These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_998#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 510 fasta sequence [ATTCCATCAGCGCTTCAGCAGGACATTCGCAGGACACCCACCCACCGAGAGAAAGCCAGAGTGCAAAATGATCAAACCGTTCGTCTGCATACTGATCGTGGCGGCCGGTTGCGCCAACGCCTTCATGTACAAACACCCGTACAACCACCATCAGGCGGCGGTGCTGGCCCACGAGCCGGTCGTACCGGTGGAGTTTGTAAAGCACACCACCAGCCCCGCCTTCCGGCCCGCCTCCTTCCTCGAGGTGATGGAGGTCGTGCTGGACTGCTTCAACACGCTGCGCATCCCGCTGCAGCGGTTCCCCTCCTACCTGTCCGGCATCTTCCCGGAGGATCCGGAAACGAAGTGCTTCCTGCGCTGCGTCGCCATCAAGCTGGGCGTGTACTGCGACGAGAAGGGTGCCGATCTGGACCGGCACTGCGTACAGTTCGGGCTGGGCGAATGCTGCGAAAACTTCTCCAACCGCCATCTGGTCTGCCTGCAGCAGAACTCCCTGCCCTGCCCGGATCG] [+] EMBL BX627268 [ATTCCATCAGCGCTTCAGCAGGACATTCGCAGGACACCCACCCACCGAGAGAAAGCCAGAGTGCAAAATGATCAAACCGTTCGTCTGCATACTGATCGTGGCGGCCGGTTGCGCCAACGCCTTCATGTACAAACACCCGTACAACCACCATCAGGCGGCGGTGCTGGCCCACGAGCCGGTCGTACCGGTGGAGTTTGTAAAGCACACCACCAGCCCCGCCTTCCGGCCCGCCTCCTTCCTCGAGGTGATGGAGGTCGTGCTGGACTGCTTCAACACGCTGCGCATCCCGCTGCAGCGGTTCCCCTCCTACCTGTCCGGCATCTTCCCGGAGGATCCGGAAACGAAGTGCTTCCTGCGCTGCGTCGCCATCAAGCTGGGCGTGTACTGCGACGAGAAGGGTGCCGATCTGGACCGGCACTGCGTACAGTTCGGGCTGGGCGAATGCTGCGAAAACTTCTCCAACCGCCATCTGGTCTGCCTGCAGCAGAACTCCCTGCCCTGCCCGGATCG] consensusID : consensus_998#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 443 fasta sequence [ATCGGCCGAGGTGAGAGAAAGCCAGAGTGCAAATGATCCAACCGTTCGTCTGCATACTGATCGTGGCGGCGGTTGCGCCAACGCCTTCATGTACAAACACCCGTACAACCACCATCAGGCGGCGGTGCTGGCCCACGAGCCGGTCGTACCGGTGGAGTTTGTAAAGCACACCACCAGCCCCGCCTTCCGGCCCGCCTCCTTCCTCGANGTGATGGAGGTCGTGCTGGACTGCTTCAACACGCTGCGCATCCCGCTGCAGCGGTTCCCCTCCTACCTGTCCGGCATCTTCCCGGAGGATCCGGAAACGAAGTGCTTCCTGCGCTGCGTCGCCATCAAGCTGGGCGTGTACTGCGACGAGAAGGGTGCCGATCTGGACCGGCACTGCGTACAGTTCGGGCTGGGCGAATGCTGCGAAAACTTCTCCAACCGCCATCTGGTCTGCC] [+] EMBL AL932671 [ATCGGCCGAGGTGAGAGAAAGCCAGAGTGCAAATGATCCAACCGTTCGTCTGCATACTGATCGTGGCGGCGGTTGCGCCAACGCCTTCATGTACAAACACCCGTACAACCACCATCAGGCGGCGGTGCTGGCCCACGAGCCGGTCGTACCGGTGGAGTTTGTAAAGCACACCACCAGCCCCGCCTTCCGGCCCGCCTCCTTCCTCGANGTGATGGAGGTCGTGCTGGACTGCTTCAACACGCTGCGCATCCCGCTGCAGCGGTTCCCCTCCTACCTGTCCGGCATCTTCCCGGAGGATCCGGAAACGAAGTGCTTCCTGCGCTGCGTCGCCATCAAGCTGGGCGTGTACTGCGACGAGAAGGGTGCCGATCTGGACCGGCACTGCGTACAGTTCGGGCTGGGCGAATGCTGCGAAAACTTCTCCAACCGCCATCTGGTCTGCC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_998#0 ATTCCATCAGCGCTTCAGCAGGACATTCGCAGGACACCCACCCAC-CGAGAGAAAGCCAG 59 consensus_998#1 -----------------------------------ATCGGCCGAGGTGAGAGAAAGCCAG 25 * * ** * ************* consensus_998#0 AGTGCAAAATGATCAAACCGTTCGTCTGCATACTGATCGTGGCGGCCGGTTGCGCCAACG 119 consensus_998#1 AGTGCAAA-TGATCCAACCGTTCGTCTGCATACTGATCGTGGCGGC-GGTTGCGCCAACG 83 ******** ***** ******************************* ************* consensus_998#0 CCTTCATGTACAAACACCCGTACAACCACCATCAGGCGGCGGTGCTGGCCCACGAGCCGG 179 consensus_998#1 CCTTCATGTACAAACACCCGTACAACCACCATCAGGCGGCGGTGCTGGCCCACGAGCCGG 143 ************************************************************ consensus_998#0 TCGTACCGGTGGAGTTTGTAAAGCACACCACCAGCCCCGCCTTCCGGCCCGCCTCCTTCC 239 consensus_998#1 TCGTACCGGTGGAGTTTGTAAAGCACACCACCAGCCCCGCCTTCCGGCCCGCCTCCTTCC 203 ************************************************************ consensus_998#0 TCGAGGTGATGGAGGTCGTGCTGGACTGCTTCAACACGCTGCGCATCCCGCTGCAGCGGT 299 consensus_998#1 TCGANGTGATGGAGGTCGTGCTGGACTGCTTCAACACGCTGCGCATCCCGCTGCAGCGGT 263 **** ******************************************************* consensus_998#0 TCCCCTCCTACCTGTCCGGCATCTTCCCGGAGGATCCGGAAACGAAGTGCTTCCTGCGCT 359 consensus_998#1 TCCCCTCCTACCTGTCCGGCATCTTCCCGGAGGATCCGGAAACGAAGTGCTTCCTGCGCT 323 ************************************************************ consensus_998#0 GCGTCGCCATCAAGCTGGGCGTGTACTGCGACGAGAAGGGTGCCGATCTGGACCGGCACT 419 consensus_998#1 GCGTCGCCATCAAGCTGGGCGTGTACTGCGACGAGAAGGGTGCCGATCTGGACCGGCACT 383 ************************************************************ consensus_998#0 GCGTACAGTTCGGGCTGGGCGAATGCTGCGAAAACTTCTCCAACCGCCATCTGGTCTGCC 479 consensus_998#1 GCGTACAGTTCGGGCTGGGCGAATGCTGCGAAAACTTCTCCAACCGCCATCTGGTCTGCC 443 ************************************************************ consensus_998#0 TGCAGCAGAACTCCCTGCCCTGCCCGGATCG 510 consensus_998#1 ------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||