These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9999#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 15 consensus length = 495 fasta sequence [CCGCCCAAGATTTTCTCGACATCCCAAAATCTTCTAGCATCTGTTCTCGAAGCGATAAGGACGATTCCGTGAATTAAATAAACCGAAGATGCTGACCAACCAGATTCTATCCGCTGCCCGGATTGTTGGACTGCAGACTCGCCGTAATTACGGTGTCTCTGCTGTACTGCTGGCTAAGGCAAGCGATCCAATCCAGCAGCTGTTCGTGACCAAACTCCGTGAATACGCACAGAAGAGCCAGAGCGCTGGTGGCAAACTAGTTGATGCTACACCGGAAATCCAGCGTGAATTGAAGCAAGAGATGGAGAAACTGGCCAAGCAGTACGGAGGTGGTCAGGGCGAAGATATGACTGCCTTCCCCGCCTTCAAGTTCGAGGAGCCCAAAATTGATCCGATCAATTCCAGCGCTTGAATGGTGCCCGGTCATCTAAAAGCAGGCATCTTTAAATAGGAAATAACATTATCACTGCTCTTGAAACAGATGTAAAATAACGT] [+] EMBL BM630990 [CCGCCCACG CGTCCGCGACATCCCAAAATCTTCTAGCATCTGTTCTCGAAGCGATAAGGACGATTCCGTGAATTAAATAAACCGAAGATGCTGACCAACCAGATTCTATCCGCTGCCCGGATTGTTGGACTGCAGACTCGCCGTAATTACGGTGTCTCTGCTGTACTGCTGGCTAAGGCAAGCGATCCAATCCAGCAGCTGTTCGTGACCAAACTCCGTGAATACGCACAGAAGAGCCAGAGCGCTGGTGGCAAACTAGCTGATGCTACACCGGAAATCCAGCGTGAATTGAAGCAAGAGATGGAGAAACTGGCCAAGCAGTACGGAGGTGGTCAGGGCGAAGATATGACTGCCTTCCCCGCCTTCAAGTTCGAGGAGCCCAAAATTGATCCGATCAATTCCAGCGCTTGAATGGTGCCCGGTCATCTAAAAGCAGGCATCTTTAAATAGGAAATAACATTATCACTGCTCTTGAAACAGATGT ] [+] EMBL BM587757 [CCGCTCAAGATTTTCTCGACATCCCAAAATCTTCTAGCATCTGTTCTCGAAGCGATAAGGACGATTCCGTGAATTAAATAAACCGAAGATGCTGACCAACCAGATTCTATCCGCTGCCCGGATTGTTGGACTGCAGACTCGCCGTAATTACGGTGTCTCTGCTGTACTGCTGGCTAAGGCAAGCGATCCAATCCAGCAGCTGTTCGTGACCAAACTCCGTGAATACGCACAGAAGAGCCAGAGCGCTGGTGGCAAACTAGTTGATGCTACACCGGAAATCCAGCGTGAATTGAAGCAAGAGATGGAGAAACTGGCCAAGCAGTACGGAGGTGGTCAGGGCGAAGATATGACTGCCTTCCCCGCCTTCAAGTTCGAGGAGCCCAAAATTGATCCGATCAATTCCAGCGCTTGAATGGTGCCCGGTCATCTAAAAGCAGGCATCTTTAAATA ] [+] EMBL BM609544 [ ccgGATTTTCTCGACATCCCAAAATCTTCTAGCATCCGTTCTCGAAGCGATAAGGGCGATTCCGTAAATTAAATAAACCGAAGATGCTGACCAACCAGATTCTATCCGCTGCCCGGATTGTTGGACTGCAGACTCGCCGTAATTACGGTGTCTCCGCTGTACTGCTGGCTAAGGCAAGCGATCCAATCCAGCAGCTGTTCGTGACCAAACTCCGTGAATACGCACAGAAGAGCCAGAGCGCTGGTGGCAAACTAGTTGATGCTACACCGGAAATCCAGCGTGAATTGAAGCAAGAGATGGAGAAACTGGCCAAGCAGTACGGAGGTGGTCAGGGCGAAGATATGACTGCCTTCCCCGCCTTCAAGTTCGAGGAGCCCAAAATTGATCCGATCAATTCCAGCGCTTGAATGGTGCCCGGTCATCTAAAAGCAGGCATCTTTAAATAG ] [+] EMBL BM625168 [ CCGAAATCTTCTAGCATCCGTTCTCGAAGCGATAAGGGCGATTCCGTAAATTAAATAAACCGAAGATGCTGACCAACCAGATTCTATCCGCTGCCCGGATTGTTGGACTGCAGACTCGCCGTAATTACGGTGTCTCCGCTGTACTGCTGGCTAAGGCAAGCGATCCAATCCAGCAGCTGTTCGTGACCAAACTCCGTGAATACGCACAGAAGAGCCAGAGCGCTGGTGGCAAACTAGTTGATGCTACACCGGAAATCCAGCGTGAATTGAAGCAAGAGATGGAGAAACTGGCCAAGCAGTACGGAGGTGGTCAGGGCGAAGATATGACTGCCTTCCCCGCCTTCAAGTTCGAGGAGCCCAAAATTGATCCGATCAATTCCAGCGCTTGAATGGTGCCCGGTCATCTAAAAGCAGGCATCTTTAAATAGGAAATAACATTATCACTGCTTCTGAAACAGATGT ] [+] EMBL BM635554 [ ccgCCAAAATCTTCTAGCATCTGTTCTCGAAGCGATAAGGACGATTCCGTGAATTAAATAAACCGAAGATGCTGACCAACCAGATTCTATCCGCTGCCCGGATTGTTGGACTGCAGACTCGCCGTAATTACGGTGTCTCTGCTGTACTGCTGGCTAAGGCAAGCGATCCAATCCAGCAGCTGTTCGTGACCAAACTCCGTGAATACGCACAGAAGAGCCAGAGCGCTGGTGGCAAACTAGTTGATGCTACACCGGAAATCCAGCGTGAATTGAAGCAAGAGATGGAGAAACTGGCCAAGCAGTACGGAGGTGGTCAGGGCGAAGATATGACTGCCTTCCCCGCCTTCAAGTTCGAGGAGCCCAAAATTGATCCGATCAATTCCAGCGCTTGAATGGTGACCGGTCATCTAAAAGCAGGCATCTTTAAATAGGAAATAACATTATCACTGCTCTTGAAACAG ] [+] EMBL BM580375 [ ccgCAAAATCTTCTAGCATCTGTTCTCGAAGCGATAAGGACGATTCCGTGAATTAAATAAACCGAAGATGCTGACCAACCAGATTCTATCCGCTGCCCGGATTGTTGGACTGCAGACTCGCCGTAATTACGGTGTCTCTGCTGTACTGCTGGCTAAGGCAAGCGATCCAATCCAGCAGCTGTTCGTGACCAAACTCCGTGAATACGCACAGAAGAGCCAGAGCGCTGGTGGCAAACTAGTTGATGCTACACCGGAAATCCAGCGTGAATTGAAGCAAGAGATGGAGAAACTGGCCAAGCAGTACGGAGGTGGTCAGGGCGAAGATATGACTGCCTTCCCCGCCTTCAAGTTCGAGGAGCCCAAAATTGATCCGATCAATTCCAGCGCTTGAATGGTGCCCGGTCATCTAAAAGCAGGCATCTTTAAATAGGAAATAACATTATCACTGCTTCTGAAACAGATGTAAAATAACGT] [+] EMBL BM609886 [ ccgCAAAATCTTCTAGCATCTGTTCTCGAAGCGATAAGGACGATTCCGTGAATTAAATAAACCGAAGATGCTGACCAACCAGATTCTATCCGCTGCCCGGATTGTTGGACTGCAGACTCGCCGTAATTACGGTGTCTCTGCTGTACTGCTGGCTAAGGCAAGCGATCCAATCCAGCAGCTGTTCGTGACCAAACTCCGTGAATACGCACAGAAGAGCCAGAGCGCTGGTGGCAAACTAGTTGATGCTACACCGGAAATCCAGCGTGAATTGAAGCAAGAGATGGAGAAACTGGCCAAGCAGTACGGAGGTGGTCAGGGCGAAGATATGACTGCCTTCCCCGCCTTCAAGTTCGAGGAGCCCAAAATTGATCCGATCAATTCCAGCGCTTGAATGGTGCCCGGTCATCTAAAAGCAGGCATCTTTAAATAGGAAATAACATTATCACT ] [+] EMBL BM578629 [ ccgGCATCTGTTCTCGAAGCGATAAGGACGATTCCGTGAATTAAATAAACCGAAGATGCTGACCAACCAGATTCTATCCGCTGCCCGGATTGTTGGACTGCAGACTCGCCGTAATTACGGTGTCTCTGCTGTACTGCTGGCTAAGGCAAGCGATCCAATCCAGCAGCTGTTCGTGACCAAACTCCGTGAATACGCACAGAAGAGCCAGAGCGCTGGTGGCAAACTAGTTGATGCTACACCGGAAATCCAGCGTGAATTGAAGCAAGAGATGGAGAAACTGGCCAAGCAGTACGGAGGTGGTCAGGGCGAAGATATGACTGCCTTCCCCGCCTTCAAGTTCGAGGAGCCCAAAATTGATCCGATCAATTCCAGCGCTTGAATGGTGCCCGGTCATCTAAAAGCAGGCATCTTTAAATAGGAAATAA ] [+] EMBL BM629188 [ ccgTGTTCTCGAAGCGATAAGGACGATTCCGTGAATTAAATAAACCGAAGATGCTGACCAACCAGATTCTATCCGCTGCCCGGATTGTTGGACTGCAGACTCGCCGTAATTACGGTGTCTCTGCTGTACTGCTGGCTAAGGCAAGCGATCCAATCCAGCAGCTGTTCGTGACCAAACTCCGTGAATACGCACAGAAGAGCCAGAGCGCTGGTGGCAAACTAGTTGATGCTACACCGGAAATCCAGCGTGAATTGAAGCAAGAGATGGAGAAACTGGCCAAGCAGTACGGAGGTGGTCAGGGCGAAGATATGACTGCCTTCCCCGCCTTCAAGTTCGAGGAGCCCAAAATTGATCCGATCAATTCCAGCGCTTGAATGGTGCCCGGTCATCTAAAAGCAGGCATCTTTAAATAGGAAATAACATTATCACTGCTCTTG ] [+] EMBL BM600548 [ ccgCTCGAAGCGATAAGGACGATTCCGTGAATTAAATAAACCGAAGATGCTGACCAACCAGATTCTATCCGCTGCCCGGATTGTTGGACTGCAGACTCGCCGTAATTACGGTGTCTCTGCTGTACTGCTGGCTAAGGCAAGCGATCCAATCCAGCAGCTGTTCGTGACCAAACTCCGTGAATACGCACAGAAGAGCCAGAGCGCTGGTGGCAAACTAGTTGATGCTACACCGGAAATCCAGCGTGAATTGAAGCAAGAGATGGAGAAACTGGCCAAGCAGTACGGAGGTGGTCAGGGCGAAGATATGACTGCCTTCCCCGCCTTCAAGTTCGAGGAGCCCAAAATTGATCCGATCAATTCCAGCGCTTGAATGGTGCCCGGTCATCTAAAAGCAGGCATCTTTAAATAGGAAATAACATTATCACTGCTCTTGAAACAGATGT ] [+] EMBL BM652607 [ ccgGGACGATTCCGTGAATTAAATAAACCGAAGATGCTGACCAACCAGATTCTATCCGCTGCCCGGATTGTTGGACTGCAGACTCGGCGTAATTACGGTGTCTCTGCTGTACTGCTGGCTAAGGCAAGCGATCCAATCCAGCAGCTGTTCGTGACCAAACTCCGTGAATACGCACAGAAGAGCCAGAGCGCTGGTGGCAAACTAGTTGATGCTACACCGGAAATCCAGCGTGAATTGAAGCAAGAGATGGAGAAACTGGCCAAGCAGTACGGAGGTGGTCAGGGCGAAGATATGACTGCCTTCCCCGCCTTCAAGTTCGAGGAGCCCAAAATTGATCCGATCAATTCCAGCGCTTGAATGGTGCCCGGTCATCTAAAAGCAGGCATCTTTAAATAGGAAATAACATTATCACTGCTCTTGAAACAGATGT ] [+] EMBL BM618554 [ ccgGGACGATTCCGTGAATTAAATAAACCGAAGATGCTGACCAACCAGATTCTATCCGCTGCCCGGATTGTTGGACTGCAGACTCGCCGTAATTACGGTGTCTCTGCTGTACTGCTGGCTAAGGCAAGCGATCCAATCCAGCAGCTGTTCGTGACCAAACTCCGTGAATACGCACAGAAGAGCCAGAGCGCTGGTGGCAAACTAGTTGATGCTACACCGGAAATCCAGCGTGAATTGAAGCAAGAGATGGAGAAACTGGCCAAGCAGTACGGAGGTGGTCAGGGCGAAGATATGACTGCCTTCCCCGCCTTCAAGTTCGAGGAGCCCAAAATTGATCCGATCAATTCCAGCGCTTGAATGGTGCCCGGTCATCTAAAAGCAGGCATCTTTAAATAGGAAATAACATTATCACTGCTCTTGAAACAGATGT ] [+] EMBL BM607993 [ ccgGGACGATTCCGTGAATTAAATAAACCGAAGATGCTGACCAACCAGATTCTATCCGCTGCCCGGATTGTTGGACTGCAGACTCGCCGTAATTACGGTGTCTCTGCTGTACTGCTGGCTAAGGCAAGCGATCCAATCCAGCAGCTGTTCGTGACCAAACTCCGTGAATACGCACAGAAGAGCCAGAGCGCTGGTGGCAAACTAGTTGATGCTACACCGGAAATCCAGCGTGAATTGAAGCAAGAGATGGAGAAACTGGCCAAGCAGTACGGAGGTGGTCAGGGCGAAGATATGACTGCCTTCCCCGCCTTCAAGTTCGAGGAGCCCAAAATTGATCCGATCAATTCCAGCGCTTGAATGGTGCCCGGTCATCTAAAAGCAGGCATCTTTAAATAGGAAATAACATTATCACTGCTCTTGAAACAGATGT ] [+] EMBL BM579818 [ ccgCGATTCCGTGAATTAAATAAACCGAAGATGCTGACCAACCAGATTCTATCCGCTGCCCGGATTGTTGGACTGCAGACTCGCCGTAATTACGGTGTCTCTGCTGTACTGCTGGCTAAGGCAAGCGATCCAATCCAGCAGCTGTTCGTGACCAAACTCCGTGAATACGCACAGAAGAGCCAGAGCGCTGGTGGCAAACTAGTTGATGCTACACCGGAAATCCAGCGTGAATTGAAGCAAGAGATGGAGAAACTGGCCAAGCAGTACGGAGGTGGTCAGGGCGAAGATATGACTGCCTTCCCCGCCTTCAAGTTCGAGGAGCCCAAAATTGATCCGATCAATTCCAGCGCTTGAATGGTGCCCGGTCATCTAAAAGCAGGCATCTTTAAATAGGAAATAACATTATCACTGCTCTTGAAACAGATGT ] [+] EMBL BM632611 [ ccgGGAGCCCAAAATTGATCCGATCAATTCCAGCGCTTGAATGGTGCCCGGTCATCTAAAAGCAGGCATCTTTAAATAGGAAATAACATTATCACTGCTCTTGAAACAGATGTAAAATAACtt] consensusID : consensus_9999#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 463 fasta sequence [CCGCCCACGCGTCCG-------GTTCTCGAAGCGATAAGGACGATTCCGTGAATTAAATAAACCGAAGATGCTGACCAACCAGATTCTATCCGCTGCCCGGATTGTTGGACTGCAGACTCGCCGTAATTACGGTGTCTCTGCTGTACTGCTGGCTAAGGCAAGCGATCCAATCCAGCAGCTGTTCGTGACCAAACTCCGTGAATACGCACAGAAGAGCCAGAGCGCTGGTGGCAAACTAGTTGATGCTACACCGGAAATCCAGCGTGAATTGAAGCAAGAGATGGAGAAACTGGCCAAGCAGTACGGAGGTGGTCAGGGCGAAGATATGACTGCCTTCCCCGCCTTCAAGTTCGAGGAGCCCAAAATTGATCCGATCAATTCCAGCGCTTGAATGGTGCCCGGTCATCTAAAAGCAGGCATCTTTAAATAGGAAATAACATTATCACTGCTTCTGAAACAGATGTACGAT] [+] EMBL BM579796 [CCGCCCACGCGTCCG GTTCTCGAAGCGATAAGGACGATTCCGTGAATTAAATAAACCGAAGATGCTGACCAACCAGATTCTATCCGCTGCCCGGATTGTTGGACTGCAGACTCGCCGTAATTACGGTGTCTCTGCTGTACTGCTGGCTAAGGCAAGCGATCCAATCCAGCAGCTGTTCGTGACCAAACTCCGTGAATACGCACAGAAGAGCCAGAGCGCTGGTGGCAAACTAGTTGATGCTACACCGGAAATCCAGCGTGAATTGAAGCAAGAGATGGAGAAACTGGCCAAGCAGTACGGAGGTGGTCAGGGCGAAGATATGACTGCCTTCCCCGCCTTCAAGTTCGAGGAGCCCAAAATTGATCCGATCAATTCCAGCGCTTGAATGGTGCCCGGTCATCTAAAAGCAGGCATCTTTAAATAGGAAATAACATTATCACTGCTTCTGAAACAGA ] [+] EMBL BM628000 [CCGCCCACGCGTCCG CGAAGCGATAAGGGCGATTCCGTAAATTAAATAAACCGAAGATGCTGACCAACCAGATTCTATCCGCTGCCCGGATTGTTGGACTGCAGACTCGCCGTAATTACGGTGTCTCCGCTGTACTGCTGGCTAAGGCAAGCGATCCAATCCAGCAGCTGTTCGTGACCAAACTCCGTGAATACGCACAGAAGAGCCAGAGCGCTGGTGGCAAACTAGTTGATGCTACACCGGAAATCCAGCGTGAATTGAAGCAAGAGATGGAGAAACTGGCCAAGCAGTACGGAGGTGGTCAGGGCGAAGATATGACTGCCTTCCCCGCCTTCAAGTTCGAGGAGCCCAAAATTGATCCGATCAATTCCAGCGCTTGAATGGTGCCCGGTCATCTAAAAGCAGGCATCTTTAAATAGGAAATAACATTATCACTGCTTCTG ] [+] EMBL BM609822 [CCGCCCACGCGTCCGAGCATCTGTTCTCGAAGCGATAAGGACGATTCCGTGAATTAAATAAACCGAAGATGCTGACCAACCAGATTCTATCCGCTGCCCGGATTGTTGGACTGCAGACTCGCCGTAATTACGGTGTCTCTGCTGTACTGCTGGCTAAGGCAAGCGATCCAATCCAGCAGCTGTTCGTGACCAAACTCCGTGAATACGCACAGAAGAGCCAGAGCGCTGGTGGCAAACTAGTTGATGCTACACCGGAAATCCAGCGTGAATTGAAGCAAGAGATGGAGAAACTGGCCAAGCAGTACGGAGGTGGTCAGGGCGAAGATATGACTGCCTTCCCCGCCTTCAAGTTCGAGGAGCCCAAAATTGATCCGATCAATTCCAGCGCTTGAATGGTGCCCGGTCATCTAAAAGCAGGCATCTTTAAATAGGAAA ] [+] EMBL BM632964 [ ccgGCGATAAGGACGATTCCGTGAATTAAATAAACCGAAGATGCTGACCAACCAGATTCTATCCGCTGCCCGGATTGTTGGACTGCAGACTCGCCGTAATTACGGTGTCTCTGCTGTACTGCTGGCTAAGGCAAGCGATCCAATCCAGCAGCTGTTCGTGACCAAACTCCGTGAATACGCACAGAAGAGCCAGAGCGCTGGTGGCAAACTAGTTGATGCTACACCGGAAATCCAGCGTGAATTGAAGCAAGAGATGGAGAAACTGGCCAAGCAGTACGGAGGTGGTCAGGGCGAAGATATGACTGCCTTCCCCGCCTTCAAGTTCGAGGAGCCCAAAATTGATCCGATCAATTCCAGCGCTTGAATGGTGCCCGGTCATCTAAAAGCAGGCATCTTTAAATAGGAAATAACATTATCACTGCTTCTGAAACAGATGTACG ] [+] EMBL BM639471 [ ccgGCGATAAGGACGATTCCGTGAATTAAATAAACCGAAGATGCTGACCAACCAGATTCTATCCGCTGCCCGGATTGTTGGACTGCAGACTCGCCGTAATTACGGTGTCTCTGCTGTACTGCTGGCTAAGGCAAGCGATCCAATCCAGCAGCTGTTCGTGACCAAACTCCGTGAATACGCACAGAAGAGCCAGAGCGCTGGTGGCAAACTAGTTGATGCTACACCGGAAATCCAGCGTGAATTGAAGCAAGAGATGGAGAAACTGGCCAAGCAGTACGGAGGTGGTCAGGGCGAAGATATGACTGCCTTCCCCGCCTTCAAGTTCGAGGAGCCCAAAATTGATCCGATCAATTCCAGCGCTTGAATGGTGCCCGGTCATCTAAAAGCAGGCATCTTTAAATAGGAAATAACATTATCACTGCTTCTGAAACAGATGT ] [+] EMBL BM636996 [ ccgCGATTCCGTGAATTAAATAAACCGAAGATGCTGACCAACCAGATTCTATCCGCTGCCCGGATTGTTGGACTGCAGACTCGCCGTAATTACGGTGTCTCTGCTGTACTGCTGGCTAAGGCAAGCGATCCAATCCAGCAGCTGTTCGTGACCAAACTCCGTGAATACGCACAGAAGAGCCAGAGCGCTGGTGGCAAACTAGTTGATGCTACACCGGAAATCCAGCGTGAATTGAAGCAAGAGATGGAGAAACTGGCCAAGCAGTACGGAGGTGGTCAGGGCGAAGATATGACTGCCTTCCCCGCCTTCAAGTTCGAGGAGCCCAAAATTGATCCGATCAATTCCAGCGCTTGAATGGTGCCCGGTCATCTAAAAGCAGGCATCTTTAAATAGGAAATAACATTATCACTGCTTCTGAAACAGATGTAaaat] consensusID : consensus_9999#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 446 fasta sequence [CCGCCCACGCGTCCGCAAAATCTTCTAGCATCTGTTCTCGAAGCGATAAGGACGATTCCGTGAATTAAATAAACCGAAGATGCTGACCAACCAGATTCTATCCGCTGCCCGGATTGTTGGACTGCAGACTCGCCGTAATTACGGTGTCTCTGCTGTACTGCTGGCTAAGGCAAGCGATCCAATCCAGCAGCTGTTCGTGACCAAACTCCGTGAATACGCACAGAAGAGCCAGAGCGCTGGTGGCAAACTAGTTGATGCTACACCGGAAATCCAGCGTGAATTGAAGCAAGAGATGGAGAAACTGGCCAAGCAGTACGGAGGTGGTCAGGGCGAAGATATGACTGCCTTCCCCGCCTTCAAGTTCGAGGAGCCCAAAATTGATCCGATCAATTCCAGCGCTTGAATGGTGCCCGGTCATCTAAAAGCAGGCATCTTTAAATAGGAAA] [+] EMBL BM578537 [CCGCCCACGCGTCCGCAAAATCTTCTAGCATCTGTTCTCGAAGCGATAAGGACGATTCCGTGAATTAAATAAACCGAAGATGCTGACCAACCAGATTCTATCCGCTGCCCGGATTGTTGGACTGCAGACTCGCCGTAATTACGGTGTCTCTGCTGTACTGCTGGCTAAGGCAAGCGATCCAATCCAGCAGCTGTTCGTGACCAAACTCCGTGAATACGCACAGAAGAGCCAGAGCGCTGGTGGCAAACTAGTTGATGCTACACCGGAAATCCAGCGTGAATTGAAGCAAGAGATGGAGAAACTGGCCAAGCAGTACGGAGGTGGTCAGGGCGAAGATATGACTGCCTTCCCCGCCTTCAAGTTCGAGGAGCCCAAAATTGATCCGATCAATTCCAGCGCTTGAATGGTGCCCGGTCATCTAAAAGCAGGCATCTTTAAATAGGAAA] [+] EMBL BM576617 [ ccGGACGATTCCGTGAATTAAATAAACCGAAGATGCTGACCAACCAGATTCTATCCGCTGCCCGGATTGTTGGACTGCAGACTCGCCGTAATTACGGTGTCTCTGCTGTACTGCTGGCTAAGGCAAGCGATCCAATCCAGCAGCTGTTCGTGACCAAACTCCGTGAATACGCACAGAAGAGCCAGAGCGCTGGTGGCAAACTAGTTGATGCTACACCGGAAATCCAGCGTGAATTGAAGCAAGAGATGGAGAAACTGGCCAAGCAGTACGGAGGTGGTCAGGGCGAAGATATGACTGCCTTCCCCGCCTTCAAGTTCGAGGAGCCCAAAATTGATCCGATCAATTCCAGCGCTTGAATGGTGCCCGGTCATCTAAAAGCAGGCATCTTTAAATAGGAA ] [+] EMBL BM601403 [ ACCAAACTCCGTGAATACGCACAGAAGAGCCAGAGCGCTGGGGGCAAACTAGTTGATGCTACACCGGAAATCCAGCGTGAATTGAAGCAAGAGATGGAGAAACTGGCCAAGCAGTACGGAGGTGGTCAGGGCGAATATATGACTGCCTTCCCCGCCTTCAAGTTCGAGGAGCCCAAAATTGATCCGATCAATTCCAGCGCTTGAATGGTGCCCGGTCATCTAAAAGCAGGCATCTTTAAATAG ] consensusID : consensus_9999#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 410 fasta sequence [GACCCACGCGTCCGGACGATTCCGTGAATTAAATAAACCGAAGATGCTGACCAACCAGATTCTATCCGCTGCCCGGATTGTTGGACTGCAGACTCGCCGTAATTACGGTGTCTCTGCTGTACTGCTGGCTAAGGCAAGCGATCCAATCCAGCAGTTGTTCGTGACCAAACTCCGTGAATACGCACAGAAGAGCCAGAGCGCTGGTGGCAAACTAGTTGATGCTACACCGGAAATCCAGCGTGAATTGAAGCAAGAGATGGAGAAACTGGCCAAGCAGTACGGAGGTGGTCATGGCGAACATATGACTGCCTTCCCCGCCTTCAAGTTCGAGGAGCCCAAAATTGATCCGATCAATTCCAGCGCTTGAATGGTGCCCGGTCATCTAAAAGCAGGCATCTTTAAATAGGAAA] [+] EMBL BM622203 [GACCCACGCGTCCGGACGATTCCGTGAATTAAATAAACCGAAGATGCTGACCAACCAGATTCTATCCGCTGCCCGGATTGTTGGACTGCAGACTCGCCGTAATTACGGTGTCTCTGCTGTACTGCTGGCTAAGGCAAGCGATCCAATCCAGCAGTTGTTCGTGACCAAACTCCGTGAATACGCACAGAAGAGCCAGAGCGCTGGTGGCAAACTAGTTGATGCTACACCGGAAATCCAGCGTGAATTGAAGCAAGAGATGGAGAAACTGGCCAAGCAGTACGGAGGTGGTCATGGCGAACATATGACTGCCTTCCCCGCCTTCAAGTTCGAGGAGCCCAAAATTGATCCGATCAATTCCAGCGCTTGAATGGTGCCCGGTCATCTAAAAGCAGGCATCTTTAAATAGGAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9999#1 -----------------------------CCGCCCACGCGTCCGGTTCTCGAAGCGATAA 31 consensus_9999#3 ----------------------------------------------GACCCACGCG-TCC 13 consensus_9999#0 CCGCCCAAGATTTTCTCGACATCC-CAAAATCTTCTAGCATCTG-TTCTCGAAGCGATAA 58 consensus_9999#2 ----------CCGCCCACGCGTCCGCAAAATCTTCTAGCATCTG-TTCTCGAAGCGATAA 49 * * *** * consensus_9999#1 GGACGATTCCGTGAATTAAATAAACCGAAGATGCTGACCAACCAGATTCTATCCGCTGCC 91 consensus_9999#3 GGACGATTCCGTGAATTAAATAAACCGAAGATGCTGACCAACCAGATTCTATCCGCTGCC 73 consensus_9999#0 GGACGATTCCGTGAATTAAATAAACCGAAGATGCTGACCAACCAGATTCTATCCGCTGCC 118 consensus_9999#2 GGACGATTCCGTGAATTAAATAAACCGAAGATGCTGACCAACCAGATTCTATCCGCTGCC 109 ************************************************************ consensus_9999#1 CGGATTGTTGGACTGCAGACTCGCCGTAATTACGGTGTCTCTGCTGTACTGCTGGCTAAG 151 consensus_9999#3 CGGATTGTTGGACTGCAGACTCGCCGTAATTACGGTGTCTCTGCTGTACTGCTGGCTAAG 133 consensus_9999#0 CGGATTGTTGGACTGCAGACTCGCCGTAATTACGGTGTCTCTGCTGTACTGCTGGCTAAG 178 consensus_9999#2 CGGATTGTTGGACTGCAGACTCGCCGTAATTACGGTGTCTCTGCTGTACTGCTGGCTAAG 169 ************************************************************ consensus_9999#1 GCAAGCGATCCAATCCAGCAGCTGTTCGTGACCAAACTCCGTGAATACGCACAGAAGAGC 211 consensus_9999#3 GCAAGCGATCCAATCCAGCAGTTGTTCGTGACCAAACTCCGTGAATACGCACAGAAGAGC 193 consensus_9999#0 GCAAGCGATCCAATCCAGCAGCTGTTCGTGACCAAACTCCGTGAATACGCACAGAAGAGC 238 consensus_9999#2 GCAAGCGATCCAATCCAGCAGCTGTTCGTGACCAAACTCCGTGAATACGCACAGAAGAGC 229 ********************* ************************************** consensus_9999#1 CAGAGCGCTGGTGGCAAACTAGTTGATGCTACACCGGAAATCCAGCGTGAATTGAAGCAA 271 consensus_9999#3 CAGAGCGCTGGTGGCAAACTAGTTGATGCTACACCGGAAATCCAGCGTGAATTGAAGCAA 253 consensus_9999#0 CAGAGCGCTGGTGGCAAACTAGTTGATGCTACACCGGAAATCCAGCGTGAATTGAAGCAA 298 consensus_9999#2 CAGAGCGCTGGTGGCAAACTAGTTGATGCTACACCGGAAATCCAGCGTGAATTGAAGCAA 289 ************************************************************ consensus_9999#1 GAGATGGAGAAACTGGCCAAGCAGTACGGAGGTGGTCAGGGCGAAGATATGACTGCCTTC 331 consensus_9999#3 GAGATGGAGAAACTGGCCAAGCAGTACGGAGGTGGTCATGGCGAACATATGACTGCCTTC 313 consensus_9999#0 GAGATGGAGAAACTGGCCAAGCAGTACGGAGGTGGTCAGGGCGAAGATATGACTGCCTTC 358 consensus_9999#2 GAGATGGAGAAACTGGCCAAGCAGTACGGAGGTGGTCAGGGCGAAGATATGACTGCCTTC 349 ************************************** ****** ************** consensus_9999#1 CCCGCCTTCAAGTTCGAGGAGCCCAAAATTGATCCGATCAATTCCAGCGCTTGAATGGTG 391 consensus_9999#3 CCCGCCTTCAAGTTCGAGGAGCCCAAAATTGATCCGATCAATTCCAGCGCTTGAATGGTG 373 consensus_9999#0 CCCGCCTTCAAGTTCGAGGAGCCCAAAATTGATCCGATCAATTCCAGCGCTTGAATGGTG 418 consensus_9999#2 CCCGCCTTCAAGTTCGAGGAGCCCAAAATTGATCCGATCAATTCCAGCGCTTGAATGGTG 409 ************************************************************ consensus_9999#1 CCCGGTCATCTAAAAGCAGGCATCTTTAAATAGGAAATAACATTATCACTGCTTCTGAAA 451 consensus_9999#3 CCCGGTCATCTAAAAGCAGGCATCTTTAAATAGGAAA----------------------- 410 consensus_9999#0 CCCGGTCATCTAAAAGCAGGCATCTTTAAATAGGAAATAACATTATCACTGCTCTTGAAA 478 consensus_9999#2 CCCGGTCATCTAAAAGCAGGCATCTTTAAATAGGAAA----------------------- 446 ************************************* consensus_9999#1 CAGATGTACGAT----- 463 consensus_9999#3 ----------------- consensus_9999#0 CAGATGTAAAATAACGT 495 consensus_9999#2 ----------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||