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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1156#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 689 fasta sequence
[TACGTAGAAAAATAAATCATTTATATTACCCAAAAATCACTCTATTAAAGTAACTTAAGTTTTATACTCTAAGAAATGCATTGTATACAATAGTTACGACTATAAATGATCTTATTTACTATTCATCTATATTACATATTATGTACAAATAAAAATCACAGAATTACTGTAGCACATGAATTCAATCATAAAAATCTTAATGTTCGATTAGATTGTTTTCTCCAGAAAAAATATACATTAGAAAAATTTGTACATTACATACAGTCTTGGAACATGACATGATGAAAGAGAAAACAATCATTTCCAAACTTGTATTAATCCATCTGTACTACCAGTCAGAATACAAGTATTTGACATAGATACCGCAGAAATTGTGTCATGATGTCCAGATGGCGGAGTTTCTGGACCTTGACCACCTTCTTCAGAATTTCTCGTTCTAATGCTATTACTTCCTCCAGATGATGGAATAGGACCACCTCCAGCTAAAACTTCTTGTACTACATTAGTTCCATCAATTAAACGTTGTCTGTAAAATTAAAAATTTTTTTAAAAAATTTTTTTAAATAATATTATATATAATGTAAACTTTATATTATTTTTATTATGAATACTAACTCATATGCTAATGAATTTGGAGGAGTAACATCAACAGCGGCAGGCAATGCAACATATGATTCATTGGGCGCATT]
[+] EMBL BI503298 [TACGTAGAAAAATAAATCATTTATATTACCCAAAAATCACTCTATTAAAGTAACTTAAGTTTTATACTCTAAGAAATGCATTGTATACAATAGTTACGACTATAAATGATCTTATTTACTATTCATCTATATTACATATTATGTACAAATAAAAATCACAGAATTACTGTAGCACATGAATTCAATCATAAAAATCTTAATGTTCGATTAGATTGTTTTCTCCAGAAAAAATATACATTAGAAAAATTTGTACATTACATACAGTCTTGGAACATGACATGATGAAAGAGAAAACAATCATTTCCAAACTTGTATTAATCCATCTGTACTACCAGTCAGAATACAAGTATTTGACATAGATACCGCAGAAATTGTGTCATGATGTCCAGATGGCGGAGTTTCTGGACCTTGACCACCTTCTTCAGAATTTCTCGTTCTAATGCTATTACTTCCTCCAGATGATGGAATAGGACCACCTCCAGCTAAAACTTCTTGTACTACATTAGTTCCATCAATTAAACGTTGTCTGTAAAATTAAAAATTTTTTTAA ]
[-] EMBL BI510355 [ CATTTATATTACCCAAAAATCACTCTATTAAAGTAACTTAAGTTTTATACTCTAAGAAATGCATTGTATACAATAGTTACGACTATAAATGATCTTATTTACTATTCATCTATATTACATATTATGTACAAATAAAAATCACAGAATTACTGTAGCACATGAATTCAATCATAAAAATCTTAATGTTCGATTAGATTGTTTTCTCCAGAAAAAATATACATTAGAAAAATTTGTACATTACATACAGTCTTGGAACATGACATGATGAAAGAGAAAACAATCATTTCCAAACTTGTATTAATCCATCTGTACTACCAGTCAGAATACAAGTATTTGACATAGATACCGCAGAAATTGTGTCATGATGTCCAGATGGCGGAGTTTCTGGACCTTGACCACCTTCTTCAGAATTTCTCGTTCTAATGCTATTACTTCCTCCAGATGATGGAATAGGACCACCTCCAGCTAAAACTTCTTGTACTACATTAGTTCCATCAATTAAACGTTGTCTGTAAAATTAAAAATTTTTTTAAAAAATTTTTTTAAATAATATTATATATAATGTAAACTTTATATTATTTTTATTATGAATACTAACTCATATGCTAATGAATTTGGAGGAGTAACATCAACAGCGGCAGGCAATGCAACATATGATTCATTGGGCGCATT]
consensusID : consensus_1156#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 565 fasta sequence
[TTATATTACCCAAAAATCACTCTATTAAAGTAACTTAAGTTTTATACTCTAAGAAATGCATTGTATACAATAGTTACGACTATAAATGATCTTATTTACTATTCATCTATATTACATATTATGTACAAATAAAAATCACAGAATTACTGTAGCACATGAATTCAATCATAAAAATCTTAATGTTCGATTAGATTGTTTTCTCCAGAAAAAATATACATTAGAAAAATTTGTACATTACATACAGTCTTGGAACATGACATGATGAAAGAGAAAACAATCATTTCCAAACTTGTATTAATCCATCTGTACTACCAGTCAGAATACAAGTATTTGACATAGATACCGCAGAAATTGTGTCATGATGTCCAGATGGCGGAGTTTCTGGACCTTGACCACCTTCTTCAGAATTTCTCGTTCTAATGCTATTACTTCCTCCAGATGATGGAATAGGACCACCTCCAGCTAAAACTTCTTGTACTACATTAGTTCCATCAATTAAACGTTGGTCATATGCTAATGAATCAGGAGGAGTAACATCAACAGCGGCAGGCGATGCACACATATG]
[+] EMBL BE844656 [TTATATTACCCAAAAATCACTCTATTAAAGTAACTTAAGTTTTATACTCTAAGAAATGCATTGTATACAATAGTTACGACTATAAATGATCTTATTTACTATTCATCTATATTACATATTATGTACAAATAAAAATCACAGAATTACTGTAGCACATGAATTCAATCATAAAAATCTTAATGTTCGATTAGATTGTTTTCTCCAGAAAAAATATACATTAGAAAAATTTGTACATTACATACAGTCTTGGAACATGACATGATGAAAGAGAAAACAATCATTTCCAAACTTGTATTAATCCATCTGTACTACCAGTCAGAATACAAGTATTTGACATAGATACCGCAGAAATTGTGTCATGATGTCCAGATGGCGGAGTTTCTGGACCTTGACCACCTTCTTCAGAATTTCTCGTTCTAATGCTATTACTTCCTCCAGATGATGGAATAGGACCACCTCCAGCTAAAACTTCTTGTACTACATTAGTTCCATCAATTAAACGTTGGTCATATGCTAATGAATCAGGAGGAGTAACATCAACAGCGGCAGGCGATGCACACATATG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_1156#0 TACGTAGAAAAATAAATCATTTATATTACCCAAAAATCACTCTATTAAAGTAACTTAAGT 60
consensus_1156#1 --------------------TTATATTACCCAAAAATCACTCTATTAAAGTAACTTAAGT 40
****************************************
consensus_1156#0 TTTATACTCTAAGAAATGCATTGTATACAATAGTTACGACTATAAATGATCTTATTTACT 120
consensus_1156#1 TTTATACTCTAAGAAATGCATTGTATACAATAGTTACGACTATAAATGATCTTATTTACT 100
************************************************************
consensus_1156#0 ATTCATCTATATTACATATTATGTACAAATAAAAATCACAGAATTACTGTAGCACATGAA 180
consensus_1156#1 ATTCATCTATATTACATATTATGTACAAATAAAAATCACAGAATTACTGTAGCACATGAA 160
************************************************************
consensus_1156#0 TTCAATCATAAAAATCTTAATGTTCGATTAGATTGTTTTCTCCAGAAAAAATATACATTA 240
consensus_1156#1 TTCAATCATAAAAATCTTAATGTTCGATTAGATTGTTTTCTCCAGAAAAAATATACATTA 220
************************************************************
consensus_1156#0 GAAAAATTTGTACATTACATACAGTCTTGGAACATGACATGATGAAAGAGAAAACAATCA 300
consensus_1156#1 GAAAAATTTGTACATTACATACAGTCTTGGAACATGACATGATGAAAGAGAAAACAATCA 280
************************************************************
consensus_1156#0 TTTCCAAACTTGTATTAATCCATCTGTACTACCAGTCAGAATACAAGTATTTGACATAGA 360
consensus_1156#1 TTTCCAAACTTGTATTAATCCATCTGTACTACCAGTCAGAATACAAGTATTTGACATAGA 340
************************************************************
consensus_1156#0 TACCGCAGAAATTGTGTCATGATGTCCAGATGGCGGAGTTTCTGGACCTTGACCACCTTC 420
consensus_1156#1 TACCGCAGAAATTGTGTCATGATGTCCAGATGGCGGAGTTTCTGGACCTTGACCACCTTC 400
************************************************************
consensus_1156#0 TTCAGAATTTCTCGTTCTAATGCTATTACTTCCTCCAGATGATGGAATAGGACCACCTCC 480
consensus_1156#1 TTCAGAATTTCTCGTTCTAATGCTATTACTTCCTCCAGATGATGGAATAGGACCACCTCC 460
************************************************************
consensus_1156#0 AGCTAAAACTTCTTGTACTACATTAGTTCCATCAATTAAACGTTGTCTGTAAAATTAAAA 540
consensus_1156#1 AGCTAAAACTTCTTGTACTACATTAGTTCCATCAATTAAACGTTGGTCATATGCTAATGA 520
********************************************* ** * * *
consensus_1156#0 ATTTTTTTAAAAAATTTTTTTAAATAATATTATATATAATGTAAACTTTATATTATTTTT 600
consensus_1156#1 ATCA----GGAGGAGTAACATCAACAGCG--GCAGGCGATGCACACAT-ATG-------- 565
** * * * * ** * * *** * ** * **
consensus_1156#0 ATTATGAATACTAACTCATATGCTAATGAATTTGGAGGAGTAACATCAACAGCGGCAGGC 660
consensus_1156#1 ------------------------------------------------------------
consensus_1156#0 AATGCAACATATGATTCATTGGGCGCATT 689
consensus_1156#1 -----------------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |