These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1491#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 431 fasta sequence [CGTGCGAAATTTGCTTAACAATTATGGGAGTATCGATCCAGCTATCAAAGTATCCGCAAGCGATCCAAATTTATCGACTTACTACAATTAAGAGATTCTGACTATCAAACGCACGATATTGACACGAAATTTGGAACGCTTGACGCGAGATATATATATATATATATATATTTATATATATATATATATATTTTTTTTTTAATAGATTATTGTATCTGCAGAGAATATATATATATATGTATAATGTAACAATCATGAGACACTTTGTTTGGTAACTTAAGTTAGGACTTTTTTTTTTTTTTTAACTTTATTTACAGCTTACAACGAGCAACATCAATCACCCTTCAACTACCTAATGTTTTCGCGATTCGGGCAATTCAATGCGCCTTTGTACACGTTCCACGTACTCCCCTTTTCTTTGGCAATATTAT] [+] EMBL BI516292 [CGTGCGAAATTTGCTTAACAATTATGGGAGTATCGATCCAGCTATCAAAGTATCCGCAAGCGATCCAAATTTATCGACTTACTACAATTAAGAGATTCTGACTATCAAACGCACGATATTGACACGAAATTTGGAACGCTTGACGCGAGATATATATATATATATATATATTTATATATATATATATATATTTTTTTTTTAATAGATTATTGTATCTGCAGAGAATATATATATATATGTATAATGTAACAATCATGAGACACTTTGTTTGGTAACTTAAGTTAGGACTTTTTTTTTTTTTTTAACTTTATTTACAGCTTACAACGAGCAACATCAATCACCCTTCAACTACCTAATGTTTTCGCGATTCGGGCAATTCAATGCGCCTTTGTACACGTTCCACGTACTCCCCTTTTCTTTGGCAATATTAT] consensusID : consensus_1491#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 348 fasta sequence [GGCAATTCAATGCGCCTTTGTACACGTTCCACGTACTCCCCTTTTCTTTGGCAATATTATTAAAGAGACGAAGATACACTCTACAACTTTTATATTACGTTAGGCACTAGAAGAATCACAGTCATGAAACTATGACGATACCGCGCGAGCGGTAAGGTCATTAGGTGTATAAAAAAAAAAAAAAAAAGAAGAAGAAATGCTTCAACACACTTCGAGAAATGAGAAGGAATCGAATCAAGATTATCACTGATCGCGGTAATCATTTTATATCGGGGATATCCTCGTCATTCCTNNCTCGAGATCTCTTGACTACTCGATCGCTAAAAAATTACGTAAAGAAAAATTGCG] [+] EMBL BI515179 [GGCAATTCAATGCGCCTTTGTACACGTTCCACGTACTCCCCTTTTCTTTGGCAATATTATTAAAGAGACGAAGATACACTCTACAACTTTTATATTACGTTAGGCACTAGAAGAATCACAGTCATGAAACTATGACGATACCGCGCGAGCGGTAAGGTCATTAGGTGTATAAAAAAAAAAAAAAAAAGAAGAAGAAATGCTTCAACACACTTCGAGAAATGAGAAGGAATCGAATCAAGATTATCACTGATCGCGGTAATCATTTTATATCGGGGATATCCTCGTCATTCCTNNCTCGAGATCTCTTGACTACTCGATCGCTAAAAAATTACGTAAAGAAAAATTGCG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1491#0 CGTGCGAAATTTGCTTAACAATTATGGGAGTATCGATCCAGCTATCAAAGTATCCGCAAG 60 consensus_1491#1 -------------------------GGCAAT-TCAATGCGCCTTTGTACACGTTC-CACG 33 ** * * ** ** * ** * * * * ** * consensus_1491#0 CGATCCAAATTTATCGACTTACTACAATTAAGAGATTCTGACTATCAAACGCACGATATT 120 consensus_1491#1 TACTCCCCTTTTCTTTGGCAATATTATTAAAGAGAC---GAAGATACACTCTACAACTTT 90 *** *** * * * * ****** ** ** * ** * ** consensus_1491#0 GACACGAAATTTGGAACGCTTGACGCGAGATATATATATATATATATATATTTATATATA 180 consensus_1491#1 TATATTACGTTAGGCACTAGAAGAATCACAGTCATGAAACTATGACGATACCGCGCGAGC 150 * * * ** ** ** * * ** * *** *** * consensus_1491#0 TATATATATATTTTTTTTTTAATAGATTATTGTATCTGCAGAGAATATATATATATATGT 240 consensus_1491#1 GGTAAGGTCATTAGGTGTATAAAAAAAAAAAAAAAAAGAAGAAGAAATGCTTCAACACAC 210 ** *** * * *** * * * * * *** * ** * * * consensus_1491#0 ATAATGTAACAATCATGAGACACTTTGTTTGGTAACTTAAGTTAGGACTTTTTTTTTTTT 300 consensus_1491#1 TTCGAGAAATGAGAAGGAATCGAATCA--AGATTATCACTGATCGCGGTAATCATTTTAT 268 * * ** * * ** * * * * * * * * * * **** * consensus_1491#0 TTTAACTTTATTTACAGCTTACAACGAGCAACATCAATC-ACCCTTCAACTACCTAATGT 359 consensus_1491#1 ATCGGGGATATCCTCGTCATTCCTNNCTCGAGATCTCTTGACTACTCGATCGCTAAAAAA 328 * *** * * * * * * *** * ** ** * * ** consensus_1491#0 TTTCGCGATTCGGGCAATTCAATGCGCCTTTGTACACGTTCCACGTACTCCCCTTTTCTT 419 consensus_1491#1 TTACGTAAA--GAAAAATTGCG-------------------------------------- 348 ** ** * * **** consensus_1491#0 TGGCAATATTAT 431 consensus_1491#1 ------------ |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |