These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1036#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 329 fasta sequence [CGTATAAAATTACTTACGATCGTTATTATAATCTCACTACCACCGTCAAGCTCACCGAGCACGTTCTTGGAAGTGAATAAATGGCATTCAGAAGAAAACGCGCTTCGAGTTCGTGCTTCGATAACCAATTAATTTAGCGGGGAGCAAATATACGATGCATATATATATATATATATACATATATATATATATGTATCGTATAATTTTTCTCCGTATATAGGCACACGTTATACATACGTATAAGCATTATACCTGTATGGAAATGTGTGGACTAGAAATCGAACGTTTGTTACCGCTCGTTAAAATTTTTTTTATCCGCNNNAAAAAAA] [+] EMBL BI512037 [CGTATAAAATTACTTACGATCGTTATTATAATCTCACTACCACCGTCAAGCTCACCGAGCACGTTCTTGGAAGTGAATAAATGGCATTCAGAAGAAAACGCGCTTCGAGTTCGTGCTTCGATAACCAATTAATTTAGCGGGGAGCAAATATACGATGCATATATATATATATATATACATATATATATATATGTATCGTATAATTTTTCTCCGTATATAGGCACACGTTATACATACGTATAAGCATTATACCTGTATGGAAATGTGTGGACTAGAAATCGAACGTTTGTTACCGCTCGTTAAAATTTTTTTTATCCGCNNNAAAAAAA] consensusID : consensus_1036#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 290 fasta sequence [ATAATCTCACTACCACCGTCAAGCTCACCGAGCACGTTCTTGGAAGTGAATAAATGGCATTCAGAAGAAAACGCGCTTCGAGTTCGTGCTTCGATAACCAATTAATTTAGCGAGGAGCAAATATACGATGCATATATATATATACATATATATATGTATCGCATAATTTTTCTCCGTATATAGGCACACGTTATACATACGTATAAGCATTATACCTGTATGGAAATGTGTGGACTAGAAATCGAACGTTTGTTACCGCTCGTTAAAATTTTTTTTATCCGCAAAAAAAA] [+] EMBL BI517166 [ATAATCTCACTACCACCGTCAAGCTCACCGAGCACGTTCTTGGAAGTGAATAAATGGCATTCAGAAGAAAACGCGCTTCGAGTTCGTGCTTCGATAACCAATTAATTTAGCGAGGAGCAAATATACGATGCATATATATATATACATATATATATGTATCGTATAATTTTTCTCCGTATATAGGCACACGTTATACATACGTATAAGCATTATACCTGTATGGAAATGTGTGGACTAGAAATCGAACGTTTGTTACCGCTCGTTAAAATTTTTTTTATCCGCAAAAAAAA] [+] EMBL BI511114 [ GTGAATAAATGGCATTCAGAAGAAAACGCGCTTCGAGTTCGTGCTTCGATAACCAATTAATTTAGCGAGGAGCAAATATACGATGCATATATATATATACATATATATATGTATCGCATAATTTTTCTCCGTATATAGGCACACGTTATACATACGTATAAGCATTATACCTGTATGGAAATGTGTGGACTAGAAATCGAACGTTTGTTACCGCTCGTTAAAATTTTTTTTATCCGCAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1036#0 CGTATAAAATTACTTACGATCGTTATTATAATCTCACTACCACCGTCAAGCTCACCGAGC 60 consensus_1036#1 ---------------------------ATAATCTCACTACCACCGTCAAGCTCACCGAGC 33 ********************************* consensus_1036#0 ACGTTCTTGGAAGTGAATAAATGGCATTCAGAAGAAAACGCGCTTCGAGTTCGTGCTTCG 120 consensus_1036#1 ACGTTCTTGGAAGTGAATAAATGGCATTCAGAAGAAAACGCGCTTCGAGTTCGTGCTTCG 93 ************************************************************ consensus_1036#0 ATAACCAATTAATTTAGCGGGGAGCAAATATACGATGCATATATATATATATATATACAT 180 consensus_1036#1 ATAACCAATTAATTTAGCGAGGAGCAAATATACGATGCATATATATATATACAT------ 147 ******************* ******************************* ** consensus_1036#0 ATATATATATATGTATCGTATAATTTTTCTCCGTATATAGGCACACGTTATACATACGTA 240 consensus_1036#1 ----ATATATATGTATCGCATAATTTTTCTCCGTATATAGGCACACGTTATACATACGTA 203 ************** ***************************************** consensus_1036#0 TAAGCATTATACCTGTATGGAAATGTGTGGACTAGAAATCGAACGTTTGTTACCGCTCGT 300 consensus_1036#1 TAAGCATTATACCTGTATGGAAATGTGTGGACTAGAAATCGAACGTTTGTTACCGCTCGT 263 ************************************************************ consensus_1036#0 TAAAATTTTTTTTATCCGCNNNAAAAAAA 329 consensus_1036#1 TAAAATTTTTTTTATCCGCAAAAAAAA-- 290 ******************* ***** |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |