These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1242#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 437 fasta sequence [TCTCAGATTATCATTGCAACAGGGAACCNNTTCGTCTGTATTTCGTAGGAATATGGTCGAACGTAATATGACCAAATCGGCGTATATCCTTGCGACTGTTGGCCTGTCTATGAGTATATTTTCTGTGAGAAAAATGTTAACCTCTAAACACGGACGTCATTTGTAACAAGTTTATTAAAATCAGCAGCAACAAATACAGTTCTAAAAAGAAAAGAAACGAAAAGAAAATAGATAAAAAAGAAAGAAGAAAAAAATAGGATTCATCATATCTGAATCAATTATTATTTTCTTCTTTCTTTTTTCCCTCTCTCTCTCTCCCTTTCATTTCACCGNTTGTCATCGTTTGAAAAATGAAACGCGATTGGAAATCTTACGATCCGTCTTACTCCGCTTCTAATACTCGTCATCATCATCATCATCACCATCATTATCATCAT] [+] EMBL BI516971 [TCTCAGATTATCATTGCAACAGGGAACCNNTTCGTCTGTATTTCGTAGGAATATGGTCGAACGTAATATGACCAAATCGGCGTATATCCTTGCGACTGTTGGCCTGTCTATGAGTATATTTTCTGTGAGAAAAATGTTAACCTCTAAACACGGACGTCATTTGTAACAAGTTTATTAAAATCAGCAGCAACAAATACAGTTCTAAAAAGAAAAGAAACGAAAAGAAAATAGATAAAAAAGAAAGAAGAAAAAAATAGGATTCATCATATCTGAATCAATTATTATTTTCTTCTTTCTTTTTTCCCTCTCTCTCTCTCCCTTTCATTTCACCGNTTGTCATCGTTTGAAAAATGAAACGCGATTGGAAATCTTACGATCCGTCTTACTCCGCTTCTAATACTCGTCATCATCATCATCATCACCATCATTATCATCAT] consensusID : consensus_1242#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 330 fasta sequence [GCCACTCTTTATGCTCTCAGATTATCATTGCAACAGGGAACCGTTTCGTCTGTATTTCGTAGGAATATGGTCGAACGTAATATGACCAAATCGGCGTATATCCTTGCGACTGTTGGCCTGTCTATGAGTATATTTTCTGTGAGAAAAATGTTAACCTCTAAACACGGACGTCATTTGTAACAAGTTTATTAAAATCAGCAGCAACAAATACAGTTCTAAAAAGAAAAGAAACGAAAAGAAAATAGATAAAAAAGAAAGAAGAAAAAAATAGGATTCATCATATCTGAATCAATTATTATTGGCAAAGGAAATTTTTCATCGAATTTTAGC] [+] EMBL BI507888 [GCCACTCTTTATGCTCTCAGATTATCATTGCAACAGGGAACCGTTTCGTCTGTATTTCGTAGGAATATGGTCGAACGTAATATGACCAAATCGGCGTATATCCTTGCGACTGTTGGCCTGTCTATGAGTATATTTTCTGTGAGAAAAATGTTAACCTCTAAACACGGACGTCATTTGTAACAAGTTTATTAAAATCAGCAGCAACAAATACAGTTCTAAAAAGAAAAGAAACGAAAAGAAAATAGATAAAAAAGAAAGAAGAAAAAAATAGGATTCATCATATCTGAATCAATTATTATTGGCAAAGGAAATTTTTCATCGAATTTTAGC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1242#0 --------------TCTCAGATTATCATTGCAACAGGGAACCNNTTCGTCTGTATTTCGT 46 consensus_1242#1 GCCACTCTTTATGCTCTCAGATTATCATTGCAACAGGGAACCGTTTCGTCTGTATTTCGT 60 **************************** **************** consensus_1242#0 AGGAATATGGTCGAACGTAATATGACCAAATCGGCGTATATCCTTGCGACTGTTGGCCTG 106 consensus_1242#1 AGGAATATGGTCGAACGTAATATGACCAAATCGGCGTATATCCTTGCGACTGTTGGCCTG 120 ************************************************************ consensus_1242#0 TCTATGAGTATATTTTCTGTGAGAAAAATGTTAACCTCTAAACACGGACGTCATTTGTAA 166 consensus_1242#1 TCTATGAGTATATTTTCTGTGAGAAAAATGTTAACCTCTAAACACGGACGTCATTTGTAA 180 ************************************************************ consensus_1242#0 CAAGTTTATTAAAATCAGCAGCAACAAATACAGTTCTAAAAAGAAAAGAAACGAAAAGAA 226 consensus_1242#1 CAAGTTTATTAAAATCAGCAGCAACAAATACAGTTCTAAAAAGAAAAGAAACGAAAAGAA 240 ************************************************************ consensus_1242#0 AATAGATAAAAAAGAAAGAAGAAAAAAATAGGATTCATCATATCTGAATCAATTATTATT 286 consensus_1242#1 AATAGATAAAAAAGAAAGAAGAAAAAAATAGGATTCATCATATCTGAATCAATTATTATT 300 ************************************************************ consensus_1242#0 TTCTTCTTTCTTTTTTCCCTCTCTCTCTCTCCCTTTCATTTCACCGNTTGTCATCGTTTG 346 consensus_1242#1 GGCAAAGGAAATTTTTCATCGAATTTTAGC------------------------------ 330 * ****** * * consensus_1242#0 AAAAATGAAACGCGATTGGAAATCTTACGATCCGTCTTACTCCGCTTCTAATACTCGTCA 406 consensus_1242#1 ------------------------------------------------------------ consensus_1242#0 TCATCATCATCATCACCATCATTATCATCAT 437 consensus_1242#1 ------------------------------- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |