|
These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9920#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 17 consensus length = 786 fasta sequence
[CAAGTTTTAATCTGTTGCGTTGTGTCGATATGATCAGTAAGTCATTATCCG-AGAATAGTGCAGTAGCAGATTCAGCTCTACTATGTGGAATGATTGTGTGAAACTTTTGGCTGTTGTGGGACTCCTTTTCCCATTGTGTATTTTAGTAAATT-GCAACGATTCCGAAGATGTCTCGTTGGAATACGAAACAACTCCAACGTTTGATGTGGTGATAGCGGAGGGGAAAAAACTCAAACTCAAGGTGCATGACTACGGACATCGACCCTTGTGCAATCCAGTATGGTACTTCAATGGTCGGCCGGTTTCAAAGTCGCGTTGCATTCCCAGCTATGGTGAGCTGGTTTGTCCCTCGGTAAAAC-GTGAAGATGCTGGACGATATGATCTATGGGGAGGAGATGGTAGTCGGCATAGTCAGGCGCGTTTGATATTCTCCGCTAATGTGCAAGTCACGAGAGCTGTTGAACGGGATCTGCCGGAGGAACGCATAGCAAAGGTACAAGATGAGCCACCACCATTTTTTGAACGAAAAAATCGTGTAGAGAACGATTGTTTCTGTTCGGGAGTGACCGAACGTTGTCGGATGGCCCTTGATCTGTACCGAATGAGAAAAACATACGATCTGTCAAACTTGACTGCAGTAAGGCTGGGCGGTGAATCATCCGGTGCCAAATATATCCGTATTCCGTTATCAGTTTTGCTT-GGTAACCTGATCACAGCTTACGGAGGCTATATGCGTTTTCCTGTTACTGAAGAATGCTATACTGATCGCAGCAAACCGTGTGTGGT]
[+] EMBL CNS08V6N [CAAGTTTTAATCTGTTGCGTTGTGTCGATATGATCAGTAAGTCATTATACG TGAATAGTGCAGTAGCAGATTCAGCTCTACTATGTGGAATGATTGTGTGAAACTTTTGGCTGTTGTGGGACTCCTTTTCCCATTGTGTATTTTAGTAAATT GCAACGATTCCGAAGATGTCTCGTTGGAATACGAAACAACTCCAACGTTTGATGTGGTGATAGCGGAGGGGAAAAAACTCAAACTCAAGGTGCATGACTACGGACATCGACCCTTGTGCAATCCAGTATGGTACTTCAATGGTCGGCCGGTTTCAAAGTCGCGTTGCATTCCCAGCTATGGTGAGCTGGTTTGTCCCTCGGTAAAAC GTGAAGATGCTGGACGATATGATCTTTGGGGAGGAGATGGTATTCGGCATAGTCAGGCGCGTTTGATATTCTCCGCTAATGTGCAAGTCACGAGAGCTGTTGAACGGGATCTGCCGGAGGAACGCATAGCAAAGGTACAAGATGAGCCACCACCATTTTTTGAACGAAAAAATCGTGTAGAGAACGATTGTTTTTGTTCGGGAGTGACCGAACGTTGTCGGATGGCCCTTGATCTGTACCGAATGAGAAAAACATACGATCTGTCAAACTTCACTGCAGTAAGGCTGGGCGACGAATCAACCGGTGCCAAATATATCCGTATTCCGTTATCAGTTTTGCTT GGTAACCTGATCACAGCTTACGGA ]
[+] EMBL BM614225 [ ccgGTGTCGATATGATCAGTAAGTCATTATACGCAGAATAGTGCAGTAGCAGATTCAGCTCTACTATGTGGAATGATTGTGTGAAACTTTTGGCTGTTGTGGGACTCCTTTTCCCATTGTGTATTTTAGTAAATT GCAACGATTCCGAAGATGTCTCGTTGGAATACGAAACAACTCCAACGTTTGATGTGGTGATAGCGGAGGGGAAAAAACTCAAACTCAAGGTGCATGACTACGGACATCGACCCTTGTGCAATCCAGTATGGTACTTCAATGGTCGGCCGGTTTCAAAGTCGCGTTGCATTCCCAGCTATGGTGAGCTGGTTTGTCCCTCGGTAAAAC GTGAAGATGCTGGACGATATGATCTATGGGGAGGAGATGGTAGTCGGCATAGTCAGGCGCGTTTGATATTCTCCGCTAATGTGCAAGTCACGAGAGCTGTTGAACGGGATCTGCCGGAGGAACGCATAGCAAAGGTACAAGATGAGCCACCACCATTTTTTGAACGAAAAAATCGTGTAGAGAACGATTGTTTCTGTTCGG ]
[+] EMBL BM595798 [ CCGCAGAATAGTGCAGTAGCAGATTCAGCTCTACTATGTGGAATGATTGTGTGAAACTTTTGGCTGTTGTGGGACTCCTTTTCCCATTGTGTATTTTAGTAAATT GCAACGATTCCGAAGATGTCTCGTTGGAATACGAAACAACTCCAACGTTTGATGTGGTGATAGCGGAGGGGAAAAAACTCAAACTCAAGGTGCATGACTACGGACATCGACCCTTGTGCAATCCAGTATGGTACTTCAATGGTCGGCCGGTTTCAAAGTCGCGTTGCATTCCCAGCTATGGTGAGCTGGTTTGTCCCTCGGTAAAAC GTGAAGATGCTGGACGATATGATCTATGGGGAGGAGATGGTAGTCGGCATAGTCAGGCGCGTTTGATATTCTCCGCTAATGTGCAAGTCACGAGAGCTGTTGAACGGGATCTGCCGAAGGAACGCATAGCAAAGGTACAAGATGAGCCACCACCATTTTTTGAACGAAAAAATCGTGTAGAGAACGATTGTTTCTGTTCGGGAGTGACCGAACGTTGTCGGATGGCCCTTGATCTGTACCGAATGAGAAAAACATACGATCTGTCAAACTTGACTGCAGTAAGGCTGGGCGGCGAATCAACCGGTGCCAAATATATCCGTATTCCGTTATCAGTTTTGCTT GGTAACCTGATCACAGCTTACGGAGGC ]
[+] EMBL BM586143 [ CCG AGAATAGTGCAGTAGCAGATTCAGCTCTACTATGTGGAATGATTGTGTGAAACTTTTGGCTGTTGTGGGACTCCTTTTCCCATTGTGTATTTTAGTAAATT GCAACGATTCCGAAGATGTCTCGTTGGAATACGAAACAACTCCAACGTTTGATGTGGTGATAGCGGAGGGGAAAAAACTCAAACTCAAGGTGCATGACTACGGACATCGACCCTTGTGCAATCCAGTATGGTACTTCAACGGTCGGCCGGTTTCAAAGTCGCGTTGCATTCCCAGCTATGGTGAGCTGGTTTGTCCCTCGGTAAAAC GTGAAGATGCTGGACGATATGATCTATGGGGAGGAGATGGTAGTCGGCATAGTCAGGCGCGTTTGATATTCTCCGCTAATGTGCAAGTCACGAGAGCTGTTGAACGGGATCTGCCGGAGGAACGCATAGCAAAGGTACAAGATGAGCCACCACCATTTTTTGAACGAAAAAATCGTGTAGAGAACGATTGTTTCTGTTCGGGAGTGACCGAACGTTGTCGGATGGCCCTTGATCTGTACCGAATGAGAAAAACATACGATCTGTCAAACTTGACTGCAGTAAGGCTGGGCGGTGAATCATCCGGTGCCAACTATATCCGTATTCCGTTATCAGTTTTGCTT GGTAACCTGATCACAGCTTACGGAGGCTATATGCGT ]
[+] EMBL BM647063 [ ccgcgc AGAATAGTGCAGTAGCAGATTCAGCTCTACTATGTGGAATGATTGTGTGAAACTTTTGGCTGTTGTGGGACTCCTTTTCCCATTGTGTATTTTAGTAAATT GCAACGATTCCGAAGATGTCTCGTTGGAATACGAAACAACTCCAACGTTTGATGTGGTGATAGCGGAGGGGAAAAAACTCAAACTCAAGGTGCATGACTACGGACATCGACCCTTGTGCAATCCAGTATGGTACTTCAATGGTCGGCCGGTTTCAAAGTCGCGTTGCATTCCCAGCTATGGTGAGCTGGTTTGTCCCTCGGTAAAAC GTGAAGATGCTGGACGATATGATCTATGGGGAGGAGATGGTAGTCGGCATAGTCAGGCGCGTTTGATATTCTCCGCTAATGTGCAAGTCACGAGAGCTGTTGAACGGGATCTGCCGAAGGAATGCATAGCAAAGGTACAAGATGAGCCACCACCATTTTTTGAACGAAAAAATCGTGTAGAGAACGATTGTTTCTGTTCGGGAGTGACCGAACGTTGTCGGATGGCCCTTGATCTGTACCGAATGAGAAAAACATACGATCTGTCAAACTTGACTGCAGTAAGGCTGGGCGGCGAATCAACCGGTGCCAAATATATCCGTATTCCGTTATCAGTTTTGCTT GGTAACCTGATCACAGCTTACGGAGGCTATATGCGTTTTCCTGTTACTGAAGAATGCTATACTGATCGC ]
[+] EMBL BM656353 [ ccgcgc AGAATAGTGCAGTAGCAGATTCAGCTCTACTATGTGGAATGATTGTGTGAAACTTTTGGCTGTTGTGGGACTCCTTTTCCCATTGTGTATTTTAGTAAATT GCAACGATTCCGAAGATGTCTCGTTGGAATACGAAACAACTCCAACGTTTGATGTGGTGATAGCGGAGGGGAAAAAACTCAAACTCAAGGTGCATGACTACGGACATCGACCCTTGTGCAATCCAGTATGGTACTTCAACGGTCGGCCGGTTTCAAAGTCGCGTTGCATTCCCAGCTATGGTGAGCTGGTTTGTCCCTCGGTAAAAC GTGAAGATGCTGGACGATATGATCTATGGGGAGGAGATGGTAGTCGGCATAGTCAGGCGCGTTTGATATTCTCCGCTAATGTGCAAGTCACGAGAGCTGTTGAACGGGATCTGCCGGAGGAACGCATAGCAAAGGTACAAGATGAGCCACCACCATTTTTTGAACGAAAAAATCGTGTAGAGAACGATTGTTTCTGTTCGGGAGTGACCGAACGTTGTCGGATGGCCCTTGATCTGTACCGAATGAGACAAACATACGATCTGTCAA ]
[+] EMBL BM602772 [ ccgGTGCAGTAGCAGATTCAGCTCTACTATGTGGAATGATTGTGTGAAACTTTTGGCTGTTGTGGGACTCCTTTTCCCATTGTGTATTTTAGTAAATT GCAACGATTCCGAAGATGTCTCGTTGGAATACGAAACAACTCCAACGTTTGATGTGGTGATAGCGGAGGGGAAAAAACTCAAACTCAAGGTGCATGACTACGGACATCGACCCTTGTGCAATCCAGTATGGTACTTCAATGGTCGGCCGGTTTCAAAGTCGCGTTGCATTCCCAGCTATGGTGAGCTGGTTTGTCCCTCGGTAAAAC GTGAAGATGCTGGACGATATGATCTATGGGGAGGAGATGGTAGTCGGCATAGTCAGGCGCGTTTGATATTCTCCGCTAATGTGCAAGTCACGAGAGCTGTTGAACGGGATCTGCCGGAGGAACGCATAGCAAAGGTACAAGATGAGCCACCACCATTTTTTGAACGAAAAAATCGTGTAGAGAACGATTGTTTCTGTTCGGGAGTGACCGAACGTTGTCGGATGGCCCTTGATCTGTACCGAATGAGAAAAACATACGATCTGTCAAACTTGACTGCAGTAAGGCTGGGCGGTGAATCATCCGGTGCCAAATATATCCGTATTCCGTTATCAGGTTTGCTT GGTAACCTGATCACAGCTTACGGAGGC ]
[+] EMBL BM610655 [ ccgGTGCAGTAGCAGATTCAGCTCTACTATGTGGAATGATTGTGTGAAACTTTTGGCTGTTGTGGGACTCCTTTTCCCATTGTGTATTTTAGTAAATT GCAACGATTCCGAAGATGTCTCGTTGGAATACGAAACAACTCCAACGTTTGATGTGGTGATAGCGGAGGGGAAAAAACTCAAACTCAAGGTGCATGACTACGGACATCGACCCTTGTGCAATCCAGTATGGTACTTCAATGGTCGGCCGGTTTCAAAGTCGCGTTGCATTCCCAGCTATGGTGAGCTGGTTTGTCCCTCGGTAAAAC GTGAAGATGCTGGACGATATGATCTATGGGGAGGAGATGGTAGTCGGCATAGTCAGGCGCGTTTGATATTCTCCGCTAATGTGCAAGTCACGAGAGCTGTTGAACGGGATCTGCCGGAGGAACGCATAGCAAAGGTACAAGATGAGCCACCACCATTTTTTGAACGAAAAAATCGTGTAGAGAACGATTGTTTCTGTTCGGGAGTGACCGAACGTTGTCGGATGGCCCTTGATCTGTACCGAATGAGAAAAACATACGATCTGTCAAACTTGACTGCAGTAAGGCTGGGCGGTGAATCATCCGGTGCCAACTATATCCGTATTCCGTTATCAGTTTTGCTT GGTAACCTGATCACAGCTTACGG ]
[+] EMBL BM600132 [ ccgGCAGTAGCAGATTCAGCTCTACTATGTGGAATGATTGTGTGAAACTTTTGGCTGTTGTGGGACTCCTTTTCCCATTGTGTATTTTAGTAAATT GCAACGATTCCGAAGATGTCTCGTTGGAATACGAAACAACTCCAACGTTTGATGTGGTGATAGCGGAGGGGAAAAAACTCAAACTCAAGGTGCATGACTACGGACATCGACCCTTGTGCAATCCAGTATGGTACTTCAATGGTCGGCCGGTTTCAAAGTCGCGTTGCATTCCCAGCTATGGTGAGCTGGTTTGTCCCTCGGTAAAAC GTGAAGATGCTGGACGATATGATCTATGGGGAGGAGATGGTAGTCGGCATAGTCAGGCGCGTTTGATATTCTCCGCTAATGTGCAAGTCACGAGAGCTGTTGAACGGGATCTGCCGGAGGAACGCATAGCAAAGGTACAAGATGAGCCACCACCATTTTTTGAACGAAAAAATCGTGTAGAGAACGATTGTTTCTGTTCGGGAGTGACCGAACGTTGTCGGATGGCCCTTGATCTGTACCGAATGAGAAAAACATACGATCTGTCAAACTTGACTGCAGTAAGGCTGGGCGGTGAATCATCCGGTGCCAAATATATCCGTATTCCGTTATCAGTTTTGCT ]
[+] EMBL BM610184 [ ccgAGCAGATTCAGCTCTACTATGTGGAATGATTGTGTGAAACTTTTGGCTGTTGTGGGACTCCTTTTCCCATTGTGTATTTTAGTAAATT GCAACGATTCCGAAGATGTCTCGTTGGAATACGAAACAACTCCAACGTTTGATGTGGTGATAGCGGAGGGGAAAAAACTCAAACTCAAGGTGCATGACTACGGACATCGACCCTTGTGCAATCCAGTATGGTACTTCAATGGTCGGCCGGTTTCAAAGTCGCGTTGCATTCCCAGCTATGGTGAGCTGGTTTGTCCCTCGGTAAAAC GTGAAGATGCTGGACGATATGATCTATGGGGAGGAGATGGTAGTCGGCATAGTCAGGCGCGTTTGATATTCTCCGCTAATGTGCAAGTCACGAGAGCTGTTGAACGGGATCTGCCGGAGGAACGCATAGCAAAGGTACAAGATGAGCCACCACCATTTTTTGAACGAAAAAATCGTGTAGAGAACGATTGTTTCTGTTCGGGAGTGACCGAACGTTGTCGGATGGCCCTTGATCTGTACCGAATGAGAAAAACATACGATCTGTCAAACTTGACTGCAGTAAGGCTGGGCGGTGAATCATCCGGTGCCAAATATATCCGTATTCCGTTATCAGTTTTGCTTGGGTAAC ]
[+] EMBL BM592237 [ ccgAGCAGATTCAGCTCTACTATGTGGAATGATTGTGTGAAACTTTTGGCTGTTGTGGGACTCCTTTTCCCATTGTGTATTTTAGTAAATT GCAACGATTCCGAAGATGTCTCGTTGGAATACGAAACAACTCCAACGTTTGATGTGGTGATAGCGGAGGGGAAAAAACTCAAACTCAAGGTGCATGACTACGGACATCGACCCTTGTGCAATCCAGTATGGTACTTCAATGGTCGGCCGGTTTCAAAGTCGCGTTGCATTCCCAGC ]
[+] EMBL BM580420 [ ccgAGCAGATTCAGCTCTACTATGTGGAATGATTGTGTGAAACTTTTGGCTGTTGTGGGACTCCTTTTCCCATTGTGTATTTTAGTAAATT GCAACGATTCCGAAGATGTCTCGTTGGAATACGAAACAACTCCAACGTTTGATGTGGTGATAGCGGAGGGGAAAAAACTCAAACTCAAGGTGCATGACTACGGACATCGACCCTTGTGCAATCCAGTATGGTACTTCAATGGTCGGCCGGTTTCAAAGTCGCGTTGCATTCCCAGCTATGGTGAGCTGGTTTGTCCCTCGGTAAAAC GTGAAGATGCTGGACGATATGATCTATGGGGAGGAGATGGTAGTCGGCATAGTCAGGCGCGTTTGATATTCTCCGCTAATGTGCAAGTCACGAGAGCTGTTGAACGGGATCTGCCGAAGGAACGCATAGCAAAGGTACAAGATGAGCCACCACCATTTTTTGAACGAAAAAATCGTGTAGAGAACGATTGTTTCTGTTCGGGAGTGACCGAACGTTGTCGGATGGCCCTTGATCTGTACCGAATGAGAAAAACATACGATCTGTCAAACTTGACTGCAGTAAGGCTGGGCGGCGAATCAACCGGTGCCAAATATATCCGTATTCCGTTATCAGTTTTGCTT GGTAACCTGATCACAGCTTACGGAGGCTATATGCGTTTTCCTGTTACT ]
[+] EMBL CNS08UYW [ AGCTCTACTATGTGGAATGATTGTGTGAAA TTTTGGCTGTTGTGGGACTCCTTTTCCCATTGTGTATTTTAGTAAATTCGCAACGATTCCGAAGATGTCTCGTTGGAATACGAAACAACTCCAACGTTTGATGTGGTGATAGCGGAGGGGAAAAAACTCAAACTCAAGGTGCATGACTACGGACATCGACCCTTGTGCAATCCAGTATGGTACTTCAATGGTCGGCCGGTTTCAAAGTCGCGTTGCATTCCCAGCTATGGTGAGCTGGTTTGTCCCTCGGTAAAACGGTGAAGATGCTGGACGATATGATCTATGGGGAGGAGATGGTAGTCGGCATAGTCAGGCGCGTTTGATATTCTCCGCTAATGTGCAAGTCACGAGAGCTGTTGAACGGGATCTGCCGGA GAACGCATAGCAAAGGTACAAGATGAGCCACCACCATTTTTTGAACGAAAAAATCGTGTAGAGAACGAT ]
[+] EMBL CNS094MF [ CTACTATGTGGAATGATTGTCTG AACTTTTGGCTGTTGTGGGACTCCTTTTCCCATTGTGTATTTTAGTAAATT GCAACGATTCCGAAGATGTCTCGTTGGAATACGAAACAACTCCAACGTTTGATGTGGTGATAGCGGAGGGGAAAAAACTCAAACTCAAGGTGCATGACTACGGACATCGACCCTTGTGCAATCCAGTATGGTACTTCAATGGTCGGCCGGTTTCAAAGTCGCGTTGCATTCCCAGCTATGGTGAGCTGGTTTGTCCCTCGGTAAAAC GTGAAGATGCTGGACGATATAATCTATGGGGAGGAGATGGTAGTCGGCATAGTCAGGCGCGTTTGATATTCTCCGCTAATGTGCAAGTCACGAGAGCTGTTGAACGGGATCTGCCGGAGGAACGCATAGCAAAGGTACAAGATGAGCCACCACCATTTTTTGAACGAAAAAATCGTGTAGAGAACGATTGTTTTTGTTCGGGAGTGACCGAACGTTGTCGGATGGCCCTTGATCTGTACCGAATGAGAAAAACATACGATCTGTCAAACTTCACTGCAGTAAGGCTGGGCGACGAATCAACCGGTGCCAAATATATCCGTATTCCGTTATCAGTTTTGCTT GGTAACCTGATCACAGCTTACGGAGGCTATATGCGTTTTCCTGTTACTGAAGAATGCTATACTGATCGCAGCAAACCGTGTGTGGT]
[+] EMBL BX606576 [ GGAATACGAAACAACTCCAACGTTTGATGTGGTGATAGCGGAGGGGAAAAAACTCAAACTCAAGGTGCATGACTACGGACATCGACCCTTGTGCAATCCAGTATGGTACTTCAACGGTCGGCCGGTTTCAAAGTCGCGTTGCATTCCCAGCTATGGTGAGCTGGTTTGTCCCTCGGTAAAAC GTGAAGATGCTGGACGATATGATCTATGGGGAGGAGATGTTAGTCGGCATAGTCAGGCGCGTTTGATATTCTCCGCTAATGTGCAAGTCACGAGAGCTGTTGAACGGGATCTGCCGGAGGAACGCATAGCAAAGGTACAAGATGAGCCACCACCATTTTTTGAACGAAAAAATCGTGTAGAGAACGATTGTTTCTGTTCGGGAGTGACCGAACGTTGTCGGATGGCCCTTGATCTGTACCGAATGAGAAAAACATACGATCTGTCAAACTTGACTGCAGTAAGGCTGGGCGGTGAATCATCCGGTGCCAACTATATCCGTATTCCGTTATCAGTTTTGCTT GGTAACCTGATCACAGCTTACGGAGGCTATATGCGTTTTCCTGTTACTGAAGAATGCTATACTGATCGCAGCCAACCGTGTGTGGT]
[+] EMBL BX628548 [ GCTGTTGAACGGGATCTGCCGGAGGAACGCATAGCAAAGGTACAAGATGAGCCACCACCATTTTTTGAACGAAAAAATCGTGTAGAGAACGATTGTTTTTGTTCGGGAGTGACCGAACGTTGTCGGATGGCCCTTGATCTGTACCGAATGAGAAAAACATACGATCTGTCAAACTTCACTGCAGTAAGGCTGGGCGACGAATCAACCGGTGCCAAATATATCCGTATTCCGTTATCAGTTTTGCTT GGTAACCTGATCACAGCTTACGGAGGCTATATGCGTTTTCCTGTTACTGAAGAATGCTATACTGATCGCAGCAAACCGTGTGTGGT]
[+] EMBL BX605223 [ GAGTGACCGAACGTTGTCGGAAGGCCCTTGATCTGTACCGAATGAGAAAAACATACGAACTGTCAAACTTGACTGCAGTAAGGCTGGGCGGTGAATCATCCGGTGCCAAATATATCCGTATTCCGTTATCAGTTTTGCTG GGTAACCTGATCACAGCTTACGGAGGCTATATGCGTTTTCCCGTTACTGAAGAAGGCTATACTGAT ]
consensusID : consensus_9920#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 691 fasta sequence
[CCGCCCACGCGTCCGCCCACGCGTCCG--GCAGTAGCAGATTCAGCTCTACTATGTGGAATGATTGTGTGAAACTTTTGGCTGTTGTGGGACTCCTTTTCCCATTGTGTATTTTAGTAAATTGCAACGATTCCGAAGATGTCTCGTTGGAATACGAAACAACTCCAACGTTTGATGTGGTGATAGCGGAGGGGAAAAAACTCAAACTCAAGGTGCATGACTACGGACATCGACCCTTGTGCAATCCAGTATGGTACTTCAACGGTCGGCCGGTTTCAAAGTCGCGTTGCATTCCCAGCTATGGTGAGCTGGTTTGTCCCTCGGTAAAACGTGAAGATGCTGGACGATATGATCTATGGGGAGGAGATGGTAGTCGGCATAGTCAGGCGCGTTTGATATTCTCCGCTAATGTGCAAGTCACGAGAGCTGTTGAACGGGATCTGCCGGAGGAACGCATAGCAAAGGTACAAGATGAGCCACCACCATTTTTTGAACGAAAAAATCGTGTAGAGAACGATTGTTTCTGTTCGGGAGTGACCGAACGTTGTCGGATGGCCCTTGATCTGTACCGAATGAGAAAAACATACGATCTGTCAAACTTGACTGCAGT-AAGGCTGGGCGGTGAATCATCCGGTGCCAACTATATCCGTATTCCGTTATCAGTTTTGCTTGGTAACCTGATCACAGCTTACGG]
[+] EMBL BM642010 [CCGCCCACGCGTCCGCCCACGCGTCCGGTGCAGTAGCAGATTCAGCTCTACTATGTGGAATGATTGTGTGAAACTTTTGGCTGTTGTGGGACTCCTTTTCCCATTGTGTATTTTAGTAAATTGCAACGATTCCGAAGATGTCTCGTTGGAATACGAAACAACTCCAACGTTTGATGTGGTGATAGCGGAGGGGAAAAAACTCAAACTCAAGGTGCATGACTACGGACATCGACCCTTGTGCAATCCAGTATGGTACTTCAATGGTCGGCCGGTTTCAAAGTCGCGTTGCATTCCCAGCTATGGTGAGCTGGTTTGTCCCTCGGTAAAACGTGAAGATGCTGGACGATATGATCTATGGGGAGGAGATGGTAGTCGGCATAGTCAGGCGCGTTTGATATTCTCCGCTAATGTGCAAGTCACGAGAGCTGTTGAACGGGATCTGCCGGAGGAACGCATAGCAAAGGTACAAGATGAGCCACCACCATTTTTTGAACGAAAAAATCGTGTAGAGAACGATTGTTTCTGTTCGGGAGTGACCGAACGTTGTCGGATGGCCCTTGATCTGTACCGAATGAGAAAAACATACGATCTGTCAAACTTGACTGCAGT AAGGCTGGGCGGTGAATCATCCGGTGCCAAATATATCCGTATTCCGTTATCAGTTTTGCTTGGTAACCTGATCACAGCTTACGG]
[+] EMBL BM656854 [CCGCGGACGCGTGGGCGGACGCGT G G G AGCAGATTCAGCTCTACTATGTGGAATGATTGTGTGAAACTTTTGGCTGTTGTGGGACTCCTTTTCCCATTGTGTATTTTAGTAAATTGCAACGATTCCGAAGATGTCTCGTTGGAATACGAAACAACTCCAACGTTTGATGTGGTGATAGCGGAGGGGAAAAAACTCAAACTCAAGGTGCATGACTACGGACATCGACCCTTGTGCAATCCAGTATGGTACTTCAACGGTCGGCCGGTTTCAAAGTCGCGTTGCATTCCCAGCTATGGTGAGCTGGTTTGTCCCTCGGTAAAACGTGAAGATGCTGGACGATATGATCTATGGGGAGGAGATGGTAGTCGGCATAGTCAGGCGCGTTTGATATTCTCCGCTAATGTGCAAGTCACGAGAGCTGTTGAACGGGATCTGCCGGAGGAACGCATAGCAAAGGTACAAGATGAGCCACCACCATTTTTTGAACGAAAAAATCGTGTAGAGAACGATTGTTTCTGTTCGGGAGTGACCGAACGTTGTCGGATGGCCCTTGATCTGTACCGAATGAGAAAAACATACGATCTGTCAAACTTGACTGCAGT AAGGCTGGGCGGTGAATCATCCGGTGCCAACTATATCCGTATTCCGTTATCAGTTTTGCTTGG ]
[+] EMBL BM575935 [ CCGCCCACGCGTCCG GCAGTAGCAGATTCAGCTCTACTATGTGGAATGATTGTGTGAAACTTTTGGCTGTTGTGGGACTCCTTTTCCCATTGTGTATTTTAGTAAATTGCAACGATTCCGAAGATGTCTCGTTGGAATACGAAACAACTCCAACGTTTGATGTGGTGATAGCGGAGGGGAAAAAACTCAAACTCAAGGTGCATGACTACGGACATCGACCCTTGTGCAATCCAGTATGGTACTTCAACGGTCGGCCGGTTTCAAAGTCGCGTTGCATTCCCAGCTATGGTGAGCTGGTTTGTCCCTCGGTAAAACGTGAAGATGCTGGACGATATGATCTATGGGGAGGAGATGGTAGTCGGCATAGTCAGGCGCGTTTGATATTCTCCGCTAATGTGCAAGTCACGAGAGCTGTTGAACGGGATCTGCCGGAGGAACGCATAGCAAAGGTACAAGATGAGCCACCACCATTTTTTGAACGAAAAAATCGTGTAGAGAACGATTGTTTCTGTTCGGGAGTGACCGAACGTTGTCGGATGGCCCTTGATCTGTACCGAATGAGAAAAACATACGATCTGTCAAACTTGACTGCAGTAAAGGCTGGGCGGTGAATCATCCGGTGCCAACTATATCCGTATTCCGTTATCAGTTTTGCT ]
[+] EMBL BM582611 [ CCGCGGACGCGT G G G AGCAGATTCAGCTCTACTATGTGGAATGATTGTGTGAAACTTTTGGCTGTTGTGGGACTCCTTTTCCCATTGTGTATTTTAGTAAATTGCAACGATTCCGAAGATGTCTCGTTGGAATACGAAACAACTCCAACGTTTGATGTGGTGATAGCGGAGGGGAAAAAACTCAAACTCAAGGTGCATGACTACGGACATCGACCCTTGTGCAATCCAGTATGGTACTTCAACGGTCGGCCGGTTTCAAAGTCGCGTTGCATTCCCAGCTATGGTGAGCTGGTTTGTCCCTCGGTAAAACGTGAAGATGCTGGACGATATGATCTATGGGGAGGAGATGGTAGTCGGCATAGTCAGGCGCGTTTGATATTCTCCGCTAATGTGCAAGTCACGAGAGCTGTTGAACGGGATCTGCCGGAGGAACGCATAGCAAAGGTACAAGATGAGCCACCACCATTTTTTGAACGAAAAAATCGTGTAGAGAACGATTGTTTCTGTTCGGGAGTGACCGAACGTTGTCGGATGGCCCTTGATCTGTACCGAATGAGAAAAACATACGATCTGTCAAACTTGACTGCAGT AAGGCTGGGCGGTGAATCATCC ]
[+] EMBL BM624001 [ CCG GCAGTAGCAGATTCAGCTCTACTATGTGGAATGATTGTGTGAAACTTTTGGCTGTTGTGGGACTCCTTTTCCCATTGTGTATTTTAGTAAATTGCAACGATTCCGAAGATGTCTCGTTGGAATACGAAACAACTCCAACGTTTGATGTGGTGATAGCGGAGGGGAAAAAACTCAAACTCAAGGTGCATGACTACGGACATCGACCCTTGTGCAATCCAGTATGGTACTTCAACGGTCGGCCGGTTTCAAAGTCGCGTTGCATTCCCAGCTATGGTGAGCTGGTTTGTCCCTCGGTAAAACGTGAAGATGCTGGACGATATGATCTATGGGGAGGAGATGGTAGTCGGCATAGTCAGGCGCGTTTGATATTCTCCGCTAATGTGCAAGTCACGAGAGCTGTTGAACGGGATCTGCCGGAGGAACGCATAGCAAAGGTACAAGATGAGCCACCACCATTTTTTGAACGAAAAAATCGTGTAGAGAACGATTGTTTCTGTTCGGGAGTGACCGAACGTTGTCGGATGGCCCTTGATCTGTACCGAATGAGAAAAACATACGATCTGTCAAACTTGACTGCAGT AAGGCTGGGCGGTGAATCATCCGGTGCCAACTATATCCGTATT ]
consensusID : consensus_9920#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 408 fasta sequence
[GGGCAGAATAGTGCAGTAGCAGATTCAGCTCTACTATGTGGAATGATTGTGTGAAACTTTTGGCTGTTGTGGGACTCCTTTTCCCATTGTGTATTTTAGTAAATTGCAACGGCAAGAGACTTAATTTTGCTTGATTCAAATATTACTGCGAAGTAATAGTGTTTTGTTCTCTTCAGATTCCGAAGATGTCTCGTTGGAATACGAAACAACTCCAACGTTTGATGTGGTGATAGCGGAGGGGAAAAAACTCAAACTCAAGGTGCATGACTACGGACATCGACCCTTGTGCAATCCAGTATGGTACTTCAATGGTCGGCCGGTTTCAAAGTCGCGTTGCATTCCCAGCTATGGTGAGCTGGTTTGTCCCTCGGTAAAACGTGAAGATGCTGGACGATATGATCTATGGGG]
[+] EMBL BX602964 [GGGCAGAATAGTGCAGTAGCAGATTCAGCTCTACTATGTGGAATGATTGTGTGAAACTTTTGGCTGTTGTGGGACTCCTTTTCCCATTGTGTATTTTAGTAAATTGCAACGGCAAGAGACTTAATTTTGCTTGATTCAAATATTACTGCGAAGTAATAGTGTTTTGTTCTCTTCAGATTCCGAAGATGTCTCGTTGGAATACGAAACAACTCCAACGTTTGATGTGGTGATAGCGGAGGGGAAAAAACTCAAACTCAAGGTGCATGACTACGGACATCGACCCTTGTGCAATCCAGTATGGTACTTCAATGGTCGGCCGGTTTCAAAGTCGCGTTGCATTCCCAGCTATGGTGAGCTGGTTTGTCCCTCGGTAAAACGTGAAGATGCTGGACGATATGATCTATGGGG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9920#0 CAAGTTTTAATCTGTTGCGTTGTGTCGATATGATCAGTAAGTCATTATCCGAGAATAGTG 60
consensus_9920#1 ------------------------------CCGCCCACGCGTC--CGCCCACGCGTCCGG 28
consensus_9920#2 ----------------------------------------------GGGCA-GAATAGTG 13
* * * *
consensus_9920#0 CAGTAGCAGATTCAGCTCTACTATGTGGAATGATTGTGTGAAACTTTTGGCTGTTGTGGG 120
consensus_9920#1 CAGTAGCAGATTCAGCTCTACTATGTGGAATGATTGTGTGAAACTTTTGGCTGTTGTGGG 88
consensus_9920#2 CAGTAGCAGATTCAGCTCTACTATGTGGAATGATTGTGTGAAACTTTTGGCTGTTGTGGG 73
************************************************************
consensus_9920#0 ACTCCTTTTCCCATTGTGTATTTTAGTAAATTGCAACG---------------------- 158
consensus_9920#1 ACTCCTTTTCCCATTGTGTATTTTAGTAAATTGCAACG---------------------- 126
consensus_9920#2 ACTCCTTTTCCCATTGTGTATTTTAGTAAATTGCAACGGCAAGAGACTTAATTTTGCTTG 133
**************************************
consensus_9920#0 -------------------------------------------ATTCCGAAGATGTCTCG 175
consensus_9920#1 -------------------------------------------ATTCCGAAGATGTCTCG 143
consensus_9920#2 ATTCAAATATTACTGCGAAGTAATAGTGTTTTGTTCTCTTCAGATTCCGAAGATGTCTCG 193
*****************
consensus_9920#0 TTGGAATACGAAACAACTCCAACGTTTGATGTGGTGATAGCGGAGGGGAAAAAACTCAAA 235
consensus_9920#1 TTGGAATACGAAACAACTCCAACGTTTGATGTGGTGATAGCGGAGGGGAAAAAACTCAAA 203
consensus_9920#2 TTGGAATACGAAACAACTCCAACGTTTGATGTGGTGATAGCGGAGGGGAAAAAACTCAAA 253
************************************************************
consensus_9920#0 CTCAAGGTGCATGACTACGGACATCGACCCTTGTGCAATCCAGTATGGTACTTCAATGGT 295
consensus_9920#1 CTCAAGGTGCATGACTACGGACATCGACCCTTGTGCAATCCAGTATGGTACTTCAACGGT 263
consensus_9920#2 CTCAAGGTGCATGACTACGGACATCGACCCTTGTGCAATCCAGTATGGTACTTCAATGGT 313
******************************************************** ***
consensus_9920#0 CGGCCGGTTTCAAAGTCGCGTTGCATTCCCAGCTATGGTGAGCTGGTTTGTCCCTCGGTA 355
consensus_9920#1 CGGCCGGTTTCAAAGTCGCGTTGCATTCCCAGCTATGGTGAGCTGGTTTGTCCCTCGGTA 323
consensus_9920#2 CGGCCGGTTTCAAAGTCGCGTTGCATTCCCAGCTATGGTGAGCTGGTTTGTCCCTCGGTA 373
************************************************************
consensus_9920#0 AAACGTGAAGATGCTGGACGATATGATCTATGGGGAGGAGATGGTAGTCGGCATAGTCAG 415
consensus_9920#1 AAACGTGAAGATGCTGGACGATATGATCTATGGGGAGGAGATGGTAGTCGGCATAGTCAG 383
consensus_9920#2 AAACGTGAAGATGCTGGACGATATGATCTATGGGG------------------------- 408
***********************************
consensus_9920#0 GCGCGTTTGATATTCTCCGCTAATGTGCAAGTCACGAGAGCTGTTGAACGGGATCTGCCG 475
consensus_9920#1 GCGCGTTTGATATTCTCCGCTAATGTGCAAGTCACGAGAGCTGTTGAACGGGATCTGCCG 443
consensus_9920#2 ------------------------------------------------------------
consensus_9920#0 GAGGAACGCATAGCAAAGGTACAAGATGAGCCACCACCATTTTTTGAACGAAAAAATCGT 535
consensus_9920#1 GAGGAACGCATAGCAAAGGTACAAGATGAGCCACCACCATTTTTTGAACGAAAAAATCGT 503
consensus_9920#2 ------------------------------------------------------------
consensus_9920#0 GTAGAGAACGATTGTTTCTGTTCGGGAGTGACCGAACGTTGTCGGATGGCCCTTGATCTG 595
consensus_9920#1 GTAGAGAACGATTGTTTCTGTTCGGGAGTGACCGAACGTTGTCGGATGGCCCTTGATCTG 563
consensus_9920#2 ------------------------------------------------------------
consensus_9920#0 TACCGAATGAGAAAAACATACGATCTGTCAAACTTGACTGCAGTAAGGCTGGGCGGTGAA 655
consensus_9920#1 TACCGAATGAGAAAAACATACGATCTGTCAAACTTGACTGCAGTAAGGCTGGGCGGTGAA 623
consensus_9920#2 ------------------------------------------------------------
consensus_9920#0 TCATCCGGTGCCAAATATATCCGTATTCCGTTATCAGTTTTGCTTGGTAACCTGATCACA 715
consensus_9920#1 TCATCCGGTGCCAACTATATCCGTATTCCGTTATCAGTTTTGCTTGGTAACCTGATCACA 683
consensus_9920#2 ------------------------------------------------------------
consensus_9920#0 GCTTACGGAGGCTATATGCGTTTTCCTGTTACTGAAGAATGCTATACTGATCGCAGCAAA 775
consensus_9920#1 GCTTACGG---------------------------------------------------- 691
consensus_9920#2 ------------------------------------------------------------
consensus_9920#0 CCGTGTGTGGT 786
consensus_9920#1 -----------
consensus_9920#2 -----------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||