These datas are free for academic use only, please contact me for any other use. Apis mellifera see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_1596#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 526 fasta sequence [TTTCTCTACTCGTCATGTTTTTCTTTTTTGACAGCATGCAAATGCTTGTAGCAATCTGTACAGCTATTGTAGCTGCAGTTGCACTGGCATTTCTTCTTTTACCCATGTGTCAATATATTATTAGACCATGTTCAGATGGTAATAAAATATCCTTTGGTGTATGTGGAAGGTTTACTGGTGCAGAATTACTTTCATTTTCATTAAGTGTGAGTATAGTATGCATTTGGGTACTGACTGGACATTGGCTTCTTATGGACGCAATGGGTATGGGACTATGTGTAGCATTCATTGCATTCATTCGATTACCTAGTCTAAAGGTAGCAACTAGACCAGCAGATAATCCAGTGAATCTTGTGGCTAGAAGGTTGCACTTNNNTGGTGTAGCGAGAGAAGCACCAAAACTTCCATTACCTGGAAAATTAGTATTTCCATCGATGCATCAAGCAGGACATTTTTCAATGTTAGGTCTTGGCGATGTTGTTATGCCANNACTATTGCTTTGCTTCGTTTTACGATATGACGCGTA] [+] EMBL BI512814 [TTTCTCTACTCGTCATGTTTTTCTTTTTTGACAGCATGCAAATGCTTGTAGCAATCTGTACAGCTATTGTAGCTGCAGTTGCACTGGCATTTCTTCTTTTACCCATGTGTCAATATATTATTAGACCATGTTCAGATGGTAATAAAATATCCTTTGGTGTATGTGGAAGGTTTACTGGTGCAGAATTACTTTCATTTTCATTAAGTGTGAGTATAGTATGCATTTGGGTACTGACTGGACATTGGCTTCTTATGGACGCAATGGGTATGGGACTATGTGTAGCATTCATTGCATTCATTCGATTACCTAGTCTAAAGGTAGCAACTAGACCAGCAGATAATCCAGTGAATCTTGTGGCTAGAAGGTTGCACTTNNNTGGTGTAGCGAGAGAAGCACCAAAACTTCCATTACCTGGAAAATTAGTATTTCCATCGATGCATCAAGCAGGACATTTTTCAATGTTAGGTCTTGGCGATGTTGTTATGCCANNACTATTGCTTTGCTTCGTTTTACGATATGACGCGTA] consensusID : consensus_1596#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 399 fasta sequence [CAAATGCTTGTAGCAATCTGTACAGCTATTGTAGCTGCAGTTGCACTGGCATTTCTTCTTTTACCCATGTGTCAATATATTATTAGACCATGTTCAGATGGTAATAAAATATCCTTTGGTGTATGTGGAAGGTTTACTGGTGCAGAATTACTTTCATTTTCATTAAGTGTGAGTATAGTATGCATTTGGGTACTGACTGGACATTGGCTTCTTATGGACGCAATGGGTATGGGACTATGTGTAGCATTCATTGCATTCATTCGATTACCTAGTCTAAAGGTATCCACCATATTATTAACTGGATTACTCATTTATGATGTCTTCTGGGTTTTCTTTTCATCCTATATATTCAGCACAAATGTAATGGTTAAGGTAGCAACTAGACCAGCAGATAATCCA] [+] EMBL BI511182 [CAAATGCTTGTAGCAATCTGTACAGCTATTGTAGCTGCAGTTGCACTGGCATTTCTTCTTTTACCCATGTGTCAATATATTATTAGACCATGTTCAGATGGTAATAAAATATCCTTTGGTGTATGTGGAAGGTTTACTGGTGCAGAATTACTTTCATTTTCATTAAGTGTGAGTATAGTATGCATTTGGGTACTGACTGGACATTGGCTTCTTATGGACGCAATGGGTATGGGACTATGTGTAGCATTCATTGCATTCATTCGATTACCTAGTCTAAAGGTATCCACCATATTATTAACTGGATTACTCATTTATGATGTCTTCTGGGTTTTCTTTTCATCCTATATATTCAGCACAAATGTAATGGTTAAGGTAGCAACTAGACCAGCAGATAATCCA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_1596#0 TTTCTCTACTCGTCATGTTTTTCTTTTTTGACAGCATGCAAATGCTTGTAGCAATCTGTA 60 consensus_1596#1 --------------------------------------CAAATGCTTGTAGCAATCTGTA 22 ********************** consensus_1596#0 CAGCTATTGTAGCTGCAGTTGCACTGGCATTTCTTCTTTTACCCATGTGTCAATATATTA 120 consensus_1596#1 CAGCTATTGTAGCTGCAGTTGCACTGGCATTTCTTCTTTTACCCATGTGTCAATATATTA 82 ************************************************************ consensus_1596#0 TTAGACCATGTTCAGATGGTAATAAAATATCCTTTGGTGTATGTGGAAGGTTTACTGGTG 180 consensus_1596#1 TTAGACCATGTTCAGATGGTAATAAAATATCCTTTGGTGTATGTGGAAGGTTTACTGGTG 142 ************************************************************ consensus_1596#0 CAGAATTACTTTCATTTTCATTAAGTGTGAGTATAGTATGCATTTGGGTACTGACTGGAC 240 consensus_1596#1 CAGAATTACTTTCATTTTCATTAAGTGTGAGTATAGTATGCATTTGGGTACTGACTGGAC 202 ************************************************************ consensus_1596#0 ATTGGCTTCTTATGGACGCAATGGGTATGGGACTATGTGTAGCATTCATTGCATTCATTC 300 consensus_1596#1 ATTGGCTTCTTATGGACGCAATGGGTATGGGACTATGTGTAGCATTCATTGCATTCATTC 262 ************************************************************ consensus_1596#0 GATTACCTAGTCTAAAGGTAGCAACTAGACCAGCAGATAATCCAGTGAATCTTG-TGGCT 359 consensus_1596#1 GATTACCTAGTCTAAAGGTATCCACCATATTATTAACTGGATTACTCATTTATGATGTCT 322 ******************** * ** * * * * * * * * * ** ** ** consensus_1596#0 AGAAGGTTGCACTTNNNTGGTGTAGCGAGAGAAGCACCAAAACTTCCATTACCTGGAAAA 419 consensus_1596#1 TCTGGGTTTTCTTTTCATCCTATAT------ATTCAGCACAAATGTAATGGTTAAGGTAG 376 **** ** * * ** * ** ** ** * ** * * consensus_1596#0 TTAGTATTTCCATCGATGCATCAAGCAGGACATTTTTCAATGTTAGGTCTTGGCGATGTT 479 consensus_1596#1 CAACTAGACCAGCAGATAATCCA------------------------------------- 399 * ** * *** ** consensus_1596#0 GTTATGCCANNACTATTGCTTTGCTTCGTTTTACGATATGACGCGTA 526 consensus_1596#1 ----------------------------------------------- |
Data build on Fri Aug 8 13:08:45 CEST 2003 by Hubert Wassner (hubert.wassner@noos.fr) |