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Apis mellifera
cluster # 150 cluster # 150       Sequences # 6       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_150#0 length = 767 sequences # 5  
consensus_150#1 length = 539 sequences # 1  

consensusID : consensus_150#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 767
fasta sequence
                              [TCTTGCGTATTTATCAAAAATAGAAAGAACGTGACAGAATGTCTGTCACTAATCTTAATTCTCAGCAAGAATACGAGAATTATGTTAAGTCACAAGATCTTTCTGTTATTCATTTCTACGCGCCATGGGCTGATCAATGTTCGCAGATAAATGATGTGATCGAAGAAATGAGCAAACTAACCGAGTATAAAGAAGTTAAATTTGCTAAAATCGAAGCTGAAAAAATTCCTGATGTATCTTTAAAAGCTGGTATCAGTGCAGTACCAACAATTATTTTCACAAGAAACGATACTATACTCGATAGAGTCGATGGAGCCAACCCTTCTGCTATAGCAGACAAAATCAAACATCAGTTGTCCAAAAAAGATTCCATTTCAATTGAAACATATAAACCAAAAGAAAATCTTGAAGAAAGATTAAAAAAGTTAATAAATCAAGCACCTTGTATGCTATTCATGAAAGGATCTCCAATAAATCCACGTTGTGGATTTTCTAGAACAATAGTTTCCATTTTAGATTCTTATAAAGCAGACTATCAATCATTTGATATTTTACAAGATAATGATGTTAGAGAAGGACTTAAAAAATTTAGTGATTGGCCTACATATCCTCAGTTGTATATAAATGGAGAACTTATTGGAGGATTAGATATTATAAAGGAAATGAGTGAATCTGGAGAGTTAGAAAATATGTTGCCTAAGAAGAGTTAATAAGAGTTAAAGAAAATAAAGCAAAATCAGTCACTATTTTAATATAATTATTTTTAA]

[+] EMBL BI510339             [TCTTGCGTATTTATCAAAAATAGAAAGAACGTGACAGAATGTCTGTCACTAATCTTAATTCTCAGCAAGAATACGAGAATTATGTTAAGTCACAAGATCTTTCTGTTATTCATTTCTACGCGCCATGGGCTGATCAATGTTCGCAGATAAATGATGTGATCGAAGAAATGAGCAAACTAACCGAGTATAAAGAAGTTAAATTTGCTAAAATCGAAGCTGAAAAAATTCCTGATGTATCTTTAAAAGCTGGTATCAGTGCAGTACCAACAATTATTTTCACAAGAAACGATACTATACTCGATAGAGTCGATGGAGCCAACCCTTCTGCTATAGCAGACAAAATCAAACATCAGTTGTCCAAAAAAGATTCCATTTCAATTGAAACATATAAACCAAAAGAAAATCTTGAAGAAAGATTAAAAAAGTTAATAAATCAAGCACCTTGTATGCTATTCATGAAAGGATCTCCAATAAATCCACGTTGTGGATTTTCTAGAACAATAGTTTCCATTTTAGATTCTTATAAAGCAGACTATCAATCATTTGATATTTTACAAGATAATGATGTTAGAGAAGGACTT                                                                                                                                                                                          ]
[+] EMBL BI510155             [                                                                                                                                GCTGATCAATGTTCGCAGATAAATGATGTGATCGAAGAAATGAGCAAACTAACCGAGTATAAAGAAGTTAAATTTGCTAAAATCGAAGCTGAAAAAATTCCTGATGTATCTTTAAAAGCTGGTATCAGTGCAGTACCAACAATTATTTTCACAAGAAACGATACTATACTCGATAGAGTCGATGGAGCCAACCCTTCTGCTATAGCAGACAAAATCAAACATCAGTTGTCCAAAAAAGATTCCATTTCAATTGAAACATATAAACCAAAAGAAAATCTTGAAGAAAGATTAAAAAAGTTAATAAATCAAGCACCTTGTATGCTATTCATGAAAGGATCTCCAATAAATCCACGTTGTGGATTTTCTAGAACAATAGTTTCCATTTTAGATTCTTATAAAGCAGACTATCAATCATTTGATATTTTACAAGATAATGATGTTAGAGAAGGACTTAAAAAATTTAGTGATTGGCCTACATATCCTCAGTTGTATATAAATGGAGAACTTATTGGAGGATTAGATATTATAAAGGAAATGAGTGAATCTGGAGAGTTAGAAAATATGTTGCCTAAGAAGAGTTAATAAGAGTTAAAGAAAATAAAGCAAAATCAGTCACTATTTTAATATAATTATTTTTAA]
[+] EMBL BI509473             [                                                                                                                                     TCAATGTTCGCAGATAAATGATGTGATCGAAGAAATGAGCAAACTAACCGAGTATAAAGAAGTTAAATTTGCTAAAATCGAAGCTGAAAAAATTCCTGATGTATCTTTAAAAGCTGGTATCAGTGCAGTACCAACAATTATTTTCACAAGAAACGATACTATACTCGATAGAGTCGATGGAGCCAACCCTTCTGCTATAGCAGACAAAATCAAACATCAGTTGTCCAAAAAAGATTCCATTTCAATTGAAACATATAAACCAAAAGAAAATCTTGAAGAAAGATTAAAAAAGTTAATAAATCAAGCACCTTGTATGCTATTCATGAAAGGATCTCCAATAAATCCACGTTGTGGATTTTCTAGAACAATAGTTTCCATTTTAGATTCTTATAAAGCAGACTATCAATCATTTGATATTTTACAAGATAATGATGTTAGAGAAGGACTTAAAAAATTTAGTGATTGGCCTACATATCCTCAGTTGTATATAAATGGAGAACTTATTGGAGGATTAGATATTATAAAGGAAATGAGTGAATCTGGAGAGTTAGAAAATATGTTGCCTAAGAAGAGTTAATAAGAGTTAAAGAAAATAAAGCAAAATCAGTCACTATTTTAATATAATTATTTTTAA]
[+] EMBL BI503013             [                                                                                                                                     TCAATGTTCGCAGATAAATGATGTGATCGAAGAAATGAGCAAACTAACCGAGTATAAAGAAGTTAAATTTGCTAAAATCGAAGCTGAAAAAATTCCTGATGTATCTTTAAAAGCTGGTATCAGTGCAGTACCAACAATTATTTTCACAAGAAACGATACTATACTCGATAGAGTCGATGGAGCCAACCCTTCTGCTATAGCAGACAAAATCAAACATCAGTTGTCCAAAAAAGATTCCATTTCAATTGAAACATATAAACCAAAAGAAAATCTTGAAGAAAGATTAAAAAAGTTAATAAATCAAGCACCTTGTATGCTATTCATGAAAGGATCTCCAATAAATCCACGTTGTGGATTTTCTAGAACAATAGTTTCCATTTTAGATTCTTATAAAGCAGACTATCAATCATTTGATATTTTACAAGATAATGATGTTAGAGAAGGACTTAAAAAATTTAGTGATTGGCCTACATATCCTCAGTTGTATATAAATGGAGAACTTATTGGAGGATTAGATATTATAAAGGAAATGAGTGAATCTGGAGAGTTAGAAAATATGTTGCCTAAGAAGA                                                              ]
[+] EMBL BI510220             [                                                                                                                                     TCAATGTTCGCAGATAAATGATGTGATCGAAGAAATGAGCAAACTAACCGAGTATAAAGAAGTTAAATTTGCTAAAATCGAAGCTGAAAAAATTCCTGATGTATCTTTAAAAGCTGGTATCAGTGCAGTACCAACAATTATTTTCACAAGAAACGATACTATACTCGATAGAGTCGATGGAGCCAACCCTTCTGCTATAGCAGACAAAATCAAACATCAGTTGTCCAAAAAAGATTCCATTTCAATTGAAACATATAAACCAAAAGAAAATCTTGAAGAAAGATTAAAAAAGTTAATAAATCAAGCACCTTGTATGCTATTCATGAAAGGATCTCCAATAAATCCACGTTGTGGATTTTCTAGAACAATAGTTTCCATTTTAGATTCTTATAAAGCAGACTATCAATCATTTGATATTTTACAAGATAATGATGTTAGAGAAGGACTTAAAAAATTTAGTGATTGGCCTACATATCCTCAGTTGTATATAAATGGAGAACTTATTGGAGGATTAGATATTATAAAGGAAATGAGTGAATCTGGAG                                                                                         ]


>consensus_150#0 TCTTGCGTATTTATCAAAAATAGAAAGAACGTGACAGAATGTCTGTCACTAATCTTAATT CTCAGCAAGAATACGAGAATTATGTTAAGTCACAAGATCTTTCTGTTATTCATTTCTACG CGCCATGGGCTGATCAATGTTCGCAGATAAATGATGTGATCGAAGAAATGAGCAAACTAA CCGAGTATAAAGAAGTTAAATTTGCTAAAATCGAAGCTGAAAAAATTCCTGATGTATCTT TAAAAGCTGGTATCAGTGCAGTACCAACAATTATTTTCACAAGAAACGATACTATACTCG ATAGAGTCGATGGAGCCAACCCTTCTGCTATAGCAGACAAAATCAAACATCAGTTGTCCA AAAAAGATTCCATTTCAATTGAAACATATAAACCAAAAGAAAATCTTGAAGAAAGATTAA AAAAGTTAATAAATCAAGCACCTTGTATGCTATTCATGAAAGGATCTCCAATAAATCCAC GTTGTGGATTTTCTAGAACAATAGTTTCCATTTTAGATTCTTATAAAGCAGACTATCAAT CATTTGATATTTTACAAGATAATGATGTTAGAGAAGGACTTAAAAAATTTAGTGATTGGC CTACATATCCTCAGTTGTATATAAATGGAGAACTTATTGGAGGATTAGATATTATAAAGG AAATGAGTGAATCTGGAGAGTTAGAAAATATGTTGCCTAAGAAGAGTTAATAAGAGTTAA AGAAAATAAAGCAAAATCAGTCACTATTTTAATATAATTATTTTTAA



consensusID : consensus_150#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 539
fasta sequence
                              [TCAATGTTCGCAGATAAATGATGTGATCGAAGAAATGAGCAAACTAACCGAGTATAAAGAAGTTAAATTTGCTAAAATCGAAGCTGAAAAAATTCCTGATGTATCTTTAAAAGCTGGTATCAGTGCAGTACCAACAATTATTTTCACAAGAAACGATACTATACTCGATAGAGTCGATGGAGCCAACCCTTCTGCTATAGCAGACAAAATCAAACATCAGTTGTCCAAAAAAGATTCCATTTCAATTGAAACATATAAACCAAAAGAAAATCTTGAAGAAAGATTAAAAAAGTTAATAAATCAAGCACCTTGTATGCTATTCATGAAAGGATCTCCAATAAATCCACGTTGTGGATTTTCTAGAACAATAGTTTCCATTTTAGATTCTTATAAAGCAGACTATCAATCATTTGATATTTTACAAGATAATGATGTTAGAGAAGGACTTAAAAAATTTAGTGATTGGCCTACATATCCTCAGTTGTATAAAAATGTATAATATATAGATTGCGAATTTTTGGAAATGAATGTACAATAAT]

[+] EMBL BI510190             [TCAATGTTCGCAGATAAATGATGTGATCGAAGAAATGAGCAAACTAACCGAGTATAAAGAAGTTAAATTTGCTAAAATCGAAGCTGAAAAAATTCCTGATGTATCTTTAAAAGCTGGTATCAGTGCAGTACCAACAATTATTTTCACAAGAAACGATACTATACTCGATAGAGTCGATGGAGCCAACCCTTCTGCTATAGCAGACAAAATCAAACATCAGTTGTCCAAAAAAGATTCCATTTCAATTGAAACATATAAACCAAAAGAAAATCTTGAAGAAAGATTAAAAAAGTTAATAAATCAAGCACCTTGTATGCTATTCATGAAAGGATCTCCAATAAATCCACGTTGTGGATTTTCTAGAACAATAGTTTCCATTTTAGATTCTTATAAAGCAGACTATCAATCATTTGATATTTTACAAGATAATGATGTTAGAGAAGGACTTAAAAAATTTAGTGATTGGCCTACATATCCTCAGTTGTATAAAAATGTATAATATATAGATTGCGAATTTTTGGAAATGAATGTACAATAAT]


>consensus_150#1 TCAATGTTCGCAGATAAATGATGTGATCGAAGAAATGAGCAAACTAACCGAGTATAAAGA AGTTAAATTTGCTAAAATCGAAGCTGAAAAAATTCCTGATGTATCTTTAAAAGCTGGTAT CAGTGCAGTACCAACAATTATTTTCACAAGAAACGATACTATACTCGATAGAGTCGATGG AGCCAACCCTTCTGCTATAGCAGACAAAATCAAACATCAGTTGTCCAAAAAAGATTCCAT TTCAATTGAAACATATAAACCAAAAGAAAATCTTGAAGAAAGATTAAAAAAGTTAATAAA TCAAGCACCTTGTATGCTATTCATGAAAGGATCTCCAATAAATCCACGTTGTGGATTTTC TAGAACAATAGTTTCCATTTTAGATTCTTATAAAGCAGACTATCAATCATTTGATATTTT ACAAGATAATGATGTTAGAGAAGGACTTAAAAAATTTAGTGATTGGCCTACATATCCTCA GTTGTATAAAAATGTATAATATATAGATTGCGAATTTTTGGAAATGAATGTACAATAAT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_150#0      TCTTGCGTATTTATCAAAAATAGAAAGAACGTGACAGAATGTCTGTCACTAATCTTAATT 60
consensus_150#1      ------------------------------------------------------------
                                                                                 

consensus_150#0      CTCAGCAAGAATACGAGAATTATGTTAAGTCACAAGATCTTTCTGTTATTCATTTCTACG 120
consensus_150#1      ------------------------------------------------------------
                                                                                 

consensus_150#0      CGCCATGGGCTGATCAATGTTCGCAGATAAATGATGTGATCGAAGAAATGAGCAAACTAA 180
consensus_150#1      -------------TCAATGTTCGCAGATAAATGATGTGATCGAAGAAATGAGCAAACTAA 47
                                  ***********************************************

consensus_150#0      CCGAGTATAAAGAAGTTAAATTTGCTAAAATCGAAGCTGAAAAAATTCCTGATGTATCTT 240
consensus_150#1      CCGAGTATAAAGAAGTTAAATTTGCTAAAATCGAAGCTGAAAAAATTCCTGATGTATCTT 107
                     ************************************************************

consensus_150#0      TAAAAGCTGGTATCAGTGCAGTACCAACAATTATTTTCACAAGAAACGATACTATACTCG 300
consensus_150#1      TAAAAGCTGGTATCAGTGCAGTACCAACAATTATTTTCACAAGAAACGATACTATACTCG 167
                     ************************************************************

consensus_150#0      ATAGAGTCGATGGAGCCAACCCTTCTGCTATAGCAGACAAAATCAAACATCAGTTGTCCA 360
consensus_150#1      ATAGAGTCGATGGAGCCAACCCTTCTGCTATAGCAGACAAAATCAAACATCAGTTGTCCA 227
                     ************************************************************

consensus_150#0      AAAAAGATTCCATTTCAATTGAAACATATAAACCAAAAGAAAATCTTGAAGAAAGATTAA 420
consensus_150#1      AAAAAGATTCCATTTCAATTGAAACATATAAACCAAAAGAAAATCTTGAAGAAAGATTAA 287
                     ************************************************************

consensus_150#0      AAAAGTTAATAAATCAAGCACCTTGTATGCTATTCATGAAAGGATCTCCAATAAATCCAC 480
consensus_150#1      AAAAGTTAATAAATCAAGCACCTTGTATGCTATTCATGAAAGGATCTCCAATAAATCCAC 347
                     ************************************************************

consensus_150#0      GTTGTGGATTTTCTAGAACAATAGTTTCCATTTTAGATTCTTATAAAGCAGACTATCAAT 540
consensus_150#1      GTTGTGGATTTTCTAGAACAATAGTTTCCATTTTAGATTCTTATAAAGCAGACTATCAAT 407
                     ************************************************************

consensus_150#0      CATTTGATATTTTACAAGATAATGATGTTAGAGAAGGACTTAAAAAATTTAGTGATTGGC 600
consensus_150#1      CATTTGATATTTTACAAGATAATGATGTTAGAGAAGGACTTAAAAAATTTAGTGATTGGC 467
                     ************************************************************

consensus_150#0      CTACATATCCTCAGTTGTATATAAATGGAGAACTTATTGGAGGATTAGATATTATAAAGG 660
consensus_150#1      CTACATATCCTCAGTTGTATAAAAATGTATAATATAT----AGATTGCGAATTTTT--GG 521
                     ********************* ***** * **  ***     ****    *** *   **

consensus_150#0      AAATGAGTGAATCTGGAGAGTTAGAAAATATGTTGCCTAAGAAGAGTTAATAAGAGTTAA 720
consensus_150#1      AAATGAATGTACAATAAT------------------------------------------ 539
                     ****** ** *     *                                           

consensus_150#0      AGAAAATAAAGCAAAATCAGTCACTATTTTAATATAATTATTTTTAA 767
consensus_150#1      -----------------------------------------------
                                                                    




Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner    (hubert.wassner@noos.fr)