These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1304#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 652 fasta sequence [CTCTCTCTCTCTCTCTCTCTCTCTTCGAGCTATTAAATTTTGCTATAAGCGATATACGGTGGAATGGAACAAAGTGATGGAAAAAGAGACGAAATGAGTTGAAAACTAGAGAGAAGGAGAGGCAAAGGAAAAAAAAGACAAAGTTTTCGATCGATATCTAAACGGTGGTAAGGACGGTAGCGCGTTAATGTCCGTGTTTGTGTATCTTTTATTTTGGAAGCGCCAATGCAATGGCCCCACCCATCCCGTTGGGCAGGCTGGCGAGCGTTCAACACAAGTAAGTCAACAATGGCAATAGCGGACTTTTCGTCGTCTTCTTCGTTCTCGTCGTTTTCGTCCTCCTCTTCCTCAGTGATCTCGTCGTCGTCATCGTCAACATGGACAATGTCACCGGTCGAGCCTTGGGATATATCGACGTTCCCATAAGATAAACACGACGAATAGTTCTCTCCCAAGTCGAAAAGAAGGAAGGATAGCGGTCGAAAGTGTTTACCTCTCGTCTATTATTCGAAACACGATATCATCTCGGAGAGATGATCTCTTAGGAAGAAATTGTTTAAAAAAAATTACATCGACGAATTGTATAATCGATAATCATGGTCCATCGATAATTCTTGACGATCAATGTGTGTTCATTGACGAGCCAAATGGT] [+] EMBL BI509854 [CTCTCTCTCTCTCTCTCTCTCTCTTCGAGCTATTAAATTTTGCTATAAGCGATATACGGTGGAATGGAACAAAGTGATGGAAAAAGAGACGAAATGAGTTGAAAACTAGAGAGAAGGAGAGGCAAAGGAAAAAAAAGACAAAGTTTTCGATCGATATCTAAACGGTGGTAAGGACGGTAGCGCGTTAATGTCCGTGTTTGTGTATCTTTTATTTTGGAAGCGCCAATGCAATGGCCCCACCCATCCCGTTGGGCAGGCTGGCGAGCGTTCAACACAAGTAAGTCAACAATGGCAATAGCGGACTTTTCGTCGTCTTCTTCGTTCTCGTCGTTTTCGTCCTCCTCTTCCTCAGTGATCTCGTCGTCGTCATCGTCAACATGGACAATGTCACCGGTCGAGCCTTGGGATATATCGACGTTCCCATAAGATAAACACGACGAATAGTTCTCTCCCAAGTCGAAAAGAAGGAAGGATAGCGGTCGAAAGTGTTTACCTCTCGTCTATTATTCGAAACACGATATCATCTCGGAGAGATGATCTCTTAGGAAGAAATTGTTTAAAAAAAATTACATCGACGAATTGTATAATCGATAATCATGGTCCATCGATAATTCTTGACGATCAATGTGTGTTCATTGACGAGCCAAATGGT] consensusID : consensus_1304#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 574 fasta sequence [TTTTATCGAGTATCTCTCTCTCTTCGAGCTATTAAATTTTGCTATAAGCGATATACGGTGGAATGGAACAAAGTGATGGAAAAAGAGACGAAATGAGTTGAAAACTAGAGAGAAGGAGAGGCAAAGGAAAAAAAAGACAAAGTTTTCGATCGATATCTAAACGGTGGTAAGGACGGTAGCGCGTTAATGTCCGTGTTTGTGTATCTTTTATTTTGGAAGCGCCAATGCAATGGCCCCACCCATCCCGTTGGGCAGGCTGGCGAGCGTTCAACACAAGTAAGTCAACAATGGCAATAGCGGACTTTTCGTCGTCTTCTTCGTTCTCGTCGTTTTCGTCCTCCTCTTCCTCAGTGATCTCGTCGTCGTCATCGTCAACATGGACAATGTCACCGGTCGAGCCTTGGGATATATCGACGTTCCCATAAGATAAACACGACGAATAGTTCTCTCCCAAGTCGAAAAGAAGGAAGGATAGCGGTCGAAAGTGTTTACCTCTCGTCTATTATTCGAAACACGATATCATCTCGGAGAGATGATCTCTTAGGAAGAAATTGTTTAAAAAAAATTACATCGA] [-] EMBL BI507411 [TTTTATCGAGTATCTCTCTCTCTTCGAGCTATTAAATTTTGCTATAAGCGATATACGGTGGAATGGAACAAAGTGATGGAAAAAGAGACGAAATGAGTTGAAAACTAGAGAGAAGGAGAGGCAAAGGAAAAAAAAGACAAAGTTTTCGATCGATATCTAAACGGTGGTAAGGACGGTAGCGCGTTAATGTCCGTGTTTGTGTATCTTTTATTTTGGAAGCGCCAATGCAATGGCCCCACCCATCCCGTTGGGCAGGCTGGCGAGCGTTCAACACAAGTAAGTCAACAATGGCAATAGCGGACTTTTCGTCGTCTTCTTCGTTCTCGTCGTTTTCGTCCTCCTCTTCCTCAGTGATCTCGTCGTCGTCATCGTCAACATGGACAATGTCACCGGTCGAGCCTTGGGATATATCGACGTTCCCATAAGATAAACACGACGAATAGTTCTCTCCCAAGTCGAAAAGAAGGAAGGATAGCGGTCGAAAGTGTTTACCTCTCGTCTATTATTCGAAACACGATATCATCTCGGAGAGATGATCTCTTAGGAAGAAATTGTTTAAAAAAAATTACATCGA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1304#0 CTCTCTCTCTCTCTCTCTCTCTCTTCGAGCTATTAAATTTTGCTATAAGCGATATACGGT 60 consensus_1304#1 -TTTTATCGAGTATCTCTCTCTCTTCGAGCTATTAAATTTTGCTATAAGCGATATACGGT 59 * * * *********************************************** consensus_1304#0 GGAATGGAACAAAGTGATGGAAAAAGAGACGAAATGAGTTGAAAACTAGAGAGAAGGAGA 120 consensus_1304#1 GGAATGGAACAAAGTGATGGAAAAAGAGACGAAATGAGTTGAAAACTAGAGAGAAGGAGA 119 ************************************************************ consensus_1304#0 GGCAAAGGAAAAAAAAGACAAAGTTTTCGATCGATATCTAAACGGTGGTAAGGACGGTAG 180 consensus_1304#1 GGCAAAGGAAAAAAAAGACAAAGTTTTCGATCGATATCTAAACGGTGGTAAGGACGGTAG 179 ************************************************************ consensus_1304#0 CGCGTTAATGTCCGTGTTTGTGTATCTTTTATTTTGGAAGCGCCAATGCAATGGCCCCAC 240 consensus_1304#1 CGCGTTAATGTCCGTGTTTGTGTATCTTTTATTTTGGAAGCGCCAATGCAATGGCCCCAC 239 ************************************************************ consensus_1304#0 CCATCCCGTTGGGCAGGCTGGCGAGCGTTCAACACAAGTAAGTCAACAATGGCAATAGCG 300 consensus_1304#1 CCATCCCGTTGGGCAGGCTGGCGAGCGTTCAACACAAGTAAGTCAACAATGGCAATAGCG 299 ************************************************************ consensus_1304#0 GACTTTTCGTCGTCTTCTTCGTTCTCGTCGTTTTCGTCCTCCTCTTCCTCAGTGATCTCG 360 consensus_1304#1 GACTTTTCGTCGTCTTCTTCGTTCTCGTCGTTTTCGTCCTCCTCTTCCTCAGTGATCTCG 359 ************************************************************ consensus_1304#0 TCGTCGTCATCGTCAACATGGACAATGTCACCGGTCGAGCCTTGGGATATATCGACGTTC 420 consensus_1304#1 TCGTCGTCATCGTCAACATGGACAATGTCACCGGTCGAGCCTTGGGATATATCGACGTTC 419 ************************************************************ consensus_1304#0 CCATAAGATAAACACGACGAATAGTTCTCTCCCAAGTCGAAAAGAAGGAAGGATAGCGGT 480 consensus_1304#1 CCATAAGATAAACACGACGAATAGTTCTCTCCCAAGTCGAAAAGAAGGAAGGATAGCGGT 479 ************************************************************ consensus_1304#0 CGAAAGTGTTTACCTCTCGTCTATTATTCGAAACACGATATCATCTCGGAGAGATGATCT 540 consensus_1304#1 CGAAAGTGTTTACCTCTCGTCTATTATTCGAAACACGATATCATCTCGGAGAGATGATCT 539 ************************************************************ consensus_1304#0 CTTAGGAAGAAATTGTTTAAAAAAAATTACATCGACGAATTGTATAATCGATAATCATGG 600 consensus_1304#1 CTTAGGAAGAAATTGTTTAAAAAAAATTACATCGA------------------------- 574 *********************************** consensus_1304#0 TCCATCGATAATTCTTGACGATCAATGTGTGTTCATTGACGAGCCAAATGGT 652 consensus_1304#1 ---------------------------------------------------- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |