These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1019#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 477 fasta sequence [GCAAGAGTATCGAGAACGTTGCATACAATTAAGGAACAATCACACAGTGTACCGCTTCAACGAGCCGCACGAAGCGAAACACGGATCGAGGGGGAGGGAAGGAGTAAGGAATAAGGCGGGAGAAAGAGAGAGAGAGAGAGAGAGAAGGGAGGGAGAAGAGGAATTCTTGGCTGGTTCGAGTCGAACAACGTGTAGCGGATCTTCTACGCAGGTATACAAGTAAGTACGTACGTGCGGGTCGCGTGTAGGGATACTCACGTAATGTAGGCCCGTTCCAGGAGATACCGTAAGACCTTGCTGTTACGTCACTAGAAGCCACGTGATTAGGAGAAAAAGGATACCGGCGAGAAGGGAGACGAGAAAACGGAAACTCTGCCCTCGGGCTGAAGAACACGCTTCGTGCCGCTCCGTTCTTCGAAATTTGTAAATAATCAGGGCACAAGGGTCGAAAATGATTATCCAGCTGTTCCATGCTGA] [+] EMBL BI512058 [GCAAGAGTATCGAGAACGTTGCATACAATTAAGGAACAATCACACAGTGTACCGCTTCAACGAGCCGCACGAAGCGAAACACGGATCGAGGGGGAGGGAAGGAGTAAGGAATAAGGCGGGAGAAAGAGAGAGAGAGAGAGAGAGAAGGGAGGGAGAAGAGGAATTCTTGGCTGGTTCGAGTCGAACAACGTGTAGCGGATCTTCTACGCAGGTATACAAGTAAGTACGTACGTGCGGGTCGCGTGTAGGGATACTCACGTAATGTAGGCCCGTTCCAGGAGATACCGTAAGACCTTGCTGTTACGTCACTAGAAGCCACGTGATTAGGAGAAAAAGGATACCGGCGAGAAGGGAGACGAGAAAACGGAAACTCTGCCCTCGGGCTGAAGAACACGCTTCGTGCCGCTCCGTTCTTCGAAATTTGTAAATAATCAGGGCACAAGGGTCGAAAATGATTATCCAGCTGTTCCATGCTGA] consensusID : consensus_1019#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 334 fasta sequence [TTTTTTTTTTTGAATACTATTCTGTTTTCGAAATTTGATTGAATTGCAAAAATTTATAAATGCAACGCTCCTTTAATCTTTCCCCCTTTCGGTAATTTTTTTTCCTCTTTTAATCAATCCTTCCCTTTCCTAAATTTCAAAATAGTTGAAACAGTTTGGAAAAAATATAATTTTAAAATTCTCCTTTTAAGCTGAAAATTTGTTTAACGCCAATTTAAGTGGAGTTGGAGCTTTTTTAATATAAAATAATTGCAATTAACGGAACAGTGGTTCCAACCATTTTCAGAATCAGGGCACAAGGGTCGAAAATGATTATCCAGCTGTTCCATGCTGA] [+] EMBL BI508756 [TTTTTTTTTTTGAATACTATTCTGTTTTCGAAATTTGATTGAATTGCAAAAATTTATAAATGCAACGCTCCTTTAATCTTTCCCCCTTTCGGTAATTTTTTTTCCTCTTTTAATCAATCCTTCCCTTTCCTAAATTTCAAAATAGTTGAAACAGTTTGGAAAAAATATAATTTTAAAATTCTCCTTTTAAGCTGAAAATTTGTTTAACGCCAATTTAAGTGGAGTTGGAGCTTTTTTAATATAAAATAATTGCAATTAACGGAACAGTGGTTCCAACCATTTTCAGAATCAGGGCACAAGGGTCGAAAATGATTATCCAGCTGTTCCATGCTGA] consensusID : consensus_1019#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 258 fasta sequence [TGCTGTTACGTCACTAGAAGCCACGTGATTAGGAGAAAAAGGATACCGGCGAGAAGGGAGACGAGAAAACGGAAACTCTGCCCTCGGGCTGAAGAACACGCTTCGTGCCGCTCCGTTCTTCGAAATTTGTAAATGTATAATTTCTTTCTTAATCTTTCTTTTTTCTTTCCTCTTCAGTTTCTTATTTTTGTTACGTAAATTTGAAATTTGAAATTAGATTCATTTTTTATCTTTCGAGACTGTTTAACTTTCTCGAAA] [+] EMBL BI513525 [TGCTGTTACGTCACTAGAAGCCACGTGATTAGGAGAAAAAGGATACCGGCGAGAAGGGAGACGAGAAAACGGAAACTCTGCCCTCGGGCTGAAGAACACGCTTCGTGCCGCTCCGTTCTTCGAAATTTGTAAATGTATAATTTCTTTCTTAATCTTTCTTTTTTCTTTCCTCTTCAGTTTCTTATTTTTGTTACGTAAATTTGAAATTTGAAATTAGATTCATTTTTTATCTTTCGAGACTGTTTAACTTTCTCGAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1019#0 GCAAGAGTATCGAGAACGTTGCATACAATTAAGGAACAATCACACAGTGTACCGCTTCAA 60 consensus_1019#2 ------------------------------------------------------------ consensus_1019#1 ------------------------------------------------------------ consensus_1019#0 CGAGCCGCACGAAGCGAAACACGGATCGAGGGGGAGGGAAGGAGTAAGGAATAAGGCGGG 120 consensus_1019#2 ------------------------------------------------------------ consensus_1019#1 ------------------------------------------------------------ consensus_1019#0 AGAAAGAGAGAGAGAGAGAGAGAGAAGGGAGGGAGAAGAGGAATTCTTGGCTGGTTCGAG 180 consensus_1019#2 ------------------------------------------------------------ consensus_1019#1 ------------------------------------------------------------ consensus_1019#0 TCGAACAACGTGTAGCGGATCTTCTACGCAGGTATACAAGTAAGTACGTACGTGCGGGTC 240 consensus_1019#2 ------------------------------------------------------------ consensus_1019#1 ------TTTTTTTTTTTGAATACTATTCTGTTTTCGAAATTTGATTGAATTGCAAAAATT 54 consensus_1019#0 GCGTGTAGGGATACTCACGTAATGTAGGCCCGTTCCAGGAGATACCGTAAGACCTTGCTG 300 consensus_1019#2 -------------------------------------------------------TGCTG 5 consensus_1019#1 TATAAATGCAACGCTCCTTTAATCTTTCCCCCTTTCGGTAATTTTTTTTC--CTCTTTTA 112 * * consensus_1019#0 TTACGTCACTAGAAGCCACGTGATTAGGAGAAAAAGGATACCGGCGAGAAGGGAGACGAG 360 consensus_1019#2 TTACGTCACTAGAAGCCACGTGATTAGGAGAAAAAGGATACCGGCGAGAAGGGAGACGAG 65 consensus_1019#1 ATCAATC-CTTCCCTTTCCTAAATTTCAAAATAGTTGAAACAGTTTGGAAAAAATAT--- 168 * ** ** * *** * * * ** ** * *** * * consensus_1019#0 AAAACGGAAACTCTGCCCTCGGGCTGAAGAACACGCTTCGTGCCGCTCCGTTC----TTC 416 consensus_1019#2 AAAACGGAAACTCTGCCCTCGGGCTGAAGAACACGCTTCGTGCCGCTCCGTTC----TTC 121 consensus_1019#1 AATTTTAAAATTCTCCTTTTAAGCTGAA-AATTTGTTTAACGCCAATTTAAGTGGAGTTG 227 ** *** *** * * ****** ** * ** *** * ** consensus_1019#0 GAAATTTGTAAAT----AATCAGGGCACAAGGGTCGAAAATGATTATCCAGCT--GTTCC 470 consensus_1019#2 GAAATTTGTAAATGTATAATTTCTTTCTTAATCTTTCTTTTTTCTTTCCTCTTCAGTTTC 181 consensus_1019#1 GAGCTTTTTTAAT--ATAAAATAATTGCAATTAACGGAACAGTGGTTCCAACC-ATTTTC 284 ** *** * *** ** * *** ** * consensus_1019#0 ATGCTGA----------------------------------------------------- 477 consensus_1019#2 TTATTTTTGTTACGTAAATTTGAAATTTGAAATTAGATTCATTTTTTATCTTTCGAGACT 241 consensus_1019#1 AGAATCAGGGCACAAGGGTCGAAAATGATTATCCAGCTGTTCCATGCTGA---------- 334 * consensus_1019#0 ----------------- consensus_1019#2 GTTTAACTTTCTCGAAA 258 consensus_1019#1 ----------------- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |