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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1091#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 679 fasta sequence
[CAATAAGGAAACGAAGAAGAAGGAAAAGATGAAGAAAAAGTGGTCCTTCAGGTCGATCAGCTTCAGCAAGAAGGATAAGAACAAGCCTGCCCGCGAAGAAGCGCCCAAGAATGGAGACGTCACCAAGGAGGAACCTCTCGCGGAGGGCGGCGAGGAGCAGGAGAACGGATCGGGCACGGCGGGTAGCCCCGTGGAGGAGAAATCAGCGGTGAGCAGTCCGACGACGGAGAACGAGGAGGCGACGGCGGCGGCGGTGGCGGCGGCGGCGGCGGCGGCGGCGCCCGCGGCAGCGGCAACAGCGGCAACAACGGCAGCGGCAACACCGTCATCACCGTCCTCGCCACAACCGCCGTCGAGCGCCGCGGAGACGAAGCAGCAGGAGGAGAGCAGCGGAGCGGCGTCGGCGGCGGCCAGCGGAGCCAGCCCGTTGGAGGAAAAGACGGAGGAGGCCGCCGATCCCTCCACCGCCCCGACTCCCGCCCCCTTGGAGGAAAAGAAAGAGGAGGTGGAAAAACTCGAGGCCGAGAAAAAAGCAGTCGAGAGCACCCCGGAACAGCCAGAGGCCCCGGTAGAAAATAACGTGGGCCACGACGTGAGCACGACGGAGAGTTCAACCGAGCCTGTCAAGGTTACATCCCCAGCCGTCCCAAGCGAAGTGATAACCGCCTCTCCGCCATCT]
[+] EMBL BI512486 [CAATAAGGAAACGAAGAAGAAGGAAAAGATGAAGAAAAAGTGGTCCTTCAGGTCGATCAGCTTCAGCAAGAAGGATAAGAACAAGCCTGCCCGCGAAGAAGCGCCCAAGAATGGAGACGTCACCAAGGAGGAACCTCTCGCGGAGGGCGGCGAGGAGCAGGAGAACGGATCGGGCACGGCGGGTAGCCCCGTGGAGGAGAAATCAGCGGTGAGCAGTCCGACGACGGAGAACGAGGAGGCGACGGCGGCGGCGGTGGCGGCGGCGGCGGCGGCGGCGGCGCCCGCGGCAGCGGCAACAGCGGCAACAACGGCAGCGGCAACACCGTCATCACCGTCCTCGCCACAACCGCCGTCGAGCGCCGCGGAGACGAAGCAGCAGGAGGAGAGCAGCGGAGCGGCGTCGGCGGCGGCCAGCGGAGCCAGCCCGTTGG ]
[+] EMBL BI502784 [ GAGAACGAGGAGGCGACGGCGGCGGCGGTGGCGGCGGCGGCGGCGGCGGCGGCGCCCGCGGCAGCGGCAACAGCGGCAACAACGGCAGCGGCAACACCGTCATCACCGTCCTCGCCACAACCGCCGTCGAGCGCCGCGGAGACGAAGCAGCAGGAGGAGAGCAGCGGAGCGGCGTCGGCGGCGGCCAGCGGAGCCAGCCCGTTGGAGGAAAAGACGGAGGAGGCCGCCGATCCCTCCACCGCCCCGACTCCCGCCCCCTTGGAGGAAAAGAAAGAGGAGGTGGAAAAACTCGAGGCCGAGAAAAAAGCAGTCGAGAGCACCCCGGAACAGCCAGAGGCCCCGGTAGAAAATAACGTGGGCCACGACGTGAGCACGACGGAGAGTTCAACCGAGCCTGTCAAGGTTACATCCCCAGCCGTCCCAAGCGAAGTGATAACCGCCTCTCCGCCATCT]
consensusID : consensus_1091#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 534 fasta sequence
[GAATCGGTGTCGATAAGCCTCAATTCGTACAATGAGTCCGACATTGAGTTAAAGGAGAGGTTAGCCGAGTCTCTGGCGGAGACCGAGAAGCAGGAAGAGAGCTTGGTCTCGTGTCAGTTGTTGAACAACGCAACGTCGTCGACCACTGTCCAGGAGACCCATCAGAGCACCCCGGAACAGCCAGAGGCCCCGGTAGAAAATAACGTGGGCCACGACGTGAGCACGACGGAGAGTTCAACCGAGCCTGTCAAGGTTACATCCCCAGCCGTCCCAAGCGAAGTGATAACCGCCTCTCCGCCATCTGCACCGGCCATCACCGAGGATGTTGCCTCGGTAGCCAAGGCTATCGAAGAAATTGACATAAGCGATAAGGCTGTTGCGGCGGCAACCATCGAGTGTAATACGAATGAAATTATCGCGGAAGCACGTTACCAAAACAACATAAACGAATAAATCGAAACGCTAATCGAATTGTATTTTTGGGAAGAAGAAAGTTCTTTTCTCTCGTTAAAACCAAAAAAAGTATATTATATA]
[+] EMBL BI510814 [GAATCGGTGTCGATAAGCCTCAATTCGTACAATGAGTCCGACATTGAGTTAAAGGAGAGGTTAGCCGAGTCTCTGGCGGAGACCGAGAAGCAGGAAGAGAGCTTGGTCTCGTGTCAGTTGTTGAACAACGCAACGTCGTCGACCACTGTCCAGGAGACCCATCAGAGCACCCCGGAACAGCCAGAGGCCCCGGTAGAAAATAACGTGGGCCACGACGTGAGCACGACGGAGAGTTCAACCGAGCCTGTCAAGGTTACATCCCCAGCCGTCCCAAGCGAAGTGATAACCGCCTCTCCGCCATCTGCACCGGCCATCACCGAGGATGTTGCCTCGGTAGCCAAGGCTATCGAAGAAATTGACATAAGCGATAAGGCTGTTGCGGCGGCAACCATCGAGTGTAATACGAATGAAATTATCGCGGAAGCACGTTACCAAAACAACATAAACGAATAAATCGAAACGCTAATCGAATTGTATTTTTGGGAAGAAGAAAGTTCTTTTCTCTCGTTAAAACCAAAAAAAGTATATTATATA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_1091#0 CAATAAGGAAACGAAGAAGAAGGAAAAGATGAAGAAAAAGTGGTCCTTCAGGTCGATCAG 60
consensus_1091#1 ----------------------GAATCGGTGTCGATAAGCC--TCAATTCGTACAATGAG 36
*** * ** ** ** ** * * * ** **
consensus_1091#0 CTTCAGCAAGAAGGATAAGAACAAGCCTGCCCGCGAAGAAGCGCCCAAGAATGGAGACGT 120
consensus_1091#1 -TCCGACATTGAGTTAAAGGAGAGGTTAGCC----GAGTCTCTGGCGGAGACCGAGAAGC 91
* * ** ** *** * * * *** ** * * * **** *
consensus_1091#0 CACCAAGGAGGAACCTCTCGCGGAGGGCGGCGAGGAGCAGGAGAACGGATCGGGCACGG- 179
consensus_1091#1 AGGAAGAGAGCTTGGTCTCGTGTCAGTTGTTGAACAACGCAACGTCG--TCGACCACTGT 149
* *** ***** * * * ** * * * ** *** *** *
consensus_1091#0 -CGGGTAGCCCCGTGGAGGAGAAATCAGCGGTGAGCAGTCCGACGACGGAGAACGAGG-A 237
consensus_1091#1 CCAGGAGACCCATCAGAGCACCCCGGAACAGCCAGAGGCCC--CGGTAGAAAATAACGTG 207
* ** *** *** * * * * ** * ** ** ** ** * *
consensus_1091#0 GGCGACGGCGGCGGCGGTGGCGGCGGCGGCGGCGGCGGCGGCGCCCGCGGCAGCGGCAAC 297
consensus_1091#1 GGCCACGACGTGAGCA----CGACGGAGAGTTCAACCGAGCCTGTCAAGGTTACATCCCC 263
*** *** ** ** ** *** * * * * * * * ** * * *
consensus_1091#0 AGCGGCAACAACGGCAGCGGCAACACCGTCATCACCGTCCTCGCCA-CAACCGCCGTCGA 356
consensus_1091#1 AGCCGTCCCAAGCGAAGTGATAACCGCCTCTCCGCCATCTGCACCGGCCATCACCGAGGA 323
*** * *** * ** * *** * ** * ** ** * ** * * * *** **
consensus_1091#0 G--CGCCGCGGAGACGAAGCAGCAGGAGGAGAGCAGCGGAGCGGCGTCGGCGGCGGCCAG 414
consensus_1091#1 TGTTGCCTCGGTAGCCAAGGCTATCGAAGAAATTGACATA--AGCGATAA-GGCTGTT-G 379
*** *** * *** ** ** * * * *** *** * *
consensus_1091#0 CGGAGCCAGCCCGTTGGAGGAAAAGACGGAGGAGGCCGCCGATCCCTCCACCGCCCCGAC 474
consensus_1091#1 CGGCGGCAACCA--TCGAGTGTAATACGAATGAAATTATCG------CGGAAGCACGTTA 431
*** * ** ** * *** ** *** * ** ** * ** *
consensus_1091#0 TCCCGCCCCCTTGGAGGAAAAGAAAGAGGAGGTGGAAAAACTCGAGGCCGAGAAAAAAGC 534
consensus_1091#1 CCAAAACAACATAAACGAATAAATCGAAACGCTAATCGAATTGTATTTTTGGGAAGAAGA 491
* * * * * *** * * ** * * ** * * * ** ***
consensus_1091#0 AGTCGAGAGCACCCCGGAACAGCCAGAGGCCCCGGTAGAAAATAACGTGGGCCACGACGT 594
consensus_1091#1 AAGTTCTTTTCTCTCGTTAAAACCAAAAAAAGTA-TATTATATA---------------- 534
* * ** * * *** * ** * ***
consensus_1091#0 GAGCACGACGGAGAGTTCAACCGAGCCTGTCAAGGTTACATCCCCAGCCGTCCCAAGCGA 654
consensus_1091#1 ------------------------------------------------------------
consensus_1091#0 AGTGATAACCGCCTCTCCGCCATCT 679
consensus_1091#1 -------------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |