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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1167#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 667 fasta sequence
[ACGAATAGTGATCGTTGGTGCAGGTGCATCTGGTATCGCAGCTGCGGCGAAATTAATTGAAAATGGCCTGGAAAATCTTATAATTTTAGAAGCCGAAAATCGAATCGGTGGACGTGTGAATACAGTCAAATTTGATGATTATCTGGTCGATTTAGGCGCGCAATGGATTCACGGAGAAAAGGGAAATGTTGTGTATGAATTGGTAGCTCCTTTGAATATTACAGATAACTCTAAGCCACACGATGATGAAGTATACACATCTACAGGCGAGTTGATTGATACCAGAATCACAAAAAATCTTACAGATAGTTACTTCAATTACTTAGACTCGATTGAATACATAACGAATAACGAGTGTTACGATTCCATCGGCGAATGTTTCGAAAATAAGTTGAAAGACGATTTTACGCAATTTCCGGAATTAAATGAAACGCTACAGGATCAATTATTATGGCTTTTCAATATGATGCAAATTGGTTACGATCCTGCTGATAATTGGTACGATATCGCAGCGAAAGGATATTTGGAATATGAAATATGTANNNNNAGATCCAGCGATTAATTGGAAAGAACGAGGATATGGCACTATTCTAGATATATTAATGAAAAAATTTCCAAATCCAGAAGAAGAACTACCCGTATTGAATAAAACGATTCTCAATGCTGA]
[+] EMBL BI504544 [ACGAATAGTGATCGTTGGTGCAGGTGCATCTGGTATCGCAGCTGCGGCGAAATTAATTGAAAATGGCCTGGAAAATCTTATAATTTTAGAAGCCGAAAATCGAATCGGTGGACGTGTGAATACAGTCAAATTTGATGATTATCTGGTCGATTTAGGCGCGCAATGGATTCACGGAGAAAAGGGAAATGTTGTGTATGAATTGGTAGCTCCTTTGAATATTACAGATAACTCTAAGCCACACGATGATGAAGTATACACATCTACAGGCGAGTTGATTGATACCAGAATCACAAAAAATCTTACAGATAGTTACTTCAATTACTTAGACTCGATTGAATACATAACGAATAACGAGTGTTACGATTCCATCGGCGAATGTTTCGAAAATAAGTTGAAAGACGATTTTACGCAATTTCCGGAATTAAATGAAACGCTACAGGATCAATTATTATGGCTTTTCAATATGATGCAAATTGGTTACGATCCTGCTGATAATTGGTACGATATCGCAGCGAAAGGATATTTGGAATATGAAATATGTANNNNNAGATCCAGCGATTAATTGGAAAGAACGAGGATATGGCACTATTCTAGATATATTAATGAAAAAATTTCCAAATCCAGAAGAAGAACTACCCGTATTGAATAAAACGATTCTCAATGCTGA]
[+] EMBL BI512222 [ AAATGGCCTGGAAAATCTTATAATTTTAGAAGCCGAAAATCGAATCGGTGGACGTGTGAATACAGTCAAATTTGATGATTATCTGGTCGATTTAGGCGCGCAATGGATTCACGGAGAAAAGGGAAATGTTGTGTATGAATTGGTAGCTCCTTTGAATATTACAGATAACTCTAAGCCACACGATGATGAAGTATACACATCTACAGGCGAGTTGATTGATACCAGAATCACAAAAAATCTTACAGATAGTTACTTCAATTACTTAGACTCGATTGAATACATAACGAATAACGAGTGTTACGATTCCATCGGCGAATGTTTCGAAAATAAGTTGAAAGACGATTTTACGCAATTTCCGGAATTAAATGAAACGCTACAGGATCAATTATTATGGCTTTTC ]
consensusID : consensus_1167#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 518 fasta sequence
[TTTAGAAGCCGAAAATCGAATCGGTGGACGTGTGAATACAGTCAAATTTGATGATTATCTGGTCGATTTAGGCGCGCAATGGATTCACGGAGAAAAGGGAAATGTTGTGTATGAATTGGTAGCTCCTTTGAATATTACAGATAACTCTAAGCCACACGATGATGAAGTATACACATCTACAGGCGAGTTGATTGATACCAGAATCACAAAAAATCTTACAGATAGTTACTTCAATTACTTAGACTCGATTGAATACATAACGAATAACGAGTGTTACGATTCCATCGGCGAATGTTTCGAAAATAAGTACGAATTTCATGTTGTTGTACCACCGCTTCATGAGTGTACTCAGGATAAAAAAATTCTTAGACAAATGCATCGTTGAAAGACGATTTTACGCAATTTCCGGAATTAAATGAAACGCTACAGGATCAATTATTATGGCTTTTCAATATGATGCAAATTGGTTACGATCCTGCTGATAATTGGTACGATATCGCAGCGAAAGGATATTTGGA]
[+] EMBL BI514740 [TTTAGAAGCCGAAAATCGAATCGGTGGACGTGTGAATACAGTCAAATTTGATGATTATCTGGTCGATTTAGGCGCGCAATGGATTCACGGAGAAAAGGGAAATGTTGTGTATGAATTGGTAGCTCCTTTGAATATTACAGATAACTCTAAGCCACACGATGATGAAGTATACACATCTACAGGCGAGTTGATTGATACCAGAATCACAAAAAATCTTACAGATAGTTACTTCAATTACTTAGACTCGATTGAATACATAACGAATAACGAGTGTTACGATTCCATCGGCGAATGTTTCGAAAATAAGTACGAATTTCATGTTGTTGTACCACCGCTTCATGAGTGTACTCAGGATAAAAAAATTCTTAGACAAATGCATCGTTGAAAGACGATTTTACGCAATTTCCGGAATTAAATGAAACGCTACAGGATCAATTATTATGGCTTTTCAATATGATGCAAATTGGTTACGATCCTGCTGATAATTGGTACGATATCGCAGCGAAAGGATATTTGGA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_1167#0 ACGAATAGTGATCGTTGGTGCAGGTGCATCTGGTATCGCAGCTGCGGCGAAATTAATTGA 60
consensus_1167#1 ------------------------------------------------------------
consensus_1167#0 AAATGGCCTGGAAAATCTTATAATTTTAGAAGCCGAAAATCGAATCGGTGGACGTGTGAA 120
consensus_1167#1 ------------------------TTTAGAAGCCGAAAATCGAATCGGTGGACGTGTGAA 36
************************************
consensus_1167#0 TACAGTCAAATTTGATGATTATCTGGTCGATTTAGGCGCGCAATGGATTCACGGAGAAAA 180
consensus_1167#1 TACAGTCAAATTTGATGATTATCTGGTCGATTTAGGCGCGCAATGGATTCACGGAGAAAA 96
************************************************************
consensus_1167#0 GGGAAATGTTGTGTATGAATTGGTAGCTCCTTTGAATATTACAGATAACTCTAAGCCACA 240
consensus_1167#1 GGGAAATGTTGTGTATGAATTGGTAGCTCCTTTGAATATTACAGATAACTCTAAGCCACA 156
************************************************************
consensus_1167#0 CGATGATGAAGTATACACATCTACAGGCGAGTTGATTGATACCAGAATCACAAAAAATCT 300
consensus_1167#1 CGATGATGAAGTATACACATCTACAGGCGAGTTGATTGATACCAGAATCACAAAAAATCT 216
************************************************************
consensus_1167#0 TACAGATAGTTACTTCAATTACTTAGACTCGATTGAATACATAACGAATAACGAGTGTTA 360
consensus_1167#1 TACAGATAGTTACTTCAATTACTTAGACTCGATTGAATACATAACGAATAACGAGTGTTA 276
************************************************************
consensus_1167#0 CGATTCCATCGGCGAATGTTTCGAAAATAAGT---------------------------- 392
consensus_1167#1 CGATTCCATCGGCGAATGTTTCGAAAATAAGTACGAATTTCATGTTGTTGTACCACCGCT 336
********************************
consensus_1167#0 ----------------------------------------------TGAAAGACGATTTT 406
consensus_1167#1 TCATGAGTGTACTCAGGATAAAAAAATTCTTAGACAAATGCATCGTTGAAAGACGATTTT 396
**************
consensus_1167#0 ACGCAATTTCCGGAATTAAATGAAACGCTACAGGATCAATTATTATGGCTTTTCAATATG 466
consensus_1167#1 ACGCAATTTCCGGAATTAAATGAAACGCTACAGGATCAATTATTATGGCTTTTCAATATG 456
************************************************************
consensus_1167#0 ATGCAAATTGGTTACGATCCTGCTGATAATTGGTACGATATCGCAGCGAAAGGATATTTG 526
consensus_1167#1 ATGCAAATTGGTTACGATCCTGCTGATAATTGGTACGATATCGCAGCGAAAGGATATTTG 516
************************************************************
consensus_1167#0 GAATATGAAATATGTANNNNNAGATCCAGCGATTAATTGGAAAGAACGAGGATATGGCAC 586
consensus_1167#1 GA---------------------------------------------------------- 518
**
consensus_1167#0 TATTCTAGATATATTAATGAAAAAATTTCCAAATCCAGAAGAAGAACTACCCGTATTGAA 646
consensus_1167#1 ------------------------------------------------------------
consensus_1167#0 TAAAACGATTCTCAATGCTGA 667
consensus_1167#1 ---------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |