These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1539#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 533 fasta sequence [TTTAATCATTTAAATACATTAAAAAACATAAAAAAAGAATTATTTTTATAGGCTAACTTACATATCGAGTACAAAACAAAATATATGTAATAAAAAAATAGTATATATAGACATATATAACAGTAGTAAAAACAGATAATATATATATATAAACATAATTTCAATTAGAAAGCAGAATTCGCAAAAGAAATTATTTAAAATAATCATATAATATTTTATATTATGGAGACAACCAACCAGCTAGTAAACTACCTAATAATAATTGTGCAACTGGTAATATTGACAATGGTAAATTTACAGCTGAACCATGAGCTGAACCATGATAAGCACCACGTAAAATCCAGCTACCAAGACCAACTGATTTGTGAGTACTTGTAAAAAGTGTAGCTAGTAAGATATTTCGAGGTAACCATCGAGAGCACAAAATCCAACATAAGCAGCTAACAAATAGTTGTCCCGCACAAGCAATTAATACACATAATAATACATCAGAAGCTTGCAAAGATGATGCATCTATTAACAATGCATCACAA] [+] EMBL BI515147 [TTTAATCATTTAAATACATTAAAAAACATAAAAAAAGAATTATTTTTATAGGCTAACTTACATATCGAGTACAAAACAAAATATATGTAATAAAAAAATAGTATATATAGACATATATAACAGTAGTAAAAACAGATAATATATATATATAAACATAATTTCAATTAGAAAGCAGAATTCGCAAAAGAAATTATTTAAAATAATCATATAATATTTTATATTATGGAGACAACCAACCAGCTAGTAAACTACCTAATAATAATTGTGCAACTGGTAATATTGACAATGGTAAATTTACAGCTGAACCATGAGCTGAACCATGATAAGCACCACGTAAAATCCAGCTACCAAGACCAACTGATTTGTGAGTACTTGTAAAAAGTGTAGCTAGTAAGATATTTCGAGGTAACCATCGAGAGCACAAAATCCAACATAAGCAGCTAACAAATAGTTGTCCCGCACAAGCAATTAATACACATAATAATACATCAGAAGCTTGCAAAGATGATGCATCTATTAACAATGCATCACAA] consensusID : consensus_1539#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 417 fasta sequence [ATATAGCGTATAACGCTTCGAAGTAGTGTAATTGGTTTTTCTTTTTTACTTTCACTTAATGTACTATTTAAAATTGTTCCTGTAATGATGTACAGTGTATTGTATAATTGTCATGATTTTCTTTTATCAAATATCAATGAAACTAAGTTGATTAGAATTGAAAAAACTTATTCGTGCATAATTTTACACTAGTTGTTTCAATATATACTAATAATAATTGTGCAACTGGTAATATTGACAATGGTAAATTTACAGCTGAACCATGAGCTGAACCATGATAAGCACCACGTAAAATCCAGCTACCAAGACCAACTGATTTGTGAGTACTTGTAAAAAGTGTAGCTAGTAAGATATTTCGAGGTAACCATCGAGAGCACAAAATCCAACATAAGCAGCTAACAAATAGTTGTCCCGCAC] [-] EMBL BI515330 [ATATAGCGTATAACGCTTCGAAGTAGTGTAATTGGTTTTTCTTTTTTACTTTCACTTAATGTACTATTTAAAATTGTTCCTGTAATGATGTACAGTGTATTGTATAATTGTCATGATTTTCTTTTATCAAATATCAATGAAACTAAGTTGATTAGAATTGAAAAAACTTATTCGTGCATAATTTTACACTAGTTGTTTCAATATATACTAATAATAATTGTGCAACTGGTAATATTGACAATGGTAAATTTACAGCTGAACCATGAGCTGAACCATGATAAGCACCACGTAAAATCCAGCTACCAAGACCAACTGATTTGTGAGTACTTGTAAAAAGTGTAGCTAGTAAGATATTTCGAGGTAACCATCGAGAGCACAAAATCCAACATAAGCAGCTAACAAATAGTTGTCCCGCAC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1539#0 TTTAATCATTTAAATACATTAAAAAACATAAAAAAAG---AATTATTTTTATAGGCTAAC 57 consensus_1539#1 -----------ATATAGCGTATAACGCTTCGAAGTAGTGTAATTGGTTTTTCTTTTTTAC 49 * *** ** ** * * ** ** **** **** * ** consensus_1539#0 TTACATATCGAGTACAAAACAAAATATATGTAATAAAAAAATAGTATATATAGACATATA 117 consensus_1539#1 TTTCACTTAATGTACTATTTAAAATTGTTCCTGTAATGATGTACAGTGTAT-----TGTA 104 ** ** * **** * ***** * *** * ** * *** * ** consensus_1539#0 TAACAGTAGTAAAAACAGATAATATATATATATAAACATAATTTCAATTAGAAAGCAGAA 177 consensus_1539#1 TAATTGTCATGATTTTCTTTTAT---CAAATATCAATGAAACT--AAGTTGAT--TAGAA 157 *** ** * * * ** * **** ** ** * ** * ** **** consensus_1539#0 TTCGCAAAAGAAATTATTTAAAATAATCATATAATATTTTATATTATGGAGACAACCAAC 237 consensus_1539#1 TT---GAAAAAACTTATT---------CGTGCATAATTTTACACTA----GTTGTTTCAA 201 ** *** ** ***** * * * ****** * ** * * consensus_1539#0 CAGCTAGTAAACTACCTAATAATAATTGTGCAACTGGTAATATTGACAATGGTAAATTTA 297 consensus_1539#1 TATATA---------CTAATAATAATTGTGCAACTGGTAATATTGACAATGGTAAATTTA 252 * ** ********************************************* consensus_1539#0 CAGCTGAACCATGAGCTGAACCATGATAAGCACCACGTAAAATCCAGCTACCAAGACCAA 357 consensus_1539#1 CAGCTGAACCATGAGCTGAACCATGATAAGCACCACGTAAAATCCAGCTACCAAGACCAA 312 ************************************************************ consensus_1539#0 CTGATTTGTGAGTACTTGTAAAAAGTGTAGCTAGTAAGATATTTCGAGGTAACCATCGAG 417 consensus_1539#1 CTGATTTGTGAGTACTTGTAAAAAGTGTAGCTAGTAAGATATTTCGAGGTAACCATCGAG 372 ************************************************************ consensus_1539#0 AGCACAAAATCCAACATAAGCAGCTAACAAATAGTTGTCCCGCACAAGCAATTAATACAC 477 consensus_1539#1 AGCACAAAATCCAACATAAGCAGCTAACAAATAGTTGTCCCGCAC--------------- 417 ********************************************* consensus_1539#0 ATAATAATACATCAGAAGCTTGCAAAGATGATGCATCTATTAACAATGCATCACAA 533 consensus_1539#1 -------------------------------------------------------- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |