These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1377#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 427 fasta sequence [GTGCTGCCACTCCTCCAGTCTGGCAAGAAAATCAAGCAGACAGTGGAATGGTGGGAGGTGGATCCGATCAAGATGAACGGTTTACCGTTTCGAGAGGAAGGAAGGAAGGAAGGAAGGAAGTATTAACCCTCGAAGGGAATTTTTTTTCCTTCTCTCTCTCTCAAGAAAGGGAAACCGGTTGTGCGTTCCTTCCAGGACGATGTGAAAGAAGAGGAGGAGAGGAGGGTGATCGTGAATGATCGAACGCGAATTTCCCCTGGCCAGTAGGTTTTTTTACCGATGTAGCTCGTAGGCACTAGCTAATTAAAATAAAGAAGAAAAAAAAAAAATCGGGTAAAGCTGACGAAACAGTAATTACACAAGTTTTTATGGTTAGAACCATATCACGAGCCGAGATCGCGGCGCGTCGATCGATCGGATTCTTCTT] [+] EMBL BI507931 [GTGCTGCCACTCCTCCAGTCTGGCAAGAAAATCAAGCAGACAGTGGAATGGTGGGAGGTGGATCCGATCAAGATGAACGGTTTACCGTTTCGAGAGGAAGGAAGGAAGGAAGGAAGGAAGTATTAACCCTCGAAGGGAATTTTTTTTCCTTCTCTCTCTCTCAAGAAAGGGAAACCGGTTGTGCGTTCCTTCCAGGACGATGTGAAAGAAGAGGAGGAGAGGAGGGTGATCGTGAATGATCGAACGCGAATTTCCCCTGGCCAGTAGGTTTTTTTACCGATGTAGCTCGTAGGCACTAGCTAATTAAAATAAAGAAGAAAAAAAAAAAATCGGGTAAAGCTGACGAAACAGTAATTACACAAGTTTTTATGGTTAGAACCATATCACGAGCCGAGATCGCGGCGCGTCGATCGATCGGATTCTTCTT] consensusID : consensus_1377#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 315 fasta sequence [GTGCTGCCACTCCTCCAGTCTGGCAAGAAAATCAAGCAGACAGTGGAATGGTGGGAGGTGGATCCGATCAAGATGAACGGTTTACCGTTTCGAGAGGAAGGAAAGAAGGAAGGAAGGAAGGAAGGAAGGAAGTATTAACCCTCGAAGGGAATTTTTTTTCCTTCTCTCTCTCTCAAGAAAGGGAAACCGGTTGTGCGTTCCTTCCAGGACGATGTGAAAGAAGAGGAGGAGAGGAGGGTGATCGTGAATGATCGAACGCGAATTTCCCCTGGCCAGTAGGTTTTTTTACCGATGTAGCTCGTAGGCATTAGCTAA] [+] EMBL BI506760 [GTGCTGCCACTCCTCCAGTCTGGCAAGAAAATCAAGCAGACAGTGGAATGGTGGGAGGTGGATCCGATCAAGATGAACGGTTTACCGTTTCGAGAGGAAGGAAAGAAGGAAGGAAGGAAGGAAGGAAGGAAGTATTAACCCTCGAAGGGAATTTTTTTTCCTTCTCTCTCTCTCAAGAAAGGGAAACCGGTTGTGCGTTCCTTCCAGGACGATGTGAAAGAAGAGGAGGAGAGGAGGGTGATCGTGAATGATCGAACGCGAATTTCCCCTGGCCAGTAGGTTTTTTTACCGATGTAGCTCGTAGGCATTAGCTAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1377#0 GTGCTGCCACTCCTCCAGTCTGGCAAGAAAATCAAGCAGACAGTGGAATGGTGGGAGGTG 60 consensus_1377#1 GTGCTGCCACTCCTCCAGTCTGGCAAGAAAATCAAGCAGACAGTGGAATGGTGGGAGGTG 60 ************************************************************ consensus_1377#0 GATCCGATCAAGATGAACGGTTTACCGTTTCGAGAGGAAGGAA------------GGAAG 108 consensus_1377#1 GATCCGATCAAGATGAACGGTTTACCGTTTCGAGAGGAAGGAAAGAAGGAAGGAAGGAAG 120 ******************************************* ***** consensus_1377#0 GAAGGAAGGAAGTATTAACCCTCGAAGGGAATTTTTTTTCCTTCTCTCTCTCTCAAGAAA 168 consensus_1377#1 GAAGGAAGGAAGTATTAACCCTCGAAGGGAATTTTTTTTCCTTCTCTCTCTCTCAAGAAA 180 ************************************************************ consensus_1377#0 GGGAAACCGGTTGTGCGTTCCTTCCAGGACGATGTGAAAGAAGAGGAGGAGAGGAGGGTG 228 consensus_1377#1 GGGAAACCGGTTGTGCGTTCCTTCCAGGACGATGTGAAAGAAGAGGAGGAGAGGAGGGTG 240 ************************************************************ consensus_1377#0 ATCGTGAATGATCGAACGCGAATTTCCCCTGGCCAGTAGGTTTTTTTACCGATGTAGCTC 288 consensus_1377#1 ATCGTGAATGATCGAACGCGAATTTCCCCTGGCCAGTAGGTTTTTTTACCGATGTAGCTC 300 ************************************************************ consensus_1377#0 GTAGGCACTAGCTAATTAAAATAAAGAAGAAAAAAAAAAAATCGGGTAAAGCTGACGAAA 348 consensus_1377#1 GTAGGCATTAGCTAA--------------------------------------------- 315 ******* ******* consensus_1377#0 CAGTAATTACACAAGTTTTTATGGTTAGAACCATATCACGAGCCGAGATCGCGGCGCGTC 408 consensus_1377#1 ------------------------------------------------------------ consensus_1377#0 GATCGATCGGATTCTTCTT 427 consensus_1377#1 ------------------- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |