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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_117#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1048 fasta sequence
[GTTACTGATTTAGGAGTTAAGGCTCTAATATTGAACACGGCCACAGTGCCGGCAGTGGACAAGAAAGGTGTAACAAGAGGCTACATGGCAAATGATCTCATCTGCGTCGTAGTCAGTGAAGTTAACGTTGAAGCCGAGCGAGTTGTTGCAGTTATGAACGTACCTGCCCGTGAAGGGCAAGCACCACACCCACCTATGGGACTTATCCATTCTGATGATCTTCCAGAAGCTTATAAGAAAGCGATGGACAACAAAGGACAATCTTATGAAGCGATGTTGGAGAATAGTACTGGCTTCAACAACCCGAACAACATTAAATATCTTTGCGACGTGATGGGTCTTGGACAAGAGAACCATTCCAATATGGTTGGTTTAAGAGAAAAGTTTCCACCCAATGAATATGCATCCGAATTAAGACAGGCACAGGCTAGTAAATGGGCATTCCGAAGCGTGGCTGAAGGTATAGATCATTTCAAAGCTGGACGTCACACGGAAGCCTTCCAGTGTCTCAATAAGGCACTTACCGTAGATCCGCGAAACGTTGAAGGATTAGTGGCTCGTGGAGCATTATATGCAAATAGTGGTAGTTTCAAGAAAGCAATTGATGATTTTGAGACAGCATTGAAACTAAATCAGACTCATACGAATGCCCGTAAATATATGGCTGAGACTCTTGTTGCTCTAGGTCGAAGTTATGAAGATGAAAAGAAGTACGAAGACGCTCAAAAGGCATATGAAAATTGCTTGGCGATTGCTCCATTTCACGAAGAAGCTAGGAATTCTATCGAATACATCAAGTCTAAAACATTAACATCTTCTTTGAATCCTTTGGATACGTTCAAGAGTTTTGAAACTGAGAATGATGTGAGTGAAAATAAAAAAGAAAAGAAGAAACGTAAGAAGGAAAGGAAATTGCGTTCAAAGAAAAGNCNGAGATGGAGTTCCAGCTCTAGTTCGTCATCAAGTGGATCTTCGAGTTCCTCCAGTTCTGAATCCAGCAGTTCTTCTTCGTCCGCAAGTTCACGATCAGCATCCCGATCGCCTAGTC]
[+] EMBL BI506353 [GTTACTGATTTAGGAGTTAAGGCTCTAATATTGAACACGGCCACAGTGCCGGCAGTGGACAAGAAAGGTGTAACAAGAGGCTACATGGCAAATGATCTCATCTGCGTCGTAGTCAGTGAAGTTAACGTTGAAGCCGAGCGAGTTGTTGCAGTTATGAACGTACCTGCCCGTGAAGGGCAAGCACCACACCCACCTATGGGACTTATCCATTCTGATGATCTTCCAGAAGCTTATAAGAAAGCGATGGACAACAAAGGACAATCTTATGAAGCGATGTTGGAGAATAGTACTGGCTTCAACAACCCGAACAACATTAAATATCTTTGCGACGTGATGGGTCTTGGACAAGAGAACCATTCCAATATGGTTGGTTTAAGAGAAAAGTTTCCACCCAATGAATATGCATCCGAATTAAGACAGGCACAGGCTAGTAAATGGGCATTCCGAAGCGTGGCTGAAGGTATAGATCATTTCAAAGCTGGACGTCACACGGAAGCCTTCCAGTGTCTCAATAAGNCACTTACCGTAGATCCGCGAAACGTTGAAGGATTAGTGGCTCGTGGAGCATTATATGCAA ]
[+] EMBL BI504077 [GTTACTGATTTAGGAGTTAAGGCTCTAATATTGAACACGGCCACAGTGCCGGCAGTGGACAAGAAAGGTGTAACAAGAGGCTACATGGCAAATGATCTCATCTGCGTCGTAGTCAGTGAAGTTAACGTTGAAGCCGAGCGAGTTGTTGCAGTTATGAACGTACCTGCCCGTGAAGGGCAAGCACCACACCCACCTATGGGACTTATCCATTCTGATGATCTTCCAGAAGCTTATAAGAAAGCGATGGACAACAAAGGACAATCTTATGAAGCGATGTTGGAGAATAGTACTGGCTTCAACAACCCGAACAACATTAAATATCTTTGCGACGTGATGGGTCTTGGACAAGAGAACCATTCCAATATGGTTGGTTTAAGAGAAAAGTTTCCACCCAATGAATATGCATCCGAATTAAGACAGGCACAGGCTAGTAAATGGGCATTCCGAAGCGTGGCTGAAGGTATAGATCATTTCAAAGCTGGACGTCACACGGAAGCCTTCCAGTGTCTCAATAAGGCACTTACCGTAGATCNGCGAAACGTTGAAGGATTAGTGGCTCGTGGAGCATTATATGCAA ]
[+] EMBL BI505671 [ GGCAGTGGACAAGAAAGGTGTAACAAGAGGCTACATGGCAAATGATCTCATCTGCGTCGTAGTCAGTGAAGTTAACGTTGAAGCCGAGCGAGTTGTTGCAGTTATGAACGTACCTGCCCGTGAAGGGCAAGCACCACACCCACCTATGGGACTTATCCATTCTGATGATCTTCCAGAAGCTTATAAGAAAGCGATGGACAACAAAGGACAATCTTATGAAGCGATGTTGGAGAATAGTACTGGCTTCAACAACCCGAACAACATTAAATATCTTTGCGACGTGATGGGTCTTGGACAAGAGAACCATTCCAATATGGTTGGTTTAAGAGAAAAGTTTCCACCCAATGAATATGCATCCGAATTAAGACAGGCACAGGCTAGTAAATGGGCATTCCGAAGCGTGGCTGAAGGTATAGATCATTTCAAAGCTGGACGTCACACGGAAGCCTTCCAGTGTCTCAATAAGGCACTTACCGTAGATCCGCGAAACGTTGAAGGATTAGTGGCTCGTGGAGCATTATATGCAA ]
[+] EMBL BI506995 [ AATGGGCATTCCGAAGCGTGGCTGAAGGTATAGATCATTTCAAAGCTGGACGTCACACGGAAGCCTTCCAGTGTCTCAATAAGGCACTTACCGTAGATCCGCGAAACGTTGAAGGATTAGTGGCTCGTGGAGCATTATATGCAAATAGTGGTAGTTTCAAGAAAGCAATTGATGATTTTGAGACAGCATTGAAACTAAATCAGACTCATACGAATGCCCGTAAATATATGGCTGAGACTCTTGTTGCTCTAGGTCGAAGTTATGAAGATGAAAAGAAGTACGAAGACGCTCAAAAGGCATATGAAAATTGCTTGGCGATTGCTCCATTTCACGAAGAAGCTAGGAATTCTATCGAATACATCAAGTCTAAAACATTAACATCTTCTTTGAATCCTTTGGATACGTTCAAGAGTTTTGAAACTGAGAATGATGTGAGTGAAAATAAAAAAGAAAAGAAGAAACGTAAGAAGGAAAGGAAATTGCGTTCAAAGAAAAGNCNGAGATGGAGTTCCAGCTCTAGTTCGTCATCAAGTGGATCTTCGAGTTCCTCCAGTTCTGAATCCAGCAGTTCTTCTTCGTCCGCAAGTTCACGATCAGCATCCCGATCGCCTAGTC]
consensusID : consensus_117#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 894 fasta sequence
[ATGGAATCAATGGATGCGCGCCTTGTGGCGCAAGCATTGAACTACCATGGTCAACAGTTGCAGAAAGTGTGGGAAGGAGAACGCAACGAGAATGAGCTGGCCATGCTCAATCTCAAGGAACCAAATTTTGAGATCTATCAACAACGTCAAAAGACTTTGAGTTTTGGTGATAGAGGAAAAAGGCTAAAGCTACAGCAGTTCTTAGCAAAGAAAGCAGATGCCCTTTATGATAAATCAAATTTGGAGAAAACAGTTGAACCTATTAAGCAAGAATTAGGAGATGAAGAATTTTATGCAACAATGCCANGCCTTGATACTTTTGTCACCATGGAAAAATCTCAACGTATTCGCAATTTTTTGGAGAGTTTGGTCATTGGAGATGTTATTTACGCGCAAGTGATGGGTAAAAGTGCTGCTGGACTTCTTCTGAAGGTGCTTTGCAACTGCAGCGATTGCCCCAGAGTTGTTACTGATTTAGGAGTTAAGGCTCTAATATTGAACACGGCCACAGTGCCGGCAGTGGACAAGAAAGGTGTAACAAGAGGCTACATGGCAAATGATCTCATCTGCGTCGTAGTCAGTGAAGTTAACGTTGAAGCCGAGCGAGTTGTTGCAGTTATGAACGTACCTGCCCGTGAAGGGCAAGCACCACACCCACCTATGGGACTTATCCATTCTGATGATCTTCCAGAAGCTTATAAGTGCCAGACACTCTCAATAACGTAAAAAGTTGATAGTCAGTATGATGATGAATTTATAATGTGATACAAATGATTCAAACCTTGAGCATTGGTTGACATGGCTCTGTTGCGCACAATATTCTATCTACGTTTGTGATATGTTACTCTCAAAGCACCAGCCAAGCAATGGCGCCAAATGACATCAATGTCTTTT]
[+] EMBL BI507436 [ATGGAATCAATGGATGCGCGCCTTGTGGCGCAAGCATTGAACTACCATGGTCAACAGTTGCAGAAAGTGTGGGAAGGAGAACGCAACGAGAATGAGCTGGCCATGCTCAATCTCAAGGAACCAAATTTTGAGATCTATCAACAACGTCAAAAGACTTTGAGTTTTGGTGATAGAGGAAAAAGGCTAAAGCTACAGCAGTTCTTAGCAAAGAAAGCAGATGCCCTTTATGATAAATCAAATTTGGAGAAAACAGTTGAACCTATTAAGCAAGAATTAGGAGATGAAGAATTTTATGCAACAATGCCAGGCCTTGATACTTTTGTCACCATGGAAAAATCTCAACGTATTCGCAATTTTTTGGAGAGTTTGGTCATTGGAGATGTTATTTACGCGCAAGTGATGGGTAAAAGTGCTGCTGGACTTCTTCTGAAGGTGCTTTGCAACTGCAGCGATTGCCCCAGAGTTGTTACTGATTTAGGAGTTAAGGC ]
[-] EMBL BI506752 [ AGATGAAGAATTTTATGCAACAATGCCANGCCTTGATACTTTTGTCACCATGGAAAAATCTCAACGTATTCGCAATTTTTTGGAGAGTTTGGTCATTGGAGATGTTATTTACGCGCAAGTGATGGGTAAAAGTGCTGCTGGACTTCTTCTGAAGGTGCTTTGCAACTGCAGCGATTGCCCCAGAGTTGTTACTGATTTAGGAGTTAAGGCTCTAATATTGAACACGGCCACAGTGCCGGCAGTGGACAAGAAAGGTGTAACAAGAGGCTACATGGCAAATGATCTCATCTGCGTCGTAGTCAGTGAAGTTAACGTTGAAGCCGAGCGAGTTGTTGCAGTTATGAACGTACCTGCCCGTGAAGGGCAAGCACCACACCCACCTATGGGACTTATCCATTCTGATGATCTTCCAGAAGCTTATAAGTGCCAGACACTCTCAATAACGTAAAAAGTTGATAGTCAGTATGATGATGAATTTATAATGTGATACAAATGATTCAAACCTTGAGCATTGGTTGACATGGCTCTGTTGCGCACAATATTCTATCTACGTTTGTGATATGTTACTCTCAAAGCACCAGCCAAGCAATGGCGCCAAATGACATCAATGTCTTTT]
[-] EMBL BI510090 [ CATGGAAAAATCTCAACGTATTCGCAATTTTTTGGAGAGTTTGGTCATTGGAGATGTTATTTACGCGCAAGTGATGGGTAAAAGTGCTGCTGGACTTCTTCTGAAGGTGCTTTGCAACTGCAGCGATTGCCCCAGAGTTGTTACTGATTTAGGAGTTAAGGCTCTAATATTGAACACGGCCACAGTGCCGGCAGTGGACAAGAAAGGTGTAACAAGAGGCTACATGGCAAATGATCTCATCTGCGTCGTAGTCAGTGAAGTTAACGTTGAAGCCGAGCGAGTTGTTGCAGTTATGAACGTACCTGCCCGTGAAGGGCAAGCACCACACCCACCTATGGGACTTATCCATTCTGATGATCTTCCAGAAGCTTATAAGTGCCAGACACTCTCAATAACGTAAAAAGTTGATAGTCAGTATGATGATGAATTTATAATGTGATACAAATGATTCAAACCTTGAGCATTGGTTGACATGGCTCTGTTGCGCACAATATTCTATCTACGTTTGTGATATGTTACTCTCAAAGCACCAGCCAAGCAATGGCGCCAAATGACATCAATGTCTTTT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_117#0 -----GTTACTG-ATTTAGGAGTTAAGGCTCTAATATTGAACACGGCCACAGTGCCGGCA 54
consensus_117#1 ATGGAATCAATGGATGCGCGCCTTGTGGCGCAAGCATTGAACT--ACCATGGT--CAACA 56
* * ** ** * ** *** * * ******* *** ** * **
consensus_117#0 GTGGACAAGAAAGGTGTAACAAGAGGCTACATGGCAAATGATCTCATCTGCGTCGTAGTC 114
consensus_117#1 GTTG-CAGAAAGTGTGGGA-AGGAGAACGCAACGAGAATGAGCTGGCCATGCTCAATCTC 114
** * ** ** *** * * *** ** * ***** ** * ** **
consensus_117#0 AGTGAAGTTAACGTTGAAGCCGAGCGA-GTTGTTGCAGTTATGAACGTACCTGCCCGTGA 173
consensus_117#1 AAGGAACCAAATTTTGAGATCTATCAACAACGTCAAAAGACTTTGAGT-TTTGGTGATAG 173
* *** ** **** * * * * ** * * ** ** *
consensus_117#0 AGGGCAAGCACCACACCCACCTATGGGACTTATCCATTCTGATGATCTTCCAGAAGCTTA 233
consensus_117#1 AGGAAAAAGGCTAAAGCTACA-GCAGTTCTTAGCAAAGAAAGCAGATGCCC-----TTTA 227
*** ** * * * * ** * **** * * ** ***
consensus_117#0 TAAGAAAGCGA--TGGACAACAAAGGACAATCTTATGAAGCGATGTTGGAGAATAGTACT 291
consensus_117#1 TGATAAATCAAATTTGGAGAAAACAGTTGAACCTATTAAGCAAGAATTAGGAGATGAAGA 287
* * *** * * * * * ** * * * *** **** * * ** * *
consensus_117#0 GGCTTCAACAACCCGAACAACATTAAATATCTTTGCGAC-GTGATGGGTCTTGGACAAGA 350
consensus_117#1 ATTTTATGCAACAATGCCANGCCTTGATACTTTTGTCACCATGGAAAAATCTCAACGTAT 347
** **** ** * *** **** ** ** * **
consensus_117#0 GAACCATTCCA-ATATGGTTGGTTTAAGAGAAAAGTT-TCCACCCAATGAATATGCATCC 408
consensus_117#1 TCGCAATTTTTTGGAGAGTTTGGTCATTGGAGATGTTATTTACGCGCAAGTGATGGGTAA 407
* *** * *** * * * ** * *** * ** * *** *
consensus_117#0 GAATTAAGACAGGCACAGGCTAGTAAATGGGCATTCCGAAGCGTGGCTGAAGGTATAGAT 468
consensus_117#1 AAGTGCTGCTGGACTT---CTTCTGAAGGTGCTTT-------GCAACTGCAGC----GAT 453
* * * * * ** * ** * ** ** * *** ** ***
consensus_117#0 CATTTCAAAGCTGGACGTCACACGGAAGCCTTCCAGTGTCTCAATAAGGCACTTA-CCGT 527
consensus_117#1 TGCCCCAGAGTTGTTACTGATTTAGGAGTT----AAGGCTCTAATATTGAACACGGCCAC 509
** ** ** * * * ** * * **** * ** **
consensus_117#0 AGATCCGCGAAACGTTGAAGGATTAGTGGCTCGTGGAGCATTATATGCAAATAGTGGTAG 587
consensus_117#1 AGTGCCGGCAGTGGACAAGAAA--GGTGTAACAAGAGGCTACATG-GCAAATGATCTCAT 566
** *** * * * * *** * * ** ** ****** * *
consensus_117#0 TTTCAAGAAAGCAATTGATGATTTTGAGACAGCATTGAAACTAAATCAGACTCATACGAA 647
consensus_117#1 CTGCGTCGTAGTCAGTGAAGTTAACGTTGAAGCCGAGCGAGTTG-TTGCAGTTATGAACG 625
* * ** * *** * * * *** * * * * * * **
consensus_117#0 TGCCCGTAAATATATGGCTGAGACTCTTGTTGCTC-TAGGTCGAAGTTATGAAGATGAAA 706
consensus_117#1 TACCTGCCCGTGAAGGGCAAGCACCACACCCACCTATGGGACTTATCCATTCTGATGATC 685
* ** * * * *** ** * * ** * * ** *****
consensus_117#0 ----AGAAGTACGAAGACGCTCAAAAGGCATATGAAAATTGCTTGGCGATTGCTCCATTT 762
consensus_117#1 TTCCAGAAGCTTATAAGTGCCAGACACTCTCAATAACGTAAAAAGTTGATAG-TCAGTAT 744
***** * ** * * * * ** * * *** * ** * *
consensus_117#0 CACGAAGAAGCTAGGAATTCTATCGAATACATCAAGTCTAAAACATTAACATCTTCTTTG 822
consensus_117#1 GATGATGAATTTATAATGTGATACAAATGATTCAAACCTTGAGCATTGG---TTGACATG 801
* ** *** ** * * * *** **** ** * **** * **
consensus_117#0 AATCCTTTGGATACGTTCAAGAGTTTTGAAACTGAGAATGATGTGAGTGAAAATAAAAAA 882
consensus_117#1 GCTCTGTTGCGCACAAT--ATTCTATCTACGTTTGTGAT-ATGTTACTCTCAAAGCACCA 858
** *** ** * * * * * * ** **** * * ** * *
consensus_117#0 GAAAAGAAGAAACGTAAGAAGGAAAGGAAATTGCGTTCAAAGAAAAGNCNGAGATGGAGT 942
consensus_117#1 GCCAAGCAATGGCGCCAAATGACATCAATGTCTTTT------------------------ 894
* *** * ** * * * * * * *
consensus_117#0 TCCAGCTCTAGTTCGTCATCAAGTGGATCTTCGAGTTCCTCCAGTTCTGAATCCAGCAGT 1002
consensus_117#1 ------------------------------------------------------------
consensus_117#0 TCTTCTTCGTCCGCAAGTTCACGATCAGCATCCCGATCGCCTAGTC 1048
consensus_117#1 ----------------------------------------------
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |