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These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_15#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 630 fasta sequence
[TTGGAGGATATGCGACAGATCGTTACCACAAAAGGAATATAATCAGTGCATCGCCGAAGCTGTAAGAGACGCGGTCGTTTCATTAGCCGGAGGTTTGAAGAGTTTCAAAATTCTGCCGATCGAGCCATTGGCCGTGGACAGCGTGAAAATTGGAGAATCGCAAGGATCGGTTACTTTGAGGCAAGAATATAAAAATATCAAGTTATACGGACTTACGAAAAACCTTGAGATCAAAAATTACAACATAGACTGGGATAAATGTATACTGTCATCGGAATCGTACAATCCTCAAGTAGATTTTGTCGCCGATTACAAAATCGAAGGAAAAGTGTTGCTTTTACCTGTCAGAGGAGCGGGAAAATCAAACATAACTATGTATGATTTGAAATCACACAACGACATATACTGCGAAAAATACGAAAAGAACGGAGAAACTTACTTGAGAATCAAGAAGCATGCGGTGAAATTCAATCCTGCTAAAGTGAAGTTGCGATTTGAAAACCTGTTCGATGGCAATAAGGAACTGGGAGAACAAATGAATCGGTTTATAAATGAAAATTCCGAGTTACTTTTCAAAGAGCTGCAAGCCGCTTACGAAGAAACCTTCAGTCTAGTTTTTACGAAAATCGA]
[+] EMBL BI504232 [TTGGAGGATATGCGACAGATCGTTACCACAAAAGGAATATAATCAGTGCATCGCCGAAGCTGTAAGAGACGCGGTCGTTTCATTAGCCGGAGGTTTGAAGAGTTTCAAAATTCTGCCGATCGAGCCATTGGCCGTGGACAGCGTGAAAATTGGAGAATCGCAAGGATCGGTTACTTTGAGGCAAGAATATAAAAATATCAAGTTATACGGACTTACGAAAAACCTTGAGATCAAAAATTACAACATAGACTGGGATAAATGTATACTGTCATCGGAATCGTACAATCCTCAAGTAGATTTTGTCGCCGATTACAAAATCGAAGGAAAAGTGTTGCTTTTACCTGTCAGAGGAGCGGGAAAATCAAACATAACTATGTATGATTTGAAATCACACAACGACATATACTGCGAAAAATACGAAAAGAACGGAGAAACTTACTTGAGAATCAAGAAGCATGCGGTGAAATTCAATCCTGCTAAAGTGAAGTTGCGATTTGAAAACCTGTTCGATGGCAATAAGGAACTGGGAGAACAAATGAATCGGTTTATAAATGAAAATTCCGAGTTACTTTTCAAAGAGCTGCAAGCCGCTTACGAAGAAACCTTCAGTCTAGTTTTTACGAAAATCGA]
[+] EMBL BI507633 [ ATCGTTACCACAAAAGGAATATAATCAGTGCATCGCCGAAGCTGTAAGAGACGCGGTCGTTTCATTAGCCGGAGGTTTGAAGAGTTTCAAAATTCTGCCGATCGAGCCATTGGCCGTGGACAGCGTGAAAATTGGAGAATCGCAAGGATCGGTTACTTTGAGGCAAGAATATAAAAATATCAAGTTATACGGACTTACGAAAAACCTTGAGATCAAAAATTACAACATAGACTGGGATAAATGTATACTGTCATCGGAATCGTACAATCCTCAAGTAGATTTTGTCGCCGATTACAAAATCGAAGGAAAAGTGTTGCTTTTACCTGTCAGAGGAGCGGGAAAATCAAACATAACTATGTATGATTTGAAATCACACAACGACATATACTGCGAAAAATACGAAAAGAACGGAGAAACTTACTTGAGAATCAAGAAGCATGCGGTGAAATTCAATCCTGCTAAAGTGAAGTTGCGATTTGAAAACCTGTTCGATGGCAATAAGGAACTGGGAGAACAAATGAATCGGTTTATAAATGAAAATTCCGAGTTACTTTTCAAAGAGCTGCAAGCCGCTTACGAAGAAACCT ]
[+] EMBL BI512189 [ CGCGGTCGTTTCATTAGCCGGAGGTTTGAAGAGTTTCAAAATTCTGCCGATCGAGCCATTGGCCGTGGACAGCGTGAAAATTGGAGAATCGCAAGGATCGGTTACTTTGAGGCAAGAATATAAAAATATCAAGTTATACGGACTTACGAAAAACCTTGAGATCAAAAATTACAACATAGACTGGGATAAATGTATACTGTCATCGGAATCGTACAATCCTCAAGTAGATTTTGTCGCCGATTACAAAATCGAAGGAAAAGTGTTGCTTTTACCTGTCAGAGGAGCGGGAAAATCAAACATAACTATGTATGATTTGAAATCACACAACGACATATACTGCGAAAAATACGAAAAGAACGGAGAAACTTACTTGAGAATCAAGAAGCATGCGGTGAAATTCAATCCTGCTAAAGTGAAGTTGCGATTTGAAAACCTGTTCGATGGCAATAAGGAACTGGG ]
consensusID : consensus_15#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 541 fasta sequence
[CGCTTGGCCGTTTGCTTCACATGTGTATGTGTGTGTATATGTGTATATGTACATGTGTGCGTGCATGTACACACACACACATACATACATACATACAGAGGGAAGAGAAATATAGAAGCGGGAGGAAGAAGGCACTGTTGAAGAAGTCACACGCGCACGCATATAACGTAATACTTGTTCACACGTACACGAGAGAGGAAAACACACAGAGTCCGCAGCCGCGGAAGAATTCTTTTAGGAAAATCGAGCCCCGCGCTGTTTTCGAAACAGGAGAGAACGGATGATCGGTTTTCAGAGAACGGAAAAGGAAGGAAAAAAAAGAAGAAAAAAAAAAAAAAAAGAAAAAAAAAAGAAGAAGAAGAGGAAGTAAACTTTTAAACCGATTTTGTCTCTAGTAGTGGCGCGAAAAAATAGACAGAGAAGAAAAATCGTGGATACCGAAAAGGATGGTGGTGTGCCCTGCGTGCTNNATACGACGGCCAACTCGGCACGTAATTTGCCCAAGTGCCTTCCCGTTGGTCGAGTCATGCTGTAATTCGTA]
[+] EMBL BI509337 [CGCTTGGCCGTTTGCTTCACATGTGTATGTGTGTGTATATGTGTATATGTACATGTGTGCGTGCATGTACACACACACACATACATACATACATACAGAGGGAAGAGAAATATAGAAGCGGGAGGAAGAAGGCACTGTTGAAGAAGTCACACGCGCACGCATATAACGTAATACTTGTTCACACGTACACGAGAGAGGAAAACACACAGAGTCCGCAGCCGCGGAAGAATTCTTTTAGGAAAATCGAGCCCCGCGCTGTTTTCGAAACAGGAGAGAACGGATGATCGGTTTTCAGAGAACGGAAAAGGAAGGAAAAAAAAGAAGAAAAAAAAAAAAAAAAGAAAAAAAAAAGAAGAAGAAGAGGAAGTAAACTTTTAAACCGATTTTGTCTCTAGTAGTGGCGCGAAAAAATAGACAGAGAAGAAAAATCGTGGATACCGAAAAGGATGGTGGTGTGCCCTGCGTGCTNNATACGACGGCCAACTCGGCACGTAATTTGCCCAAGTGCCTTCCCGTTGGTCGAGTCATGCTGTAATTCGTA]
consensusID : consensus_15#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 528 fasta sequence
[GTAATTTGCCCAAGTGCCTTCCCGTTGGTCGAGTCATGCTGTAATTCGTATATATATATATATACCGTGTATTATTCGTCTCGTCCCGATTTCAAACTCGTCGAACTCTCCCCCTTCTCCCGTCGGATCCACGTTATTATTTATATTATACACGCGTGCATGCGCGCATGGCGATAACGTGGGGATAATCGCGCATCGAGTTTGTGCGTTTGAAAAGAAAAGAGGAAGAAACGGAGAAAAAAAAAAAAAAAAAAAATGAAAAAATTATTAGCAATGCGAAAAATTCTTCAAAGTTGATAATGAAATAATGGAAAATTTTCCTATCTATAACTTATCTGTAACATCAACTTTTCAAAACTTTTGGTCGATACAACACACGTACATATACACATACACACATACATACATACATACAGAGGGAAGAGAAATATAGAAGCGGGAGTAAGAAGGCACTGTTGAAGNAGTCACACGCGCACGCATATAACGTAATACTTGTTCACACGTACACGAGAGAGAGAACAAATTTTC]
[+] EMBL BI504894 [GTAATTTGCCCAAGTGCCTTCCCGTTGGTCGAGTCATGCTGTAATTCGTATATATATATATATACCGTGTATTATTCGTCTCGTCCCGATTTCAAACTCGTCGAACTCTCCCCCTTCTCCCGTCGGATCCACGTTATTATTTATATTATACACGCGTGCATGCGCGCATGGCGATAACGTGGGGATAATCGCGCATCGAGTTTGTGCGTTTGAAAAGAAAAGAGGAAGAAACGGAGAAAAAAAAAAAAAAAAAAAATGAAAAAATTATTAGCAATGCGAAAAATTCTTCAAAGTTGATAATGAAATAATGGAAAATTTTCCTATCTATAACTTATCTGTAACATCAACTTTTCAAAACTTTTGGTCGATACAACACACGTACATATACACATACACACATACATACATACATACAGAGGGAAGAGAAATATAGAAGCGGGAGTAAGAAGGCACTGTTGAAGNAGTCACACGCGCACGCATATAACGTAATACTTGTTCACACGTACACGAGAGAGAGAACAAATTTTC]
consensusID : consensus_15#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 505 fasta sequence
[TAATTGTACGGAGAGAGAGCAGCTAGAATGAGGTGTTCCCGCGAGGTGGTCGCTCGCGTTCGGCCCGCGCGTTGATTCGAGCTCGCGCGATACGCCACGCCGATATCCGTGCTGATACAGTGCGGAAATCCACCGAACGAACCGAACTCAGTGCCGAGGCTGACCGAAAAGAGAGTAACGGAGAGGAAGCGACGGATATCTATATAGGGAGAGGGAGATCGAGAGCGCGAGGACAGGAAGGAAGAGAGAAAGGGAAAGAGAAACGGTGTCGCATCGCAAGTTGTTTCGGTATACGGTGCACGAGACGGAGAAACGGTCGCGAGAAGATCACGAGAGAGGATTGGGTGAAAATTGGAGAAAATCGAGCAAGAAGAAAAGAAGCAAAGAGAGAAGAAAGACGGGAAAGAGACGTGTGAATANNAGAGAAATTCGAGAGAAAAACGGGACGAGAAAGAAAAAGAGAGGGAGAGAGAGAGAGAGAGAAAGAGAGAGAAGAAACGGCGAG]
[+] EMBL BI515492 [TAATTGTACGGAGAGAGAGCAGCTAGAATGAGGTGTTCCCGCGAGGTGGTCGCTCGCGTTCGGCCCGCGCGTTGATTCGAGCTCGCGCGATACGCCACGCCGATATCCGTGCTGATACAGTGCGGAAATCCACCGAACGAACCGAACTCAGTGCCGAGGCTGACCGAAAAGAGAGTAACGGAGAGGAAGCGACGGATATCTATATAGGGAGAGGGAGATCGAGAGCGCGAGGACAGGAAGGAAGAGAGAAAGGGAAAGAGAAACGGTGTCGCATCGCAAGTTGTTTCGGTATACGGTGCACGAGACGGAGAAACGGTCGCGAGAAGATCACGAGAGAGGATTGGGTGAAAATTGGAGAAAATCGAGCAAGAAGAAAAGAAGCAAAGAGAGAAGAAAGACGGGAAAGAGACGTGTGAATANNAGAGAAATTCGAGAGAAAAACGGGACGAGAAAGAAAAAGAGAGGGAGAGAGAGAGAGAGAGAAAGAGAGAGAAGAAACGGCGAG]
consensusID : consensus_15#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 505 fasta sequence
[TTTTGAATTTTATTAATTACTTTATTCGAATGCGTTGTATGCGCGCAATACAAAGCTAAAGAATATATAAATTAAGCGAAAACATTAGCGTCGATAAGAATTTGCAGGATATTAACTAAAGTTTGAGCTAGGAGTACTGCTGACACGTTGGCACCAGACACGATAGATGAAACCAAACTGTTGATTTGGGAAACGACATCCACGTTCGATTCGCCTTTGACACTGATTGATGTTTTGGCGGACACATCGCTGACCAACATGGCTACGCAGAAGGCAGCTAGGACGACGATAGCAACGATTTTGCTCATTTTGATTTTTGTGCTGTTTGGAATTGCTTTTAGAAAGCTCGGTTCGATCTCGTGCCGCTCGTGCCGAATTCGGCACGAGAAGAGTTTCAAAATTCTGCCGATCGAGCCATTGGCCGTGGACAGCGTGAAAATTGGAGAATCGCAAGGATCGGTTACTTTGAGGCAAGAATATAAAAATATCAAGTTATACGGACTTA]
[+] EMBL BI946546 [TTTTGAATTTTATTAATTACTTTATTCGAATGCGTTGTATGCGCGCAATACAAAGCTAAAGAATATATAAATTAAGCGAAAACATTAGCGTCGATAAGAATTTGCAGGATATTAACTAAAGTTTGAGCTAGGAGTACTGCTGACACGTTGGCACCAGACACGATAGATGAAACCAAACTGTTGATTTGGGAAACGACATCCACGTTCGATTCGCCTTTGACACTGATTGATGTTTTGGCGGACACATCGCTGACCAACATGGCTACGCAGAAGGCAGCTAGGACGACGATAGCAACGATTTTGCTCATTTTGATTTTTGTGCTGTTTGGAATTGCTTTTAGAAAGCTCGGTTCGATCTCGTGCCGCTCGTGCCGAATTCGGCACGAGAAGAGTTTCAAAATTCTGCCGATCGAGCCATTGGCCGTGGACAGCGTGAAAATTGGAGAATCGCAAGGATCGGTTACTTTGAGGCAAGAATATAAAAATATCAAGTTATACGGACTTA]
consensusID : consensus_15#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 504 fasta sequence
[ACGAGAGAGGAAAACACACAGAGTCCGTAGCCGCGGAAGAATTCTTTTAGGAAAATCGAGCCCCGCGCTGTTTTCGAAACAGGAGAGAACGGATGATCGGTTTTCAGAGAACGGAAAAAGGGGGATTAGAGAACAAATTTTCGGGGAGGGGTTGACACGCGTGCGACGATGATCTCCCGGAAACGCAGTTAAAAAAAAAAAATAATGGTCCTTTTTTAATCTGTTAACCGGGCTTTTTATCAGAGGGAAGAAAAAACGAACGAGTTAAATAATAAAAAAAACTAGCTACTTGGACTTTTTGAAGCTCGTTCGACGATGAAATTTCTATTTTATGGTGTTTTCGTACGTGGTGGTTCGGAGCGGGCCAAGATAGAGGGAGAGGGAGAGATACGCGTACACGTAGAAAGAGAAAGAGAGGAAAAGAAAGATAGAGGGAGAGGGAGATCGAGAGCGCGAGGACAGGAAGGAAGAGAGAAAGGGAAAGAGAAACGGTGTCGCATCGCA]
[+] EMBL BI509176 [ACGAGAGAGGAAAACACACAGAGTCCGTAGCCGCGGAAGAATTCTTTTAGGAAAATCGAGCCCCGCGCTGTTTTCGAAACAGGAGAGAACGGATGATCGGTTTTCAGAGAACGGAAAAAGGGGGATTAGAGAACAAATTTTCGGGGAGGGGTTGACACGCGTGCGACGATGATCTCCCGGAAACGCAGTTAAAAAAAAAAAATAATGGTCCTTTTTTAATCTGTTAACCGGGCTTTTTATCAGAGGGAAGAAAAAACGAACGAGTTAAATAATAAAAAAAACTAGCTACTTGGACTTTTTGAAGCTCGTTCGACGATGAAATTTCTATTTTATGGTGTTTTCGTACGTGGTGGTTCGGAGCGGGCCAAGATAGAGGGAGAGGGAGAGATACGCGTACACGTAGAAAGAGAAAGAGAGGAAAAGAAAGATAGAGGGAGAGGGAGATCGAGAGCGCGAGGACAGGAAGGAAGAGAGAAAGGGAAAGAGAAACGGTGTCGCATCGCA]
consensusID : consensus_15#6 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 492 fasta sequence
[TTTTTTGAATTTTATTAATTACTTTATTCGAATGCGTTGTATGCGCGCAATACAAAGCTAAAGAATATATAAATTAAGCGAAAACATTAGCGTCGATAAGAATTTGCAGGATATTAACTAAAGTTTGAGCTAGGAGTACTGCTGACACGTTGGCACCAGACACGATAGATGAAACCAAACTGTTGATTTGGGAAACGACATCCACGTTCGATTCGCCTTTGACACTGATTGATGTTTTGGCGGACACATCGCTGACCAACATGGCTACGCAGAAGGCAGCTAGGACGACGACAGCAACGATTTTGCTCATTTTGATTTTTGTGCTGTTTGGAATTGCTTTTAGAAAGCTCGGTTCGATCTGAATCTCTATTTTATGGTGTTTTCGTACGTGGTGGTTCGGAGAGGTGATAAAAGTGATAAGGGCGAGAGAAAGAAAGNNNAGAAGAAAGAGAGAGTATATATTTTTAGTTTTTTAAGAAGGATAGTGAAAGT]
[-] EMBL BI946503 [TTTTTTGAATTTTATTAATTACTTTATTCGAATGCGTTGTATGCGCGCAATACAAAGCTAAAGAATATATAAATTAAGCGAAAACATTAGCGTCGATAAGAATTTGCAGGATATTAACTAAAGTTTGAGCTAGGAGTACTGCTGACACGTTGGCACCAGACACGATAGATGAAACCAAACTGTTGATTTGGGAAACGACATCCACGTTCGATTCGCCTTTGACACTGATTGATGTTTTGGCGGACACATCGCTGACCAACATGGCTACGCAGAAGGCAGCTAGGACGACGACAGCAACGATTTTGCTCATTTTGATTTTTGTGCTGTTTGGAATTGCTTTTAGA ]
[-] EMBL AY055108 [ CTTTATTCGAATGCGTTGTATGCGCGCAATACAAAGCTAAAGAATATATAAATTAAGCGAAAACATTAGCGTCGATAAGAATTTGCAGGATATTAACTAAAGTTTGAGCTAGGAGTACTGCTGACACGTTGGCACCAGACACGATAGATGAAACCAAACTGTTGATTTGGGAAACGACATCCACGTTCGATTCGCCTTTGACACTGATTGATGTTTTGGCGGACACATCGCTGACCAACATGGCTACGCAGAAGGCAGCTAGGACGACGACAGCAACGATTTTGCTCATTTTGATTTTTGTGCTGTTTGGAATTGCTTTTAGAAAGC ]
[+] EMBL BI507403 [ AGTTTGAGCTAGGAGTACTGCTGACACGTTGGCACCAGACACGATAGATGAAACCAAACTGTTGATTTGGGAAACGACATCCACGTTCGATTCGCCTTTGACACTGATTGATGTTTTGGCGGACACATCGCTGACCAACATGGCTACGCAGAAGGCAGCTAGGACGACGACAGCAACGATTTTGCTCATTTTGATTTTTGTGCTGTTTGGAATTGCTTTTAGAAAGCTCGGTTCGATCTGAATCTCTATTTTATGGTGTTTTCGTACGTGGTGGTTCGGAGAGGTGATAAAAGTGATAAGGGCGAGAGAAAGAAAGTATAGAAGAAAGAGAGAGTATATATTTTTAGTTTTTTAAGAAGGATAGTGAAAGT]
[+] EMBL BI507720 [ AGTTTGAGCTAGGAGTACTGCTGACACGTTGGCACCAGACACGATAGATGAAACCAAACTGTTGATTTGGGAAACGACATCCACGTTCGATTCGCCTTTGACACTGATTGATGTTTTGGCGGACACATCGCTGACCAACATGGCTACGCAGAAGGCAGCTAGGACGACGACAGCAACGATTTTGCTCATTTTGATTTTTGTGCTGTTTGGAATTGCTTTTAGAAAGCTCGGTTCGATCTGAATCTCTATTTTATGGTGTTTTCGTACGTGGTGGTTCGGAGAGGTGATAAAAGTGATAAGGGCGAGAGAAAGAAAGNNNAGAAGAAAGAGAGAGTATATATTTTTAGTTTTTTAAGAAGGATAGTGAAAGT]
consensusID : consensus_15#7 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 412 fasta sequence
[GAGGAAAACACACAGAGTCCGTAGCCGCGGAAGAATTCTTTTAGGAAAATCGAGCCCCGCGCTGTTTTCGAAACAGGAGAGAACGGATGATCGGTTTTCAGAGAACGGAAAAAGGGGGATTAGAGAACAAATTTTCGGGGGGGGGTTGACACGCGTGCGACGATGATCTCCCGGAAACGCAGTTAAAAAAAAAAATAATGGTCCTTTTTTAATCTGTTAACCGGGCTTTTTATCAGGGGGAAGAAAAAACGAACGAGTTAAATAATAAAAAAAACTAGCTACTTGGACTTTTTGAAGCTCGTTCGACGATGAAATTTCTATTTTATGGTGTTTTCGTACGTGGTGGTTCGGAGAGGTGATAAAAGTGATAAGGGCGAGAGAAAGAAAGTATAGAAGAAAGAGAGAGTATATA]
[+] EMBL BI504638 [GAGGAAAACACACAGAGTCCGTAGCCGCGGAAGAATTCTTTTAGGAAAATCGAGCCCCGCGCTGTTTTCGAAACAGGAGAGAACGGATGATCGGTTTTCAGAGAACGGAAAAAGGGGGATTAGAGAACAAATTTTCGGGGAGGGGTTGACACGCGTGCGACGATGATCTCCCGGAAACGCAGTTAAAAAAAAAAATAATGGTCCTTTTTTAATCTGTTAACCGGGCTTTTTATCAGAGGGAAGAAAAAACGAACGAGTTAAATAATAAAAAAAACTAGCTACTTGGACTTTTTGAAGCTCGTTCGACGATGAAATTTCTATTTTATGGTGTTTTCGTACGTGGTGGTTCGGAGAGGTGATAAAAGTGATA ]
[+] EMBL BI511964 [ ATTCTTTTAGGAAAATCGAGCCCCGCGCTGTTTTCGAAACAGGAGAGAACGGATGATCGGTTTTCAGAGAACGGAAAAAGGGGGATTAGAGAACAAATTTTCAGGGGGGAGTTGACACGCGTGCGACGATGATCTCCCGGAAACGCAATT AAAAAAAAATAATAGTCCTTTTTTAATCTGTTAACCGGGCTTTTTATCAGGGGGAAGAAAAAACGAACGAGTTAAATAATAAAAAAAACTAGCTACTTGGACTTTTTGAAGCTCGTTCGACGATGAAATTTCTATTTTATGGTGTTTTCGTACGTGGTGGTTCGGAGAGGTGATAAAAGTGATAAGGGCGAGAGAAAGAAAGTATAGAAGAAAGAGAGAGTATATA]
consensusID : consensus_15#8 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 292 fasta sequence
[GGCGGCGCGGGAATTCGATTCGAGCGGCCGCCGGGCAGGTACTGCTGACACGTTGGCACCAGACACGATAGATGAAACCAAACTGTTGATTTGGGAAACGACATCCACGTTCGATTCGCCTTTGACACTGATTGATGTTTTGGCGGACACATCGCTGACCAACATGGCTACGCAGAAGGCAGCTAGGACGACGACAGCAACGATTTTGCTCATTTTGATTTTTGTGCTGTTTGGAATTGCTTTTAGAAAGCTCGGTTCGATACCTCGGCCGACCTCGGCCGCGACCACGCTA]
[+] EMBL AB078178 [GGCGGCGCGGGAATTCGATTCGAGCGGCCGCCGGGCAGGTACTGCTGACACGTTGGCACCAGACACGATAGATGAAACCAAACTGTTGATTTGGGAAACGACATCCACGTTCGATTCGCCTTTGACACTGATTGATGTTTTGGCGGACACATCGCTGACCAACATGGCTACGCAGAAGGCAGCTAGGACGACGACAGCAACGATTTTGCTCATTTTGATTTTTGTGCTGTTTGGAATTGCTTTTAGAAAGCTCGGTTCGATACCTCGGCCGACCTCGGCCGCGACCACGCTA]
consensusID : consensus_15#9 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 287 fasta sequence
[GGCGCAGGCGGCGCGGGAATCGATTAGCGTGGTCGCGGCGAGGTATCGAACCGAGCTTTCTAAAAGCAATTCCAAACAGCACAAAAATCAAAATGAGCAAAATCGTTGCTGTCGTCGTCCTAGCTGCCTTCTGCGTAGCCATGTTGGTCAGCGATGTGTCCGCCAAAACATCAATCAGTGTCAAAGGCGAATCGAACGTGGATGTCGTTTCCCAAATCAACAGTTTGGTTTCATCTATCGTGTCTGGTGCCAACGTGTCAGCAGTACCTGCCCGGGCGGCCGCTCGA]
[+] EMBL AB078184 [GGCGCAGGCGGCGCGGGAATCGATTAGCGTGGTCGCGGCGAGGTATCGAACCGAGCTTTCTAAAAGCAATTCCAAACAGCACAAAAATCAAAATGAGCAAAATCGTTGCTGTCGTCGTCCTAGCTGCCTTCTGCGTAGCCATGTTGGTCAGCGATGTGTCCGCCAAAACATCAATCAGTGTCAAAGGCGAATCGAACGTGGATGTCGTTTCCCAAATCAACAGTTTGGTTTCATCTATCGTGTCTGGTGCCAACGTGTCAGCAGTACCTGCCCGGGCGGCCGCTCGA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_15#4 ------------------------------------------------------------
consensus_15#8 ------------------------------------------------------------
consensus_15#6 ------------------------------------------------------------
consensus_15#5 ------------------------------------------------------------
consensus_15#7 ------------------------------------------------------------
consensus_15#1 CGCTTGGCCGTTTGCTTCACATGTGTATGTGTGTGTATATGTGTATATGTACATGTGTGC 60
consensus_15#2 -----------------------------------------------------GTAATTT 7
consensus_15#3 ------------------------------------------------------------
consensus_15#9 ------------------------------------------------------------
consensus_15#0 ------------------------------------------------------------
consensus_15#4 ------------------------------------------------------------
consensus_15#8 ------------------------------------------------------------
consensus_15#6 ------------------------------------------------------------
consensus_15#5 ------------------------------------------------------------
consensus_15#7 ------------------------------------------------------------
consensus_15#1 GTGCATGTACACACACACACATACATACATACATACAGAGGGAAGAGAAATATAGAAGCG 120
consensus_15#2 GCCCAAGTGCCTTCCCGTTGGTCGAGTCATGC-TGTAATTCGTATATATATATATATACC 66
consensus_15#3 ------------------------------------------TAATTGTACGGAGAGAGA 18
consensus_15#9 ------------------------------------------------------------
consensus_15#0 ---------------------------TTGGAGGATATGCGACAGATCGTTACCACAAAA 33
consensus_15#4 -------------------TTTTGAATTTTATTAATTACTTTATTCGAATGCGTTGTATG 41
consensus_15#8 ------------------------------------------------------------
consensus_15#6 -----------------TTTTTTGAATTTTATTAATTACTTTATTCGAATGCGTTGTATG 43
consensus_15#5 ------------------------------------------------------------
consensus_15#7 ------------------------------------------------------------
consensus_15#1 GGAGGAAGAAGGCACTGTTGAAGAAGTCACACGCGCACGCATATAACGTAATACTTGTTC 180
consensus_15#2 GTGTATTATTCGTCTCGTCCC-GATTTCAAACTCGT-CGAACTCTCCCCCTTCTCCCGTC 124
consensus_15#3 GCAGCTAGAATGAGGTGTTCCCGCGAGGTGGTCGCTCGCGTTCGGCCCGCGCGTTGATTC 78
consensus_15#9 ------------------------------------------------------------
consensus_15#0 GGAATATAATCAGTGCATCGCCGAAGCTGTAAGAGACGCGGTCGTTTCATTAGCCGGAGG 93
consensus_15#4 CGCGCAATACAAAGCTAAAGAATATATA-AATTAAGCGAAAACATTAGCGTCGATAAGAA 100
consensus_15#8 ---------------------------------------------------------GGC 3
consensus_15#6 CGCGCAATACAAAGCTAAAGAATATATA-AATTAAGCGAAAACATTAGCGTCGATAAGAA 102
consensus_15#5 --------ACGAGAGAGGAAAACACACA-GAGTCCGTAGCCGCGGAAGAATTCTTTTAGG 51
consensus_15#7 --------------GAGGAAAACACACA-GAGTCCGTAGCCGCGGAAGAATTCTTTTAGG 45
consensus_15#1 ACACGTACACGAGAGAGGAAAACACACA-GAGTCCGCAGCCGCGGAAGAATTCTTTTAGG 239
consensus_15#2 GGATCCACGTTATTATTTATATTATACACGCGTGCATGCGCGCATGGCGATAACGTGGGG 184
consensus_15#3 GAGCTCGCGCGATACGCCACGCCG-ATATCCGTGCTGATACAGTGCGGAAATCCACCGAA 137
consensus_15#9 ------------------------------------------------------------
consensus_15#0 TTTGAAGAGTTTCAAAATTCTGCCGATCGAGCCATTGGCCGTGGACAGCGTGAAAATTGG 153
consensus_15#4 TTTGCAGGATATTAACTAAAGTTTGAGCTAGG--AGTACTGCTGACACGTTGGCACCAGA 158
consensus_15#8 GGCGCGGGAATTCGATTCGAGCGGCCGCCGGGCAGGTACTGCTGACACGTTGGCACCAGA 63
consensus_15#6 TTTGCAGGATATTAACTAAAGTTTGAGCTAGG--AGTACTGCTGACACGTTGGCACCAGA 160
consensus_15#5 AAAATCGAGCCCCGCGCTGTTTTCGAAACAGGAGAGAACGGATGATCGGTTTTCAGAGAA 111
consensus_15#7 AAAATCGAGCCCCGCGCTGTTTTCGAAACAGGAGAGAACGGATGATCGGTTTTCAGAGAA 105
consensus_15#1 AAAATCGAGCCCCGCGCTGTTTTCGAAACAGGAGAGAACGGATGATCGGTTTTCAGAGAA 299
consensus_15#2 ATAATCGCGCATCGA---GTTTGTGCGTTTGAAAAGAAAAGAGGAAGAAACGGAGAAAAA 241
consensus_15#3 CGAACCGAACTCAGTGCCGAGGCTGACCGAAAAGAGAGTAACGGAGAGGAAGCGACGGAT 197
consensus_15#9 ---GGCGCAGGCGGCGCGGGAATCGATTAGCGTGGTCGCGGCGAGGTATCGAACCGAGCT 57
consensus_15#0 AGAATCGCAAGGATCGGTTACTTTGAGGCAAGAATATAAAAATATCAAGTTATACGGACT 213
*
consensus_15#4 CACGATAGA---TGAAACCAAACTGTTGATTT--GGGAAACGACATCCACGTTCGATTCG 213
consensus_15#8 CACGATAGA---TGAAACCAAACTGTTGATTT--GGGAAACGACATCCACGTTCGATTCG 118
consensus_15#6 CACGATAGA---TGAAACCAAACTGTTGATTT--GGGAAACGACATCCACGTTCGATTCG 215
consensus_15#5 CGGAAAAAG---GGGGATTAGAGAACAAATTTTCGGGGAGGGGTTGACACGCGTGCGACG 168
consensus_15#7 CGGAAAAAG---GGGGATTAGAGAACAAATTTTCGGGGGGGGGTTGACACGCGTGCGACG 162
consensus_15#1 CGGAAAAGG---AAGGAAAAAAAAGAAGA-----AAAAAAAAAAAAAAA-----GAAAAA 346
consensus_15#2 AAAAAAAAA---AAAAAATGAAAAAATTATTA--GCAATGCGAAAAATTCTTCAAAGTTG 296
consensus_15#3 ATCTATATA---GGGAGAGGGAGATCGAGAGCGCGAGGACAGGAAGGAAGAGAGAAAGGG 254
consensus_15#9 TTCTAAAAG---CAATTCCAAACAGCACAAAAATCAAAATGAGCAAAATCGTTGCTGTCG 114
consensus_15#0 TACGAAAAACCTTGAGATCAAAAATTACAAC---ATAGACTGGGATAAATGT--ATACTG 268
* * *
consensus_15#4 CCTTTGACACTGATTGATGTTTTGGCGGACACA---------TCGCTGACCAACATGGCT 264
consensus_15#8 CCTTTGACACTGATTGATGTTTTGGCGGACACA---------TCGCTGACCAACATGGCT 169
consensus_15#6 CCTTTGACACTGATTGATGTTTTGGCGGACACA---------TCGCTGACCAACATGGCT 266
consensus_15#5 ATGATCTCCCGGAAACGCAGTTAAAAAAAAAAAATAAT--GGTCCTTTTTTAATCTGTTA 226
consensus_15#7 ATGATCTCCCGGAAACGCAGTTAAAAAAAAAAA-TAAT--GGTCCTTTTTTAATCTGTTA 219
consensus_15#1 AAAAAGAAGAAGAAGAGGAAGTAAACTTTTAAA---------CCGATTTTGTCTCTAGTA 397
consensus_15#2 ATAATGAAATAATGGAAAATTTTCCTATCTATAACTTA--TCTGTAACATCAACTTTTCA 354
consensus_15#3 AAAGAGAAACGGTGTCGCATCGCAAGTTGTTTC-------GGTATACGGTGCACGAGACG 307
consensus_15#9 TCGTCCTAGCTGCCTTCTGCGTAGCCATGTTGG---------TCAGCGATGTGTCCGCCA 165
consensus_15#0 TCATCGGAATCGTACAATCCTCAAGTAGATTTTGTCGCCGATTACAAAATCGAAGGAAAA 328
consensus_15#4 ACGCAGAAGGCAGCTAGGACGACGATAGCA---ACGATTTTGCTCATTTTGATTTTTGTG 321
consensus_15#8 ACGCAGAAGGCAGCTAGGACGACGACAGCA---ACGATTTTGCTCATTTTGATTTTTGTG 226
consensus_15#6 ACGCAGAAGGCAGCTAGGACGACGACAGCA---ACGATTTTGCTCATTTTGATTTTTGTG 323
consensus_15#5 ACCGGGCTTTTTATCAGAGGGAAGAAAAAACGAACGAGTTAAATAATAAAAAAAACTA-G 285
consensus_15#7 ACCGGGCTTTTTATCAGGGGGAAGAAAAAACGAACGAGTTAAATAATAAAAAAAACTA-G 278
consensus_15#1 GTGGCGCGAAAAAATAGACAGAGAAGAAAA--ATCGTGGATACCGAAAAGGATGGTGGTG 455
consensus_15#2 AAACTTTTGGTCGATACA-ACACACGTACATATACACATACACACATACATACATACATA 413
consensus_15#3 GAGAAAC-GGTCGCGAGAAGATCACGAGAGAGGATTGGGTGAAAATTGGAGAAAATCGAG 366
consensus_15#9 AAACATCAATCAGTGTCAAAGGCGAATCGA---ACGTGGATGTCGTTTCCCAAATCAA-- 220
consensus_15#0 GTGTTGCTTTTACCTGTCAGAGGAGCGGGAAAATCAAACATAACTATGTATGATTTGAAA 388
consensus_15#4 CTGTTTGGAA--TTGCTTTTAGAAAGCTCGGTT--CGATCTCGTGCCGCTCGTGCCGAA- 376
consensus_15#8 CTGTTTGGAA--TTGCTTTTAGAAAGCTCGGTT--CGATACCTCG--------GCCGAC- 273
consensus_15#6 CTGTTTGGAA--TTGCTTTTAGAAAGCTCGGTT--CGATCTGAATCTCTATTTTATGGT- 378
consensus_15#5 CTACTTGGA------CTTTTTGAA-GCTCGTTCGACGATGAAATT-TCTATTTTATGGT- 336
consensus_15#7 CTACTTGGA------CTTTTTGAA-GCTCGTTCGACGATGAAATT-TCTATTTTATGGT- 329
consensus_15#1 TGCCCTGCGT--GCTNNATACGACGGCCAACTCGGC-ACGTAATT---TGCCCAAGTGC- 508
consensus_15#2 CAGAGGGAA---GAGAAATATAGAAGCGGGAGTAAGAAGGCACTG-------TTGAAGN- 462
consensus_15#3 CAAGAAGAAAAGAAGCAAAGAGAGAAGAAAGACGGGAAAGAGACGTGTGAATANNAGAG- 425
consensus_15#9 CAGTTTGGTT-----TCATCTATCGTGTCTGGTGCCAACGTGTCA---------GCAGT- 265
consensus_15#0 TCACACAACGACATATACTGCGAAAAATACGAAAAGAACGGAGAAACTTACTTGAGAATC 448
*
consensus_15#4 -TTCGGCACGAGAAGAGTTTCAAAATTCTGCCGATCGAGCCATTGGCCGTGGACA-GCGT 434
consensus_15#8 -CTCGGC-CGCGACCACGCTA--------------------------------------- 292
consensus_15#6 -GTTTTCGTACGTGGTGGTTCGGAGAGGTGATAAAAGTGATAAGGGCGAGAGAAA-G--- 433
consensus_15#5 -GTTTTCGTACGTGGTGGTTCGGAGCGGGCCAAGATAGAGGGAGAGGGAGAGATACGCGT 395
consensus_15#7 -GTTTTCGTACGTGGTGGTTCGGAGAGGTGATAAAAGTGATAAGGGCGAGAGAAA---GA 385
consensus_15#1 -CTTCCCGTTGGTCGAGTCATGCTGTAATTCGTA-------------------------- 541
consensus_15#2 -AGTCACACGCGCACGCATATAACGTAATACTTGTTCACACGTACACGAGAGAGAGAACA 521
consensus_15#3 -AAATTCGAGAGAAAAACGGGACGAGAAAGAAAAAGAGAGGGAGAGAGAGAGAGAGAGAA 484
consensus_15#9 -ACCTGCCCGGGCGGCCGCTCGA------------------------------------- 287
consensus_15#0 AAGAAGCATGCGGTGAAATTCAATCCTGCTAAAGTGAAGTTGCGATTTGAAAACCTGTTC 508
* *
consensus_15#4 GAAAATTGGAGAATCGCAAGGATCGGTTACTTTGAGGCAAGAATATAAAAATATCAAGTT 494
consensus_15#8 ------------------------------------------------------------
consensus_15#6 AAAGNNNAGAAGAAAGAGAGAGTATATATTTTTAGTTTTTTAAGAAGGATAGTGAAAGT- 492
consensus_15#5 ACACGTAGAAAGAGAAAGAGAGGAAAAGAAAGATAGAGGGAGAGGGAGATCGAGAGCGCG 455
consensus_15#7 AAGTATAGAA-GAAAGAGAGAGTATATA-------------------------------- 412
consensus_15#1 ------------------------------------------------------------
consensus_15#2 AATTTTC----------------------------------------------------- 528
consensus_15#3 AGAGAGAGAAGAAACGGCGAG--------------------------------------- 505
consensus_15#9 ------------------------------------------------------------
consensus_15#0 GATGGCAATAAGGAACTGGGAGAACAAATGAATCGGTTTATAAATGAAAATTCCGAGTTA 568
consensus_15#4 ATACGGACTTA------------------------------------------------- 505
consensus_15#8 ------------------------------------------------------------
consensus_15#6 ------------------------------------------------------------
consensus_15#5 AGGACAGGAAGGAAGAGAGAAAGGGAAAGAGAAACGGTGTCGCATCGCA----------- 504
consensus_15#7 ------------------------------------------------------------
consensus_15#1 ------------------------------------------------------------
consensus_15#2 ------------------------------------------------------------
consensus_15#3 ------------------------------------------------------------
consensus_15#9 ------------------------------------------------------------
consensus_15#0 CTTTTCAAAGAGCTGCAAGCCGCTTACGAAGAAACCTTCAGTCTAGTTTTTACGAAAATC 628
consensus_15#4 --
consensus_15#8 --
consensus_15#6 --
consensus_15#5 --
consensus_15#7 --
consensus_15#1 --
consensus_15#2 --
consensus_15#3 --
consensus_15#9 --
consensus_15#0 GA 630
|
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| Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |