These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9868#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 953 fasta sequence [CAGAATCCCCCGAGGTTNTTAGTGACTACTTTTATCTAGATGTTGAAATAAAACTCGCTGAAGAGCCGAACCAATTGTCCGCACTTTACCTGAAGGGCAGCATAGAACGATCGCTGACGAAAGTGTTCGGCGAAATCGGTGGCCAAACTGAGGTTGATCTGCTGAAATTTGACCCACAGCGAAAGCGTATTATCCTGCGCGTGCCGAA-AGAATTCTACGTGAAGCTCCGCGCTGCCATAACGCTGATCGGAGAGTTCCAAGGAGTGCCCTGCAACTTCCAGGTAAAGAAGGCATCGCCCCTGCTGCTCTCGTTGGTGGAAACGCACGTAGA-CTTTGCCGGTCAAACCGTTGCTTG-AATCATGTCGCTGTGCAAAAGCTAC-GGCAAGGATAAGGTAATCTTTGCCACCGCCGAGGACCATGCCACGCCGAGCAAGGTGGAGCTACCGGAATCGGAACCGCGACCGGGACTGATACTGGAAAATGGAGACATCAACTGGAACTGTCCATGCCTCGGTGGCATGGCGATCGGTCCGTGCGGTAACGAGTNCCGGGAAGCATTCTCTTGCTTTCACTACAAGGCAAGCACAGCCGAAGGGTTCGGATTGNTACGAAGCGTTCAGCACCAATGAACGAATGCATGCGTAAACTATACCTGGGTGTGTTACACAACAAAACCTCAAACGAGGGACCGAGGAATGAGGAGAGTGGTGCCGGTGGTGGACGAGCNNATGATAAGCGNNACGAAAGGCGAGCAGGANGATGANTGTCCCAATGCGCCATCCTACAGGGGAAACGGCGGACAANAGCAGAACTTCAAAAAACTNGTAAGACTGAACAAANANGCGAACCTNAAGGTCGTACTTAAGGCGGAACCAACAATTAAATATAACGCCAGANGAGTACGTAGTNACCAGGTGTGCAAAAACACACAAAAACAAAAAAACAAGGGGTTG] [+] EMBL AL693853 [CAGAATCCCCCGAGGTTNTTAGTGACTACTTTTATCTAGATGTTGAAATAAAACTCGCTGAAGAGCCGAACCAATTGTCCGCACTTTACCTGAAGGGCAGCATAGAACGATCGCTGACGAAAGTGTTCGGCGAAATCGGTGGCCAAACTGAGGTTGATCTGCTGAAATTTGACCCACAGCGAAAGCGTATTATCCTGCGCGTGCCGAAGAGAATTCTACGTGAAGCTCCGCGCTGCCATAACGCTGATCGGAGAGTTCCAAGGAGTGCCCTGCAACTTCCAGGTAAAGAAGGCATCGCCCCTG TGCTCTCGTTGGTGGAAACGCACGTAGACCTTTGCCGGTCAAACCGTTGCTTGAAATCATGTCGCTGTGCAAAAGCTACGGGCAAGGATAGGGTAATCTTTG CACCGCCGAGGACCATGCCACGCCGAGCAAGGTGGAGCTACCGGAATCGGAACCG GA CGGCACTGATACTGGAAAATGGAGACATCCAATGGAACTGTCCATGCCTCGGTGGCATGGCGATCGGTCCGTGCGGTAACGAGTNCCGGGAAGCATTCTCTTGCTTTCACTACAAGGCAAGCACAGCCGAAGGGTTCGGATTGNTACGAAGCGTTCAGCACCAATGAACGAATGCATGCGTAAACTATACCTGGGTGTGTTACACAACAAAACCTCAAACGAGGGACCGAGGAATGAGGAGAGTGGTGCCGGTGGTGGACGAGCNNATGATAAGCGNNACGAAAGGCGAGCAGGANGATGANTGTCCCAATGCGCCATCCTACAGGGGAAACGGCGGACAANAGCAGAACTTCAAAAAACTNGTAAGACTGAACAAANANGCGAACCTNAAGGTCGTACTTAAGGCGGAACCAACAATTAAATATAACGCCAGANGAGTACGTAGTNACCAGGTGTGCAAAAACACACAAAAACAAAAAAACAAGGGGTTG] [+] EMBL BM619056 [ ccgCTTTTATCTAGATGTTGAAATAAAACTCGCTGAAGAGCCGAACCAATTGTCCGCACTATACCTGAAGGGCAGCATAGAACGATCGCTGACGAAAGTGTTCGGCGAAATCGGTGGCCAAACTGAGGTGGATTTGCTGAAATTTGACGCACAGCGAAAGCGTATTATCCTGCGCGTGCCGAA AGAATTCTACGTGAAGCTCCGCGCTGCCATAACGCTGATCGGAGAGTTCCAAGGAGTGCCCTGCAACTTCCAGGTAAAGAAGGCATCGCCCCTGCTGCTCTCGTTGGTGGAAACGCACGTAGA CTTTGCCGGTCAAACCGTTGCTTG AATCATGTCGCTGTGCAAAAGCTAC GGCAAGGATAAGGTAATCTTTGCCACCGCCGAGGACCATGCCACGCCGAGCAAGGTGGAGCTACCGGAATCGGAACCGCGACCGGGACTGATACTGGAAAATGGAGACATCAACTGGAACTGTCCATGCCTCGGTGGCATGGCGATCGGTCC ] [+] EMBL BX622775 [ GTCCGCACTTTACCTGAAGGGCAGCATAGAACGATCGCTGACGAAAGTGTTCGGCGAAATCGGTGGCCAAACTGAGGTTGATCTGCTGAAATTTGACCCACAGCGAAAGCGTATTATCCTGCGCGTGCCGAA AGAATTCTACGTGAAGCTCCGCGCTGCCATAACGCTGATCGGAGAGTTCCAAGGAGTGCCCTGCAACTTCCAGGTAAAGAAGGCATCGCCCCTGCTGCTCTCGTTGGTGGAAACGCACGTAGA CTTTGCCGGTCAAACCGTTGCTTG AATCATGTCGCTGTGCAAAAGCTAC GGCAAGGATAAGGTAATCTTTGCCACCGCCGAGGACCATGCCACGCCGAGCAAGGTGGAGCTACCGGAATCGGAACCGCGACCGGGACTGATACTGGAAAATGGAGACATCAACTGGAACTGTCCATGCCTCGGTGGCATGGCGATCGGTCCGTGCGGTAACGAGTTCCGGGAAGCATTCTCTTGCTTTCACTAC AGCCAAGCACAGCCGAAGGGTTCGGATTGCTACGAAGCGTTCAGCA CAATGAACGAATGCATGCGT AACTAT CCT GGTGT ] consensusID : consensus_9868#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 948 fasta sequence [CACAACATACAAAACATAC-TGGATAACAAAAAAAAACGCATTATTT-TCTCGCCGCTCAAGCATGGTTCTACTATGAGTGACTACTTTTATCTAGATGTTGAAATAAAACTCGCTGAAGAGCCGAACCAATTGTCCGCACTATACCTGAAGGGCAGCATAGAGCGATCGCTGACGAAAGTGTTCGGCGAAATCGGTGGCCAAACTGAGGTTGATCTGCTGAAATTTGACGCACAGCGAAAGCGTGATTATCCTGCGCGTGCCGAAAG-AATTCTACGTGAAGCTCCGCGCTGCCATAACGCTGATCGGAGAGTTCCAAGGAGTGCCCTGCAACTTCCAGGTAAAGAAGGCATCGCCCCTGCTGCTCTCGTTGGTGGAAACGCACGTAGACTTTGCCGGTCAAACCGTCGCTTGAATCATGTCGCTGTGCAAAAGCTACGGCAAGGATAAGGTGATTTTTGCTACCG-CCGAGGATCATGCCATGCCGAGCAAGGTGGAGCTACCGGAATCGGAACCGCGACCGGGACTGATACTGGAAAATGGAGACATCAACTGGAACTGTCCATGCCTCGGTGGCATGGCGATCGGTCCGTGCGGTAACGAGTTCCGGGAAGCATTCTCTTGCTTCCACTACAGCCAAGCACAGCCGAAGG-TTCGGATTGCTACGAAGCGTTCAGCACAATGAACGAATGCATGCGGAACTATCCTGGTGTGTACAAACAAAACCTCAACGAGGACGAGGATGAGGAGAGTGGTGCCGGTGTGGCGAGCATGATAGCCGACGAAGGCGAGGGAAGAGGATGATGTCGATGCGCCTCCTCCGGCAAAGGCGGAAAGCGAATTAAAAACCGTGGCGACAAAAGCGAACTAAGTTGTATAAGCGAGCAAACAATAATATACGCCAGAAAGTAGTGTTACAGCTGTTTAAAAAAAAAAAAAAAAGGCCACATG] [+] EMBL CNS097GH [CACAACATACAAAACATGCTTTTATAACAAAAAAAAACGCATTATTT TCTCGCCGCTCAAGCATGGTTCTACTATGAGTGACTACTTTTATCTAGATGTTGAAATAAAACTCGCTGAAGAGCCGAACCAATTGTCCGCACTATACCTGAAGGGCAGCATAGAACGATCGCTGACGAAAGTGTTCGGCGAAATCGGTGGCCAAACTGAGGTGGATTTGCTGAAATTTGACGCACAGCGAAAGCGTTATTATCCTGCGCGTGCCGAAAG AATTCTACGTGAAGCTCCGCGCTGCCATAACGCTGATCGGAGAGTTCCAAGGAGTGCCCTGCAACTTCCAGGTAAAGAAGGCATCGCCCCTGCTGCTCTCGTTGGTGGAAACGCACGTAGACTTTGCCGGTCAAACCGTTGCTTGAATCATGTCGCTGTGCAAAAGCTACGGCAAGGATAAGGTAATCTTTGCCACCG CCGAGGACCATGCCACGCCGAGCAAGGTGGAGCTACCGGAATCGGAACCGCGACCGGGACTGATACTGGAAAATGGAGACATCAACTGGAACTGTCCATGCCTCGGTGGCATGGCGATCGGTCCGTGCGGTAACGAGTTCCGGGAAGCATTCTCCTGCTTCCACTACAGCCAAGCACATCCGAAGG TTCGGATTGCTACGAAGCGTTCAGCACAATGAACGAATGCATGCGGAACTATCCTGGTGTGTACAAACAAAACCTCAACGAGGACGAGGATGAGGAGAGTGGTGCCGGTGTGGCGAGTATGATAGCCGACGAAGGCGAGGGAGGAGGATGATGTCGATGCGCCTCCTCCGGCAAAGGCGGAAAGCGAATTAAAAACCGTGGCGACAAAAGCGAACTAAGTTGTATAAGCGAGCAAACAATAATATACGCCAGAAAGTAGTGTTACAGCTGTTTAAAAAAAAAAAAAAAAGGCCACATG] [+] EMBL CNS09PD4 [ cTAC TGGATAACAAAAAAAAACGCATTATTT TCTCGCCGCTCAAGCATGGTTCTACTATGAGTGACTACTTTTATCTAGATGTTGAAATAAAACTCGCTGAAGAGCCGAACCAATTGTCCGCACTATACCTGAAGGGCAGCATAGAGCGATCGCTGACGAAAGTGTTCGGCGAAATCGGTGGCCAAACTGAGGTTGATCTGCTGAAATTTGACGCACAGCGAAAGCGTGATTATCCTGCGCGTGCCGAAAG AATTCTACGTGAAGCTCCGCGCTGCCATAACGCTGATCGGAGAGTTCCAAGGAGTGCCCTGCAACTTCCAGGTAAAGAAGGCATCGCCCCTGCTGCTCTCGTTGGTGGAAACGCACGTAGACTTTGCCGGTCAAACCGTCGCTTGAATCATGTCGCTGTGCAAAAGCTACGGCAAGGATAAGGTGATTTTTGCTACCGCCCGAGGATCATGCCATGCCGAGCAAGGTGGAGCTACCGGAATCGGAACCGCGACCGGGACTGATACTGGAAAATGGAGACATCAACTGGAACTGTCCATGCCTCGGTGGCATGGCGATCGGTCCGTGCGGTAACGAGTTCCGGGAAGCATTCTCTTGCTTCCACTACAGCCAAGCACAGCCGAAGGTTTCGGATTGCTACGAAGCGTTCAGCACAATGAACGAATGCATGCGGAACTATCCTGGTGTGTACAAACAAAACCTCAA ] [+] EMBL CNS09E1B [ AC TGGATAA AAAAAAAAACGCATTATTT TCTCGCCGCTCAAGCATGGTTCTACTATGAGTGACTACTTTTATCTAGATGTTGAAATAAAACTCGCTGAAGAGCCGAACCAATTGTCCGCACTATACCTGAAGGGCAGCATAGAACGATCGCTGACGAAAGTGTTCGGCGAAATCGGTGGCCAAACTGAGGTGGATTTGCTGAAATTTGACGCACAGCGAAAGCGTTATTATCCTGCGCGTGCCGAAAG AATTCTACGTGAAGCTCCGCGCTGCCATAACGCTGATCGGAGAGTTCCAAGGAGTGCCCTGCAACTTCCAGGTAAAGAAGGCATCGCCCCTGCTGCTCTCGTTGGTGGAAACGCACGTAGACTTTTCCGGTCAA CGTTGCTTGAATCATGTCGCTGTGCAAAAACTACGGCAAGGATAAGG ] [+] EMBL CNS0936I [ gATTATTTATCTCGCCGCTCAAGCATGGTTCTACTATGAGTGACTACTTTTATCTAGATGTTGAAATAAAACTCGCTGAAGAGCCGAACCAATTGTCCGCACTATACCTGAAGGGCAGCATAGAGCGATCGCTGACGAAAGTGTTCGGCGAAATCGGTGGCCAAACTGAGGTTGATCTGCTGAAATTTGACGCACAGCGAAAGCGTGATTATCCTGCGCGTGCCGAAAG AATTCTACGTGAAGCTCCGCGCTGCCATAACGCTGATCGGAGAGTTCCAAGGAGTGCCCTGCAACTTCCAGGTAAAGAAGGCATCGCCCCTGCTGCTCTCGTTGGTGGAAACGCACGTAGACTTTGCCGGTCAAACCGTCGCTTGAATCATGTCGCTGTGCAAAAGCTACGGCAAGGATAAGGTGATTTTTGCTACCG CCGAGGATCATGCCATGCCGAGCAAGGTGGAGCTACCGGAATCGGAACCGCGACCGGGACTGATACTGGAAAATGGAGACATCAACTGGAACTGTCCATGCCTCGGTGGCATGGCGATCGGTCCGTGCGGTAACGAGTTCCGGGAAGCATTCTCTTGCTTCCACTACAGCCAAGCACAGCCGAAGG TTCGGATTGCTACGAAGCGTTCAGCACAATGAACGAATGCATGCGGAACTATCCTGGTGTGTACAAACAAAACCTCAACGAGGACGAGGATGAGGAGAGTGGTGCCGGTGTGGCGAGCATGATAGCCGACGAAGGCGAGGGAAGAGGATGATGTCGATGCGCCTCCTCCGGCAAAGGCGGAAAGCGAATCAAAAACTGTAGCGACAAAAGCGAACTAAGTTGTATAAGCGAACAAACAATAATATACGCGAGAGAGTA ] [+] EMBL CNS09PXW [ GCTCAAGCATGGTTCTACTATGAGTGACTACTTTTATCTAGATGTTGAAATAAAACTCGCTGAAGAGCCGAACCAATTGTCCGCAC ] [+] EMBL CNS09625 [ CAAGCATGGTTCTACTATGAGTGACTACTTTTATCTAGATGTTGAAATAAAACTCGCTGAAGAGCCGAACCAATTGTCCGCACTATACCTGAAGGGCAGCATAGAGCGATCGCTGACGAAAGTGTTCGGCGAAATCGGTGGCCAAACTGAGGTTGATCTGCTGAAATTTGACGCACAGCGAAAGCGTGATTATCCTGCGCGTGCCGAAAGAAATTCTACGTGAAGCTCCGCGCTGCCATAACGCTGATCGGAGAGTTCCAAGGAGTGCCCTGCAACTTCCAGGTAAAGAAGGCATCGCCCCTGCTGCTCTCGTTGGTGGAAACGCACGTAGACTTTGCCGGTCAAACCGTCGCTTGAATCATGTCGCTGTGCAAAAGCTACGGCAAGGATAAGGTGATTTTTGCTACCG CCGAGGATCATGCCATGCCGAGCAAGGTGGAGCTACCGGAATCGGAACCGCGACCGGGACTGATACTGGAAAATGGAGACATCAACTGGAACTGTCCATGCCTCGGTGGCATGGCGATCGGTCCGTGCGGTAACGAGTTCCGGGAAGCATTCTCTTGCTTCCACTACAGCCAAGCACAGCCGAAGG TTCGGATTGCTACGAAGCGTTCAGCACAATGAACGAATGCATGCGGAACTATCCTGGTGTGTACAAACAAAACCTCAACGAGAACGAGGATGAGGAGAGTGGTGCAGATGTAACGAGCATGATAGCCGACAAAGGCGA GGCAGAGGATGCTGTCGATACGCCT ] [-] EMBL CNS09626 [ GCTACCGGAATCGGAACCCCGACCGGGACTGATACTGGAAAATGGAGACATCAACTGGGACTGTCCATGCCTCGGTGGCATGGCGATCGGTCCGTGCGGTAACGAGTTCCGGGAAGCATTTTCTTGCTTCCAC ] consensusID : consensus_9868#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 915 fasta sequence [GGCTCAGGCAAGAA-CGCTCAAGCAT-GGTT-CTACTATGAGTGACTACTTTTATCTAGATGTTGAAATAAAACTCGCTGAAGAGCCGAACCAATTGTCCGCACTATACCTGAAGGGCAGCATAGAGCGATCGCTGACGAAAGTGTTCGGCGAAATCGGTGGCCAAACTGAGGTTGATCTGCTGAAATTTGACGCACAGCGAAAGCG-TATTATCCTGCGCGTGCCGAAAGAATTCTACGTGAAGCTCCGCGCTGCCATAACGCTGATCGGAGAGTTCCAAGGAGTGCCCTGCAACTTCCAGGTAAAGAAGGCATCGCCCCTGCTGCTCTCGTTGGTGGAAACGCACGTAGACTTTGCCGGTCAAACCGTCGCTTGAATCATGTCGCTGTGTAAAAGCTAC-GGCAAGGATAAGGTGATTTTTGCTACCGCC-GAGGATCATGCCACGCCGAGCAAGGTGGAGCTACCGGAATCGGAACCGCGACCGGGACTGATACTGGAAAATGGAGACATCAACTGGAACTGTCCATGCCTCGGTGGCATGGCGATCGGTCCGTGCGGTAACGAGTTCCGGGAAGCATTCTCTTGCTTCCACTACAGCCAAGCACAACCG-AAGGGTTCGGATTGCTACGAAGCGTTCAGCACAATGAACGAATGCATGCGGAACTATCCTGGCGTGTACAAACAAAACCTCAACGAGGACGAGGATGAGGAGAGTGGTGCCGGTGTGGCGAGCATGATAGCCGACGAAGGCGAG-GAAGAGGATGATGTCGATGCGCCTCCTCCGGCAAAGGCGGAAAGCGAATCAAAAACTGTAGCGACAAAAGCGAACTAAGTTGTATAAGCGAACAAACAATAATATACGCCAGAGAGTAGTGTTA-CAGCTGTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL BX468537 [GGCTCAGGCAAGAATCNGGCACG ATGGGGT CTACTATGAGTGACTACTTTTATCTAGATGTTGAAATAAAACTCGCTGAAGAGCCGAACCAATTGTCCGCACTATACCTGAAGGGCAGCATAGAGCGATCGCTGACGAAAGTGTTCGGCGAAATCGGTGGCCAAACTGAGGTTGATCTGCTGAAATTTGACGCACAGCGAAAGCG TATTATCCTGCGCGTGCCGAAAGAATTCTACGTGAAGCTCCGCGCTGCCATAACGCTGATCGGAGAGTTCCAAGGAGTGCCCTGCAACTTCCAGGTAAAGAAGGCATCGCCCCTGCTGCTCTCGTTGGTGGAAACGCACGTAGACTTTGCCGGTCAAACCGTCGCTTGAATCATGTCGCTGTGTAAAAGCTAC GGCAAGGATAAGGTGATTTTTGCTACCGCC GAGGATCATGCCACGCCGAGCAAGGTGGAGCTACCGGAATCGGAACCGCGACCGGGACTGATACTGGAAAATGGAGACATCAACTGGAACTGTCCATGCCTCGGTGGCATGGCGATCGGTCCGTGCGGTAACGAGTTCCG ] [-] EMBL CNS097GI [ CGCTAAAGCAT GGTT CTACTATGAGTAACTACTTTTATCTAGATGTTGAAATAAAACTCGCTGGAGAGCCGAACCAATTGTCCGCACTATACCTGAAGGGCAGCATAGAACGATGGCTGACGAAAGTGTTCGGCGAAATCGGTGGCCAAACTGAGGTGGATTTGCTGAAATTTTACGCACAGCGAAAGCG TATTATCCTGCGCGTGCCGAAAGAATTCTACGTGAAAGTCCGGGCTGCCATAACGCTGATCGGAGAGTTCCAAGGAGTGCCCTGCAACTTCCAGGTAAAGAAGGCATCGCCCCTGCTGCTCTCGTTGGTGGAAACGCACGTAGACTTTGCCGGTCAAACCGTTGCTTTAATCATGTCGCTGTGCAAAAGCTAC GGCAAGGATAAGGTAATCTTTGCCACCGCC GAGGACCATGCCACGCCGAGCAAGGTGGAGCTACCGGAATCGGAACCGCGACCGGGACTGATACTGGAAAATGGAGACATCAACTGGGACTGTCCATGCCTCGGTGGCATGGCGATCGGTCCGTGCGGTAACGAGTTCCGGGAAGCATTCTCCTGCTTCCACTACAGCCAAGGACATCCG AAGGGTTCGGATTGCTACGAAGCGTTCAGCACAATGAACGAATGCATGCGGAACTATCCTGGTGTGTACAAACAAAACCTCAACGAGGACGAGGATGAGGAGAGTGGTGCCGGTGTGGCGAGTATGATAGCCGACGAAGGCGAG GAGGAGGATGATGTCGATGCGCCTCCTCCGGCAAAGGCGGAAAGCGAATCAAAAACCGTGGCGACAAAAGCGAACTTAGTTGTATAAGCGAGCAAACAATTATATACGCCAGAGAG ] [+] EMBL BX626968 [ tttctcgc CGCTCAAGNNT GGTT CTACTATGAGTGACTACTTTTATCTAGATGTTGAAATAAAACTCGCTGAAGAGCCGAACCAATTGTCCGCACTATACCTGAAGGGCAGCATAGAGCGATCGCTGACGAAAGTGTTCGGCGAAATCGGTGGCCAAACTGAGGTTGATCTGCTGAAATTTGACGCACAGCGAAAGCG TATTATCCTGCGCGTGCCGAAAGAATTCTACGTGAAGCTCCGCGCTGCCATAACGCTGATCGGAGAGTTCCAAGGAGTGCCCTGCAACTTCCAGGTAAAGAAGGCATCGCCCCTGCTGCTCTCGTTGGTGGAAACGCACGTAGACTTTGCCGGTCAAACCGTCGCTTGAATCATGTCGCTGTGTAAAAGCTAC GGCAAGGATAAGGTGATTTTTGCTACCGCC GAGGATCATGCCACGCCGAGCAAGGTGGAGCTACCGGAATCGGAACCGCGACCGGGACTGATACTGGAAAATGGAGACATCAACTGGAACTGTCCATGCCTCGGTGGCATGGCGATCGGTCCGTGCGGTAACGAGTTCCGGGAAGCATTCTCTTGCTTCCACTACAGCCAAGCACAACCG AANGGTTCGGATTGCTACGAAGCGTTCAGCACAATGAACGAATGCATGCGGAACT ] [+] EMBL CNS09AZH [ CAAGCAT GGTTGCTACTATGAGTGACTACTTTTATCTAGATGTTGAAATAAAACTCGCTGAAGAGCCGAACCAATTGTCCGCACTATACCTGAAGGGCAGCATAGAGCGATCGCTGACGAAAGTGTTCGGCGAAATCGGTGGCCAAACTGAGGTTGATCTGCTGAAATTTGACGCACAGCGAAAGCGTTATTATCCTGCGCGTGCCGAAAGAATTCTACGTGAAGCTCCGCGCTGCCATAACGCTGATCGGAGAGTTCCAAGGAGTGCCCTGCAACTTCCAGGTAAAGAAGGCATCGCCCCTGCTGCTCTCGTTGGTGGAAACGCACGTAGACTTTGCCGGTCAAACCGTCGCTTGAATCATGTCGCTGTGTAAAAGCTAC GGCAAGGATAAGGTGATTTTTGCTACCGCCGGAGGATCATGCCACGCCGAGCAAGGTGGAGCTACCGGAATCGGAACCGCGACCGGGACTGATACTGGAAAATGGAGACATCAACTGGAACTGTCCATGCCTCGGTGGCATGGCGATCGGTCCGTGCGGTAACGAGTTCCGGGAAGCATTCTCTTGCTTCCACTACAGCCAAGCACAACCG AAGGTATCGGATTGCTACGAAGCGTTCAGCACAATGAACGAATGCATGCGGAACTATCCTGGCGTGTACAAACAAAACCTCAACGAGGACGAGGATGAGGAGAGTGGTGCCGGTGTGGCGAGCATGATAGCCGACGAAGGCGAGAGAAGAGGATGATGTCGATGCGCCTCCTCCGGCAAAGGCGGAAAGCGAATCAAAAACTGTAGCGACAAAAGCGAACTAAGTTGTATAAGCGAACAAACAATAATATACGCCAGAAAGTAGTGTTA CAGCTGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL BX619992 [ AGTGACTACTTTTATCTAGATGTTGAAATAAAACTCGCTGAAGAGCCGAACCAATTGTCCGCACTATACCTGAAGGGCAGCATAGAGCGATCGCTGACGAAAGTGTTCGGCGAAATCGGTGGCCAAACTGAGGTTGATCTGCTGAAATTTGACGCACAGCGAAAGCG TATTATCCTGCGCGTGCCGAAAGAATTCTACGTGAAGCTCCGCGCTGCCATAACGCTGATCGGAGAGTTCCAAGGAGTGCCCTGCAACTTCCAGGTAAAGAAGGCATCGCCCCTGCTGCTCTCGTTGGTGGAAACGCACGTAGACTTTGCCGGTCAAACCGTCGCTTGAATCATGTCGCTGTGTAAAAGCTAC GGCAAGGATAAGGTGATTTTTGCTACCGCC GAGGATCATGCCACGCCGAGCAAGGTGGAGCTACCGGAATCGGAACCGCGACCGGGACTGATACTGGAAAATGGAGACATCAACTGGAACTGTCCATGCCTCGGTGGCATGGCGATCGGTCCGTGCGGTAACGAGTTCCGGGAAGCATTCTCTTGCTTCCACTACAGCCAAGCACAACCG AAGGGTTCGGATTGCTACGAAGCGTTCAGCACAATGAACGAATGCATGCGGAACTATCCTGGCGTGTACAAACAAAACCTCAACGAGGACCANGATGANGAGAGTGGTGCCGGTGTGGCGAGCAT ] [+] EMBL BM636552 [ ccgCTTTTATCTAGATGTTGAAATAAAACTCGCTGAAGAGCCGAACCAATTGTCCGCACTATACCTGAAGGGCAGCATAGAGCGATCGCTGACGAAAGTGTTCGGCGAAATCGGTGGCCAAACTGAGGTTGATCTGCTGAAATTTGACGCACAGCGAAAGCG TATTATCCTGCGCGTGCCGAAAGAATTCTACGTGAAGCTCCGCGCTGCCATAACGCTGATCGGAGAGTTCCAAGGAGTGCCCTGCAACTTCCAGGTAAAGAAGGCATCGCCCCTGCTGCTCTCGTTGGTGGAAACGCACGTAGACTTTGCCGGTCAAACCGTCGCTTGAATCATGTCGCTGTGTAAAAGCTAC GGCAAGGATAAGGTGATTTTTGCTACCGCC GAGGATCATGCCACGCCGAGCAAGGTGGAGCTACCGGAATCGGAACCGCGACCGGGACTGATACTGGAAAATGGAGACATCAACTGGAACTGTCCATGCCTCGGTGGCATGGCGATCGGTCCGTGCGGTAACGAGTTCCGGGAAGCATTCTCTTGCTTCCACTACAGCCAAGCACAACCGAAAGGGTTCGGATTGCTACGAAGCGTTCAGCACAATGAACGAATGCATGC ] [+] EMBL BX616195 [ TGAAGAGCCGAACCAATTGTCCGCACTATACCTGAAGGGCAGCATAGAGCGATCGCTGACGAAAGTGTTCGGCGAAATCGGTGGCCAAACTGAGGTTGATCTGCTGAAATTTGACGCACAGCGAAAGCG TATTATCCTGCGCGTGCCGAAAGAATTCTACGTGAAGCTCCGCGCTGCCATAACGCTGATCGGAGAGTTCCAAGGAGTGCCCTGCAACTTCCAGGTAAAGAAGGCATCGCCCCTGCTGCTCTCGTTGGTGGAAACGCACGTAGACTTTGCCGGTCAAACCGTCGCTTGAATCATGTCGCTGTGTAAAAGCTAC GGCAAGGATAAGGTGATTTTTGCTACCGCC GAGGATCATGCCACGCCGAGCAAGGTGGAGCTACCGGAATCGGAACCGCGACCGGGACTGATACTGGAAAATGGAGACATCAACTGGAACTGTCCATGCCTCGGTGGCATGGCGATCGGTCCGTGCGGTAACGAGTTCCGGGAAGCATTCTCTTGCTTCCACTACAGCCAAGCACAACCG AAGGGTTCGGATTGCTACGAAGCGTTCAGCACAATGAACGAATGCATGCGGAACTATCCTGGCGTGTACAAACAAAACCTCA ] [+] EMBL BX612760 [ AGCGATCGCTGACGAAAGTGTTCGGCGAAATCGGTGGCCAAACTGAGGTTGATCTGCTTAAATTTGACGCACAGCGAAAGCG TATTATCCTGCGCGTGCCGAAAGAATTCTACGTGAAGCTCCGCGCTGCCATAACGCTGATCGGAGAGTTCCAAGGAGTGCCCTGCAACTTCCAGGTAAAGAAGGCATCGCCCCTGCTGCTCTCGTTGGTGGAAACGCACGTAGACTTTGCCGGTCAAACCGTCGCTTGAATCATGTCGCTGTGTAAAAGCTAC GGCAAGGATAAGGTGATTTTTGCTACCGCC GAGGATCATGCCACGCCGAGCAAGGTGGAGCTACCGGAATCGGAACCGCGACCGGGACTGATACTGGAAAATGGAGACATCAACTGGAACTGTCCATGCCTCGGTGGCATGGCGATCGGTCCGTGCGGTAACGAGTTCCGGGAAGCATTCTCTTGCTTCCACTACAGCCAAGCACAACCG AAGGGTTCGGATTGCTACGAAGCGTTCAGCACAATGAACGAATGCATGCGGAACTATCCTGGCGTGTACAAACAAAACCTCAACGAGGACGAGGATGAGGAGAGTGGTGCCGGTGTGGCGAGCATGATAGCCGACGAAGGCGAG GAAGAGGATGATGTCGATGCGCCTCCTCCGGCAAAGGCGGAAAGCGAATCAAAAACTGTAGCGACAAAAGCGAACTAAGTTGTATAAGCGAACAAACAATAATATACGCCAGAGAGTAGTGT ] [-] EMBL CNS09PD5 [ TCGGAGAGTTACAAGGAGTGACCTGCAACTTCCAGGTAAAGAAGGCATCGCCCCTGCTGCTCTCGTTGGTGGAAACGCACGTAGACTTTGCCGGTCAAACCGTCGCTTAAATCATGTCGCTGTGCAAAAGCTACGGGCAAGGATAAGGTGATTTTTGCTACCGCC GAGGATCATGCCATGCCGAGCAAGGTGGAGCTACCGGAATCGGAACCGCGACCGGGACTGATACTGGAAAATGGAGACATCAACTGGAACTGTCCATGCCTCGGTGGCATGGCGATCGGTCCGTGCGGTAACGAGTTCCGGGAAGCATTTTCTTGCTTCCACTACAGCCAAGAACAGCCG AAGGGTTCGGATTGCTACGAAGCGTTCAGCACAATGAACGAATGCATGCGGGACTATCCTGGTGTGTACAAACAAAACCTCAACGAGGACGAGGATGAGGAGAGTGGTGCCGTTGTGGCGAGCATTATAGCCGACGAAGGCGAG GAAGAGGATGATGTCGATGCGCCTCCTCCGGCAAAGGCGGAAAGCGAATCAAAAACTGTAGCGACAAAAGCGAACTAAGTTGTATAAGCGAACAAACAATTATATACGCCAGAGAGTAGTGTTATCTACT TGAAAAAAAAAAAAAA ] [-] EMBL CNS0936J [ TCGGAACCGCGACCGGGACTGATACTGGAAAATGGAGACATCAACTGGAACTGTCCATGCCTCGGTGGCATGGCGATCGGTCCGTGCGGTAACGAGTTCCGGGAAGAATTTTCTTGCTTCCACTACAGCCAAGCACAGCCG AAGGGTTCGGATTGCTACGAAGCGTTCAGCACAATGAACGAATGCATGCGGAACTATCCTGGTGTGTACAAACAAAACCTCAACGAGGACGAGGATGAGGAGAGTGGTGCCGGTGTGGCGAGCATGATAGCCGACGAAGGCGAG GAAGAGGATGATGTCGATGCGCCTCCTCCGGCAAAGGCGGAAAGCGAATCAAAAATTTTAGCGACAAAAGCGAACTAAGTTGTTTAAGCGAACAAACAATAATATACGCCAGAGAGTAGTGTTA CAGCTGTGAGTAAAAAAA ] [-] EMBL CNS09PXX [ TCCGGCAAAGGCGGAAAGCGAATCAAAAACTGTAGCGACAAAAGCGAACTAAGTTGTATAAGCGAACAAACAATAATATACGCCAGAGAGTAGTGTTA C ] consensusID : consensus_9868#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 545 fasta sequence [ATCGCCCCGAGGTTAGTCTACTATGAGTGACTACTTTTATCTAGATGTTGAAATAAAACTCGCTGAAGAGCCGAACCAATTGTCCGCACTATACCTGAAGGGCAGCATAGAACGATCGCTGACGAAAGTGTTCGGCGAAATCGGTGGCCAAACTGAGGTGGATTTGCTGAAATTTGACGCACAGCGAAAGCGTATTATCCTGCGCGTGCCGAAAGAATTCTACGTGAAGCTCCGCGCTGCAACTTCCAGGTAAAGAAGGCATCGCCCCTGCTGCTCTCGTTGGTGGAAACGCACGTAGACTTTGCCGGTCAAACCGTTGCTTGAATCATGTCGCTGTGCAAAAGCTACGGCAAGGATAAGGTAATCTTTGCCACCGCCGAGGACCATGCCACGCCGAGCAAGGTGGAGCTACCGGAATCGGAACCGCGACCGGGACTGATACTGGAAAATGGAGACATCAACTGGAACTGTCCATGCCTCGGTGGCATGGCGATCGGTCCGTGCGGTAACGAGTTCCGGGAAGCATTCTCCTGCTTCCACTACAG] [+] EMBL AL933674 [ATCGCCCCGAGGTTAGTCTACTATGAGTGACTACTTTTATCTAGATGTTGAAATAAAACTCGCTGAAGAGCCGAACCAATTGTCCGCACTATACCTGAAGGGCAGCATAGAACGATCGCTGACGAAAGTGTTCGGCGAAATCGGTGGCCAAACTGAGGTGGATTTGCTGAAATTTGACGCACAGCGAAAGCGTATTATCCTGCGCGTGCCGAAAGAATTCTACGTGAAGCTCCGCGCTGCAACTTCCAGGTAAAGAAGGCATCGCCCCTGCTGCTCTCGTTGGTGGAAACGCACGTAGACTTTGCCGGTCAAACCGTTGCTTGAATCATGTCGCTGTGCAAAAGCTACGGCAAGGATAAGGTAATCTTTGCCACCGCCGAGGACCATGCCACGCCGAGCAAGGTGGAGCTACCGGAATCGGAACCGCGACCGGGACTGATACTGGAAAATGGAGACATCAACTGGAACTGTCCATGCCTCGGTGGCATGGCGATCGGTCCGTGCGGTAACGAGTTCCGGGAAGCATTCTCCTGCTTCCACTACAG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9868#0 ----------------------------------------------CAGAATCCCCCGAG 14 consensus_9868#3 -------------------------------------------------ATCGCCCCGAG 11 consensus_9868#1 CACAACATACAAAACATACTGGATAACAAAAAAAAACGCATTATTTTCTCGCCGCTCAAG 60 consensus_9868#2 --------------------------------------GGCTCAGGCAAGAACGCTCAAG 22 * * ** consensus_9868#0 -GTTNTT--------AGTGACTACTTTTATCTAGATGTTGAAATAAAACTCGCTGAAGAG 65 consensus_9868#3 -GTTAGTCTACTATGAGTGACTACTTTTATCTAGATGTTGAAATAAAACTCGCTGAAGAG 70 consensus_9868#1 CATGGTTCTACTATGAGTGACTACTTTTATCTAGATGTTGAAATAAAACTCGCTGAAGAG 120 consensus_9868#2 CATGGTTCTACTATGAGTGACTACTTTTATCTAGATGTTGAAATAAAACTCGCTGAAGAG 82 * * ********************************************* consensus_9868#0 CCGAACCAATTGTCCGCACTTTACCTGAAGGGCAGCATAGAACGATCGCTGACGAAAGTG 125 consensus_9868#3 CCGAACCAATTGTCCGCACTATACCTGAAGGGCAGCATAGAACGATCGCTGACGAAAGTG 130 consensus_9868#1 CCGAACCAATTGTCCGCACTATACCTGAAGGGCAGCATAGAGCGATCGCTGACGAAAGTG 180 consensus_9868#2 CCGAACCAATTGTCCGCACTATACCTGAAGGGCAGCATAGAGCGATCGCTGACGAAAGTG 142 ******************** ******************** ****************** consensus_9868#0 TTCGGCGAAATCGGTGGCCAAACTGAGGTTGATCTGCTGAAATTTGACCCACAGCGAAAG 185 consensus_9868#3 TTCGGCGAAATCGGTGGCCAAACTGAGGTGGATTTGCTGAAATTTGACGCACAGCGAAAG 190 consensus_9868#1 TTCGGCGAAATCGGTGGCCAAACTGAGGTTGATCTGCTGAAATTTGACGCACAGCGAAAG 240 consensus_9868#2 TTCGGCGAAATCGGTGGCCAAACTGAGGTTGATCTGCTGAAATTTGACGCACAGCGAAAG 202 ***************************** *** ************** *********** consensus_9868#0 CGT-ATTATCCTGCGCGTGCCGAAAGAATTCTACGTGAAGCTCCGCGCTGCCATAACGCT 244 consensus_9868#3 CGT-ATTATCCTGCGCGTGCCGAAAGAATTCTACGTGAAGCTCCGCGCTGC--------- 240 consensus_9868#1 CGTGATTATCCTGCGCGTGCCGAAAGAATTCTACGTGAAGCTCCGCGCTGCCATAACGCT 300 consensus_9868#2 CGT-ATTATCCTGCGCGTGCCGAAAGAATTCTACGTGAAGCTCCGCGCTGCCATAACGCT 261 *** *********************************************** consensus_9868#0 GATCGGAGAGTTCCAAGGAGTGCCCTGCAACTTCCAGGTAAAGAAGGCATCGCCCCTGCT 304 consensus_9868#3 ----------------------------AACTTCCAGGTAAAGAAGGCATCGCCCCTGCT 272 consensus_9868#1 GATCGGAGAGTTCCAAGGAGTGCCCTGCAACTTCCAGGTAAAGAAGGCATCGCCCCTGCT 360 consensus_9868#2 GATCGGAGAGTTCCAAGGAGTGCCCTGCAACTTCCAGGTAAAGAAGGCATCGCCCCTGCT 321 ******************************** consensus_9868#0 GCTCTCGTTGGTGGAAACGCACGTAGACTTTGCCGGTCAAACCGTTGCTTGAATCATGTC 364 consensus_9868#3 GCTCTCGTTGGTGGAAACGCACGTAGACTTTGCCGGTCAAACCGTTGCTTGAATCATGTC 332 consensus_9868#1 GCTCTCGTTGGTGGAAACGCACGTAGACTTTGCCGGTCAAACCGTCGCTTGAATCATGTC 420 consensus_9868#2 GCTCTCGTTGGTGGAAACGCACGTAGACTTTGCCGGTCAAACCGTCGCTTGAATCATGTC 381 ********************************************* ************** consensus_9868#0 GCTGTGCAAAAGCTACGGCAAGGATAAGGTAATCTTTGCCACCGCCGAGGACCATGCCAC 424 consensus_9868#3 GCTGTGCAAAAGCTACGGCAAGGATAAGGTAATCTTTGCCACCGCCGAGGACCATGCCAC 392 consensus_9868#1 GCTGTGCAAAAGCTACGGCAAGGATAAGGTGATTTTTGCTACCGCCGAGGATCATGCCAT 480 consensus_9868#2 GCTGTGTAAAAGCTACGGCAAGGATAAGGTGATTTTTGCTACCGCCGAGGATCATGCCAC 441 ****** *********************** ** ***** *********** ******* consensus_9868#0 GCCGAGCAAGGTGGAGCTACCGGAATCGGAACCGCGACCGGGACTGATACTGGAAAATGG 484 consensus_9868#3 GCCGAGCAAGGTGGAGCTACCGGAATCGGAACCGCGACCGGGACTGATACTGGAAAATGG 452 consensus_9868#1 GCCGAGCAAGGTGGAGCTACCGGAATCGGAACCGCGACCGGGACTGATACTGGAAAATGG 540 consensus_9868#2 GCCGAGCAAGGTGGAGCTACCGGAATCGGAACCGCGACCGGGACTGATACTGGAAAATGG 501 ************************************************************ consensus_9868#0 AGACATCAACTGGAACTGTCCATGCCTCGGTGGCATGGCGATCGGTCCGTGCGGTAACGA 544 consensus_9868#3 AGACATCAACTGGAACTGTCCATGCCTCGGTGGCATGGCGATCGGTCCGTGCGGTAACGA 512 consensus_9868#1 AGACATCAACTGGAACTGTCCATGCCTCGGTGGCATGGCGATCGGTCCGTGCGGTAACGA 600 consensus_9868#2 AGACATCAACTGGAACTGTCCATGCCTCGGTGGCATGGCGATCGGTCCGTGCGGTAACGA 561 ************************************************************ consensus_9868#0 GTNCCGGGAAGCATTCTCTTGCTTTCACTACAAGGCAAGCACAGCCGAAGGGTTCGGATT 604 consensus_9868#3 GTTCCGGGAAGCATTCTCCTGCTTCCACTACAG--------------------------- 545 consensus_9868#1 GTTCCGGGAAGCATTCTCTTGCTTCCACTACA-GCCAAGCACAGCCGAAGG-TTCGGATT 658 consensus_9868#2 GTTCCGGGAAGCATTCTCTTGCTTCCACTACA-GCCAAGCACAACCGAAGGGTTCGGATT 620 ** *************** ***** ******* consensus_9868#0 GNTACGAAGCGTTCAGCACCAATGAACGAATGCATGCGTAAACTATACCTGGGTGTGTTA 664 consensus_9868#3 ------------------------------------------------------------ consensus_9868#1 GCTACGAAGCGTTCAGCAC-AATGAACGAATGCATGCG-GAACTAT--CCTGGTGTGT-A 713 consensus_9868#2 GCTACGAAGCGTTCAGCAC-AATGAACGAATGCATGCG-GAACTAT--CCTGGCGTGT-A 675 consensus_9868#0 CACAACAAAACCTCAAACGAGGGACCGAGGAATGAGGAGAGTGGTGCCGGTGGTGGACGA 724 consensus_9868#3 ------------------------------------------------------------ consensus_9868#1 CA-AACAAAACCTCAA-CGAGGA--CGAGGA-TGAGGAGAGTGGTGCCGGTGT--GGCGA 766 consensus_9868#2 CA-AACAAAACCTCAA-CGAGGA--CGAGGA-TGAGGAGAGTGGTGCCGGTGT--GGCGA 728 consensus_9868#0 GCNNATGATAAGCGNNACGAAAGGCGAGCAGGANGATGANTGTCCCAATGCGCCATCCTA 784 consensus_9868#3 ------------------------------------------------------------ consensus_9868#1 GCA--TGATAGCCGACG---AAGGCGAG--GGAAGAGGATGATGTCGATGCGCC-TCCTC 818 consensus_9868#2 GCA--TGATAGCCGACG---AAGGCGAG--G-AAGAGGATGATGTCGATGCGCC-TCCTC 779 consensus_9868#0 CAGGGGAAACGGCGGACAANAGCAGAACTTCAAAAAACTNGTAAGACTGAACAAANANGC 844 consensus_9868#3 ------------------------------------------------------------ consensus_9868#1 C---GGCAAAGGCGGAAAGC----GAATT---AAAAACCGTGGCGAC-------AAAAGC 861 consensus_9868#2 C---GGCAAAGGCGGAAAGC----GAATC---AAAAACTGTAGCGAC-------AAAAGC 822 consensus_9868#0 GAACCTNAAGGTCGTACTTAAGGCGGAACCAACAATTAAATATAACGCCAGANGAGTACG 904 consensus_9868#3 ------------------------------------------------------------ consensus_9868#1 GAACT---AAGTTGTA--TAAG--CGAGCAAACAAT--AATATA-CGCCAGAA-AGTA-G 909 consensus_9868#2 GAACT---AAGTTGTA--TAAG--CGAACAAACAAT--AATATA-CGCCAGAG-AGTA-G 870 consensus_9868#0 TAGTNACCAGGTGTGCAAAAACACACAAAAACAAAAAAACAAGGGGTTG 953 consensus_9868#3 ------------------------------------------------- consensus_9868#1 TGTTA--CAGCTGTTTAAAAAAAAAAAAAAAAGGCCACATG-------- 948 consensus_9868#2 TGTTA--CAGCTGTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA-- 915 |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||