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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1299#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 584 fasta sequence
[CTTGGCGAAAAGGCGCGCTGAAGTGAAGTACATCGATGTCTTCAAACAGAACAAGGTAGTCTACTGTTTTGCCCCATTAGCCGAACTATTAGGATATTCAACGACGGTGAGGATAATCTCGTCAGGACATGCAACGTTCACGTTGGAATTCGATCGCTACGAATTAATGGATTCAGCGAATGAAGCAGAAGCGATTAAAAGAGTAACTGGTTTTTATTAAATCCTTTCAAAATCATATGATGATTATTCAAATCAAATTATTCGTTGTGATATTTTAAGAATTTAATTGTACAAAGATAGATTTATGAAAATTATTTACAAAATTATTAATAATGATGCATTTAATGATTAAAATTGATCGAATCAATTTTTCTTTTTCTTCTCAATCTCTACGTAGAGAGATCGTCTCATCATGCGAAATAATGTGTAATGTAACGTGAATACGCAAAATTAAAAAAAAAAAACACATTATTATTCTTGGACAAAATTACATACTCGATTCTTCTTCTTTATTCATTCGATCTAATCAAAATATATTTGCAGCATTTATTTCAATGGTGCTTTACAATTCTTCTTTTCTTATT]
[+] EMBL BI510318 [CTTGGCGAAAAGGCGCGCTGAAGTGAAGTACATCGATGTCTTCAAACAGAACAAGGTAGTCTACTGTTTTGCCCCATTAGCCGAACTATTAGGATATTCAACGACGGTGAGGATAATCTCGTCAGGACATGCAACGTTCACGTTGGAATTCGATCGCTACGAATTAATGGATTCAGCGAATGAAGCAGAAGCGATTAAAAGAGTAACTGGTTTTTATTAAATCCTTTCAAAATCATATGATGATTATTCAAATCAAATTATTCGTTGTGATATTTTAAGAATTTAATTGTACAAAGATAGATTTATGAAAATTATTTACAAAATTATTAATAATGATGCATTTAATGATTAAAATTGATCGAATCAATTTTTCTTTTTCTTCTCAATCTCTACGTAGAGAGATCGTCTCATCATGCGAAATAATGTGTAATGTAACGTGAATACGCAAAATTAAAAAAAAAAAACACATTATTATTCTTGGACAAAATTACATACTCGATTCTTCTTCTTTATTCATTCGATCTAATCAAAATATATTTGCAGCATTTATTTCAATGGTGCTTTACAATTCTTCTTTTCTTATT]
consensusID : consensus_1299#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 492 fasta sequence
[AGTGAATATAAAATAGGAAATATTAATACAAATGTTAAAATAACCATGTCATTAATACCAAATTATGAAAGTAAAGAAACTTTCTTATTGGACAAATCGATGGATTTTATTAATGTTATACCAAAAAATATAATGAAAGTTGTGAAAAATAGTGTTCGATCAGTTCTTTTAAACGGACCAAAATTATGTTATCCCGTTTTAAATATGGGTATTAAATTGCACAGTTTAGAATATGGACCAAATACTACCCCGTCGATAATTAATGCTGCTGTTTCGCAATGTATTAGACAGTTGATGAAGAGTGCTGGCATTGCCCTTTTAGAACCGATAATGCGATTGGAGATCGTGGTCCCTGAAGATTATTTAAGCGTTATTCTCAAAGACTTGGCGAAAAGGCGCGCTGAAGTGAAGTACATCGATGTCTTCAAACAGAACAAGGTAGTCTACTGTTTTGCCCCATTAGCCGAACTATTAGGATATTCAACGACGGTG]
[+] EMBL BI507443 [AGTGAATATAAAATAGGAAATATTAATACAAATGTTAAAATAACCATGTCATTAATACCAAATTATGAAAGTAAAGAAACTTTCTTATTGGACAAATCGATGGATTTTATTAATGTTATACCAAAAAATATAATGAAAGTTGTGAAAAATAGTGTTCGATCAGTTCTTTTAAACGGACCAAAATTATGTTATCCCGTTTTAAATATGGGTATTAAATTGCACAGTTTAGAATATGGACCAAATACTACCCCGTCGATAATTAATGCTGCTGTTTCGCAATGTATTAGACAGTTGATGAAGAGTGCTGGCATTGCCCTTTTAGAACCGATAATGCGATTGGAGATCGTGGTCCCTGAAGATTATTTAAGCGTTATTCTCAAAGACTTGGCGAAAAGGCGCGCTGAAGTGAAGTACATCGATGTCTTCAAACAGAACAAGGTAGTCTACTGTTTTGCCCCATTAGCCGAACTATTAGGATATTCAACGACGGTG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_1299#0 CTTGGCGAAAAGGCGCGCTGAAGTGAAGTACATCGATGTCTTCAAACAGAACAAGGTAGT 60
consensus_1299#1 -----------------------------------------------------AGTGAAT 7
** * *
consensus_1299#0 CTACTGTTTTGCCCCATTAGCCGAACTATTAGGATATTCAACGACGGTGAGGATAATCTC 120
consensus_1299#1 ATAAAATAG-GAAATATTAATACAAATGTTAAAATAACCA-TGTCATTAATACCAAATTA 65
** * * **** ** * *** *** ** * * * * ** *
consensus_1299#0 GTCAGGACATGCAACGTTCACGTTGGA--ATTCGATCGCTACGAATTAATGGATT--CAG 176
consensus_1299#1 TGAAAGTAAAGAAACTTTCTTATTGGACAAATCGATGGAT-TTTATTAATGTTATACCAA 124
* * * * *** *** ***** * ***** * * ******* * **
consensus_1299#0 CGAATGAAGCAGAAGCGATTAAAAG-AGTAACTGGTT--TTTATTAAATCCTTTCAAAAT 233
consensus_1299#1 AAAATATAATGAAAGTTGTGAAAAATAGTGTTCGATCAGTTCTTTTAAACGGACCAAAAT 184
*** * *** * **** *** * * ** ** ** * ******
consensus_1299#0 CATATGATGATTATTCAAATCAAATTATTCGTTGTGATATTTTAAGAATTTAATTGTACA 293
consensus_1299#1 TATGTTATCCCGTTTTAAATATGGGTATTAAATTGCACAGTTTA-GAAT---ATGGACCA 240
** * ** ** **** **** * * * **** **** ** * **
consensus_1299#0 AAGATAGATTTATGAAAATTATTTACAAAATTATTAATAATGATGCATTTAATGATTAAA 353
consensus_1299#1 AATACTACCCCGTCG--ATAATTAATGCTGCTGTT--TCGCAATGTATTAGACAGTTGAT 296
** * * ** *** * * ** * *** *** * ** *
consensus_1299#0 ATTGATCGAATCAATTTTTCTTTTTCTTCTCAATCTCTACGTAGAGAGATCGTCTCATCA 413
consensus_1299#1 GAAGAGTGCTGGCATTGCCCTTTTAGAACCGATAATGCGATTGGAGATCGTGGTCCCTGA 356
** * *** ***** * * * * **** * * * *
consensus_1299#0 TGCGAAATAATGTGTAATGTAACGTGAATACGCAAAATTAAA----AAAAAAAAACACAT 469
consensus_1299#1 AGATTATTTAAGCGTTATTCTCAAAGACTTGGCGAAAAGGCGCGCTGAAGTGAAGTACAT 416
* * * * * ** ** ** * ** *** ** ** ****
consensus_1299#0 TATTATTCTTGGACAAAATTACATACTCGATTCTTCTTCTTTATTCATTCGATCTAATCA 529
consensus_1299#1 CGATGTCTTCAAACAGAACAAGGTAGTCTACTGTTTTGCCCCATT-AGCCGAACTA-TTA 474
* * * *** ** * ** ** * * ** * * *** * *** *** * *
consensus_1299#0 AAATATATTTGCAGCATTTATTTCAATGGTGCTTTACAATTCTTCTTTTCTTATT 584
consensus_1299#1 GGATAT-TCAACGACGGTG------------------------------------ 492
**** * * * *
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |