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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1029#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 976 fasta sequence
[TTCCATCGTTCCTTCTCTCATTCGATCGTTTCTTCTATTTTTCTCCGTCCACTCATGTACACATACACATATATACATATTTTTTTTTTAACTTTACCATTATTTTTTATGTTTTCTTTCTCTTCCCTCTCTCTCTTTCTCTCTCTTAATGATCGCGTATAAGTAAATAAATACTTAAGTACTAATGCCAATAATTTTTCGGTAGATTTCGATAATTTTAAATTATTATTATTACAATTAAGTTGAATAGTCGGAGATTGAGCATTGCTCGATGGTGCATTATGGTAATGTTACAATATTCGATCAATCTATATATAATTTAACAATAATGGCGAAGTAAAACTGTCGTTTAATCCTCCTTCGATTACGATACTCTGTCAAATTTATAAATCGATTTCAATTGATCGCGATAGAAGACCATTTTCTAATATTGAGATCGCGATCCGAGTTTCTGTGGGGCAAACAAGGATTCGATGTCTTGGAACATTCAAATTTCTCTGCGCTGCAACCGATGCATTTATTACAGCTGCATTGCATACCTTCGGCACAAATACCAAGATAGTTTTGCGGTCCTCCGCACAATTCATCGGGCCCCTGGAGAAATAAATGTAGAATTATAAATGTAGAAAATGTAGTGAAATGTTGTAACTCGATCGATTTCTAACTACTATTGATTAATTATTAATATGAAAACATAGATTCATTACTTAATACTCGCCTTTGCGCATTGCACAATGCCGCAAGCGCTCGACATCGCAATACCGTATTTGCATTTATGGCAAGAATCACCACATCCTAAGCAATAAGATGTTGTTCCTTGTCTTATCGATGGATAACCGGAACATTTATCAAACCTGATCAAATCAAGTATATGTACATTATTGTCATGCATTTACCTATAATAATACCATATCAAATTTGTTCGTTTCTCTTTGATCCTCGTTTTTCACACGCGTAATCGATGCATGATACGTAT]
[+] EMBL BI511420 [TTCCATCGTTCCTTCTCTCATTCGATCGTTTCTTCTATTTTTCTCCGTCCACTCATGTACACATACACATATATACATATTTTTTTTTTAACTTTACCATTATTTTTTATGTTTTCTTTCTCTTCCCTCTCTCTCTTTCTCTCTCTTAATGATCGCGTATAAGTAAATAAATACTTAAGTACTAATGCCAATAATTTTTCGGTAGATTTCGATAATTTTAAATTATTATTATTACAATTAAGTTGAATAGTCGGAGATTGAGCATTGCTCGATGGTGCATTATGGTAATGTTACAATATTCGATCAATCTATATATAATTTAACAATAATGGCGAAGTAAAACTGTCGTTTAATCCTCCTTCGATTACGATACTCTGTCAAATTTATAAATCGATTTCAATTGATCGCGATAGAAGACCATTTTCTAATATTGAGATCGCGATCCGAGTTTCTGTGGGGCAAACAAGGATTCGATGTCTTGGAACATTCAAATTTCTCTGCGCTGCAACCGATGCATTTATTACAGC ]
[+] EMBL BI510052 [ CCTTCGATTACGATACTCTGTCAAATTTATAAATCGATTTCAATTGATCGCGATAGAAGACCATTTTCTAATATTGAGATCGCGATCCGAGTTTCTGTGGGGCAAACAAGGATTCGATGTCTTGGAACATTCAAATTTCTCTGCGCTGCAACCGATGCATTTATTACAGCTGCATTGCATACCTTCGGCACAAATACCAAGATAGTTTTGCGGTCCTCCGCACAATTCATCGGGCCCCTGGAGAAATAAATGTAGAATTATAAATGTAGAAAATGTAGTGAAATGTTGTAACTCGATCGATTTCTAACTACTATTGATTAATTATTAATATGAAAACATAGATTCATTACTTAATACTCGCCTTTGCGCATTGCACAATGCCGCAAGCGCTCGACATCGCAATACCGTATTTGCATTTATGGCAAGAATCACCACATCCTAAGCAATAAGATGTTGTTCCTTGTCTTATCGATGGATAACCGGAACATTTATCAAACCTGATCAAATCAAGTATATGTACATTATTGTCATGCATTTACCTATAATAATACCATATCAAATTTGTTCGTTTCTCTTTGATCCTCGTTTTTCACACGCGTAATCGATGCATGATACGTAT]
consensusID : consensus_1029#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 562 fasta sequence
[TTTTTTTTCGATAATTTTAAATTATTATTATTACAATTAAGTTGAATAGTCGGAGATTGAGCATTGCTCGATGGTGCATTATGGTAATGTTACAATATTCGATCAATCTATATATAATTTAACAATAATGGCGAAGTAAAACTGTCGTTTAATCCTCCTTCGATTACGATACTCTGTCAAATTTATAAATCGATTTCAATTGATCGCGATAGAAGACCATTTTCTAATATTGAGATCGCGATCCGAGTTTCTGTGGGGCAAACAAGGATTCGATGTCTTGGAACATTCAAATTTCTCTGCGCTGCAACCGATGCATTTATTACAGCTGCATTGCATACCTTCGGCACAAATACCAAGATAGTTTTGCGGTCCTCCGCACAATTCATCGGGCCCCTTTGCGCATTGCACAATGCCGCAAGCGCTCGACATCGCAATACCGTATTTGCATTTATGGCAAGAATCACCACATCCTAAGCAATAAGATGTTGTTCCTTGTCTTATCGATGGATAACCGGAACATTTATCAAACAGAAAAACAATGGCAAGCAGTACGGCTATGCGG]
[-] EMBL BI505843 [TTTTTTTTCGATAATTTTAAATTATTATTATTACAATTAAGTTGAATAGTCGGAGATTGAGCATTGCTCGATGGTGCATTATGGTAATGTTACAATATTCGATCAATCTATATATAATTTAACAATAATGGCGAAGTAAAACTGTCGTTTAATCCTCCTTCGATTACGATACTCTGTCAAATTTATAAATCGATTTCAATTGATCGCGATAGAAGACCATTTTCTAATATTGAGATCGCGATCCGAGTTTCTGTGGGGCAAACAAGGATTCGATGTCTTGGAACATTCAAATTTCTCTGCGCTGCAACCGATGCATTTATTACAGCTGCATTGCATACCTTCGGCACAAATACCAAGATAGTTTTGCGGTCCTCCGCACAATTCATCGGGCCCCTTTGCGCATTGCACAATGCCGCAAGCGCTCGACATCGCAATACCGTATTTGCATTTATGGCAAGAATCACCACATCCTAAGCAATAAGATGTTGTTCCTTGTCTTATCGATGGATAACCGGAACATTTATCAAACAGAAAAACAATGGCAAGCAGTACGGCTATGCGG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_1029#0 TTCCATCGTTCCTTCTCTCATTCGATCGTTTCTTCTATTTTTCTCCGTCCACTCATGTAC 60
consensus_1029#1 ------------------------------------------------------------
consensus_1029#0 ACATACACATATATACATATTTTTTTTTTAACTTTACCATTATTTTTTATGTTTTCTTTC 120
consensus_1029#1 ------------------------------------------------------------
consensus_1029#0 TCTTCCCTCTCTCTCTTTCTCTCTCTTAATGATCGCGTATAAGTAAATAAATACTTAAGT 180
consensus_1029#1 ------------------------------------------------------------
consensus_1029#0 ACTAATGCCAATAATTTTTCGGTAGATTTCGATAATTTTAAATTATTATTATTACAATTA 240
consensus_1029#1 ---------------------TTTTTTTTCGATAATTTTAAATTATTATTATTACAATTA 39
* **********************************
consensus_1029#0 AGTTGAATAGTCGGAGATTGAGCATTGCTCGATGGTGCATTATGGTAATGTTACAATATT 300
consensus_1029#1 AGTTGAATAGTCGGAGATTGAGCATTGCTCGATGGTGCATTATGGTAATGTTACAATATT 99
************************************************************
consensus_1029#0 CGATCAATCTATATATAATTTAACAATAATGGCGAAGTAAAACTGTCGTTTAATCCTCCT 360
consensus_1029#1 CGATCAATCTATATATAATTTAACAATAATGGCGAAGTAAAACTGTCGTTTAATCCTCCT 159
************************************************************
consensus_1029#0 TCGATTACGATACTCTGTCAAATTTATAAATCGATTTCAATTGATCGCGATAGAAGACCA 420
consensus_1029#1 TCGATTACGATACTCTGTCAAATTTATAAATCGATTTCAATTGATCGCGATAGAAGACCA 219
************************************************************
consensus_1029#0 TTTTCTAATATTGAGATCGCGATCCGAGTTTCTGTGGGGCAAACAAGGATTCGATGTCTT 480
consensus_1029#1 TTTTCTAATATTGAGATCGCGATCCGAGTTTCTGTGGGGCAAACAAGGATTCGATGTCTT 279
************************************************************
consensus_1029#0 GGAACATTCAAATTTCTCTGCGCTGCAACCGATGCATTTATTACAGCTGCATTGCATACC 540
consensus_1029#1 GGAACATTCAAATTTCTCTGCGCTGCAACCGATGCATTTATTACAGCTGCATTGCATACC 339
************************************************************
consensus_1029#0 TTCGGCACAAATACCAAGATAGTTTTGCGGTCCTCCGCACAATTCATCGGGCCCCTGGAG 600
consensus_1029#1 TTCGGCACAAATACCAAGATAGTTTTGCGGTCCTCCGCACAATTCATCGGGCCCCT---- 395
********************************************************
consensus_1029#0 AAATAAATGTAGAATTATAAATGTAGAAAATGTAGTGAAATGTTGTAACTCGATCGATTT 660
consensus_1029#1 ------------------------------------------------------------
consensus_1029#0 CTAACTACTATTGATTAATTATTAATATGAAAACATAGATTCATTACTTAATACTCGCCT 720
consensus_1029#1 ------------------------------------------------------------
consensus_1029#0 TTGCGCATTGCACAATGCCGCAAGCGCTCGACATCGCAATACCGTATTTGCATTTATGGC 780
consensus_1029#1 TTGCGCATTGCACAATGCCGCAAGCGCTCGACATCGCAATACCGTATTTGCATTTATGGC 455
************************************************************
consensus_1029#0 AAGAATCACCACATCCTAAGCAATAAGATGTTGTTCCTTGTCTTATCGATGGATAACCGG 840
consensus_1029#1 AAGAATCACCACATCCTAAGCAATAAGATGTTGTTCCTTGTCTTATCGATGGATAACCGG 515
************************************************************
consensus_1029#0 AACATTTATCAAACCTGATCAAATCAAGTATATGTACATTATTGTCATGCATTTACCTAT 900
consensus_1029#1 AACATTTATCAAAC---AGAAAAACAATGGCAAG--CAGTACGGCTATGCGG-------- 562
************** * *** *** * * ** ** * ****
consensus_1029#0 AATAATACCATATCAAATTTGTTCGTTTCTCTTTGATCCTCGTTTTTCACACGCGTAATC 960
consensus_1029#1 ------------------------------------------------------------
consensus_1029#0 GATGCATGATACGTAT 976
consensus_1029#1 ----------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |