------------------------ consensus_9865#1 CGCTATGCGTTGGGATGATTAATTACCCCTTTCTCTCCTCCTCCCCACTATTTCCCATCC 1121 consensus_9865#0 CAAGTATTGTTAAAGTTATACATGAAAGGATCGGTTGTGGGGGGTAGCCTAAACACCTAG 1207 consensus_9865#2 ------------------------------------------------------------ consensus_9865#1 CCCCAATCGTAGCTGTTGTATAGAAGATCGTAAAGTAAATAGAATTAAACGCAAATAAAA 1181 consensus_9865#0 CGTCTACTGTGGTCGGTGTAGTGGGTAGTAGTACTAGGACAGGACACGCGGTTTAGCAAT 1267 consensus_9865#2 ------------------------------------------------------------ consensus_9865#1 CCACCATGAAT------------------------------------------------- 1192 consensus_9865#0 AGCGCACATTCAAATTTAAAGCAAAACATAAAACACATAAACAATGGGGCCGAGAGGAGT 1327 consensus_9865#2 ------------------------------------------------------------ consensus_9865#1 ------------------------------------------------------------ consensus_9865#0 ACAATTGATTGCTTTTTCCTACTATATGTTGACGCGTGCTCTGCGAAGTGCGAAAGGAGC 1387 consensus_9865#2 ------------------------------------------------------------ consensus_9865#1 ------------------------------------------------------------ consensus_9865#0 ATGGAGCCATACAAAAGCGTCACAGCGGTTGGATTAGGAACATGTTTGTATGGATAATTG 1447 consensus_9865#2 ------------------------------------------------------------ consensus_9865#1 ------------------------------------------------------------ consensus_9865#0 AAATGTGAAGCTTGTTTTTGTATAGATTCACGATTA 1483 consensus_9865#2 ------------------------------------ consensus_9865#1 ------------------------------------ |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||