These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1453#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 549 fasta sequence [GCACACGGACACACACACACACACACACGCTCGCGCACTCGCTCGCACGTACGCACGTGCATACACACGTACACACACATACGTACACACACGCGCACACACACGTCCCCCGATATCCATCNAGAAAAGCCCGCGCACTTTGTCCGAATATACGTGTTGAATCGGAGCGAAAACGTGGAACGGGGGAAAGAGAGAGGGAAGAAAGAGAAGGAAAGTGAAGATAAAAGAGAGAGAGAGAGAGGGAGAGACGAGTGGTTGGTGTGCCGCTCCTTTCATGCAGTGGAAAATCGCGGGCGGAAACACGTGCAATATAACGACGCTTCGGAGATTCTCGGAGGCGCGCGGACGCGCGACGAATTAAACACACGCTCGTGCCGTCCTGCGCCGTGATCGCGTCGCCGTCCTCTCTTCCGCACGCGCTTACTGTGTAACCCAGTGTGTAAACGGCCAAAAGGCGTTTCGCCCGTCGAAGCCCCACTCTCCCGTGGATTGGACGATTGGAAGTGAAAGGATATTAAAGAAAAAAGAAGAAGAGAAAAAATAGAAAAT] [+] EMBL BI506262 [GCACACGGACACACACACACACACACACGCTCGCGCACTCGCTCGCACGTACGCACGTGCATACACACGTACACACACATACGTACACACACGCGCACACACACGTCCCCCGATATCCATCNAGAAAAGCCCGCGCACTTTGTCCGAATATACGTGTTGAATCGGAGCGAAAACGTGGAACGGGGGAAAGAGAGAGGGAAGAAAGAGAAGGAAAGTGAAGATAAAAGAGAGAGAGAGAGAGGGAGAGACGAGTGGTTGGTGTGCCGCTCCTTTCATGCAGTGGAAAATCGCGGGCGGAAACACGTGCAATATAACGACGCTTCGGAGATTCTCGGAGGCGCGCGGACGCGCGACGAATTAAACACACGCTCGTGCCGTCCTGCGCCGTGATCGCGTCGCCGTCCTCTCTTCCGCACGCGCTTACTGTGTAACCCAGTGTGTAAACGGCCAAAAGGCGTTTCGCCCGTCGAAGCCCCACTCTCCCGTGGATTGGACGATTGGAAGTGAAAGGATATTAAAGAAAAAAGAAGAAGAGAAAAAATAGAAAAT] consensusID : consensus_1453#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 383 fasta sequence [CGGACACACACACACACACACGCTCGCGCACTCGCTCGCACGTACGCACGTGCATACACACGTACACACACACGCACGCACACACACGCGCACACACACGCGCACACACACGTCCCCCGATATCCGTNGTCGTCCATCGAGAAAAGCCCNNGCACTTTGTCCGAATATACGTGTTGAATCGGAGCGAAAACGTGGAACGGGGGAAAGAGAGAGGGAAGAAAGAGAAGGAAAGTGAAGATAAAAGAGAGAGAGAGAGAGGGAGAGACGAGTGGTTGGTGTGCCGCTCCTTTNNTGCAGTGGAAAATCNNGGGCGGAAACACGTGCAATATAACGACGCTTGGGAGATTCTCGGAGGCGCGCGGACGCGCGACGAATTAAACACA] [+] EMBL BI507548 [CGGACACACACACACACACACGCTCGCGCACTCGCTCGCACGTACGCACGTGCATACACACGTACACACACACGCACGCACACACACGCGCACACACACGCGCACACACACGTCCCCCGATATCCGTNGTCGTCCATCGAGAAAAGCCCNNGCACTTTGTCCGAATATACGTGTTGAATCGGAGCGAAAACGTGGAACGGGGGAAAGAGAGAGGGAAGAAAGAGAAGGAAAGTGAAGATAAAAGAGAGAGAGAGAGAGGGAGAGACGAGTGGTTGGTGTGCCGCTCCTTTNNTGCAGTGGAAAATCNNGGGCGGAAACACGTGCAATATAACGACGCTTGGGAGATTCTCGGAGGCGCGCGGACGCGCGACGAATTAAACACA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1453#0 -----GCACACGGACACACACACACACACACACGCTCGCGCACTCGCTCGCACGTACGCA 55 consensus_1453#1 CGGACACACACACACACACACGCTCGCGCACTCGCTCGCACGTACGCACGTGCATACACA 60 ***** ******** * * * *** ******* * *** ** * *** ** consensus_1453#0 CGTGCATACACACGTACACACACATACGT--ACACACACGCGCACACACACGTCCCCCGA 113 consensus_1453#1 CGTACACACACACGCACGCACACACACGCGCACACACACGCGCACACACACGTCCCCCGA 120 *** ** ******* ** ****** *** ***************************** consensus_1453#0 TATCC----------ATCNAGAAAAGCCCGCGCACTTTGTCCGAATATACGTGTTGAATC 163 consensus_1453#1 TATCCGTNGTCGTCCATCGAGAAAAGCCCNNGCACTTTGTCCGAATATACGTGTTGAATC 180 ***** *** ********** ***************************** consensus_1453#0 GGAGCGAAAACGTGGAACGGGGGAAAGAGAGAGGGAAGAAAGAGAAGGAAAGTGAAGATA 223 consensus_1453#1 GGAGCGAAAACGTGGAACGGGGGAAAGAGAGAGGGAAGAAAGAGAAGGAAAGTGAAGATA 240 ************************************************************ consensus_1453#0 AAAGAGAGAGAGAGAGAGGGAGAGACGAGTGGTTGGTGTGCCGCTCCTTTCATGCAGTGG 283 consensus_1453#1 AAAGAGAGAGAGAGAGAGGGAGAGACGAGTGGTTGGTGTGCCGCTCCTTTNNTGCAGTGG 300 ************************************************** ******** consensus_1453#0 AAAATCGCGGGCGGAAACACGTGCAATATAACGACGCTTCGGAGATTCTCGGAGGCGCGC 343 consensus_1453#1 AAAATCNNGGGCGGAAACACGTGCAATATAACGACGCTTGGGAGATTCTCGGAGGCGCGC 360 ****** ******************************* ******************** consensus_1453#0 GGACGCGCGACGAATTAAACACACGCTCGTGCCGTCCTGCGCCGTGATCGCGTCGCCGTC 403 consensus_1453#1 GGACGCGCGACGAATTAAACACA------------------------------------- 383 *********************** consensus_1453#0 CTCTCTTCCGCACGCGCTTACTGTGTAACCCAGTGTGTAAACGGCCAAAAGGCGTTTCGC 463 consensus_1453#1 ------------------------------------------------------------ consensus_1453#0 CCGTCGAAGCCCCACTCTCCCGTGGATTGGACGATTGGAAGTGAAAGGATATTAAAGAAA 523 consensus_1453#1 ------------------------------------------------------------ consensus_1453#0 AAAGAAGAAGAGAAAAAATAGAAAAT 549 consensus_1453#1 -------------------------- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |